gsm,gse,published_gse,study_title,organism,organism_taxon_id,organism_common_name,organisms,organism_taxon_ids,co_detected_organisms,xenograft,multi_species,organism_basis,organism_raw,feature_species,organ,organ_source,tissue_ontology_id,tissue_ontology_name,tissue_raw,sample_kind,disease_ontology_ids,disease_ontology_names,disease_status,disease_status_source,disease_raw,condition_raw,life_stage,life_stage_source,life_stage_luna,age_raw,sex,sex_source,sex_raw,donor_key,donor_id_raw,preservation,preservation_raw,platform,platform_basis,assay_name,assay_type,technology_raw,panel_name,instrument_software,observation_unit,n_obs,n_vars,expression_state,coordinate_units,um_per_unit,um_basis,has_image,image_stain,image_um_per_px,image_registration,segmentation,molecules,flags,qc_flags,verification,review_decision,review_category,review_notes,pubmed_ids,dois,content_group,group_kind,aliases,split,source_pipeline,sample_dir,annotation_version,annotation_confidence,annotation_low_confidence,metadata_flags
GSM3036911,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,956,25753,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM3036911,,,val,sda-all,samples/GSE111672/GSM3036911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM3405534,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,996,16528,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM3405534,,,val,sda-all,samples/GSE111672/GSM3405534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100721,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,316,19738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM4100721,,,val,sda-all,samples/GSE111672/GSM4100721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100722,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,288,19738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM4100722,,,val,sda-all,samples/GSE111672/GSM4100722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100723,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,321,19738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM4100723,,,val,sda-all,samples/GSE111672/GSM4100723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100724,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,242,19738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM4100724,,,val,sda-all,samples/GSE111672/GSM4100724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100726,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,359,19738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM4100726,,,val,sda-all,samples/GSE111672/GSM4100726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100728,GSE111672,GSE111672,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,288,19738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31932730,,GSM4100728,,,val,sda-all,samples/GSE111672/GSM4100728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM3399129,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,52,11353,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399129,,,train,sda-all,samples/GSE120374/GSM3399129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399130,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,62,11633,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399130,,,train,sda-all,samples/GSE120374/GSM3399130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.49}",disease_status;life_stage,low_confidence_annotation
GSM3399131,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,57,10784,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399131,,,train,sda-all,samples/GSE120374/GSM3399131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399132,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,54,11245,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399132,,,train,sda-all,samples/GSE120374/GSM3399132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399133,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,99,13176,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399133,,,train,sda-all,samples/GSE120374/GSM3399133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399134,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,59,11099,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399134,,,train,sda-all,samples/GSE120374/GSM3399134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM3399135,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:771,771,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,62,11652,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399135,,,train,sda-all,samples/GSE120374/GSM3399135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM3399136,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p100,male,extracted field,male,GSE120374:652,652,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,91,12391,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399136,,,train,sda-all,samples/GSE120374/GSM3399136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM3399137,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:652,652,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,97,11607,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399137,,,train,sda-all,samples/GSE120374/GSM3399137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM3399138,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p100,male,extracted field,male,GSE120374:652,652,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,99,13046,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399138,,,train,sda-all,samples/GSE120374/GSM3399138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399139,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:664,664,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,78,12955,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399139,,,train,sda-all,samples/GSE120374/GSM3399139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM3399140,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:664,664,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,81,12381,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399140,,,train,sda-all,samples/GSE120374/GSM3399140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399141,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:664,664,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,82,11596,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399141,,,train,sda-all,samples/GSE120374/GSM3399141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM3399142,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:636,636,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,89,12460,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399142,,,train,sda-all,samples/GSE120374/GSM3399142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399143,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:636,636,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,88,12385,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399143,,,train,sda-all,samples/GSE120374/GSM3399143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399144,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:672,672,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,72,12038,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399144,,,train,sda-all,samples/GSE120374/GSM3399144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM3399145,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:672,672,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,86,13040,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399145,,,train,sda-all,samples/GSE120374/GSM3399145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM3399146,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:635,635,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,87,11807,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399146,,,train,sda-all,samples/GSE120374/GSM3399146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399147,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:635,635,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,82,11193,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399147,,,train,sda-all,samples/GSE120374/GSM3399147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399148,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:635,635,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,99,12765,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399148,,,train,sda-all,samples/GSE120374/GSM3399148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399149,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:2465,2465,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,101,12631,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399149,,,train,sda-all,samples/GSE120374/GSM3399149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.42}",disease_status;life_stage,low_confidence_annotation
GSM3399150,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:2476,2476,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,138,14215,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399150,,,train,sda-all,samples/GSE120374/GSM3399150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399151,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:2476,2476,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,112,13113,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399151,,,train,sda-all,samples/GSE120374/GSM3399151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399152,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:2476,2476,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,123,13237,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399152,,,train,sda-all,samples/GSE120374/GSM3399152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399153,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:2476,2476,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,121,13591,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399153,,,train,sda-all,samples/GSE120374/GSM3399153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM3399154,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:2476,2476,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,146,13700,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399154,,,train,sda-all,samples/GSE120374/GSM3399154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM3399155,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:769,769,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,137,13678,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399155,,,train,sda-all,samples/GSE120374/GSM3399155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399156,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:769,769,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,157,13426,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399156,,,train,sda-all,samples/GSE120374/GSM3399156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399157,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:769,769,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,158,12957,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399157,,,train,sda-all,samples/GSE120374/GSM3399157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM3399158,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p100,male,extracted field,male,GSE120374:651,651,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,158,12902,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399158,,,train,sda-all,samples/GSE120374/GSM3399158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM3399159,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:651,651,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,165,13467,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399159,,,train,sda-all,samples/GSE120374/GSM3399159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM3399160,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:2524,2524,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,182,13250,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399160,,,train,sda-all,samples/GSE120374/GSM3399160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.39}",disease_status;life_stage,low_confidence_annotation
GSM3399161,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:2524,2524,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,161,13208,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399161,,,train,sda-all,samples/GSE120374/GSM3399161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.53}",disease_status;life_stage,low_confidence_annotation
GSM3399162,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:2524,2524,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,107,12777,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399162,,,train,sda-all,samples/GSE120374/GSM3399162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM3399163,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1055,1055,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,258,13707,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399163,,,train,sda-all,samples/GSE120374/GSM3399163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM3399164,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1055,1055,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,270,13822,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399164,,,train,sda-all,samples/GSE120374/GSM3399164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM3399165,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1056,1056,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,151,14217,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399165,,,train,sda-all,samples/GSE120374/GSM3399165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399166,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1056,1056,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,161,15064,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399166,,,train,sda-all,samples/GSE120374/GSM3399166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM3399167,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1056,1056,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,179,14970,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399167,,,train,sda-all,samples/GSE120374/GSM3399167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM3399168,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1057,1057,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,268,15313,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399168,,,train,sda-all,samples/GSE120374/GSM3399168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399169,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1057,1057,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,243,14577,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399169,,,train,sda-all,samples/GSE120374/GSM3399169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.79}",,
GSM3399170,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1057,1057,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,186,14632,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399170,,,train,sda-all,samples/GSE120374/GSM3399170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399171,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1057,1057,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,198,14227,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399171,,,train,sda-all,samples/GSE120374/GSM3399171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM3399172,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1058,1058,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,301,14047,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399172,,,train,sda-all,samples/GSE120374/GSM3399172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM3399173,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1058,1058,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,220,13528,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399173,,,train,sda-all,samples/GSE120374/GSM3399173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399174,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:973,973,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,272,14618,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399174,,,train,sda-all,samples/GSE120374/GSM3399174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399175,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:974,974,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,273,14023,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399175,,,train,sda-all,samples/GSE120374/GSM3399175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM3399176,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1087,1087,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,157,15349,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399176,,,train,sda-all,samples/GSE120374/GSM3399176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM3399177,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1087,1087,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,173,15398,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399177,,,train,sda-all,samples/GSE120374/GSM3399177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399178,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1087,1087,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,355,15627,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399178,,,train,sda-all,samples/GSE120374/GSM3399178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.45}",disease_status;life_stage,low_confidence_annotation
GSM3399179,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1087,1087,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,299,14635,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399179,,,train,sda-all,samples/GSE120374/GSM3399179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM3399180,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:975,975,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,301,15189,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399180,,,train,sda-all,samples/GSE120374/GSM3399180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399181,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:975,975,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,372,14900,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399181,,,train,sda-all,samples/GSE120374/GSM3399181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399182,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:975,975,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,405,14837,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399182,,,train,sda-all,samples/GSE120374/GSM3399182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM3399183,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:975,975,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,305,14866,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399183,,,train,sda-all,samples/GSE120374/GSM3399183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399184,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:975,975,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,322,14831,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399184,,,train,sda-all,samples/GSE120374/GSM3399184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399185,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:976,976,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,231,13684,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399185,,,train,sda-all,samples/GSE120374/GSM3399185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM3399186,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:976,976,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,240,14310,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399186,,,train,sda-all,samples/GSE120374/GSM3399186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399187,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:976,976,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,259,13840,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399187,,,train,sda-all,samples/GSE120374/GSM3399187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM3399188,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:976,976,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,262,14390,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399188,,,train,sda-all,samples/GSE120374/GSM3399188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399189,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1037,1037,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,349,13544,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399189,,,train,sda-all,samples/GSE120374/GSM3399189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399190,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1040,1040,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,320,14282,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399190,,,train,sda-all,samples/GSE120374/GSM3399190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399191,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1040,1040,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,238,14169,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399191,,,train,sda-all,samples/GSE120374/GSM3399191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399192,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1241,1241,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,344,15413,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399192,,,train,sda-all,samples/GSE120374/GSM3399192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM3399193,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,neonatal or infant,p70,female,extracted field,female,GSE120374:1241,1241,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,307,15682,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399193,,,train,sda-all,samples/GSE120374/GSM3399193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399194,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1241,1241,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,288,15368,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399194,,,train,sda-all,samples/GSE120374/GSM3399194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM3399195,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1241,1241,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,232,15033,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399195,,,train,sda-all,samples/GSE120374/GSM3399195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM3399196,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1241,1241,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,241,15268,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399196,,,train,sda-all,samples/GSE120374/GSM3399196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM3399197,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,neonatal or infant,p70,female,extracted field,female,GSE120374:1241,1241,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,219,14911,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399197,,,train,sda-all,samples/GSE120374/GSM3399197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM3399198,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1277,1277,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,197,15408,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399198,,,train,sda-all,samples/GSE120374/GSM3399198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM3399199,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1277,1277,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,219,14699,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399199,,,train,sda-all,samples/GSE120374/GSM3399199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM3399200,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1277,1277,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,108,15510,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399200,,,train,sda-all,samples/GSE120374/GSM3399200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399201,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1277,1277,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,124,15082,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399201,,,train,sda-all,samples/GSE120374/GSM3399201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM3399202,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1277,1277,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,147,15170,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399202,,,train,sda-all,samples/GSE120374/GSM3399202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM3399203,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:1298,1298,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,270,15857,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399203,,,train,sda-all,samples/GSE120374/GSM3399203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM3399204,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:1298,1298,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,200,15800,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399204,,,train,sda-all,samples/GSE120374/GSM3399204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM3399205,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:1298,1298,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,236,16181,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399205,,,train,sda-all,samples/GSE120374/GSM3399205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.64}",disease_status,low_confidence_annotation
GSM3399206,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:1298,1298,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,253,14949,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399206,,,train,sda-all,samples/GSE120374/GSM3399206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399207,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:1298,1298,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,316,15971,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399207,,,train,sda-all,samples/GSE120374/GSM3399207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM3399208,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:1294,1294,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,211,15258,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399208,,,train,sda-all,samples/GSE120374/GSM3399208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399209,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:1294,1294,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,221,14976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399209,,,train,sda-all,samples/GSE120374/GSM3399209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM3399210,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:1294,1294,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,234,15647,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399210,,,train,sda-all,samples/GSE120374/GSM3399210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM3399211,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:1294,1294,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,215,14788,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399211,,,train,sda-all,samples/GSE120374/GSM3399211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM3399212,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:1294,1294,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,237,15393,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399212,,,train,sda-all,samples/GSE120374/GSM3399212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399213,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:1294,1294,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,269,14854,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399213,,,train,sda-all,samples/GSE120374/GSM3399213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.66}",disease_status,low_confidence_annotation
GSM3399214,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1248,1248,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,281,14902,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399214,,,train,sda-all,samples/GSE120374/GSM3399214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM3399215,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:1244,1244,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,195,15430,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399215,,,train,sda-all,samples/GSE120374/GSM3399215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399216,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:1244,1244,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,273,15845,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399216,,,train,sda-all,samples/GSE120374/GSM3399216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM3399217,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:1244,1244,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,243,15712,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399217,,,train,sda-all,samples/GSE120374/GSM3399217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM3399218,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:1244,1244,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,246,15323,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399218,,,train,sda-all,samples/GSE120374/GSM3399218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM3399219,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p100,female,extracted field,female,GSE120374:1244,1244,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,253,15834,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399219,,,train,sda-all,samples/GSE120374/GSM3399219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM3399220,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1250,1250,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,308,16136,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399220,,,train,sda-all,samples/GSE120374/GSM3399220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399221,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1250,1250,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,242,15948,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399221,,,train,sda-all,samples/GSE120374/GSM3399221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399222,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1250,1250,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,252,16036,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399222,,,train,sda-all,samples/GSE120374/GSM3399222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399223,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,neonatal or infant,p70,male,extracted field,male,GSE120374:1250,1250,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,283,15357,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399223,,,train,sda-all,samples/GSE120374/GSM3399223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM3399224,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1250,1250,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,240,13868,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399224,,,train,sda-all,samples/GSE120374/GSM3399224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM3399225,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1250,1250,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,319,14545,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399225,,,train,sda-all,samples/GSE120374/GSM3399225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM3399226,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:1245,1245,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,334,14146,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399226,,,train,sda-all,samples/GSE120374/GSM3399226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399227,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p100,female,extracted field,female,GSE120374:1245,1245,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,238,13789,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399227,,,train,sda-all,samples/GSE120374/GSM3399227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.26}",disease_status;life_stage,low_confidence_annotation
GSM3399228,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1238,1238,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,304,14662,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399228,,,train,sda-all,samples/GSE120374/GSM3399228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM3399229,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1238,1238,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,340,14685,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399229,,,train,sda-all,samples/GSE120374/GSM3399229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399230,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1238,1238,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,204,14855,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399230,,,train,sda-all,samples/GSE120374/GSM3399230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399231,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,neonatal or infant,p70,male,extracted field,male,GSE120374:1238,1238,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,250,14120,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399231,,,train,sda-all,samples/GSE120374/GSM3399231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM3399232,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1265,1265,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,337,15385,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399232,,,train,sda-all,samples/GSE120374/GSM3399232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM3399233,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1265,1265,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,342,14794,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399233,,,train,sda-all,samples/GSE120374/GSM3399233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399234,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1265,1265,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,290,15355,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399234,,,train,sda-all,samples/GSE120374/GSM3399234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM3399235,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1080,1080,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,275,15467,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399235,,,train,sda-all,samples/GSE120374/GSM3399235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399236,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1080,1080,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,325,15389,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399236,,,train,sda-all,samples/GSE120374/GSM3399236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM3399237,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,272,14572,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399237,,,train,sda-all,samples/GSE120374/GSM3399237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.67}",,
GSM3399238,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,310,14416,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399238,,,train,sda-all,samples/GSE120374/GSM3399238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM3399239,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,359,14745,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399239,,,train,sda-all,samples/GSE120374/GSM3399239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399240,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,311,15051,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399240,,,train,sda-all,samples/GSE120374/GSM3399240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM3399241,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,304,14949,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399241,,,train,sda-all,samples/GSE120374/GSM3399241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399242,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,239,14660,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399242,,,train,sda-all,samples/GSE120374/GSM3399242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM3399243,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,312,14847,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399243,,,train,sda-all,samples/GSE120374/GSM3399243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM3399244,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,287,14636,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399244,,,train,sda-all,samples/GSE120374/GSM3399244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399245,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,351,14674,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399245,,,train,sda-all,samples/GSE120374/GSM3399245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM3399246,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1266,1266,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,273,14568,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399246,,,train,sda-all,samples/GSE120374/GSM3399246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399247,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,276,14501,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399247,,,train,sda-all,samples/GSE120374/GSM3399247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM3399248,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,215,14343,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399248,,,train,sda-all,samples/GSE120374/GSM3399248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM3399249,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,301,14565,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399249,,,train,sda-all,samples/GSE120374/GSM3399249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399250,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,247,14324,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399250,,,train,sda-all,samples/GSE120374/GSM3399250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399251,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,260,14750,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399251,,,train,sda-all,samples/GSE120374/GSM3399251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.67}",,
GSM3399252,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,298,15084,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399252,,,train,sda-all,samples/GSE120374/GSM3399252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM3399253,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,287,14912,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399253,,,train,sda-all,samples/GSE120374/GSM3399253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM3399254,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,280,14308,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399254,,,train,sda-all,samples/GSE120374/GSM3399254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM3399255,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1351,1351,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,312,14991,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399255,,,train,sda-all,samples/GSE120374/GSM3399255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM3399256,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,299,14877,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399256,,,train,sda-all,samples/GSE120374/GSM3399256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399257,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,277,14514,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399257,,,train,sda-all,samples/GSE120374/GSM3399257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399258,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,272,13902,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399258,,,train,sda-all,samples/GSE120374/GSM3399258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM3399259,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,270,14524,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399259,,,train,sda-all,samples/GSE120374/GSM3399259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM3399260,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,289,14518,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399260,,,train,sda-all,samples/GSE120374/GSM3399260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM3399261,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,280,14646,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399261,,,train,sda-all,samples/GSE120374/GSM3399261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399262,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,183,14675,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399262,,,train,sda-all,samples/GSE120374/GSM3399262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM3399263,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,256,14387,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399263,,,train,sda-all,samples/GSE120374/GSM3399263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM3399264,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,221,14596,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399264,,,train,sda-all,samples/GSE120374/GSM3399264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399265,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:998,998,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,206,14762,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399265,,,train,sda-all,samples/GSE120374/GSM3399265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399266,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,381,14764,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399266,,,train,sda-all,samples/GSE120374/GSM3399266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM3399267,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,244,14509,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399267,,,train,sda-all,samples/GSE120374/GSM3399267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM3399268,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,331,14553,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399268,,,train,sda-all,samples/GSE120374/GSM3399268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM3399269,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,344,14644,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399269,,,train,sda-all,samples/GSE120374/GSM3399269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399270,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,330,14594,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399270,,,train,sda-all,samples/GSE120374/GSM3399270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM3399271,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,270,14526,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399271,,,train,sda-all,samples/GSE120374/GSM3399271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.45}",disease_status;life_stage,low_confidence_annotation
GSM3399272,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,396,14149,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399272,,,train,sda-all,samples/GSE120374/GSM3399272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM3399273,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,333,14521,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399273,,,train,sda-all,samples/GSE120374/GSM3399273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM3399274,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,326,14264,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399274,,,train,sda-all,samples/GSE120374/GSM3399274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399275,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1083,1083,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,226,14426,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399275,,,train,sda-all,samples/GSE120374/GSM3399275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.32}",disease_status;life_stage,low_confidence_annotation
GSM3399276,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1473,1473,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,259,13471,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399276,,,train,sda-all,samples/GSE120374/GSM3399276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM3399277,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1352,1352,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,295,14245,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399277,,,train,sda-all,samples/GSE120374/GSM3399277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399278,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1352,1352,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,211,14557,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399278,,,train,sda-all,samples/GSE120374/GSM3399278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399279,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:1352,1352,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,285,13998,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399279,,,train,sda-all,samples/GSE120374/GSM3399279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399280,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:1305,1305,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,326,13971,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399280,,,train,sda-all,samples/GSE120374/GSM3399280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM3399281,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1542,1542,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,306,16316,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399281,,,train,sda-all,samples/GSE120374/GSM3399281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM3399282,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1542,1542,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,215,16014,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399282,,,train,sda-all,samples/GSE120374/GSM3399282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399283,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1542,1542,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,285,16181,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399283,,,train,sda-all,samples/GSE120374/GSM3399283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM3399284,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1542,1542,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,311,15912,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399284,,,train,sda-all,samples/GSE120374/GSM3399284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399285,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1542,1542,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,277,15752,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399285,,,train,sda-all,samples/GSE120374/GSM3399285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399286,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1542,1542,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,303,15881,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399286,,,train,sda-all,samples/GSE120374/GSM3399286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM3399287,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,296,16258,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399287,,,train,sda-all,samples/GSE120374/GSM3399287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399288,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,224,16086,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399288,,,train,sda-all,samples/GSE120374/GSM3399288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399289,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,266,16343,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399289,,,train,sda-all,samples/GSE120374/GSM3399289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399290,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,302,16070,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399290,,,train,sda-all,samples/GSE120374/GSM3399290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM3399291,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,224,15869,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399291,,,train,sda-all,samples/GSE120374/GSM3399291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM3399292,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,251,15685,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399292,,,train,sda-all,samples/GSE120374/GSM3399292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM3399293,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,297,16266,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399293,,,train,sda-all,samples/GSE120374/GSM3399293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399294,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:1310,1310,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,267,16164,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399294,,,train,sda-all,samples/GSE120374/GSM3399294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399295,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:2967,2967,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,292,15622,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399295,,,train,sda-all,samples/GSE120374/GSM3399295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399296,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:2967,2967,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,310,15688,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399296,,,train,sda-all,samples/GSE120374/GSM3399296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399297,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:2967,2967,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,293,15518,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399297,,,train,sda-all,samples/GSE120374/GSM3399297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM3399298,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:2967,2967,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,328,15401,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399298,,,train,sda-all,samples/GSE120374/GSM3399298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399299,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:2967,2967,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,304,15454,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399299,,,train,sda-all,samples/GSE120374/GSM3399299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM3399300,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:2967,2967,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,282,15298,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399300,,,train,sda-all,samples/GSE120374/GSM3399300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399301,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1486,1486,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,289,15303,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399301,,,train,sda-all,samples/GSE120374/GSM3399301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.56}",disease_status;life_stage,low_confidence_annotation
GSM3399302,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1486,1486,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,311,15148,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399302,,,train,sda-all,samples/GSE120374/GSM3399302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399303,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1486,1486,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,309,15154,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399303,,,train,sda-all,samples/GSE120374/GSM3399303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM3399304,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1486,1486,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,323,14981,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399304,,,train,sda-all,samples/GSE120374/GSM3399304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM3399305,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1486,1486,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,271,15219,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399305,,,train,sda-all,samples/GSE120374/GSM3399305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM3399306,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,adult,age rule: postnatal day,juvenile,p70,male,extracted field,male,GSE120374:1486,1486,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,309,14491,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399306,,,train,sda-all,samples/GSE120374/GSM3399306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.67}",disease_status,low_confidence_annotation
GSM3399307,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3167,3167,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,250,16149,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399307,,,train,sda-all,samples/GSE120374/GSM3399307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM3399308,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3167,3167,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,212,15784,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399308,,,train,sda-all,samples/GSE120374/GSM3399308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399309,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3167,3167,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,275,16033,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399309,,,train,sda-all,samples/GSE120374/GSM3399309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399310,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3167,3167,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,244,15563,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399310,,,train,sda-all,samples/GSE120374/GSM3399310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM3399311,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3167,3167,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,282,15761,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399311,,,train,sda-all,samples/GSE120374/GSM3399311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.64}",disease_status,low_confidence_annotation
GSM3399312,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3167,3167,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,289,15776,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399312,,,train,sda-all,samples/GSE120374/GSM3399312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM3399313,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1394,1394,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,262,16397,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399313,,,train,sda-all,samples/GSE120374/GSM3399313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399314,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1394,1394,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,238,15856,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399314,,,train,sda-all,samples/GSE120374/GSM3399314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399315,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1394,1394,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,309,16480,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399315,,,train,sda-all,samples/GSE120374/GSM3399315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399316,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1394,1394,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,306,15970,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399316,,,train,sda-all,samples/GSE120374/GSM3399316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM3399317,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1394,1394,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,305,16411,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399317,,,train,sda-all,samples/GSE120374/GSM3399317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399318,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1394,1394,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,352,16036,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399318,,,train,sda-all,samples/GSE120374/GSM3399318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399319,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1396,1396,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,278,16898,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399319,,,train,sda-all,samples/GSE120374/GSM3399319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399320,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1396,1396,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,328,16866,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399320,,,train,sda-all,samples/GSE120374/GSM3399320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399321,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1396,1396,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,278,16706,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399321,,,train,sda-all,samples/GSE120374/GSM3399321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399322,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1396,1396,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,335,16560,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399322,,,train,sda-all,samples/GSE120374/GSM3399322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399323,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:1396,1396,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,303,16368,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399323,,,train,sda-all,samples/GSE120374/GSM3399323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399324,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,367,16475,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399324,,,train,sda-all,samples/GSE120374/GSM3399324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399325,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,341,16491,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399325,,,train,sda-all,samples/GSE120374/GSM3399325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399326,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,336,16299,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399326,,,train,sda-all,samples/GSE120374/GSM3399326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399327,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,353,16180,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399327,,,train,sda-all,samples/GSE120374/GSM3399327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM3399328,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,259,16123,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399328,,,train,sda-all,samples/GSE120374/GSM3399328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399329,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,251,15612,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399329,,,train,sda-all,samples/GSE120374/GSM3399329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399330,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,375,16569,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399330,,,train,sda-all,samples/GSE120374/GSM3399330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399331,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,340,16348,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399331,,,train,sda-all,samples/GSE120374/GSM3399331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399332,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,346,15648,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399332,,,train,sda-all,samples/GSE120374/GSM3399332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399333,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,375,15759,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399333,,,train,sda-all,samples/GSE120374/GSM3399333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399334,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,270,15166,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399334,,,train,sda-all,samples/GSE120374/GSM3399334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399335,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3163,3163,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,285,15393,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399335,,,train,sda-all,samples/GSE120374/GSM3399335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399336,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3153,3153,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,337,16359,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399336,,,train,sda-all,samples/GSE120374/GSM3399336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399337,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3153,3153,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,296,15856,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399337,,,train,sda-all,samples/GSE120374/GSM3399337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399338,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3153,3153,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,313,16396,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399338,,,train,sda-all,samples/GSE120374/GSM3399338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399339,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3153,3153,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,348,15638,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399339,,,train,sda-all,samples/GSE120374/GSM3399339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM3399340,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3153,3153,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,320,15949,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399340,,,train,sda-all,samples/GSE120374/GSM3399340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399341,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3153,3153,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,293,15526,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399341,,,train,sda-all,samples/GSE120374/GSM3399341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399342,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3147,3147,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,380,16815,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399342,,,train,sda-all,samples/GSE120374/GSM3399342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399343,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3147,3147,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,327,16072,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399343,,,train,sda-all,samples/GSE120374/GSM3399343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399344,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3147,3147,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,410,16454,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399344,,,train,sda-all,samples/GSE120374/GSM3399344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399345,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3147,3147,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,370,16345,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399345,,,train,sda-all,samples/GSE120374/GSM3399345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM3399346,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3147,3147,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,373,16578,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399346,,,train,sda-all,samples/GSE120374/GSM3399346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM3399347,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:3147,3147,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,426,16376,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399347,,,train,sda-all,samples/GSE120374/GSM3399347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM3399348,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3162,3162,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,264,16425,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399348,,,train,sda-all,samples/GSE120374/GSM3399348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM3399349,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3162,3162,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,248,15859,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399349,,,train,sda-all,samples/GSE120374/GSM3399349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM3399350,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3162,3162,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,317,16074,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399350,,,train,sda-all,samples/GSE120374/GSM3399350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399351,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3162,3162,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,304,15830,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399351,,,train,sda-all,samples/GSE120374/GSM3399351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM3399352,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3162,3162,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,281,15964,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399352,,,train,sda-all,samples/GSE120374/GSM3399352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM3399353,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,male,extracted field,male,GSE120374:3162,3162,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,291,15671,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399353,,,train,sda-all,samples/GSE120374/GSM3399353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399354,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,315,16475,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399354,,,train,sda-all,samples/GSE120374/GSM3399354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399355,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,274,16537,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399355,,,train,sda-all,samples/GSE120374/GSM3399355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399356,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,323,15799,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399356,,,train,sda-all,samples/GSE120374/GSM3399356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399357,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,291,15172,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399357,,,train,sda-all,samples/GSE120374/GSM3399357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM3399358,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,316,16112,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399358,,,train,sda-all,samples/GSE120374/GSM3399358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399359,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,302,16605,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399359,,,train,sda-all,samples/GSE120374/GSM3399359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM3399360,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,257,15908,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399360,,,train,sda-all,samples/GSE120374/GSM3399360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399361,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,289,16128,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399361,,,train,sda-all,samples/GSE120374/GSM3399361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399362,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,325,15888,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399362,,,train,sda-all,samples/GSE120374/GSM3399362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM3399363,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,271,14728,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399363,,,train,sda-all,samples/GSE120374/GSM3399363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM3399364,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3159,3159,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,324,17723,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399364,,,train,sda-all,samples/GSE120374/GSM3399364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399365,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,336,16466,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399365,,,train,sda-all,samples/GSE120374/GSM3399365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399366,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,290,16028,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399366,,,train,sda-all,samples/GSE120374/GSM3399366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399367,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,320,15997,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399367,,,train,sda-all,samples/GSE120374/GSM3399367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM3399368,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,280,15567,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399368,,,train,sda-all,samples/GSE120374/GSM3399368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399369,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,308,16071,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399369,,,train,sda-all,samples/GSE120374/GSM3399369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM3399370,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,332,16400,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399370,,,train,sda-all,samples/GSE120374/GSM3399370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM3399371,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,308,16656,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399371,,,train,sda-all,samples/GSE120374/GSM3399371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.45}",disease_status;life_stage,low_confidence_annotation
GSM3399372,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,323,16738,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399372,,,train,sda-all,samples/GSE120374/GSM3399372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM3399373,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,male,extracted field,male,GSE120374:3172,3172,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,327,16483,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399373,,,train,sda-all,samples/GSE120374/GSM3399373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399374,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,345,16840,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399374,,,train,sda-all,samples/GSE120374/GSM3399374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399375,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,328,16750,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399375,,,train,sda-all,samples/GSE120374/GSM3399375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399376,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,348,16363,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399376,,,train,sda-all,samples/GSE120374/GSM3399376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399377,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,324,16254,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399377,,,train,sda-all,samples/GSE120374/GSM3399377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399378,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,328,15232,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399378,,,train,sda-all,samples/GSE120374/GSM3399378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM3399379,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,331,15747,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399379,,,train,sda-all,samples/GSE120374/GSM3399379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399380,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3146,3146,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,322,16509,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399380,,,train,sda-all,samples/GSE120374/GSM3399380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399381,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,283,15675,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399381,,,train,sda-all,samples/GSE120374/GSM3399381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM3399382,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,308,15608,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399382,,,train,sda-all,samples/GSE120374/GSM3399382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM3399383,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,305,16015,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399383,,,train,sda-all,samples/GSE120374/GSM3399383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399384,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,320,16632,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399384,,,train,sda-all,samples/GSE120374/GSM3399384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399385,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,262,15196,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399385,,,train,sda-all,samples/GSE120374/GSM3399385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM3399386,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,260,15155,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399386,,,train,sda-all,samples/GSE120374/GSM3399386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM3399387,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,303,15375,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399387,,,train,sda-all,samples/GSE120374/GSM3399387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399388,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,243,14488,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399388,,,train,sda-all,samples/GSE120374/GSM3399388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399389,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,303,15361,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399389,,,train,sda-all,samples/GSE120374/GSM3399389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399390,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p120,female,extracted field,female,GSE120374:3150,3150,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,258,15830,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399390,,,train,sda-all,samples/GSE120374/GSM3399390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399391,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,250,14780,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399391,,,train,sda-all,samples/GSE120374/GSM3399391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM3399392,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,242,15047,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399392,,,train,sda-all,samples/GSE120374/GSM3399392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM3399393,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,393,16980,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399393,,,train,sda-all,samples/GSE120374/GSM3399393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM3399394,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,306,16710,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399394,,,train,sda-all,samples/GSE120374/GSM3399394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM3399395,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,380,16428,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399395,,,train,sda-all,samples/GSE120374/GSM3399395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399396,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,297,16680,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399396,,,train,sda-all,samples/GSE120374/GSM3399396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399397,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,268,15979,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399397,,,train,sda-all,samples/GSE120374/GSM3399397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399398,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,212,16822,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399398,,,train,sda-all,samples/GSE120374/GSM3399398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.79}",,
GSM3399399,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,340,15761,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399399,,,train,sda-all,samples/GSE120374/GSM3399399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399400,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,223,15581,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399400,,,train,sda-all,samples/GSE120374/GSM3399400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM3399401,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,246,15400,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399401,,,train,sda-all,samples/GSE120374/GSM3399401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399402,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A16,A16,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,235,15670,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399402,,,train,sda-all,samples/GSE120374/GSM3399402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399403,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,306,16148,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399403,,,train,sda-all,samples/GSE120374/GSM3399403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM3399404,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,321,15742,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399404,,,train,sda-all,samples/GSE120374/GSM3399404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399405,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,305,16230,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399405,,,train,sda-all,samples/GSE120374/GSM3399405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM3399406,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,286,16286,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399406,,,train,sda-all,samples/GSE120374/GSM3399406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM3399407,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,juvenile,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,304,16348,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399407,,,train,sda-all,samples/GSE120374/GSM3399407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.53}",disease_status;life_stage,low_confidence_annotation
GSM3399408,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),adult,age rule: postnatal day,adult,p100,female,extracted field,female,GSE120374:A12,A12,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,289,16279,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399408,,,train,sda-all,samples/GSE120374/GSM3399408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.8}",disease_status,low_confidence_annotation
GSM3399409,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:S4,S4,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,248,14996,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399409,,,train,sda-all,samples/GSE120374/GSM3399409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399410,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:S4,S4,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,191,15007,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399410,,,train,sda-all,samples/GSE120374/GSM3399410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399411,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:S4,S4,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,272,14748,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399411,,,train,sda-all,samples/GSE120374/GSM3399411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM3399412,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:S4,S4,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,235,15177,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399412,,,train,sda-all,samples/GSE120374/GSM3399412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM3399413,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:S4,S4,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,210,14638,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399413,,,train,sda-all,samples/GSE120374/GSM3399413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.5}",disease_status;life_stage,low_confidence_annotation
GSM3399414,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:S4,S4,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,265,14766,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399414,,,train,sda-all,samples/GSE120374/GSM3399414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM3399415,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1059,1059,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,249,15193,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399415,,,train,sda-all,samples/GSE120374/GSM3399415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399416,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1059,1059,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,212,15522,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399416,,,train,sda-all,samples/GSE120374/GSM3399416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399417,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1059,1059,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,202,15195,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399417,,,train,sda-all,samples/GSE120374/GSM3399417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM3399418,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1059,1059,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,159,15319,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399418,,,train,sda-all,samples/GSE120374/GSM3399418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.74}",,
GSM3399419,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,female,extracted field,female,GSE120374:1059,1059,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,208,14506,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399419,,,train,sda-all,samples/GSE120374/GSM3399419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM3399420,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:1059,1059,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,191,15315,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399420,,,train,sda-all,samples/GSE120374/GSM3399420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM3399421,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1453,1453,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,318,15771,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399421,,,train,sda-all,samples/GSE120374/GSM3399421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399422,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,neonatal or infant,p70,female,extracted field,female,GSE120374:1453,1453,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,301,16088,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399422,,,train,sda-all,samples/GSE120374/GSM3399422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399423,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1453,1453,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,205,16139,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399423,,,train,sda-all,samples/GSE120374/GSM3399423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399424,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,neonatal or infant,p70,female,extracted field,female,GSE120374:1453,1453,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,194,15723,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399424,,,train,sda-all,samples/GSE120374/GSM3399424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399425,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,neonatal or infant,p70,female,extracted field,female,GSE120374:1453,1453,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,236,16161,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399425,,,train,sda-all,samples/GSE120374/GSM3399425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM3399426,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,adult,age rule: postnatal day,juvenile,p70,female,extracted field,female,GSE120374:1453,1453,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,234,16361,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399426,,,train,sda-all,samples/GSE120374/GSM3399426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399427,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0009,M0009,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,292,14634,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399427,,,train,sda-all,samples/GSE120374/GSM3399427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM3399428,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:M0009,M0009,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,287,16087,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399428,,,train,sda-all,samples/GSE120374/GSM3399428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399429,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0009,M0009,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,210,14795,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399429,,,train,sda-all,samples/GSE120374/GSM3399429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399430,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0009,M0009,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,218,16003,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399430,,,train,sda-all,samples/GSE120374/GSM3399430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM3399431,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:M0009,M0009,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,135,15847,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399431,,,train,sda-all,samples/GSE120374/GSM3399431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.62}",,
GSM3399432,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,239,14606,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399432,,,train,sda-all,samples/GSE120374/GSM3399432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM3399433,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,252,15109,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399433,,,train,sda-all,samples/GSE120374/GSM3399433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM3399434,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,151,12886,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399434,,,train,sda-all,samples/GSE120374/GSM3399434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399435,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,236,15315,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399435,,,train,sda-all,samples/GSE120374/GSM3399435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM3399436,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,142,15932,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399436,,,train,sda-all,samples/GSE120374/GSM3399436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM3399437,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,181,16362,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399437,,,train,sda-all,samples/GSE120374/GSM3399437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM3399438,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,130,15688,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399438,,,train,sda-all,samples/GSE120374/GSM3399438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399439,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,juvenile,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,160,16416,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399439,,,train,sda-all,samples/GSE120374/GSM3399439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399440,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,luna,,B6SJLSOD1-G93A,juvenile,age rule: postnatal day,neonatal or infant,p30,male,extracted field,male,GSE120374:M0010,M0010,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,138,15997,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399440,,,train,sda-all,samples/GSE120374/GSM3399440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399441,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:M0224,M0224,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,269,15677,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399441,,,train,sda-all,samples/GSE120374/GSM3399441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM3399442,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:M0224,M0224,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,209,15966,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399442,,,train,sda-all,samples/GSE120374/GSM3399442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM3399443,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:M0224,M0224,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,258,16449,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399443,,,train,sda-all,samples/GSE120374/GSM3399443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399444,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:M0224,M0224,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,216,16308,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399444,,,train,sda-all,samples/GSE120374/GSM3399444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399445,GSE120374,GSE120374,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,B6SJLSOD1-WT,juvenile,age rule: postnatal day,juvenile,p30,female,extracted field,female,GSE120374:M0224,M0224,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,295,16576,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM3399445,,,train,sda-all,samples/GSE120374/GSM3399445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.62}",,
GSM4067523,GSE130682,GSE130682,High-density spatial transcriptomics arrays for in situ tissue profiling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,unknown,not stated,,,,,,Other,release v3,HDST,sequencing-based,High-density spatial transcriptomics arrays,,,,113429,14198,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,31501547,,GSM4067523,,,train,hesrt,samples/GSE130682/GSM4067523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4030472,GSE135805,GSE135805,Spatial Transcriptomics of Human Cardiac Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Cardiac biopsy (transplantation),primary tissue,,,normal,luna,,Normal control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,902,4029,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31862877,,GSM4030472,,,train,sda-all,samples/GSE135805/GSM4030472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM4030473,GSE135805,GSE135805,Spatial Transcriptomics of Human Cardiac Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Cardiac biopsy (explanted),primary tissue,MONDO:0004994,cardiomyopathy,disease,luna,ischemic cardiomyopathy,ischemic cardiomyopathy patient,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,958,10488,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31862877,,GSM4030473,,,train,sda-all,samples/GSE135805/GSM4030473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM4030474,GSE135805,GSE135805,Spatial Transcriptomics of Human Cardiac Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Cardiac biopsy (explanted),primary tissue,MONDO:0005021,dilated cardiomyopathy,disease,luna,dilated cardiomyopathy,dilated cardiomyopathy patient,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,934,4741,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31862877,,GSM4030474,,,train,sda-all,samples/GSE135805/GSM4030474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4030475,GSE135805,GSE135805,Spatial Transcriptomics of Human Cardiac Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Cardiac biopsy (explanted),primary tissue,MONDO:0005045,hypertrophic cardiomyopathy,disease,luna,hypertrophic cardiomyopathy,hypertrophic cardiomyopathy patient,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,958,12734,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,31862877,,GSM4030475,,,train,sda-all,samples/GSE135805/GSM4030475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4096261,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 10,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,22969,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4096261,,,train,sda-all,samples/GSE137986/GSM4096261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4096262,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 10,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,936,22802,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4096262,,,train,sda-all,samples/GSE137986/GSM4096262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189611,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 10,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,902,22243,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4189611,,,train,sda-all,samples/GSE137986/GSM4189611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189612,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 12,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1667,22571,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4189612,,,train,sda-all,samples/GSE137986/GSM4189612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189613,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 10,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,901,22846,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4189613,,,train,sda-all,samples/GSE137986/GSM4189613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189614,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 10,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1789,18787,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4189614,,,train,sda-all,samples/GSE137986/GSM4189614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189615,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 10,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,20268,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4189615,,,train,sda-all,samples/GSE137986/GSM4189615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364242,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic Day 11,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1837,20849,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4364242,,,train,sda-all,samples/GSE137986/GSM4364242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364243,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic Day 11,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1662,21890,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4364243,,,train,sda-all,samples/GSE137986/GSM4364243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364244,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic Day 11,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1840,21337,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4364244,,,train,sda-all,samples/GSE137986/GSM4364244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364245,GSE137986,GSE137986,High spatial resolution multi-omics atlas sequencing of mouse embryos,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic Day 11,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2109,20257,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,33188776,,GSM4364245,,,train,sda-all,samples/GSE137986/GSM4364245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4284316,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P2,P2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,666,17138,counts,pixel,0.7614931074304077,platform_constant,True,H&E,0.7614931074304077,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284316,,,train,hesrt,samples/GSE144239/GSM4284316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM4284317,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P2,P2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,646,17344,counts,pixel,0.7626040359088069,platform_constant,True,H&E,0.7626040359088069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284317,,,train,hesrt,samples/GSE144239/GSM4284317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284318,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P2,P2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,638,17883,counts,pixel,0.7617104538561993,platform_constant,True,H&E,0.7617104538561993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284318,,,train,hesrt,samples/GSE144239/GSM4284318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284319,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P5,P5,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,590,16959,counts,pixel,0.7637965829214848,platform_constant,True,H&E,0.7637965829214848,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284319,,,train,hesrt,samples/GSE144239/GSM4284319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284320,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P5,P5,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,521,17689,counts,pixel,0.7617486280738048,platform_constant,True,H&E,0.7617486280738048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284320,,,train,hesrt,samples/GSE144239/GSM4284320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM4284321,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P5,P5,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,521,17399,counts,pixel,0.7617486280738048,platform_constant,True,H&E,0.7617486280738048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284321,,,train,hesrt,samples/GSE144239/GSM4284321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM4284322,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P9,P9,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1145,17823,counts,pixel,0.7605539208662603,platform_constant,True,H&E,0.7605539208662603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284322,,,train,hesrt,samples/GSE144239/GSM4284322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284323,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P9,P9,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1071,19314,counts,pixel,0.7609436740774449,platform_constant,True,H&E,0.7609436740774449,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284323,,,train,hesrt,samples/GSE144239/GSM4284323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM4284324,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P9,P9,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1182,17976,counts,pixel,0.7607692514864337,platform_constant,True,H&E,0.7607692514864337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284324,,,train,hesrt,samples/GSE144239/GSM4284324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM4284325,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P10,P10,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,608,15383,counts,pixel,0.7609618777824206,platform_constant,True,H&E,0.7609618777824206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284325,,,train,hesrt,samples/GSE144239/GSM4284325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284326,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P10,P10,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,621,16642,counts,pixel,0.7618187520677493,platform_constant,True,H&E,0.7618187520677493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284326,,,train,hesrt,samples/GSE144239/GSM4284326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284327,GSE144239+GSE144240,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P10,P10,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,462,17047,counts,pixel,0.7587550710493794,platform_constant,True,H&E,0.7587550710493794,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284327,,,train,hesrt,samples/GSE144239/GSM4284327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM4565823,GSE144239,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P4,P4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,744,33538,counts,pixel,4.538375052218066,platform_constant,True,H&E,4.538375052218066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565823,,,train,hesrt,samples/GSE144239/GSM4565823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM4565824,GSE144239,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P4,P4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,696,33538,counts,pixel,4.538375052218043,platform_constant,True,H&E,4.538375052218043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565824,,,train,hesrt,samples/GSE144239/GSM4565824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM4565825,GSE144239,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P6,P6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3650,33538,counts,pixel,4.538375052218043,platform_constant,True,H&E,4.538375052218043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565825,,,train,hesrt,samples/GSE144239/GSM4565825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM4565826,GSE144239,GSE144239,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,cSCC,,not stated,luna,not stated,,unknown,not stated,,GSE144239:P6,P6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3838,33538,counts,pixel,4.5305838676876204,platform_constant,True,H&E,4.5305838676876204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565826,,,train,hesrt,samples/GSE144239/GSM4565826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4459917,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,152,23371,counts,pixel,0.7177789283059562,platform_constant,True,H&E,0.7177789283059562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459917,,,train,hesrt,samples/GSE147747/GSM4459917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459918,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,197,23371,counts,pixel,0.7122831829594402,platform_constant,True,H&E,0.7122831829594402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459918,,,train,hesrt,samples/GSE147747/GSM4459918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459919,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,240,23371,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459919,,,train,hesrt,samples/GSE147747/GSM4459919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM4459920,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,218,23371,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459920,,,train,hesrt,samples/GSE147747/GSM4459920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM4459921,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,269,23371,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459921,,,train,hesrt,samples/GSE147747/GSM4459921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459922,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,274,23371,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459922,,,train,hesrt,samples/GSE147747/GSM4459922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459923,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,287,23371,counts,pixel,0.7413460601770779,platform_constant,True,H&E,0.7413460601770779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459923,,,train,hesrt,samples/GSE147747/GSM4459923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM4459924,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,326,23371,counts,pixel,0.7307746409185883,platform_constant,True,H&E,0.7307746409185883,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459924,,,train,hesrt,samples/GSE147747/GSM4459924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459925,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,361,23371,counts,pixel,0.728387649486892,platform_constant,True,H&E,0.728387649486892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459925,,,train,hesrt,samples/GSE147747/GSM4459925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459926,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,357,23371,counts,pixel,0.7254604943244073,platform_constant,True,H&E,0.7254604943244073,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459926,,,train,hesrt,samples/GSE147747/GSM4459926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459927,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,393,23371,counts,pixel,0.7365302821694607,platform_constant,True,H&E,0.7365302821694607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459927,,,train,hesrt,samples/GSE147747/GSM4459927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459928,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,403,23371,counts,pixel,0.7274824952933211,platform_constant,True,H&E,0.7274824952933211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459928,,,train,hesrt,samples/GSE147747/GSM4459928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM4459929,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,488,23371,counts,pixel,0.7166282264688141,platform_constant,True,H&E,0.7166282264688141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459929,,,train,hesrt,samples/GSE147747/GSM4459929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459930,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,461,23371,counts,pixel,0.7151860116497669,platform_constant,True,H&E,0.7151860116497669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459930,,,train,hesrt,samples/GSE147747/GSM4459930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459931,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,381,23371,counts,pixel,0.7141239624994147,platform_constant,True,H&E,0.7141239624994147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459931,,,train,hesrt,samples/GSE147747/GSM4459931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459932,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,470,23371,counts,pixel,0.7083294642576037,platform_constant,True,H&E,0.7083294642576037,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459932,,,train,hesrt,samples/GSE147747/GSM4459932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459933,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,491,23371,counts,pixel,0.712753312747814,platform_constant,True,H&E,0.712753312747814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459933,,,train,hesrt,samples/GSE147747/GSM4459933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4459934,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,512,23371,counts,pixel,0.7086659226992144,platform_constant,True,H&E,0.7086659226992144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459934,,,train,hesrt,samples/GSE147747/GSM4459934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459935,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,487,23371,counts,pixel,0.7167187776628312,platform_constant,True,H&E,0.7167187776628312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459935,,,train,hesrt,samples/GSE147747/GSM4459935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM4459936,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,522,23371,counts,pixel,0.7074491253228741,platform_constant,True,H&E,0.7074491253228741,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459936,,,train,hesrt,samples/GSE147747/GSM4459936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459937,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,494,23371,counts,pixel,0.7148405310516956,platform_constant,True,H&E,0.7148405310516956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459937,,,train,hesrt,samples/GSE147747/GSM4459937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459938,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,506,23371,counts,pixel,0.7309314915767978,platform_constant,True,H&E,0.7309314915767978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459938,,,train,hesrt,samples/GSE147747/GSM4459938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459939,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,546,23371,counts,pixel,0.7200298972224366,platform_constant,True,H&E,0.7200298972224366,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459939,,,train,hesrt,samples/GSE147747/GSM4459939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459940,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,433,23371,counts,pixel,0.7359104255046374,platform_constant,True,H&E,0.7359104255046374,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459940,,,train,hesrt,samples/GSE147747/GSM4459940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459941,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,509,23371,counts,pixel,0.7244921009874591,platform_constant,True,H&E,0.7244921009874591,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459941,,,train,hesrt,samples/GSE147747/GSM4459941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459942,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,580,23371,counts,pixel,0.7304657090429815,platform_constant,True,H&E,0.7304657090429815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459942,,,train,hesrt,samples/GSE147747/GSM4459942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459943,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,589,23371,counts,pixel,0.7272397313972512,platform_constant,True,H&E,0.7272397313972512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459943,,,train,hesrt,samples/GSE147747/GSM4459943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459944,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,556,23371,counts,pixel,0.728929569188911,platform_constant,True,H&E,0.728929569188911,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459944,,,train,hesrt,samples/GSE147747/GSM4459944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459945,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,546,23371,counts,pixel,0.7234021020435523,platform_constant,True,H&E,0.7234021020435523,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459945,,,train,hesrt,samples/GSE147747/GSM4459945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459946,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,560,23371,counts,pixel,0.7239314281706696,platform_constant,True,H&E,0.7239314281706696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459946,,,train,hesrt,samples/GSE147747/GSM4459946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459947,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,519,23371,counts,pixel,0.7295451887874109,platform_constant,True,H&E,0.7295451887874109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459947,,,train,hesrt,samples/GSE147747/GSM4459947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459948,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,581,23371,counts,pixel,0.7174837987292205,platform_constant,True,H&E,0.7174837987292205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459948,,,train,hesrt,samples/GSE147747/GSM4459948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459949,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,603,23371,counts,pixel,0.7183725600582873,platform_constant,True,H&E,0.7183725600582873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459949,,,train,hesrt,samples/GSE147747/GSM4459949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459950,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,577,23371,counts,pixel,0.7153866401680602,platform_constant,True,H&E,0.7153866401680602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459950,,,train,hesrt,samples/GSE147747/GSM4459950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459951,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,571,23371,counts,pixel,0.7211143751262884,platform_constant,True,H&E,0.7211143751262884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459951,,,train,hesrt,samples/GSE147747/GSM4459951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459952,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,591,23371,counts,pixel,0.7173530054592623,platform_constant,True,H&E,0.7173530054592623,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459952,,,train,hesrt,samples/GSE147747/GSM4459952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459953,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,604,23371,counts,pixel,0.7163422245111931,platform_constant,True,H&E,0.7163422245111931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459953,,,train,hesrt,samples/GSE147747/GSM4459953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459954,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,556,23371,counts,pixel,0.716593622152593,platform_constant,True,H&E,0.716593622152593,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459954,,,train,hesrt,samples/GSE147747/GSM4459954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459955,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,536,23371,counts,pixel,0.7176874183605242,platform_constant,True,H&E,0.7176874183605242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459955,,,train,hesrt,samples/GSE147747/GSM4459955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459956,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,620,23371,counts,pixel,0.7232097763809395,platform_constant,True,H&E,0.7232097763809395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459956,,,train,hesrt,samples/GSE147747/GSM4459956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459957,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,576,23371,counts,pixel,0.7209430618858328,platform_constant,True,H&E,0.7209430618858328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459957,,,train,hesrt,samples/GSE147747/GSM4459957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM4459958,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,589,23371,counts,pixel,0.7252100493093233,platform_constant,True,H&E,0.7252100493093233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459958,,,train,hesrt,samples/GSE147747/GSM4459958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459959,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,604,23371,counts,pixel,0.7266855964182916,platform_constant,True,H&E,0.7266855964182916,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459959,,,train,hesrt,samples/GSE147747/GSM4459959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459960,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,574,23371,counts,pixel,0.7238347788233109,platform_constant,True,H&E,0.7238347788233109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459960,,,train,hesrt,samples/GSE147747/GSM4459960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459961,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,639,23371,counts,pixel,0.7211266256657287,platform_constant,True,H&E,0.7211266256657287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459961,,,train,hesrt,samples/GSE147747/GSM4459961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459962,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,617,23371,counts,pixel,0.7202309898305036,platform_constant,True,H&E,0.7202309898305036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459962,,,train,hesrt,samples/GSE147747/GSM4459962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459963,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,606,23371,counts,pixel,0.7246277512998457,platform_constant,True,H&E,0.7246277512998457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459963,,,train,hesrt,samples/GSE147747/GSM4459963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459964,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,508,23371,counts,pixel,0.7132518469096335,platform_constant,True,H&E,0.7132518469096335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459964,,,train,hesrt,samples/GSE147747/GSM4459964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459965,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,549,23371,counts,pixel,0.7164578289712764,platform_constant,True,H&E,0.7164578289712764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459965,,,train,hesrt,samples/GSE147747/GSM4459965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459966,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,534,23371,counts,pixel,0.7164862510699711,platform_constant,True,H&E,0.7164862510699711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459966,,,train,hesrt,samples/GSE147747/GSM4459966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM4459967,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,508,23371,counts,pixel,0.7450246502237837,platform_constant,True,H&E,0.7450246502237837,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459967,,,train,hesrt,samples/GSE147747/GSM4459967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459968,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,494,23371,counts,pixel,0.7357630911684067,platform_constant,True,H&E,0.7357630911684067,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459968,,,train,hesrt,samples/GSE147747/GSM4459968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459969,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,460,23371,counts,pixel,0.7452950271362069,platform_constant,True,H&E,0.7452950271362069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459969,,,train,hesrt,samples/GSE147747/GSM4459969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM4459970,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,469,23371,counts,pixel,0.7407957435996176,platform_constant,True,H&E,0.7407957435996176,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459970,,,train,hesrt,samples/GSE147747/GSM4459970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459971,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,462,23371,counts,pixel,0.7433651969715908,platform_constant,True,H&E,0.7433651969715908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459971,,,train,hesrt,samples/GSE147747/GSM4459971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459972,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A1,A1,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,450,23371,counts,pixel,0.7393782280924578,platform_constant,True,H&E,0.7393782280924578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459972,,,train,hesrt,samples/GSE147747/GSM4459972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459973,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,527,23371,counts,pixel,0.7215744810367211,platform_constant,True,H&E,0.7215744810367211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459973,,,train,hesrt,samples/GSE147747/GSM4459973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459974,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,548,23371,counts,pixel,0.7223915583463696,platform_constant,True,H&E,0.7223915583463696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459974,,,train,hesrt,samples/GSE147747/GSM4459974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459975,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,524,23371,counts,pixel,0.7166222034690247,platform_constant,True,H&E,0.7166222034690247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459975,,,train,hesrt,samples/GSE147747/GSM4459975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459976,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,484,23371,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459976,,,train,hesrt,samples/GSE147747/GSM4459976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459977,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,490,23371,counts,pixel,0.7445577407947976,platform_constant,True,H&E,0.7445577407947976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459977,,,train,hesrt,samples/GSE147747/GSM4459977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459978,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,478,23371,counts,pixel,0.7459477191606944,platform_constant,True,H&E,0.7459477191606944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459978,,,train,hesrt,samples/GSE147747/GSM4459978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459979,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,479,23371,counts,pixel,0.7452030197544703,platform_constant,True,H&E,0.7452030197544703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459979,,,train,hesrt,samples/GSE147747/GSM4459979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459980,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,428,23371,counts,pixel,0.7389892965286344,platform_constant,True,H&E,0.7389892965286344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459980,,,train,hesrt,samples/GSE147747/GSM4459980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459981,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A2,A2,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,419,23371,counts,pixel,0.7313145279328939,platform_constant,True,H&E,0.7313145279328939,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459981,,,train,hesrt,samples/GSE147747/GSM4459981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4459982,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,386,23371,counts,pixel,0.7376903728642603,platform_constant,True,H&E,0.7376903728642603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459982,,,train,hesrt,samples/GSE147747/GSM4459982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM4459983,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,406,23371,counts,pixel,0.735467166338759,platform_constant,True,H&E,0.735467166338759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459983,,,train,hesrt,samples/GSE147747/GSM4459983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459984,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,237,23371,counts,pixel,0.7388465155166551,platform_constant,True,H&E,0.7388465155166551,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459984,,,train,hesrt,samples/GSE147747/GSM4459984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM4459985,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,250,23371,counts,pixel,0.7377839476671044,platform_constant,True,H&E,0.7377839476671044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459985,,,train,hesrt,samples/GSE147747/GSM4459985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459986,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,279,23371,counts,pixel,0.7307531064548638,platform_constant,True,H&E,0.7307531064548638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459986,,,train,hesrt,samples/GSE147747/GSM4459986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM4459987,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,276,23371,counts,pixel,0.7266489955085792,platform_constant,True,H&E,0.7266489955085792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459987,,,train,hesrt,samples/GSE147747/GSM4459987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459988,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,245,23371,counts,pixel,0.7314719615917352,platform_constant,True,H&E,0.7314719615917352,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459988,,,train,hesrt,samples/GSE147747/GSM4459988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459989,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,240,23371,counts,pixel,0.729558806395335,platform_constant,True,H&E,0.729558806395335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459989,,,train,hesrt,samples/GSE147747/GSM4459989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459990,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,188,23371,counts,pixel,0.7303833780421948,platform_constant,True,H&E,0.7303833780421948,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459990,,,train,hesrt,samples/GSE147747/GSM4459990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459991,GSE147747,GSE147747,Molecular Atlas of the Adult Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,9 weeks,male,extracted field,male,GSE147747:A3,A3,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,214,23371,counts,pixel,0.7237648833052647,platform_constant,True,H&E,0.7237648833052647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459991,,,train,hesrt,samples/GSE147747/GSM4459991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5026144,GSE148612,GSE148612,Neuroinflammatory astrocyte subtypes in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,24h_Saline_i.p.,juvenile,luna,juvenile,30–35 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2511,32285,counts,pixel,4.174543086023732,platform_constant,True,H&E,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026144,,,test,hesrt,samples/GSE148612/GSM5026144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5026145,GSE148612,GSE148612,Neuroinflammatory astrocyte subtypes in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,24h_Saline_i.p.,juvenile,luna,juvenile,30–35 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3113,32285,counts,pixel,4.174543086023732,platform_constant,True,H&E,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026145,,,test,hesrt,samples/GSE148612/GSM5026145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5026146,GSE148612,GSE148612,Neuroinflammatory astrocyte subtypes in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,24h_Saline_i.p.,juvenile,luna,juvenile,30–35 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2728,32285,counts,pixel,4.173404329338715,platform_constant,True,H&E,4.173404329338715,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026146,,,test,hesrt,samples/GSE148612/GSM5026146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5026147,GSE148612,GSE148612,Neuroinflammatory astrocyte subtypes in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,perturbation,luna,,24h_LPS_i.p.,juvenile,luna,juvenile,30–35 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2419,32285,counts,pixel,4.173404329338708,platform_constant,True,H&E,4.173404329338708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026147,,,test,hesrt,samples/GSE148612/GSM5026147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5026148,GSE148612,GSE148612,Neuroinflammatory astrocyte subtypes in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,perturbation,luna,,24h_LPS_i.p.,juvenile,luna,juvenile,30–35 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2157,32285,counts,pixel,4.173404329338708,platform_constant,True,H&E,4.173404329338708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026148,,,test,hesrt,samples/GSE148612/GSM5026148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026149,GSE148612,GSE148612,Neuroinflammatory astrocyte subtypes in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,perturbation,luna,,24h_LPS_i.p.,juvenile,luna,juvenile,30–35 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2730,32285,counts,pixel,4.173404329338708,platform_constant,True,H&E,4.173404329338708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026149,,,test,hesrt,samples/GSE148612/GSM5026149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4644079,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3805,27999,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.8708851699241063,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644079,,,train,sda-all,samples/GSE153424/GSM4644079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644080,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4128,27999,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.9273645819217258,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644080,,,train,sda-all,samples/GSE153424/GSM4644080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644081,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4169,27999,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.9277393421166704,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644081,,,train,sda-all,samples/GSE153424/GSM4644081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4644082,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3922,27999,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.912362885307886,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644082,,,train,sda-all,samples/GSE153424/GSM4644082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644083,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3736,27999,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644083,,,train,sda-all,samples/GSE153424/GSM4644083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644084,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3563,27999,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644084,,,train,sda-all,samples/GSE153424/GSM4644084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644085,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3610,27999,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644085,,,train,sda-all,samples/GSE153424/GSM4644085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644086,GSE153424,GSE153424,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,barcoded,neonatal or infant,age rule: postnatal day,neonatal or infant,P14,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3734,27999,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644086,,,train,sda-all,samples/GSE153424/GSM4644086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4656179,GSE153859,GSE153859,The spatial landscape of gene expression isoforms in tissue sections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2500,31053,counts,pixel,4.716119783594065,platform_constant,True,H&E,4.716119783594065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36928528,10.1101/2020.08.24.252296,SS-GSM4656179,same_section_within_series,GSM4656182,train,hesrt,samples/GSE153859/GSM4656179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9, ""life_stage"": 0.99}",,
GSM4656180,GSE153859,GSE153859,The spatial landscape of gene expression isoforms in tissue sections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2560,31053,counts,pixel,4.716119783594065,platform_constant,True,H&E,4.716119783594065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36928528,10.1101/2020.08.24.252296,SS-GSM4656180,same_section_within_series,GSM4656183,train,hesrt,samples/GSE153859/GSM4656180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM4656181,GSE153859,GSE153859,The spatial landscape of gene expression isoforms in tissue sections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002264,olfactory bulb,olfactory bulb,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,918,31053,counts,pixel,4.360439716717719,platform_constant,True,H&E,4.360439716717719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36928528,10.1101/2020.08.24.252296,SS-GSM4656181,same_section_within_series,GSM4656184,train,hesrt,samples/GSE153859/GSM4656181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM4663999,GSE154107,GSE154107,The orchestrated cellular and molecular responses of the kidney to endotoxin define a precise sepsis timeline.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,sepsis,cecal ligation puncture,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,GSE154107:129SV,129SV,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1888,31053,counts,pixel,4.279166708281583,platform_constant,True,H&E,4.279166708281583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33448928,,CG-25f97205805e,cross_gse_redeposit,GSM5224981,train,hesrt,samples/GSE154107/GSM4663999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6736780,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1862,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736780,,,train,sda-all,samples/GSE155121/GSM6736780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.4, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6736781,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1877,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736781,,,train,sda-all,samples/GSE155121/GSM6736781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM6736782,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1709,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736782,,,train,sda-all,samples/GSE155121/GSM6736782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6736783,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1607,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736783,,,train,sda-all,samples/GSE155121/GSM6736783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.43, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6736784,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1989,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736784,,,train,sda-all,samples/GSE155121/GSM6736784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6736785,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1489,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736785,,,train,sda-all,samples/GSE155121/GSM6736785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6736786,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1890,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736786,,,train,sda-all,samples/GSE155121/GSM6736786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6736787,GSE155121,GSE155121,The Single-cell and spatial transcriptional landscape of human development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,embryo,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,PCW4,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1861,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37192616,,GSM6736787,,,train,sda-all,samples/GSE155121/GSM6736787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM4745615,GSE156862,GSE156862,Spatial transcriptome of FFPE sample by DBiT-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Mouse embryo E10.5,whole embryo/organism,,,normal,luna,,Untreated,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2306,15633,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM4745615,,,train,sda-all,samples/GSE156862/GSM4745615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4745616,GSE156862,GSE156862,Spatial transcriptome of FFPE sample by DBiT-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Mouse embryo E10.5,whole embryo/organism,,,normal,luna,,Untreated,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2130,15880,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM4745616,,,train,sda-all,samples/GSE156862/GSM4745616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4745617,GSE156862,GSE156862,Spatial transcriptome of FFPE sample by DBiT-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0000947,aorta,Mouse aorta,primary tissue,,,normal,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,533,11520,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM4745617,,,train,sda-all,samples/GSE156862/GSM4745617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4745618,GSE156862,GSE156862,Spatial transcriptome of FFPE sample by DBiT-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002081,cardiac atrium,Mouse atrium,primary tissue,,,normal,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2107,14783,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM4745618,,,train,sda-all,samples/GSE156862/GSM4745618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4745619,GSE156862,GSE156862,Spatial transcriptome of FFPE sample by DBiT-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Mouse ventricle,primary tissue,,,normal,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2039,14858,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM4745619,,,train,sda-all,samples/GSE156862/GSM4745619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4797916,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Adult colon,primary tissue,,,normal,luna,,,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2649,33538,counts,pixel,4.241860729725631,platform_constant,True,H&E,4.241860729725631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797916,,,train,hesrt,samples/GSE158328/GSM4797916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM4797917,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Adult colon,primary tissue,,,normal,luna,,,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2316,33538,counts,pixel,4.274319570684875,platform_constant,True,H&E,4.274319570684875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797917,,,train,hesrt,samples/GSE158328/GSM4797917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4797918,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Fetal Colon,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1080,33538,counts,pixel,4.274319570684875,platform_constant,True,H&E,4.274319570684875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797918,,,train,hesrt,samples/GSE158328/GSM4797918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4797919,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Fetal Colon,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,19 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1242,33538,counts,pixel,4.2936641899386,platform_constant,True,H&E,4.2936641899386,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797919,,,train,hesrt,samples/GSE158328/GSM4797919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4797920,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Fetal Small Intestine,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,346,33538,counts,pixel,4.527272566101819,platform_constant,True,H&E,4.527272566101819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797920,,,train,hesrt,samples/GSE158328/GSM4797920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4797921,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Fetal Small Intestine,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,344,33538,counts,pixel,4.431685125685778,platform_constant,True,H&E,4.431685125685778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797921,,,train,hesrt,samples/GSE158328/GSM4797921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4797922,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Fetal Small Intestine,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,709,33538,counts,pixel,4.182771437896024,platform_constant,True,H&E,4.182771437896024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797922,,,train,hesrt,samples/GSE158328/GSM4797922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM4797923,GSE158328,GSE158328,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Fetal Small Intestine,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,644,33538,counts,pixel,4.253086368094124,platform_constant,True,H&E,4.253086368094124,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797923,,,train,hesrt,samples/GSE158328/GSM4797923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM4800808,GSE158450,GSE158450,"Cell-type, single-cell, and spatial signatures of brain-region specific splicing in postnatal development",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,age rule: postnatal day,neonatal or infant,8 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3024,31053,counts,pixel,4.865693479313843,platform_constant,True,H&E,4.865693479313843,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33469025;35301264;35604081;36593406,,GSM4800808,,,train,hesrt,samples/GSE158450/GSM4800808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7770348,GSE158730,GSE158730,NFI transcription factors regulate zonal olfactory receptor expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0001997,olfactory epithelium,olfactory epithelium,primary tissue,,,perturbation,luna,,NfiAfl/fl; NfiBfl/fl; NfiXfl/fl; K5CreER*/+; Rosa-CAG-tdtomfl/fl (KO),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1387,32285,counts,pixel,0.7352146220938077,platform_constant,True,H&E,0.7352146220938077,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770348,,,train,hesrt,samples/GSE158730/GSM7770348,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7770349,GSE158730,GSE158730,NFI transcription factors regulate zonal olfactory receptor expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0001997,olfactory epithelium,olfactory epithelium,primary tissue,,,perturbation,luna,,NfiAfl/fl; NfiBfl/fl; NfiXfl/fl; K5CreER*/+; Rosa-CAG-tdtomfl/fl (KO),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1535,32285,counts,pixel,0.7406594656976235,platform_constant,True,H&E,0.7406594656976235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770349,,,train,hesrt,samples/GSE158730/GSM7770349,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7770350,GSE158730,GSE158730,NFI transcription factors regulate zonal olfactory receptor expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,airway,luna,UBERON:0001997,olfactory epithelium,olfactory epithelium,primary tissue,,,perturbation,luna,,K5CreER*/+; Rosa-CAG-tdtomfl/fl (WT),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1562,32285,counts,pixel,0.7405579095048963,platform_constant,True,H&E,0.7405579095048963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770350,,,train,hesrt,samples/GSE158730/GSM7770350,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7770351,GSE158730,GSE158730,NFI transcription factors regulate zonal olfactory receptor expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0001997,olfactory epithelium,olfactory epithelium,primary tissue,,,perturbation,luna,,K5CreER*/+; Rosa-CAG-tdtomfl/fl (WT),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1714,32285,counts,pixel,0.7405579095048963,platform_constant,True,H&E,0.7405579095048963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770351,,,train,hesrt,samples/GSE158730/GSM7770351,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM4838131,GSE159709,GSE159709,Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,Danio rerio,skin,luna,UBERON:0002097,skin of body,,tumour tissue,MONDO:0005105,melanoma,disease,luna,melanoma,BRAF-V600E,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2425,32268,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34725363,,GSM4838131,,,train,sda-all,samples/GSE159709/GSM4838131,sda-tissue-disease-2.4,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM4838132,GSE159709,GSE159709,Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,Danio rerio,skin,luna,UBERON:0002097,skin of body,,tumour tissue,MONDO:0005105,melanoma,disease,luna,melanoma,BRAF-V600E,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2179,32268,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34725363,,GSM4838132,,,train,sda-all,samples/GSE159709/GSM4838132,sda-tissue-disease-2.4,"{""organ"": 0.45, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM4838133,GSE159709,GSE159709,Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,Danio rerio,skin,luna,UBERON:0002097,skin of body,,tumour tissue,MONDO:0005105,melanoma,disease,luna,melanoma,BRAF-V600E,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2677,32268,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34725363,,GSM4838133,,,train,sda-all,samples/GSE159709/GSM4838133,sda-tissue-disease-2.4,"{""organ"": 0.67, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.32, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM4861202,GSE160137,GSE160137,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002100,trunk,trunk of Pax2GFP mouse embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E9.5 (21 somite stage),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,198,53574,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.257418911812625,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861202,,,train,sda-all,samples/GSE160137/GSM4861202,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.85, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM4861203,GSE160137,GSE160137,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0002100,trunk,trunk of Pax2GFP mouse embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E9.5 (21 somite stage),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,222,53574,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.223255518423734,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861203,,,train,sda-all,samples/GSE160137/GSM4861203,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.84, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM4861204,GSE160137,GSE160137,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002100,trunk,trunk of Pax2GFP mouse embryo,primary tissue,,,perturbation,luna,,,embryonic,age rule: embryonic day,embryonic,E9.5 (21 somite stage),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,192,53574,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.197644959050538,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861204,,,train,sda-all,samples/GSE160137/GSM4861204,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM4861205,GSE160137,GSE160137,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002100,trunk,trunk of Pax2GFP mouse embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E9.5 (21 somite stage),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,178,53574,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.203652737212028,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861205,,,train,sda-all,samples/GSE160137/GSM4861205,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM4904759,GSE161318,GSE161318,Spatial RNA sequencing of regenerating mouse hindlimb muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001385,tibialis anterior,tibialis anterior muscle,primary tissue,,,perturbation,luna,,Notexin injury (Day 2),adult,age rule: age with unit,adult,5 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,982,33217,counts,pixel,0.36055493700865504,platform_constant,True,H&E,0.5000127414192713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34773081,,GSM4904759,,,train,hesrt,samples/GSE161318/GSM4904759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4904760,GSE161318,GSE161318,Spatial RNA sequencing of regenerating mouse hindlimb muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001385,tibialis anterior,tibialis anterior muscle,primary tissue,,,perturbation,luna,,Notexin injury (Day 5),adult,age rule: age with unit,adult,5 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1011,33217,counts,pixel,0.359757798335236,platform_constant,True,H&E,0.5000000741866777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34773081,,GSM4904760,,,train,hesrt,samples/GSE161318/GSM4904760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4904761,GSE161318,GSE161318,Spatial RNA sequencing of regenerating mouse hindlimb muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001385,tibialis anterior,tibialis anterior muscle,primary tissue,,,perturbation,luna,,Notexin injury (Day 7),adult,age rule: age with unit,adult,5 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,995,33217,counts,pixel,0.36010499904808674,platform_constant,True,H&E,0.5000132436451113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34773081,,GSM4904761,,,train,hesrt,samples/GSE161318/GSM4904761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9301054,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,26564,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301054,,,test,sda-all,samples/GSE161369/GSM9301054,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9301055,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,74003,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000171971017151,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301055,,,test,sda-all,samples/GSE161369/GSM9301055,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9301056,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,60870,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000111344404148,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301056,,,test,sda-all,samples/GSE161369/GSM9301056,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9301057,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,37661,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000126169939438,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301057,,,test,sda-all,samples/GSE161369/GSM9301057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9301058,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,67726,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301058,,,test,sda-all,samples/GSE161369/GSM9301058,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9301059,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,91962,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999889514970721,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301059,,,test,sda-all,samples/GSE161369/GSM9301059,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9301060,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,17474,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997417888865936,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301060,,,test,sda-all,samples/GSE161369/GSM9301060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9301061,GSE161369,GSE161369,Pancreatic Cancer Datasets,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66433,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999934200631673,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301061,,,test,sda-all,samples/GSE161369/GSM9301061,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4983123,GSE163631,GSE163631,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,Myocardial infarction,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,693,15300,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34489413,,GSM4983123,,,train,sda-all,samples/GSE163631/GSM4983123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5268644,GSE163631,GSE163631,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,,,perturbation,luna,,Sham control,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,544,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34489413,,GSM5268644,,,train,sda-all,samples/GSE163631/GSM5268644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5268645,GSE163631,GSE163631,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,,,normal,luna,,Sham control,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,960,14655,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34489413,,GSM5268645,,,train,sda-all,samples/GSE163631/GSM5268645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM5268646,GSE163631,GSE163631,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,Myocardial infarction,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,376,14466,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34489413,,GSM5268646,,,train,sda-all,samples/GSE163631/GSM5268646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5268647,GSE163631,GSE163631,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,Myocardial infarction,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,791,14519,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34489413,,GSM5268647,,,train,sda-all,samples/GSE163631/GSM5268647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5026931,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,675,18482,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026931,,,train,sda-all,samples/GSE165141/GSM5026931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026932,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,684,17530,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026932,,,train,sda-all,samples/GSE165141/GSM5026932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5026933,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,650,18719,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026933,,,train,sda-all,samples/GSE165141/GSM5026933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026934,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1288,19468,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026934,,,train,sda-all,samples/GSE165141/GSM5026934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM5026935,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,487,19871,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026935,,,train,sda-all,samples/GSE165141/GSM5026935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5026936,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1389,17765,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026936,,,train,sda-all,samples/GSE165141/GSM5026936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5026937,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,487,19882,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026937,,,train,sda-all,samples/GSE165141/GSM5026937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM5026938,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,648,16366,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026938,,,train,sda-all,samples/GSE165141/GSM5026938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026939,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,626,17499,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026939,,,train,sda-all,samples/GSE165141/GSM5026939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5026940,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,663,17808,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026940,,,train,sda-all,samples/GSE165141/GSM5026940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026941,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,629,17504,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026941,,,train,sda-all,samples/GSE165141/GSM5026941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5026942,GSE165141,GSE165141,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001113,lobe of liver,liver tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,590,18241,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,34857782,,GSM5026942,,,train,sda-all,samples/GSE165141/GSM5026942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5089667,GSE166948+GSE166950,GSE166948,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,WT unwounded,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,505,32285,counts,pixel,4.2220118081699685,platform_constant,True,H&E,4.2220118081699685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089667,,,val,hesrt,samples/GSE166948/GSM5089667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5089668,GSE166948+GSE166950,GSE166948,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,WT wounded day 3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,478,31053,counts,pixel,4.247916566840627,platform_constant,True,H&E,4.247916566840627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089668,,,val,hesrt,samples/GSE166948/GSM5089668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.66, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5089669,GSE166948+GSE166950,GSE166948,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,WT wounded day 3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,620,32285,counts,pixel,4.222011808169958,platform_constant,True,H&E,4.222011808169958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089669,,,val,hesrt,samples/GSE166948/GSM5089669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.51, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM5089670,GSE166948+GSE166950,GSE166948,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,GFP-KI wounded day 3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,792,31053,counts,pixel,4.237499866942504,platform_constant,True,H&E,4.237499866942504,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089670,,,val,hesrt,samples/GSE166948/GSM5089670,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM5089671,GSE166948+GSE166950,GSE166948,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,GFP-KI wounded day 3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,881,32285,counts,pixel,4.222011808169966,platform_constant,True,H&E,4.222011808169966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089671,,,val,hesrt,samples/GSE166948/GSM5089671,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5089672,GSE166948+GSE166950,GSE166948,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,GFP-KI wounded day 3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,633,32285,counts,pixel,4.222011808169958,platform_constant,True,H&E,4.222011808169958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089672,,,val,hesrt,samples/GSE166948/GSM5089672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM5173925,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,30827,21354,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173925,,,train,sda-all,samples/GSE169012/GSM5173925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173926,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,35355,21645,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173926,,,train,sda-all,samples/GSE169012/GSM5173926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173927,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,40365,22068,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173927,,,train,sda-all,samples/GSE169012/GSM5173927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173928,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,43840,22019,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173928,,,train,sda-all,samples/GSE169012/GSM5173928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173929,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,55086,22170,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173929,,,train,sda-all,samples/GSE169012/GSM5173929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173930,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,52364,21997,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173930,,,train,sda-all,samples/GSE169012/GSM5173930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173931,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49682,21651,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173931,,,train,sda-all,samples/GSE169012/GSM5173931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173932,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,47024,21646,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173932,,,train,sda-all,samples/GSE169012/GSM5173932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5173933,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,56016,21957,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173933,,,train,sda-all,samples/GSE169012/GSM5173933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173934,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,47249,22167,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173934,,,train,sda-all,samples/GSE169012/GSM5173934,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173935,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,53359,22428,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173935,,,train,sda-all,samples/GSE169012/GSM5173935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173936,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49049,22003,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173936,,,train,sda-all,samples/GSE169012/GSM5173936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173937,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,47076,22771,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173937,,,train,sda-all,samples/GSE169012/GSM5173937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173938,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,45479,22199,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173938,,,train,sda-all,samples/GSE169012/GSM5173938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173939,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,46893,21826,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173939,,,train,sda-all,samples/GSE169012/GSM5173939,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173940,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49717,21815,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173940,,,train,sda-all,samples/GSE169012/GSM5173940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173941,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,43088,21809,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173941,,,train,sda-all,samples/GSE169012/GSM5173941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5173942,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,50225,21641,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173942,,,train,sda-all,samples/GSE169012/GSM5173942,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5173943,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,52795,21602,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173943,,,train,sda-all,samples/GSE169012/GSM5173943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173944,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,51450,21434,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173944,,,train,sda-all,samples/GSE169012/GSM5173944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173945,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,30041,20479,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173945,,,train,sda-all,samples/GSE169012/GSM5173945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173946,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,34997,20701,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173946,,,train,sda-all,samples/GSE169012/GSM5173946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5173947,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,41337,21506,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173947,,,train,sda-all,samples/GSE169012/GSM5173947,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173948,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,46648,21487,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173948,,,train,sda-all,samples/GSE169012/GSM5173948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173949,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,42455,21533,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173949,,,train,sda-all,samples/GSE169012/GSM5173949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173950,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,50483,21787,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173950,,,train,sda-all,samples/GSE169012/GSM5173950,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173951,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49562,21767,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173951,,,train,sda-all,samples/GSE169012/GSM5173951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5173952,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,45535,21398,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173952,,,train,sda-all,samples/GSE169012/GSM5173952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173953,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,39903,21738,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173953,,,train,sda-all,samples/GSE169012/GSM5173953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173954,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,37956,21660,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173954,,,train,sda-all,samples/GSE169012/GSM5173954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173955,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,41202,21653,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173955,,,train,sda-all,samples/GSE169012/GSM5173955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173956,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,44306,21673,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173956,,,train,sda-all,samples/GSE169012/GSM5173956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173957,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,38022,21766,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173957,,,train,sda-all,samples/GSE169012/GSM5173957,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173958,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49988,21931,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173958,,,train,sda-all,samples/GSE169012/GSM5173958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173959,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49694,22051,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173959,,,train,sda-all,samples/GSE169012/GSM5173959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173960,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,51734,22004,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173960,,,train,sda-all,samples/GSE169012/GSM5173960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5173961,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,50418,21902,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173961,,,train,sda-all,samples/GSE169012/GSM5173961,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173962,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,49625,22038,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173962,,,train,sda-all,samples/GSE169012/GSM5173962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173963,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,52260,22165,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173963,,,train,sda-all,samples/GSE169012/GSM5173963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173964,GSE169012,GSE169012,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0009951,main olfactory bulb,Main olfactory bulb,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,male,extracted field,male,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,35047,19207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173964,,,train,sda-all,samples/GSE169012/GSM5173964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5213483,GSE169749,GSE169749,10X Visium Spatial transcriptomics of murine colon in steady state and during recovery after DSS colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2604,31053,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5213483,,,train,hesrt,samples/GSE169749/GSM5213483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5213484,GSE169749,GSE169749,10X Visium Spatial transcriptomics of murine colon in steady state and during recovery after DSS colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3630,31053,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5213484,,,train,hesrt,samples/GSE169749/GSM5213484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5224027,GSE171351,GSE171351,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,768,33538,counts,pixel,0.4878048780487805,platform_constant,True,H&E,0.5000078590627138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224027,,,val,hesrt,samples/GSE171351/GSM5224027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5224028,GSE171351,GSE171351,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1017,33538,counts,pixel,0.4878048780487805,platform_constant,True,H&E,0.5000078590627138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224028,,,val,hesrt,samples/GSE171351/GSM5224028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224029,GSE171351,GSE171351,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1469,33538,counts,pixel,0.4878048780487805,platform_constant,True,H&E,0.5000078590627138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224029,,,val,hesrt,samples/GSE171351/GSM5224029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224030,GSE171351,GSE171351,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,832,33538,counts,pixel,0.4878048780487805,platform_constant,True,H&E,0.5000065522116626,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224030,,,val,hesrt,samples/GSE171351/GSM5224030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224978,GSE171406,GSE171406,Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,Reference,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3007,33538,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34003797,,CG-96e459c3bbd8,cross_gse_redeposit,GSM6047774,train,hesrt,samples/GSE171406/GSM5224978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224979,GSE171406,GSE171406,Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,Reference,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1835,31053,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34003797,,GSM5224979,,,train,hesrt,samples/GSE171406/GSM5224979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5224980,GSE171406,GSE171406,Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005203,ischemia reperfusion injury,disease,luna,Ischemia Reperfuion Injury,Ischemia Reperfuion Injury,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2064,31053,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34003797,,GSM5224980,,,train,hesrt,samples/GSE171406/GSM5224980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5255579,GSE172416,GSE172416,Cell type inference in human lung tissue by domain adaptation of single-cell and spatial transcriptomic data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE172416:No.1,No.1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1591,36601,counts,pixel,3.937069137291552,platform_constant,True,H&E,3.937069137291552,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35191503,,GSM5255579,,,val,hesrt,samples/GSE172416/GSM5255579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5255580,GSE172416,GSE172416,Cell type inference in human lung tissue by domain adaptation of single-cell and spatial transcriptomic data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE172416:No.1,No.1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2683,36601,counts,pixel,4.0054589902768925,platform_constant,True,H&E,4.0054589902768925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35191503,,GSM5255580,,,val,hesrt,samples/GSE172416/GSM5255580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5273010,GSE173651,GSE173651,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2260,33538,counts,pixel,4.19310355561932,platform_constant,True,H&E,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273010,,,train,hesrt,samples/GSE173651/GSM5273010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5273011,GSE173651,GSE173651,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2692,33538,counts,pixel,4.19310355561932,platform_constant,True,H&E,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273011,,,train,hesrt,samples/GSE173651/GSM5273011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.45, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM5273012,GSE173651,GSE173651,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1869,33538,counts,pixel,4.19310355561932,platform_constant,True,H&E,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273012,,,train,hesrt,samples/GSE173651/GSM5273012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.37, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM5273013,GSE173651,GSE173651,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3354,33538,counts,pixel,4.19310355561932,platform_constant,True,H&E,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273013,,,train,hesrt,samples/GSE173651/GSM5273013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.51, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM5273014,GSE173651,GSE173651,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2333,33538,counts,pixel,4.148850610143831,platform_constant,True,H&E,4.148850610143831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273014,,,train,hesrt,samples/GSE173651/GSM5273014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.37, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM5273015,GSE173651,GSE173651,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2516,33538,counts,pixel,4.148850610143841,platform_constant,True,H&E,4.148850610143841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273015,,,train,hesrt,samples/GSE173651/GSM5273015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.36, ""life_stage"": 0.84}",uberon,low_confidence_annotation
GSM6443458,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,CK-p25,not stated,luna,not stated,,unknown,not stated,,GSE174265:7746,7746,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2616,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443458,,,train,sda-all,samples/GSE174265/GSM6443458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.71, ""life_stage"": 0.87}",,
GSM6443459,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,CK-p25,not stated,luna,not stated,,unknown,not stated,,GSE174265:7747,7747,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2303,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443459,,,train,sda-all,samples/GSE174265/GSM6443459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.6900000000000001, ""life_stage"": 0.97}",,
GSM6443460,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,CK-p25,not stated,luna,not stated,,unknown,not stated,,GSE174265:8253,8253,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2438,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443460,,,train,sda-all,samples/GSE174265/GSM6443460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.6000000000000001, ""life_stage"": 0.91}",,
GSM6443461,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,CK-p25,not stated,luna,not stated,,unknown,not stated,,GSE174265:8255,8255,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2490,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443461,,,train,sda-all,samples/GSE174265/GSM6443461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.45, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM6443462,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,CK,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,GSE174265:7748,7748,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2624,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443462,,,train,sda-all,samples/GSE174265/GSM6443462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.73, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM6443463,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,CK,not stated,luna,not stated,,unknown,not stated,,GSE174265:7749,7749,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2550,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443463,,,train,sda-all,samples/GSE174265/GSM6443463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.8300000000000001, ""life_stage"": 0.41000000000000003}",disease_status;life_stage,low_confidence_annotation
GSM6443464,GSE174265,GSE174265,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,CK,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,GSE174265:8254,8254,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2559,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36170369,,GSM6443464,,,train,sda-all,samples/GSE174265/GSM6443464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.09, ""uberon"": 0.75, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM5291683,GSE174313,GSE174313,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0002492,sagittal suture,Sagittal suture,primary tissue,,,perturbation,luna,,TrkAF592A mutant and control,neonatal or infant,age rule: postnatal day,neonatal or infant,0 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,423,31053,counts,pixel,4.081395419037193,platform_constant,True,H&E,4.081395419037193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291683,,,train,hesrt,samples/GSE174313/GSM5291683,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291684,GSE174313,GSE174313,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0002492,sagittal suture,Sagittal suture,primary tissue,,,perturbation,luna,,TrkAF592A mutant and control,neonatal or infant,age rule: postnatal day,neonatal or infant,0 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,363,31053,counts,pixel,3.988372223044195,platform_constant,True,H&E,3.988372223044195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291684,,,train,hesrt,samples/GSE174313/GSM5291684,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291685,GSE174313,GSE174313,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0002492,sagittal suture,Sagittal suture,primary tissue,,,perturbation,luna,,TrkAF592A mutant and control,neonatal or infant,age rule: postnatal day,neonatal or infant,0 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,560,31053,counts,pixel,4.0494186877654785,platform_constant,True,H&E,4.0494186877654785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291685,,,train,hesrt,samples/GSE174313/GSM5291685,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291686,GSE174313,GSE174313,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0002492,sagittal suture,Sagittal suture,primary tissue,,,perturbation,luna,,TrkAF592A mutant and control,neonatal or infant,age rule: postnatal day,neonatal or infant,0 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,324,31053,counts,pixel,3.9819766435216786,platform_constant,True,H&E,3.9819766435216786,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291686,,,train,hesrt,samples/GSE174313/GSM5291686,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291792,GSE174321,GSE174321,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,GSE174321:Littermate,Littermate,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2420,32285,counts,pixel,15.358585748004048,platform_constant,True,H&E,15.358585748004048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291792,,,train,hesrt,samples/GSE174321/GSM5291792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291793,GSE174321,GSE174321,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,transgenic,adult,age rule: age with unit,adult,3 months,male,extracted field,male,GSE174321:5XFAD (Tg6799),5XFAD (Tg6799),,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2987,32285,counts,pixel,15.358585748004048,platform_constant,True,H&E,15.358585748004048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291793,,,train,hesrt,samples/GSE174321/GSM5291793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5291794,GSE174321,GSE174321,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,adult,age rule: age with unit,adult,7 months,male,extracted field,male,GSE174321:Littermate,Littermate,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3482,32285,counts,pixel,17.065656336123478,platform_constant,True,H&E,17.065656336123478,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291794,,,train,hesrt,samples/GSE174321/GSM5291794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5291795,GSE174321,GSE174321,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,transgenic,adult,age rule: age with unit,adult,7 months,male,extracted field,male,GSE174321:5XFAD (Tg6799),5XFAD (Tg6799),,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3358,32285,counts,pixel,18.7727273196591,platform_constant,True,H&E,18.7727273196591,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291795,,,train,hesrt,samples/GSE174321/GSM5291795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5321365,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C45,OX_C45,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,336,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321365,,,test,hesrt,samples/GSE174647/GSM5321365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321366,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C45,OX_C45,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,575,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321366,,,test,hesrt,samples/GSE174647/GSM5321366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.67, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321367,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C45,OX_C45,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,703,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321367,,,test,hesrt,samples/GSE174647/GSM5321367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321368,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C45,OX_C45,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,435,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321368,,,test,hesrt,samples/GSE174647/GSM5321368,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.76, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321369,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C45,OX_C45,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,6,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321369,,,test,hesrt,samples/GSE174647/GSM5321369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.67, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321371,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,94,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321371,,,test,hesrt,samples/GSE174647/GSM5321371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321372,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,872,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321372,,,test,hesrt,samples/GSE174647/GSM5321372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321373,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,964,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321373,,,test,hesrt,samples/GSE174647/GSM5321373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321374,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,677,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321374,,,test,hesrt,samples/GSE174647/GSM5321374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321375,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,355,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321375,,,test,hesrt,samples/GSE174647/GSM5321375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321378,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,695,19456,counts,pixel,5.872202195147034,platform_constant,True,H&E,5.872202195147034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321378,,,test,hesrt,samples/GSE174647/GSM5321378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321380,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,721,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321380,,,test,hesrt,samples/GSE174647/GSM5321380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321381,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,327,19456,counts,pixel,5.859587353090476,platform_constant,True,H&E,5.859587353090476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321381,,,test,hesrt,samples/GSE174647/GSM5321381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321382,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,217,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321382,,,test,hesrt,samples/GSE174647/GSM5321382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321383,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,473,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321383,,,test,hesrt,samples/GSE174647/GSM5321383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321384,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,215,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321384,,,test,hesrt,samples/GSE174647/GSM5321384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321386,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,313,19456,counts,pixel,6.049506040189034,platform_constant,True,H&E,6.049506040189034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321386,,,test,hesrt,samples/GSE174647/GSM5321386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321387,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,278,19456,counts,pixel,5.882352941176471,platform_constant,True,H&E,5.882352941176471,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321387,,,test,hesrt,samples/GSE174647/GSM5321387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321388,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,404,19456,counts,pixel,5.879810320378547,platform_constant,True,H&E,5.879810320378547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321388,,,test,hesrt,samples/GSE174647/GSM5321388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321389,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,423,19456,counts,pixel,5.872202195147034,platform_constant,True,H&E,5.872202195147034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321389,,,test,hesrt,samples/GSE174647/GSM5321389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321390,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,90,19456,counts,pixel,5.879810320378547,platform_constant,True,H&E,5.879810320378547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321390,,,test,hesrt,samples/GSE174647/GSM5321390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321391,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,21,19456,counts,pixel,5.555555555555555,platform_constant,True,H&E,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321391,,,test,hesrt,samples/GSE174647/GSM5321391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321392,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,2,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321392,,,test,hesrt,samples/GSE174647/GSM5321392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321393,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,542,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321393,,,test,hesrt,samples/GSE174647/GSM5321393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321394,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,931,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321394,,,test,hesrt,samples/GSE174647/GSM5321394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321396,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,49,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321396,,,test,hesrt,samples/GSE174647/GSM5321396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321397,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,750,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321397,,,test,hesrt,samples/GSE174647/GSM5321397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321398,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,122,19456,counts,pixel,5.704979053851295,platform_constant,True,H&E,5.704979053851295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321398,,,test,hesrt,samples/GSE174647/GSM5321398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321399,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,300,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321399,,,test,hesrt,samples/GSE174647/GSM5321399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5321400,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,696,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321400,,,test,hesrt,samples/GSE174647/GSM5321400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321401,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,178,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321401,,,test,hesrt,samples/GSE174647/GSM5321401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321402,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,443,19456,counts,pixel,5.859587353090476,platform_constant,True,H&E,5.859587353090476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321402,,,test,hesrt,samples/GSE174647/GSM5321402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321403,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,682,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321403,,,test,hesrt,samples/GSE174647/GSM5321403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321404,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,222,19456,counts,pixel,5.555555555555555,platform_constant,True,H&E,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321404,,,test,hesrt,samples/GSE174647/GSM5321404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM5321405,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,575,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321405,,,test,hesrt,samples/GSE174647/GSM5321405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321406,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,422,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321406,,,test,hesrt,samples/GSE174647/GSM5321406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321407,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,36,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321407,,,test,hesrt,samples/GSE174647/GSM5321407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321408,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,513,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321408,,,test,hesrt,samples/GSE174647/GSM5321408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321409,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,435,19456,counts,pixel,5.555555555555555,platform_constant,True,H&E,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321409,,,test,hesrt,samples/GSE174647/GSM5321409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321410,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,214,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321410,,,test,hesrt,samples/GSE174647/GSM5321410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321411,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,79,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321411,,,test,hesrt,samples/GSE174647/GSM5321411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321413,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,48,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321413,,,test,hesrt,samples/GSE174647/GSM5321413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321414,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,73,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321414,,,test,hesrt,samples/GSE174647/GSM5321414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321415,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,777,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321415,,,test,hesrt,samples/GSE174647/GSM5321415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321416,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,704,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321416,,,test,hesrt,samples/GSE174647/GSM5321416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321417,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,806,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321417,,,test,hesrt,samples/GSE174647/GSM5321417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321418,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,530,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321418,,,test,hesrt,samples/GSE174647/GSM5321418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321419,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,401,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321419,,,test,hesrt,samples/GSE174647/GSM5321419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM5321420,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,204,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321420,,,test,hesrt,samples/GSE174647/GSM5321420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321421,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,234,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321421,,,test,hesrt,samples/GSE174647/GSM5321421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321422,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,677,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321422,,,test,hesrt,samples/GSE174647/GSM5321422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321423,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,805,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321423,,,test,hesrt,samples/GSE174647/GSM5321423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321424,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_585,OX_585,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,887,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321424,,,test,hesrt,samples/GSE174647/GSM5321424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 0.98}",,
GSM5321425,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,472,19456,counts,pixel,5.713120009277128,platform_constant,True,H&E,5.713120009277128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321425,,,test,hesrt,samples/GSE174647/GSM5321425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321426,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,348,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321426,,,test,hesrt,samples/GSE174647/GSM5321426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321427,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,801,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321427,,,test,hesrt,samples/GSE174647/GSM5321427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321428,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,737,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321428,,,test,hesrt,samples/GSE174647/GSM5321428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321429,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,628,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321429,,,test,hesrt,samples/GSE174647/GSM5321429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321430,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,828,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321430,,,test,hesrt,samples/GSE174647/GSM5321430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321431,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,167,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321431,,,test,hesrt,samples/GSE174647/GSM5321431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321435,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,239,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321435,,,test,hesrt,samples/GSE174647/GSM5321435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321436,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,395,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321436,,,test,hesrt,samples/GSE174647/GSM5321436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321437,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,553,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321437,,,test,hesrt,samples/GSE174647/GSM5321437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321438,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,89,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321438,,,test,hesrt,samples/GSE174647/GSM5321438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321439,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,810,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321439,,,test,hesrt,samples/GSE174647/GSM5321439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321440,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_407,OX_407,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,198,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321440,,,test,hesrt,samples/GSE174647/GSM5321440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321442,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,453,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321442,,,test,hesrt,samples/GSE174647/GSM5321442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321443,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,340,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321443,,,test,hesrt,samples/GSE174647/GSM5321443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321444,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,577,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321444,,,test,hesrt,samples/GSE174647/GSM5321444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321445,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,344,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321445,,,test,hesrt,samples/GSE174647/GSM5321445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321446,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,92,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321446,,,test,hesrt,samples/GSE174647/GSM5321446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321447,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_438,OX_438,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,275,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321447,,,test,hesrt,samples/GSE174647/GSM5321447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321448,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,100,19456,counts,pixel,5.713120009277128,platform_constant,True,H&E,5.713120009277128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321448,,,test,hesrt,samples/GSE174647/GSM5321448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321449,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,199,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321449,,,test,hesrt,samples/GSE174647/GSM5321449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321450,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,61,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321450,,,test,hesrt,samples/GSE174647/GSM5321450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321451,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,723,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321451,,,test,hesrt,samples/GSE174647/GSM5321451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321452,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,381,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321452,,,test,hesrt,samples/GSE174647/GSM5321452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321453,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_536,OX_536,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,950,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321453,,,test,hesrt,samples/GSE174647/GSM5321453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321454,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,35,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321454,,,test,hesrt,samples/GSE174647/GSM5321454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321455,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,866,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321455,,,test,hesrt,samples/GSE174647/GSM5321455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321456,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,2,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321456,,,test,hesrt,samples/GSE174647/GSM5321456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321457,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,577,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321457,,,test,hesrt,samples/GSE174647/GSM5321457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321459,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,74,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321459,,,test,hesrt,samples/GSE174647/GSM5321459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321460,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,744,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321460,,,test,hesrt,samples/GSE174647/GSM5321460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321461,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,740,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321461,,,test,hesrt,samples/GSE174647/GSM5321461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321462,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,717,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321462,,,test,hesrt,samples/GSE174647/GSM5321462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321463,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,160,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321463,,,test,hesrt,samples/GSE174647/GSM5321463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321464,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,869,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321464,,,test,hesrt,samples/GSE174647/GSM5321464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321465,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_586,OX_586,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,701,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321465,,,test,hesrt,samples/GSE174647/GSM5321465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321466,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,117,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321466,,,test,hesrt,samples/GSE174647/GSM5321466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321468,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,583,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321468,,,test,hesrt,samples/GSE174647/GSM5321468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321469,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,104,19456,counts,pixel,5.555555555555555,platform_constant,True,H&E,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321469,,,test,hesrt,samples/GSE174647/GSM5321469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321470,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,417,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321470,,,test,hesrt,samples/GSE174647/GSM5321470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321472,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,450,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321472,,,test,hesrt,samples/GSE174647/GSM5321472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321473,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,404,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321473,,,test,hesrt,samples/GSE174647/GSM5321473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321475,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,293,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321475,,,test,hesrt,samples/GSE174647/GSM5321475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321477,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,161,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321477,,,test,hesrt,samples/GSE174647/GSM5321477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321480,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,511,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321480,,,test,hesrt,samples/GSE174647/GSM5321480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321481,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,45,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321481,,,test,hesrt,samples/GSE174647/GSM5321481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321482,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,407,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321482,,,test,hesrt,samples/GSE174647/GSM5321482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321483,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_584,OX_584,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,482,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321483,,,test,hesrt,samples/GSE174647/GSM5321483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321484,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,854,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321484,,,test,hesrt,samples/GSE174647/GSM5321484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321485,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,407,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321485,,,test,hesrt,samples/GSE174647/GSM5321485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321486,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,322,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321486,,,test,hesrt,samples/GSE174647/GSM5321486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321487,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,770,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321487,,,test,hesrt,samples/GSE174647/GSM5321487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321488,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,941,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321488,,,test,hesrt,samples/GSE174647/GSM5321488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321489,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,911,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321489,,,test,hesrt,samples/GSE174647/GSM5321489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321490,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,908,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321490,,,test,hesrt,samples/GSE174647/GSM5321490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321491,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,955,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321491,,,test,hesrt,samples/GSE174647/GSM5321491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321492,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,991,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321492,,,test,hesrt,samples/GSE174647/GSM5321492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321493,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,677,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321493,,,test,hesrt,samples/GSE174647/GSM5321493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321494,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,470,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321494,,,test,hesrt,samples/GSE174647/GSM5321494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321495,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_510,OX_510,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,409,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321495,,,test,hesrt,samples/GSE174647/GSM5321495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321496,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,242,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321496,,,test,hesrt,samples/GSE174647/GSM5321496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321497,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,162,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321497,,,test,hesrt,samples/GSE174647/GSM5321497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321498,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,856,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321498,,,test,hesrt,samples/GSE174647/GSM5321498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321499,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,731,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321499,,,test,hesrt,samples/GSE174647/GSM5321499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321500,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,690,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321500,,,test,hesrt,samples/GSE174647/GSM5321500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321501,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,403,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321501,,,test,hesrt,samples/GSE174647/GSM5321501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321502,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,388,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321502,,,test,hesrt,samples/GSE174647/GSM5321502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321504,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,2,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321504,,,test,hesrt,samples/GSE174647/GSM5321504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321506,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,340,19456,counts,pixel,5.704979053851295,platform_constant,True,H&E,5.704979053851295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321506,,,test,hesrt,samples/GSE174647/GSM5321506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321507,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_523,OX_523,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,98,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321507,,,test,hesrt,samples/GSE174647/GSM5321507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321508,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,470,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321508,,,test,hesrt,samples/GSE174647/GSM5321508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321509,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,487,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321509,,,test,hesrt,samples/GSE174647/GSM5321509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321510,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,592,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321510,,,test,hesrt,samples/GSE174647/GSM5321510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321511,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,764,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321511,,,test,hesrt,samples/GSE174647/GSM5321511,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321512,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,884,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321512,,,test,hesrt,samples/GSE174647/GSM5321512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321513,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,715,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321513,,,test,hesrt,samples/GSE174647/GSM5321513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321515,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C36,OX_C36,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,225,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321515,,,test,hesrt,samples/GSE174647/GSM5321515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.65, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321516,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C36,OX_C36,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,351,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321516,,,test,hesrt,samples/GSE174647/GSM5321516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321517,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C36,OX_C36,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,613,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321517,,,test,hesrt,samples/GSE174647/GSM5321517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321518,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C36,OX_C36,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,813,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321518,,,test,hesrt,samples/GSE174647/GSM5321518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.75, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321519,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_C36,OX_C36,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,689,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321519,,,test,hesrt,samples/GSE174647/GSM5321519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.73, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321520,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,341,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321520,,,test,hesrt,samples/GSE174647/GSM5321520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321521,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,268,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321521,,,test,hesrt,samples/GSE174647/GSM5321521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321522,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,661,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321522,,,test,hesrt,samples/GSE174647/GSM5321522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321523,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,28,19456,counts,pixel,5.555555555555555,platform_constant,True,H&E,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321523,,,test,hesrt,samples/GSE174647/GSM5321523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321524,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,864,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321524,,,test,hesrt,samples/GSE174647/GSM5321524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321525,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_528,OX_528,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,66,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321525,,,test,hesrt,samples/GSE174647/GSM5321525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321526,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,230,19456,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,35726057,,GSM5321526,,,test,sda-all,samples/GSE174647/GSM5321526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321527,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,96,19456,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,35726057,,GSM5321527,,,test,sda-all,samples/GSE174647/GSM5321527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM5321528,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,611,19456,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,35726057,,GSM5321528,,,test,sda-all,samples/GSE174647/GSM5321528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321529,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,221,19456,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,35726057,,GSM5321529,,,test,sda-all,samples/GSE174647/GSM5321529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321530,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,217,19456,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,35726057,,GSM5321530,,,test,sda-all,samples/GSE174647/GSM5321530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321531,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,805,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321531,,,test,hesrt,samples/GSE174647/GSM5321531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321532,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,555,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321532,,,test,hesrt,samples/GSE174647/GSM5321532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321533,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,944,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321533,,,test,hesrt,samples/GSE174647/GSM5321533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321534,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,696,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321534,,,test,hesrt,samples/GSE174647/GSM5321534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321535,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,650,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321535,,,test,hesrt,samples/GSE174647/GSM5321535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321536,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_527,OX_527,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,868,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321536,,,test,hesrt,samples/GSE174647/GSM5321536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321537,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,499,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321537,,,test,hesrt,samples/GSE174647/GSM5321537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321538,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,3,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321538,,,test,hesrt,samples/GSE174647/GSM5321538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321539,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,483,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321539,,,test,hesrt,samples/GSE174647/GSM5321539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321540,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,108,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321540,,,test,hesrt,samples/GSE174647/GSM5321540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321541,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,441,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321541,,,test,hesrt,samples/GSE174647/GSM5321541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5321542,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,772,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321542,,,test,hesrt,samples/GSE174647/GSM5321542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321543,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,824,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321543,,,test,hesrt,samples/GSE174647/GSM5321543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321545,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,749,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321545,,,test,hesrt,samples/GSE174647/GSM5321545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321546,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,130,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321546,,,test,hesrt,samples/GSE174647/GSM5321546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321547,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,451,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321547,,,test,hesrt,samples/GSE174647/GSM5321547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321548,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,67,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321548,,,test,hesrt,samples/GSE174647/GSM5321548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321549,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,624,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321549,,,test,hesrt,samples/GSE174647/GSM5321549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321550,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,394,19456,counts,pixel,5.555555555555555,platform_constant,True,H&E,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321550,,,test,hesrt,samples/GSE174647/GSM5321550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321551,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,618,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321551,,,test,hesrt,samples/GSE174647/GSM5321551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5321552,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_535,OX_535,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,848,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321552,,,test,hesrt,samples/GSE174647/GSM5321552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321553,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,642,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321553,,,test,hesrt,samples/GSE174647/GSM5321553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321554,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,4,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321554,,,test,hesrt,samples/GSE174647/GSM5321554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321555,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,120,19456,counts,pixel,5.708464785735384,platform_constant,True,H&E,5.708464785735384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321555,,,test,hesrt,samples/GSE174647/GSM5321555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321556,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_530,OX_530,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,185,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321556,,,test,hesrt,samples/GSE174647/GSM5321556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321558,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,579,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321558,,,test,hesrt,samples/GSE174647/GSM5321558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321559,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,505,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321559,,,test,hesrt,samples/GSE174647/GSM5321559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321560,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,783,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321560,,,test,hesrt,samples/GSE174647/GSM5321560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321561,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,186,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321561,,,test,hesrt,samples/GSE174647/GSM5321561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321562,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,477,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321562,,,test,hesrt,samples/GSE174647/GSM5321562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321563,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,MS,MS,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_342,OX_342,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,397,19456,counts,pixel,5.7119547797753984,platform_constant,True,H&E,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321563,,,test,hesrt,samples/GSE174647/GSM5321563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321564,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,278,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321564,,,test,hesrt,samples/GSE174647/GSM5321564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.72, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321565,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,3,19456,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321565,,,test,hesrt,samples/GSE174647/GSM5321565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321566,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,608,19456,counts,pixel,5.714285714285714,platform_constant,True,H&E,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321566,,,test,hesrt,samples/GSE174647/GSM5321566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321567,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,787,19456,counts,pixel,5.819759619793254,platform_constant,True,H&E,5.819759619793254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321567,,,test,hesrt,samples/GSE174647/GSM5321567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321568,GSE174647,GSE174647,Identification of early neurodegenerative pathways in progressive multiple sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,brain cortex,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,,HI,not stated,luna,not stated,,unknown,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,712,19456,counts,pixel,5.879810320378547,platform_constant,True,H&E,5.879810320378547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321568,,,test,hesrt,samples/GSE174647/GSM5321568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5924030,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4510,17943,counts,pixel,3.8664384328165355,platform_constant,True,H&E,3.8664384328165355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924030,,,train,hesrt,samples/GSE175540/GSM5924030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924031,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4755,17943,counts,pixel,3.885779883096601,platform_constant,True,H&E,3.885779883096601,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-9baa1d1e0f25,cross_gse_redeposit,GSM8440295,train,hesrt,samples/GSE175540/GSM5924031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924032,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3829,17943,counts,pixel,3.8603879293001206,platform_constant,True,H&E,3.8603879293001206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-46629a0da079,cross_gse_redeposit,GSM8440296,train,hesrt,samples/GSE175540/GSM5924032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5924033,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4975,17943,counts,pixel,3.9480975731977987,platform_constant,True,H&E,3.9480975731977987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-67f978fc00ab,cross_gse_redeposit,GSM8440298,train,hesrt,samples/GSE175540/GSM5924033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5924034,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4860,17943,counts,pixel,3.8885319996379897,platform_constant,True,H&E,3.8885319996379897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924034,,,train,hesrt,samples/GSE175540/GSM5924034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924035,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4948,17943,counts,pixel,3.910185259322293,platform_constant,True,H&E,3.910185259322293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-0889fbc16d13,cross_gse_redeposit,GSM8440299,train,hesrt,samples/GSE175540/GSM5924035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924036,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4915,17943,counts,pixel,3.967592655578104,platform_constant,True,H&E,3.967592655578104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924036,,,train,hesrt,samples/GSE175540/GSM5924036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924037,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3585,17943,counts,pixel,3.9138889327244235,platform_constant,True,H&E,3.9138889327244235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-7ccd33d56775,cross_gse_redeposit,GSM8440307,train,hesrt,samples/GSE175540/GSM5924037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924038,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3206,17943,counts,pixel,3.868807246714235,platform_constant,True,H&E,3.868807246714235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-25aa9d1085b5,cross_gse_redeposit,GSM8440301,train,hesrt,samples/GSE175540/GSM5924038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924039,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4940,17943,counts,pixel,3.971296321633138,platform_constant,True,H&E,3.971296321633138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924039,,,train,hesrt,samples/GSE175540/GSM5924039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924040,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4562,17943,counts,pixel,3.903703717757041,platform_constant,True,H&E,3.903703717757041,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924040,,,train,hesrt,samples/GSE175540/GSM5924040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924041,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4359,17943,counts,pixel,3.9249999085474974,platform_constant,True,H&E,3.9249999085474974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-b432ff0847be,cross_gse_redeposit,GSM8440311,train,hesrt,samples/GSE175540/GSM5924041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924042,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1451,36601,counts,pixel,4.403623507225773,platform_constant,True,H&E,4.403623507225773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924042,,,train,hesrt,samples/GSE175540/GSM5924042,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924043,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1439,36601,counts,pixel,4.521100871135091,platform_constant,True,H&E,4.521100871135091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924043,,,train,hesrt,samples/GSE175540/GSM5924043,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5924044,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1983,36601,counts,pixel,4.844036681746746,platform_constant,True,H&E,4.844036681746746,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924044,,,train,hesrt,samples/GSE175540/GSM5924044,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924045,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1696,36601,counts,pixel,4.403669837504559,platform_constant,True,H&E,4.403669837504559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924045,,,train,hesrt,samples/GSE175540/GSM5924045,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924046,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1949,36601,counts,pixel,4.521100871135091,platform_constant,True,H&E,4.521100871135091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924046,,,train,hesrt,samples/GSE175540/GSM5924046,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924047,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2374,36601,counts,pixel,4.844036681746773,platform_constant,True,H&E,4.844036681746773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924047,,,train,hesrt,samples/GSE175540/GSM5924047,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924048,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1678,36601,counts,pixel,5.260274309260301,platform_constant,True,H&E,5.260274309260301,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924048,,,train,hesrt,samples/GSE175540/GSM5924048,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924049,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1186,36601,counts,pixel,4.844036681746773,platform_constant,True,H&E,4.844036681746773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924049,,,train,hesrt,samples/GSE175540/GSM5924049,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924050,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1349,36601,counts,pixel,4.462385218287565,platform_constant,True,H&E,4.462385218287565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-d0a7c6f62c01,cross_gse_redeposit,GSM8440294,train,hesrt,samples/GSE175540/GSM5924050,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924051,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2007,36601,counts,pixel,4.8440366817467995,platform_constant,True,H&E,4.8440366817467995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-8dba471f046c,cross_gse_redeposit,GSM8440297,train,hesrt,samples/GSE175540/GSM5924051,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924052,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2580,36601,counts,pixel,4.383561756054834,platform_constant,True,H&E,4.383561756054834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-1ff53edc6224,cross_gse_redeposit,GSM8440300,train,hesrt,samples/GSE175540/GSM5924052,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924053,GSE175540,GSE175540,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,ccRCC tumor,tumour tissue,MONDO:0005549,renal cell adenocarcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1084,36601,counts,pixel,4.558904128262326,platform_constant,True,H&E,4.558904128262326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-c2563cc48122,cross_gse_redeposit,GSM8440302,train,hesrt,samples/GSE175540/GSM5924053,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5355663,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1689,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5355663,,,test,sda-all,samples/GSE176092/GSM5355663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5355666,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3154,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5355666,,,test,sda-all,samples/GSE176092/GSM5355666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5355668,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1153,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5355668,,,test,sda-all,samples/GSE176092/GSM5355668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM5943189,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1577,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943189,,,test,sda-all,samples/GSE176092/GSM5943189,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943190,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1640,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943190,,,test,sda-all,samples/GSE176092/GSM5943190,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943191,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1457,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943191,,,test,sda-all,samples/GSE176092/GSM5943191,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943192,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,920,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943192,,,test,sda-all,samples/GSE176092/GSM5943192,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5943193,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1301,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943193,,,test,sda-all,samples/GSE176092/GSM5943193,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943194,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1806,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943194,,,test,sda-all,samples/GSE176092/GSM5943194,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5943195,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1425,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943195,,,test,sda-all,samples/GSE176092/GSM5943195,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5943196,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1569,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943196,,,test,sda-all,samples/GSE176092/GSM5943196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5943197,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1845,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943197,,,test,sda-all,samples/GSE176092/GSM5943197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5943198,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1035,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943198,,,test,sda-all,samples/GSE176092/GSM5943198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5943199,GSE176092,GSE176092,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1536,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM5943199,,,test,sda-all,samples/GSE176092/GSM5943199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5384657,GSE178221,GSE178221,SpotClean adjusts for spot swapping in spatial transcriptomics data,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,colon,uberon_chain,UBERON:0001155,colon,Mouse colon and human skin,primary tissue,,,normal,luna,,wild type,adult,luna,adult,10 week old mouse and 52 year old human,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1326,68886,counts,pixel,2.0408163265306123,platform_constant,True,H&E,2.0408163265306123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35624112,,GSM5384657,,,train,hesrt,samples/GSE178221/GSM5384657,sda-tissue-disease-2.4,"{""organ"": 0.58, ""sample_kind"": 0.49, ""disease_status"": 0.8, ""uberon"": 0.32, ""life_stage"": 0.9400000000000001}",organ;sample_kind;uberon,low_confidence_annotation
GSM5384658,GSE178221,GSE178221,SpotClean adjusts for spot swapping in spatial transcriptomics data,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,small intestine,luna,UBERON:0002114,duodenum,Mouse duodenum and human skin,primary tissue,,,normal,luna,,wild type,adult,luna,adult,10 week old mouse and 52 year old human,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2030,68886,counts,pixel,2.0104818294981226,platform_constant,True,H&E,2.0104818294981226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35624112,,GSM5384658,,,train,hesrt,samples/GSE178221/GSM5384658,sda-tissue-disease-2.4,"{""organ"": 0.67, ""sample_kind"": 0.93, ""disease_status"": 0.73, ""uberon"": 0.62, ""life_stage"": 0.9500000000000001}",,
GSM5384659,GSE178221,GSE178221,SpotClean adjusts for spot swapping in spatial transcriptomics data,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,heart,luna,UBERON:0000948,heart,Mouse heart and human skin,primary tissue,,,normal,luna,,wild type,adult,luna,adult,10 week old mouse and 52 year old human,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1900,68886,counts,pixel,2.0,platform_constant,True,H&E,2.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35624112,,GSM5384659,,,train,hesrt,samples/GSE178221/GSM5384659,sda-tissue-disease-2.4,"{""organ"": 0.36, ""sample_kind"": 0.79, ""disease_status"": 0.81, ""uberon"": 0.42, ""life_stage"": 0.93}",organ;uberon,low_confidence_annotation
GSM5388414,GSE178361+GSE178362,GSE178361,Human distal lung maps and lineage hierarchies reveal a bipotent progenitor [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0000117,respiratory tube,lung tissue,primary tissue,,,normal,luna,normal,Normal,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1175,36601,counts,pixel,4.815022963982177,platform_constant,True,H&E,4.815022963982177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35355018,,GSM5388414,,,train,hesrt,samples/GSE178361/GSM5388414,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM5388415,GSE178361+GSE178362,GSE178361,Human distal lung maps and lineage hierarchies reveal a bipotent progenitor [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tissue,primary tissue,,,normal,luna,normal,Normal,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1045,36601,counts,pixel,4.878033782080764,platform_constant,True,H&E,4.878033782080764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35355018,,GSM5388415,,,train,hesrt,samples/GSE178361/GSM5388415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395087,GSE178636,GSE178636,Spatiotemporal transcriptomes of mouse embryo,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,9.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,487,54838,counts,pixel,4.266576991589823,platform_constant,True,H&E,4.266576991589823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395087,,,train,hesrt,samples/GSE178636/GSM5395087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395088,GSE178636,GSE178636,Spatiotemporal transcriptomes of mouse embryo,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,10.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1052,54838,counts,pixel,4.929346624194788,platform_constant,True,H&E,4.929346624194788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395088,,,train,hesrt,samples/GSE178636/GSM5395088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395089,GSE178636,GSE178636,Spatiotemporal transcriptomes of mouse embryo,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,11.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1643,54838,counts,pixel,4.846576581869805,platform_constant,True,H&E,4.846576581869805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395089,,,train,hesrt,samples/GSE178636/GSM5395089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395090,GSE178636,GSE178636,Spatiotemporal transcriptomes of mouse embryo,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2782,54838,counts,pixel,4.63945752545739,platform_constant,True,H&E,4.63945752545739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395090,,,train,hesrt,samples/GSE178636/GSM5395090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6443210,GSE178758,GSE178758,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin wounds,primary tissue,,,normal,luna,,POD 0 (unwounded),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,949,32285,counts,pixel,4.80821821294417,platform_constant,True,H&E,4.80821821294417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443210,,,train,hesrt,samples/GSE178758/GSM6443210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6443211,GSE178758,GSE178758,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin wounds,primary tissue,,,perturbation,luna,,POD 2,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1088,32285,counts,pixel,4.372009928651815,platform_constant,True,H&E,4.372009928651815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443211,,,train,hesrt,samples/GSE178758/GSM6443211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.65, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6443212,GSE178758,GSE178758,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin wounds,primary tissue,,,perturbation,luna,,POD 7,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1671,32285,counts,pixel,4.800394060032115,platform_constant,True,H&E,4.800394060032115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443212,,,train,hesrt,samples/GSE178758/GSM6443212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6443213,GSE178758,GSE178758,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin wounds,primary tissue,,,perturbation,luna,,POD 14,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,720,32285,counts,pixel,4.366412084494655,platform_constant,True,H&E,4.366412084494655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443213,,,train,hesrt,samples/GSE178758/GSM6443213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5420749,GSE179572,GSE179572,Spatial transcriptomics of human brain metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0021211;MONDO:0005061,brain neoplasm;lung adenocarcinoma,disease,luna,lung adenocarcinoma,brain metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2112,36601,counts,pixel,4.633548098982753,platform_constant,True,H&E,4.633548098982753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420749,,,train,hesrt,samples/GSE179572/GSM5420749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5420750,GSE179572,GSE179572,Spatial transcriptomics of human brain metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0021211;MONDO:0005105,brain neoplasm;melanoma,disease,luna,melanoma,brain metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1716,36601,counts,pixel,5.095483981335921,platform_constant,True,H&E,5.095483981335921,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420750,,,train,hesrt,samples/GSE179572/GSM5420750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5420751,GSE179572,GSE179572,Spatial transcriptomics of human brain metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0021211;MONDO:0005061,brain neoplasm;lung adenocarcinoma,disease,luna,lung adenocarcinoma,brain metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,946,36601,counts,pixel,4.6374192487345685,platform_constant,True,H&E,4.6374192487345685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420751,,,train,hesrt,samples/GSE179572/GSM5420751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5420752,GSE179572,GSE179572,Spatial transcriptomics of human brain metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007763;MONDO:0021211,nonpapillary renal cell carcinoma;brain neoplasm,disease,luna,renal cell carcinoma (clear cell),brain metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1298,36601,counts,pixel,4.622903305320407,platform_constant,True,H&E,4.622903305320407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420752,,,train,hesrt,samples/GSE179572/GSM5420752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5420753,GSE179572,GSE179572,Spatial transcriptomics of human brain metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0021211;MONDO:0004989,brain neoplasm;breast carcinoma,disease,luna,breast carcinoma,brain metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4342,36601,counts,pixel,4.633225988977563,platform_constant,True,H&E,4.633225988977563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420753,,,train,hesrt,samples/GSE179572/GSM5420753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5420754,GSE179572,GSE179572,Spatial transcriptomics of human brain metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0021211;MONDO:0005061,brain neoplasm;lung adenocarcinoma,disease,luna,lung adenocarcinoma,brain metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2152,36601,counts,pixel,4.6354840313554915,platform_constant,True,H&E,4.6354840313554915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420754,,,train,hesrt,samples/GSE179572/GSM5420754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5467944,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,D10 Blastema [A1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1007,31053,counts,pixel,4.371802511732713,platform_constant,True,H&E,4.371802511732713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467944,,,train,hesrt,samples/GSE180682/GSM5467944,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM5467945,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,D10 Blastema [B1],not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1234,31053,counts,pixel,4.368022997270666,platform_constant,True,H&E,4.368022997270666,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467945,,,train,hesrt,samples/GSE180682/GSM5467945,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.49, ""life_stage"": 0.65}",organ;uberon,low_confidence_annotation
GSM5467946,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,D10 Blastema [C1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,993,31053,counts,pixel,4.3642444428604525,platform_constant,True,H&E,4.3642444428604525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467946,,,train,hesrt,samples/GSE180682/GSM5467946,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.51, ""life_stage"": 0.81}",organ;uberon,low_confidence_annotation
GSM5467947,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,D10 Blastema [D1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1304,31053,counts,pixel,4.369112169696847,platform_constant,True,H&E,4.369112169696847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467947,,,train,hesrt,samples/GSE180682/GSM5467947,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.46, ""life_stage"": 0.56}",uberon;life_stage,low_confidence_annotation
GSM5896868,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,OAA-treated Aged Digit D21 [A1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1538,32285,counts,pixel,4.370930215948597,platform_constant,True,H&E,4.370930215948597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896868,,,train,hesrt,samples/GSE180682/GSM5896868,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5896869,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,OAA-treated Aged Digit D21 [B1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1541,32285,counts,pixel,4.370856344609203,platform_constant,True,H&E,4.370856344609203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896869,,,train,hesrt,samples/GSE180682/GSM5896869,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5896870,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,OAA-treated Aged Digit D21 [C1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1314,32285,counts,pixel,4.350000103530009,platform_constant,True,H&E,4.350000103530009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896870,,,train,hesrt,samples/GSE180682/GSM5896870,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5896871,GSE180682,GSE180682,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0002544,digit,Digit,primary tissue,,,perturbation,luna,,OAA-treated Aged Digit D21 [D1],aged,luna,aged,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1137,32285,counts,pixel,4.352035224050076,platform_constant,True,H&E,4.352035224050076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896871,,,train,hesrt,samples/GSE180682/GSM5896871,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5494475,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),not stated,luna,not stated,,unknown,not stated,,GSE181300:1,1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1155,36601,counts,pixel,4.068939567845868,platform_constant,True,H&E,4.068939567845868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494475,,,val,hesrt,samples/GSE181300/GSM5494475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM5494476,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),not stated,luna,not stated,,unknown,not stated,,GSE181300:1,1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1726,36601,counts,pixel,4.053787810035633,platform_constant,True,H&E,4.053787810035633,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494476,,,val,hesrt,samples/GSE181300/GSM5494476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM5494477,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),not stated,luna,not stated,,unknown,not stated,,GSE181300:1,1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1191,36601,counts,pixel,4.065384481125283,platform_constant,True,H&E,4.065384481125283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494477,,,val,hesrt,samples/GSE181300/GSM5494477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM5494478,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),not stated,luna,not stated,,unknown,not stated,,GSE181300:1,1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1522,36601,counts,pixel,4.165384769503849,platform_constant,True,H&E,4.165384769503849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494478,,,val,hesrt,samples/GSE181300/GSM5494478,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5494479,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),not stated,luna,not stated,,unknown,not stated,,GSE181300:2,2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2197,36601,counts,pixel,4.604269681606429,platform_constant,True,H&E,4.604269681606429,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494479,,,val,hesrt,samples/GSE181300/GSM5494479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM5494480,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),not stated,luna,not stated,,unknown,not stated,,GSE181300:2,2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1853,36601,counts,pixel,4.585452503497427,platform_constant,True,H&E,4.585452503497427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494480,,,val,hesrt,samples/GSE181300/GSM5494480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM5494481,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),not stated,luna,not stated,,unknown,not stated,,GSE181300:2,2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1470,36601,counts,pixel,4.604269681606429,platform_constant,True,H&E,4.604269681606429,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494481,,,val,hesrt,samples/GSE181300/GSM5494481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM5494482,GSE181300,GSE181300,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,head and neck,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),not stated,luna,not stated,,unknown,not stated,,GSE181300:2,2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,924,36601,counts,pixel,5.018748994943713,platform_constant,True,H&E,5.018748994943713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494482,,,val,hesrt,samples/GSE181300/GSM5494482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5519054,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,normal,luna,,"control, no treatment (untouched brain)",adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2679,26124,counts,pixel,5.0105425688414735,platform_constant,True,H&E,5.0105425688414735,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519054,,,train,hesrt,samples/GSE182127/GSM5519054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5519055,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,perturbation,luna,,10 nmol heme-hemopexin in 10 µL (10 µL of 1000 µmol/L),adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2936,26124,counts,pixel,4.997870119050088,platform_constant,True,H&E,4.997870119050088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519055,,,train,hesrt,samples/GSE182127/GSM5519055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519056,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,perturbation,luna,,0.3 nmol heme-albumin in 10 µL (10 µL of 30 µmol/L),adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2597,26124,counts,pixel,4.5008782083688175,platform_constant,True,H&E,4.5008782083688175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519056,,,train,hesrt,samples/GSE182127/GSM5519056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519057,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,perturbation,luna,,1.25 nmol heme-albumin in 10 µL (10 µL of 125 µmol/L),adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2427,26124,counts,pixel,5.242272002504274,platform_constant,True,H&E,5.242272002504274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519057,,,train,hesrt,samples/GSE182127/GSM5519057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519058,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,perturbation,luna,,5.0 nmol heme-albumin in 10 µL (10 µL of 500 µmol/L),adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2694,26124,counts,pixel,5.041319344920713,platform_constant,True,H&E,5.041319344920713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519058,,,train,hesrt,samples/GSE182127/GSM5519058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519059,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,perturbation,luna,,10 nmol heme-albumin in 10 µL (10 µL of 1000 µmol/L),adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2953,26124,counts,pixel,4.997870119050088,platform_constant,True,H&E,4.997870119050088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519059,,,train,hesrt,samples/GSE182127/GSM5519059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5519060,GSE182127,GSE182127,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,normal,luna,,10 µL saline (sham),adult,age rule: age with unit,adult,10–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2780,26124,counts,pixel,4.496996584250453,platform_constant,True,H&E,4.496996584250453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519060,,,train,hesrt,samples/GSE182127/GSM5519060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5531131,GSE182208,GSE182208,Endothelial Phospholipase C gamma2 Improves Outcomes of Diabetic Ischemic Limb Rescue Following VEGF Therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,unwounded skin tissue,primary tissue,,,normal,luna,,,aged,age rule: age in years,aged,65 years,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2603,33538,counts,pixel,4.260945219411324,platform_constant,True,H&E,4.260945219411324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35192691;42552235,,GSM5531131,,,val,hesrt,samples/GSE182208/GSM5531131,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.44, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM5538852,GSE182867,GSE182867,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2166,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.917242125584516,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538852,,,val,sda-all,samples/GSE182867/GSM5538852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM5538853,GSE182867,GSE182867,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1130,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.917206922091654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538853,,,val,sda-all,samples/GSE182867/GSM5538853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM5538854,GSE182867,GSE182867,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1269,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.966316306562737,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538854,,,val,sda-all,samples/GSE182867/GSM5538854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5538855,GSE182867,GSE182867,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1850,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9173376538207525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538855,,,val,sda-all,samples/GSE182867/GSM5538855,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM5543479,GSE182939,GSE182939,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Sham control,adult,age rule: age with unit,not stated,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1617,32285,counts,pixel,0.7315658917695215,platform_constant,True,H&E,0.7315658917695215,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543479,,,train,hesrt,samples/GSE182939/GSM5543479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543480,GSE182939,GSE182939,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,acute kidney injury,Bi-IRI surgery,adult,age rule: age with unit,not stated,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2219,32285,counts,pixel,0.7352742413412813,platform_constant,True,H&E,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543480,,,train,hesrt,samples/GSE182939/GSM5543480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543481,GSE182939,GSE182939,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,mondo_predicate (Luna: perturbation),acute kidney injury,Bi-IRI surgery,adult,age rule: age with unit,not stated,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1893,32285,counts,pixel,0.7299270072992701,platform_constant,True,H&E,0.7299270072992701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543481,,,train,hesrt,samples/GSE182939/GSM5543481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543482,GSE182939,GSE182939,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,acute kidney injury,Bi-IRI surgery,adult,age rule: age with unit,not stated,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2212,32285,counts,pixel,0.7299270072992701,platform_constant,True,H&E,0.7299270072992701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543482,,,train,hesrt,samples/GSE182939/GSM5543482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543483,GSE182939,GSE182939,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,acute kidney injury,Bi-IRI surgery,adult,age rule: age with unit,juvenile,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1598,32285,counts,pixel,0.7299270072992701,platform_constant,True,H&E,0.7299270072992701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543483,,,train,hesrt,samples/GSE182939/GSM5543483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5554448,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,37310,25631,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554448,,,train,sda-all,samples/GSE183279/GSM5554448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554449,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,38798,25539,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554449,,,train,sda-all,samples/GSE183279/GSM5554449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554450,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,39672,25969,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554450,,,train,sda-all,samples/GSE183279/GSM5554450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554451,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,41870,26053,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554451,,,train,sda-all,samples/GSE183279/GSM5554451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554452,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,44978,26379,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554452,,,train,sda-all,samples/GSE183279/GSM5554452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554453,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,42901,25913,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554453,,,train,sda-all,samples/GSE183279/GSM5554453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554454,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,38559,26533,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554454,,,train,sda-all,samples/GSE183279/GSM5554454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554455,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36051,26284,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554455,,,train,sda-all,samples/GSE183279/GSM5554455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554456,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,43477,26092,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554456,,,train,sda-all,samples/GSE183279/GSM5554456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554457,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:3579,3579,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,41704,26338,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554457,,,train,sda-all,samples/GSE183279/GSM5554457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128246,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,13616,22734,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128246,,,train,sda-all,samples/GSE183279/GSM6128246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128247,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,29487,25770,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128247,,,train,sda-all,samples/GSE183279/GSM6128247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128248,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,27990,26876,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128248,,,train,sda-all,samples/GSE183279/GSM6128248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128249,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,20119,25832,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128249,,,train,sda-all,samples/GSE183279/GSM6128249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6128250,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,27064,25792,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128250,,,train,sda-all,samples/GSE183279/GSM6128250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM6128251,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,28499,25539,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128251,,,train,sda-all,samples/GSE183279/GSM6128251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM6128252,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,38012,27872,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128252,,,train,sda-all,samples/GSE183279/GSM6128252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128253,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,30501,27220,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128253,,,train,sda-all,samples/GSE183279/GSM6128253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128254,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36276,28154,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128254,,,train,sda-all,samples/GSE183279/GSM6128254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128255,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,33118,28251,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128255,,,train,sda-all,samples/GSE183279/GSM6128255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128256,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:20-576,20-576,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,18225,26715,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128256,,,train,sda-all,samples/GSE183279/GSM6128256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128257,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,39599,28487,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128257,,,train,sda-all,samples/GSE183279/GSM6128257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128258,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,33911,27593,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128258,,,train,sda-all,samples/GSE183279/GSM6128258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128259,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36254,28086,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128259,,,train,sda-all,samples/GSE183279/GSM6128259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128260,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36938,28729,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128260,,,train,sda-all,samples/GSE183279/GSM6128260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128261,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,41253,28283,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128261,,,train,sda-all,samples/GSE183279/GSM6128261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128262,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,40112,28437,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128262,,,train,sda-all,samples/GSE183279/GSM6128262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128263,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,39387,26994,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128263,,,train,sda-all,samples/GSE183279/GSM6128263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128264,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,32638,27087,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128264,,,train,sda-all,samples/GSE183279/GSM6128264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128265,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,28233,26566,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128265,,,train,sda-all,samples/GSE183279/GSM6128265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6128266,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,39032,27043,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128266,,,train,sda-all,samples/GSE183279/GSM6128266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128267,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-019,21-019,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36276,27124,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128267,,,train,sda-all,samples/GSE183279/GSM6128267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128268,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,33034,28635,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128268,,,train,sda-all,samples/GSE183279/GSM6128268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128269,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36650,28581,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128269,,,train,sda-all,samples/GSE183279/GSM6128269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128270,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,30673,28509,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128270,,,train,sda-all,samples/GSE183279/GSM6128270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128271,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,36846,28496,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128271,,,train,sda-all,samples/GSE183279/GSM6128271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128272,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,34958,29425,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128272,,,train,sda-all,samples/GSE183279/GSM6128272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128273,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,23010,27825,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128273,,,train,sda-all,samples/GSE183279/GSM6128273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128274,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,28191,28404,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128274,,,train,sda-all,samples/GSE183279/GSM6128274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128275,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,30878,28311,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128275,,,train,sda-all,samples/GSE183279/GSM6128275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128276,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney Cortex,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,34992,27960,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128276,,,train,sda-all,samples/GSE183279/GSM6128276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128277,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Kidney Cortex / Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,40277,29081,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128277,,,train,sda-all,samples/GSE183279/GSM6128277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6128278,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,42529,28870,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128278,,,train,sda-all,samples/GSE183279/GSM6128278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128279,GSE183279,GSE183279,An atlas of healthy and injured cell states and niches in the human kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0000362,renal medulla,Kidney Medulla,primary tissue,,,normal,luna,,Reference,not stated,luna,not stated,,unknown,not stated,,GSE183279:21-020,21-020,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,31064,27992,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128279,,,train,sda-all,samples/GSE183279/GSM6128279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047775,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3627,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047775,,,train,hesrt,samples/GSE183456/GSM6047775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047776,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4166,36601,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047776,,,train,hesrt,samples/GSE183456/GSM6047776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047777,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2627,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047777,,,train,hesrt,samples/GSE183456/GSM6047777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6047778,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,956,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047778,,,train,hesrt,samples/GSE183456/GSM6047778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047779,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1034,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047779,,,train,hesrt,samples/GSE183456/GSM6047779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047780,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1322,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047780,,,train,hesrt,samples/GSE183456/GSM6047780,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6047781,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,673,36601,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047781,,,train,hesrt,samples/GSE183456/GSM6047781,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6047782,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,673,36601,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047782,,,train,hesrt,samples/GSE183456/GSM6047782,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047783,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,560,36601,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047783,,,train,hesrt,samples/GSE183456/GSM6047783,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6047784,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,534,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047784,,,train,hesrt,samples/GSE183456/GSM6047784,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047785,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,453,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047785,,,train,hesrt,samples/GSE183456/GSM6047785,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6047786,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001851,cortex,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,461,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047786,,,train,hesrt,samples/GSE183456/GSM6047786,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM6047787,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0000958,medulla of organ,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,904,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047787,,,train,hesrt,samples/GSE183456/GSM6047787,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6047788,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,601,36601,counts,pixel,0.7633587786259542,platform_constant,True,H&E,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047788,,,train,hesrt,samples/GSE183456/GSM6047788,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6047789,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,787,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047789,,,train,hesrt,samples/GSE183456/GSM6047789,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6047790,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Diabetic Kidney Disease (DKD),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,407,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047790,,,train,hesrt,samples/GSE183456/GSM6047790,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047791,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury (AKI),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,317,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047791,,,train,hesrt,samples/GSE183456/GSM6047791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6047792,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury (AKI),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,645,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047792,,,train,hesrt,samples/GSE183456/GSM6047792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6047793,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury (AKI),,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,673,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047793,,,train,hesrt,samples/GSE183456/GSM6047793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6047794,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury (AKI),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,640,36601,counts,pixel,0.7620278021771029,platform_constant,True,H&E,0.7620278021771029,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047794,,,train,hesrt,samples/GSE183456/GSM6047794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM6047795,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury (AKI),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,507,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047795,,,train,hesrt,samples/GSE183456/GSM6047795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6047796,GSE183456,GSE183456,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury (AKI),,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,370,36601,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047796,,,train,hesrt,samples/GSE183456/GSM6047796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585200,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,SCI->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M11,M11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,483,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585200,,,train,hesrt,samples/GSE184369/GSM5585200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5585201,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB,not stated,luna,not stated,,unknown,not stated,,GSE184369:M7,M7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,619,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585201,,,train,hesrt,samples/GSE184369/GSM5585201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585202,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M14,M14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,652,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585202,,,train,hesrt,samples/GSE184369/GSM5585202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585203,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,SCI->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M11,M11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,561,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585203,,,train,hesrt,samples/GSE184369/GSM5585203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585204,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M14,M14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,574,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585204,,,train,hesrt,samples/GSE184369/GSM5585204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585205,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,SCI->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M11,M11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,444,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585205,,,train,hesrt,samples/GSE184369/GSM5585205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585206,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB,not stated,luna,not stated,,unknown,not stated,,GSE184369:M7,M7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,704,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585206,,,train,hesrt,samples/GSE184369/GSM5585206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5585207,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M14,M14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,556,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585207,,,train,hesrt,samples/GSE184369/GSM5585207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585208,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB,not stated,luna,not stated,,unknown,not stated,,GSE184369:M7,M7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,710,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,shared_positions,human_visual_review,,,,36352232,,GSM5585208,,,train,hesrt,samples/GSE184369/GSM5585208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585209,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB,not stated,luna,not stated,,unknown,not stated,,GSE184369:M7,M7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,695,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585209,,,train,hesrt,samples/GSE184369/GSM5585209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM5585210,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,SCI->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M11,M11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,585,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585210,,,train,hesrt,samples/GSE184369/GSM5585210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585211,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M14,M14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,573,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,shared_positions,human_visual_review,,,,36352232,,GSM5585211,,,train,hesrt,samples/GSE184369/GSM5585211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5585212,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,EESREHAB->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M14,M14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,642,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585212,,,train,hesrt,samples/GSE184369/GSM5585212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585214,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,SCI->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M11,M11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,696,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585214,,,train,hesrt,samples/GSE184369/GSM5585214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585215,GSE184369+GSE184371,GSE184369,The neurons that restore walking after paralysis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,SCI->EES::walking,not stated,luna,not stated,,unknown,not stated,,GSE184369:M12,M12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,550,22127,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585215,,,train,hesrt,samples/GSE184369/GSM5585215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585213,GSE184371,GSE184371,The neurons that restore walking after paralysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002792,lumbar spinal cord,spinal cord,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,711,22127,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36352232,,GSM5585213,,,train,sda-all,samples/GSE184371/GSM5585213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6439492,GSE184384,GSE184384,Epithelial Plasticity and Innate Immune Activation Promote Lung Tissue Remodeling following Respiratory Viral Infection.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005108,viral infectious disease,disease,luna,,14 days post infection with PR8,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1899,32285,counts,pixel,4.166666666666667,platform_constant,True,H&E,4.166666666666667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37726288,,GSM6439492,,,train,hesrt,samples/GSE184384/GSM6439492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6585869,GSE184384,GSE184384,Epithelial Plasticity and Innate Immune Activation Promote Lung Tissue Remodeling following Respiratory Viral Infection.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005108,viral infectious disease,disease,luna,,31 days post infection with PR8,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2769,32285,counts,pixel,4.289999891420097,platform_constant,True,H&E,4.289999891420097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37726288,,GSM6585869,,,train,hesrt,samples/GSE184384/GSM6585869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5591748,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001950,neocortex,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE184510:2339,2339,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2466,36601,counts,pixel,1.36986301369863,platform_constant,True,H&E,1.36986301369863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591748,,,train,hesrt,samples/GSE184510/GSM5591748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM5591749,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001950,neocortex,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE184510:2248,2248,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3340,36601,counts,pixel,1.36986301369863,platform_constant,True,H&E,1.36986301369863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591749,,,train,hesrt,samples/GSE184510/GSM5591749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591750,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE184510:2339,2339,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2768,36601,counts,pixel,1.3370226636621492,platform_constant,True,H&E,1.3370226636621492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591750,,,train,hesrt,samples/GSE184510/GSM5591750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591751,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE184510:2248,2248,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2280,36601,counts,pixel,1.3370226636621492,platform_constant,True,H&E,1.3370226636621492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591751,,,train,hesrt,samples/GSE184510/GSM5591751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591752,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001950,neocortex,brain,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE184510:2339,2339,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2485,36601,counts,pixel,1.36986301369863,platform_constant,True,H&E,1.36986301369863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591752,,,train,hesrt,samples/GSE184510/GSM5591752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591753,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001950,neocortex,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3349,36601,counts,um,1.0,verified,True,undetermined,4.181271889947339,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37081484,,GSM5591753,,,train,sda-all,samples/GSE184510/GSM5591753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.88, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591754,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2728,36601,counts,um,1.0,verified,True,undetermined,4.0359973086199625,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37081484,,GSM5591754,,,train,sda-all,samples/GSE184510/GSM5591754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591755,GSE184510,GSE184510,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Brain,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2337,36601,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,37081484,,GSM5591755,,,train,sda-all,samples/GSE184510/GSM5591755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6025935,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM05,MBM05,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,29536,27854,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025935,,,train,sda-all,samples/GSE185386/GSM6025935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6025936,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM05,MBM05,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,32228,29080,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025936,,,train,sda-all,samples/GSE185386/GSM6025936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6025937,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM05,MBM05,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,6308,24992,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,near_duplicate_observations;shared_positions,VERIFIED,,,,35803246,,GSM6025937,,,train,sda-all,samples/GSE185386/GSM6025937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6025938,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM06,MBM06,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,27072,29129,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025938,,,train,sda-all,samples/GSE185386/GSM6025938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6025939,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM07,MBM07,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,38462,27648,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025939,,,train,sda-all,samples/GSE185386/GSM6025939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6025940,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM08,MBM08,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,35054,28244,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025940,,,train,sda-all,samples/GSE185386/GSM6025940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025941,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM11,MBM11,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,27475,28751,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025941,,,train,sda-all,samples/GSE185386/GSM6025941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6025942,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM11,MBM11,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,39049,30314,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025942,,,train,sda-all,samples/GSE185386/GSM6025942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025943,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM11,MBM11,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,9628,27158,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,near_duplicate_observations;shared_positions,VERIFIED,,,,35803246,,GSM6025943,,,train,sda-all,samples/GSE185386/GSM6025943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025944,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM13,MBM13,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,32657,26681,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025944,,,train,sda-all,samples/GSE185386/GSM6025944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6025945,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Melanoma brain metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MBM18,MBM18,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,38423,27746,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025945,,,train,sda-all,samples/GSE185386/GSM6025945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025946,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Melanoma subcutaneous metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MPM01,MPM01,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,27325,24710,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025946,,,train,sda-all,samples/GSE185386/GSM6025946,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6025947,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Melanoma subcutaneous metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MPM01,MPM01,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,24150,25036,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025947,,,train,sda-all,samples/GSE185386/GSM6025947,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6025948,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Melanoma subcutaneous metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MPM06,MPM06,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,25461,25850,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025948,,,train,sda-all,samples/GSE185386/GSM6025948,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6025950,GSE185386,GSE185386,Melanoma Brain Metastasis Atlas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Melanoma subcutaneous metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE185386:MPM10,MPM10,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,37363,28763,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025950,,,train,sda-all,samples/GSE185386/GSM6025950,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM5616008,GSE185477,GSE185477,"Single-Cell, Single-Nucleus and Spatial RNA Sequencing of the Human Liver Identifies Hepatic Stellate Cell and Cholangiocyte Heterogeneity",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0001117,caudate lobe of liver,Liver Caudate Lobe,primary tissue,,,normal,luna,,,adult,luna,adult,30-60,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,VISIUM,,,spot,2265,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.940820702246848,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34792289,,CG-2da6052440ad,cross_gse_redeposit,GSM7697871,train,sda-all,samples/GSE185477/GSM5616008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5621965,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,413,33538,counts,pixel,0.17391199146183467,platform_constant,True,H&E,0.5000046852289655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621965,,,train,hesrt,samples/GSE185715/GSM5621965,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.71, ""life_stage"": 0.98}",,
GSM5621966,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,475,33538,counts,pixel,0.1736100645643971,platform_constant,True,H&E,0.4999936965132497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621966,,,train,hesrt,samples/GSE185715/GSM5621966,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.45, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM5621967,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,469,33538,counts,pixel,0.17211678464535718,platform_constant,True,H&E,0.4999856907041432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621967,,,train,hesrt,samples/GSE185715/GSM5621967,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.71, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5621968,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,416,33538,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621968,,,train,hesrt,samples/GSE185715/GSM5621968,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5621969,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,444,33538,counts,pixel,0.17271157167530224,platform_constant,True,H&E,0.49998991955807337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621969,,,train,hesrt,samples/GSE185715/GSM5621969,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM5621970,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,439,33538,counts,pixel,0.1724137931034483,platform_constant,True,H&E,0.50000945078347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621970,,,train,hesrt,samples/GSE185715/GSM5621970,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.92, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM5621971,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung organoid,organoid,,,normal,luna,,PFA fixed,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,533,33538,counts,pixel,0.1724135368409502,platform_constant,True,H&E,0.5000087076081786,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621971,,,train,hesrt,samples/GSE185715/GSM5621971,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621972,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2536,31053,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621972,,,train,hesrt,samples/GSE185715/GSM5621972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621973,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2399,31053,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.49998643128928244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621973,,,train,hesrt,samples/GSE185715/GSM5621973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5621974,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2554,31053,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.49998643128928244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621974,,,train,hesrt,samples/GSE185715/GSM5621974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621975,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2502,31053,counts,pixel,0.17391304347826086,platform_constant,True,H&E,0.5000077098228283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621975,,,train,hesrt,samples/GSE185715/GSM5621975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621976,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2216,31053,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.49998643128928244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621976,,,train,hesrt,samples/GSE185715/GSM5621976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.84, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5621977,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3105,31053,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621977,,,train,hesrt,samples/GSE185715/GSM5621977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621978,GSE185715,GSE185715,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,,FFPE,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3047,31053,counts,pixel,0.1721170395869191,platform_constant,True,H&E,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621978,,,train,hesrt,samples/GSE185715/GSM5621978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.88, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5631821,GSE186097,GSE186097,Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Mouse brain Olfactory bulb,primary tissue,,,normal,luna,,Wild-type,not stated,luna,not stated,,male,sample text,,,,,,Other,release v3,Pixel-seq,sequencing-based,other,,,cell,20234,32711,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36368323,,GSM5631821,,,train,sda-all,samples/GSE186097/GSM5631821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5631822,GSE186097,GSE186097,Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Mouse brain PBN region,primary tissue,,,normal,luna,,Wild-type,not stated,luna,not stated,,male,sample text,,,,,,Other,release v3,Pixel-seq,sequencing-based,other,,,cell,29911,30883,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36368323,,GSM5631822,,,train,sda-all,samples/GSE186097/GSM5631822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5643203,GSE186290,GSE186290,Spatial transcriptome analysis of gastric cancer which GAN-KP transplanted C57BL/6J mouse,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,stomach,luna,UBERON:0000945,stomach,GAN-KP tumor,xenograft,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2429,31054,counts,pixel,4.875407793576616,platform_constant,True,H&E,4.875407793576616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34931404,,GSM5643203,,,train,hesrt,samples/GSE186290/GSM5643203,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5661565,GSE186818,GSE186818,Spatial transcriptome analysis of brain region in grass puffer (Takifugu alboplumbeus),Takifugu alboplumbeus,433688,komon-damashi,Takifugu alboplumbeus,433688,,False,False,GEO organism field,Takifugu alboplumbeus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3095,26886,counts,pixel,4.283860198380393,platform_constant,True,H&E,4.283860198380393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36306789,,GSM5661565,,,train,hesrt,samples/GSE186818/GSM5661565,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5673398,GSE188257,GSE188257,Spatial transcriptomics of the ageing ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,young and aged,adult,luna,adult,3-4 months and 15-16 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,841,32285,counts,pixel,13.507416082123992,platform_constant,True,H&E,13.507416082123992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673398,,,train,hesrt,samples/GSE188257/GSM5673398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM5673399,GSE188257,GSE188257,Spatial transcriptomics of the ageing ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,young and aged,adult,luna,adult,3-4 months and 15-16 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1415,32285,counts,pixel,14.029939859788387,platform_constant,True,H&E,14.029939859788387,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673399,,,train,hesrt,samples/GSE188257/GSM5673399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM5673400,GSE188257,GSE188257,Spatial transcriptomics of the ageing ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,young and aged,adult,luna,adult,3-4 months and 15-16 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,814,32285,counts,pixel,13.815453883061046,platform_constant,True,H&E,13.815453883061046,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673400,,,train,hesrt,samples/GSE188257/GSM5673400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5673401,GSE188257,GSE188257,Spatial transcriptomics of the ageing ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,young and aged,adult,luna,adult,3-4 months and 15-16 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1193,32285,counts,pixel,13.49587379751724,platform_constant,True,H&E,13.49587379751724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673401,,,train,hesrt,samples/GSE188257/GSM5673401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5691526,GSE188888,GSE188888,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,P2 apical resection + 3 days,neonatal or infant,age rule: postnatal day,neonatal or infant,5 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,959,32285,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691526,,,val,hesrt,samples/GSE188888/GSM5691526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5691527,GSE188888,GSE188888,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,P2 apical resection + 7 days,neonatal or infant,age rule: postnatal day,neonatal or infant,10 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1374,32285,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691527,,,val,hesrt,samples/GSE188888/GSM5691527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5691528,GSE188888,GSE188888,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,P2 apical resection + 14 days,neonatal or infant,age rule: postnatal day,neonatal or infant,17 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1722,32285,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691528,,,val,hesrt,samples/GSE188888/GSM5691528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5691529,GSE188888,GSE188888,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,P2 apical resection + 21 days,juvenile,age rule: postnatal day,juvenile,24 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2095,32285,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691529,,,val,hesrt,samples/GSE188888/GSM5691529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5693665,GSE189042,GSE189042,Spatial transcriptome analysis reveals the lymph node atlas of breast cancer metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,metastasis,MONDO:0021115,luminal B breast carcinoma,disease,luna,breast cancer,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4346,33538,counts,pixel,4.135948388188244,platform_constant,True,H&E,4.135948388188244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM5693665,,,train,hesrt,samples/GSE189042/GSM5693665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695828,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,adult,age rule: bare number read as years,adult,33,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2249,33538,counts,pixel,0.44444005493471417,platform_constant,True,H&E,0.5000022964684199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695828,,,train,hesrt,samples/GSE189184/GSM5695828,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695829,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,adult,age rule: bare number read as years,adult,53,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2575,33538,counts,pixel,0.44444005493471417,platform_constant,True,H&E,0.5000022964684199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695829,,,train,hesrt,samples/GSE189184/GSM5695829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695830,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,adult,age rule: bare number read as years,adult,47,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1225,33538,counts,pixel,0.4464241228685168,platform_constant,True,H&E,0.4999880725301246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695830,,,train,hesrt,samples/GSE189184/GSM5695830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695831,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,aged,age rule: bare number read as years,aged,72,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1207,33538,counts,pixel,0.4464241228685168,platform_constant,True,H&E,0.4999880725301246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695831,,,train,hesrt,samples/GSE189184/GSM5695831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM5695832,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,aged,age rule: bare number read as years,aged,74,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1837,33538,counts,pixel,0.9038399867637336,platform_constant,True,H&E,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695832,,,train,hesrt,samples/GSE189184/GSM5695832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5695833,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,aged,age rule: bare number read as years,aged,74,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,494,33538,counts,pixel,0.9038399867637336,platform_constant,True,H&E,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695833,,,train,hesrt,samples/GSE189184/GSM5695833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5695834,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,adult,age rule: bare number read as years,adult,30,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2378,33538,counts,pixel,0.9038399867637336,platform_constant,True,H&E,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695834,,,train,hesrt,samples/GSE189184/GSM5695834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695835,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,adult,age rule: bare number read as years,adult,30,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2081,33538,counts,pixel,0.9038399867637336,platform_constant,True,H&E,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695835,,,train,hesrt,samples/GSE189184/GSM5695835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695836,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,adult,age rule: bare number read as years,adult,30,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1760,33538,counts,pixel,0.4424778761061947,platform_constant,True,H&E,0.4999992340698008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695836,,,train,hesrt,samples/GSE189184/GSM5695836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5695837,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,Healthy Control,Not inflamed,aged,age rule: bare number read as years,aged,66,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1965,33538,counts,pixel,0.4424778761061947,platform_constant,True,H&E,0.4999867578232889,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695837,,,train,hesrt,samples/GSE189184/GSM5695837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5695838,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,adult,age rule: bare number read as years,adult,55,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1187,33538,counts,pixel,0.4424778761061947,platform_constant,True,H&E,0.5000137826737198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695838,,,train,hesrt,samples/GSE189184/GSM5695838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695839,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,adult,age rule: bare number read as years,adult,60,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1055,33538,counts,pixel,0.4424778761061947,platform_constant,True,H&E,0.4999891946794602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695839,,,train,hesrt,samples/GSE189184/GSM5695839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695840,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,Ulcerative Colitis,Inflamed,aged,age rule: bare number read as years,aged,65,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1464,36601,counts,pixel,0.5208333333333334,platform_constant,True,H&E,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695840,,,train,hesrt,samples/GSE189184/GSM5695840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5695841,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,aged,age rule: bare number read as years,aged,75,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1408,36601,counts,pixel,0.5208333333333334,platform_constant,True,H&E,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695841,,,train,hesrt,samples/GSE189184/GSM5695841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695842,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,Checkpoint inhibitor induced colitis,Inflamed,adult,age rule: bare number read as years,adult,46,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1743,36601,counts,pixel,0.5208333333333334,platform_constant,True,H&E,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695842,,,train,hesrt,samples/GSE189184/GSM5695842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5695843,GSE189184+GSE189185,GSE189184,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,Healthy Control,Not inflamed,adult,age rule: bare number read as years,adult,41,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1745,36601,counts,pixel,0.5208333333333334,platform_constant,True,H&E,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695843,,,train,hesrt,samples/GSE189184/GSM5695843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5702473,GSE189487,GSE189487,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung adenocarcinoma,tumour tissue,MONDO:0005061;MONDO:0040677,lung adenocarcinoma;invasive carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,4095,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36434043,,GSM5702473,,,train,sda-all,samples/GSE189487/GSM5702473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5702474,GSE189487,GSE189487,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung adenocarcinoma,tumour tissue,MONDO:0005061;MONDO:0040677,lung adenocarcinoma;invasive carcinoma,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,4416,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36434043,,GSM5702474,,,train,sda-all,samples/GSE189487/GSM5702474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5702475,GSE189487,GSE189487,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1140,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36434043,,GSM5702475,,,train,sda-all,samples/GSE189487/GSM5702475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5702476,GSE189487,GSE189487,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung adenocarcinoma,tumour tissue,MONDO:0003218;MONDO:0005061,adenocarcinoma in situ;lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1700,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36434043,,GSM5702476,,,train,sda-all,samples/GSE189487/GSM5702476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5702477,GSE189487,GSE189487,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,3911,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36434043,,GSM5702477,,,train,sda-all,samples/GSE189487/GSM5702477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5702478,GSE189487,GSE189487,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung adenocarcinoma,tumour tissue,MONDO:0003218;MONDO:0005061,adenocarcinoma in situ;lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1760,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36434043,,GSM5702478,,,train,sda-all,samples/GSE189487/GSM5702478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713333,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,35613,21055,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713333,,,train,sda-all,samples/GSE190094/GSM5713333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713334,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30182,19867,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713334,,,train,sda-all,samples/GSE190094/GSM5713334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713335,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,34907,20738,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713335,,,train,sda-all,samples/GSE190094/GSM5713335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713336,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,27407,19802,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713336,,,train,sda-all,samples/GSE190094/GSM5713336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713337,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,15634,19367,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713337,,,train,sda-all,samples/GSE190094/GSM5713337,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713338,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,27767,18411,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713338,,,train,sda-all,samples/GSE190094/GSM5713338,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM5713339,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,27935,18818,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713339,,,train,sda-all,samples/GSE190094/GSM5713339,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713340,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,20072,18154,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713340,,,train,sda-all,samples/GSE190094/GSM5713340,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713341,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,19945,21324,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713341,,,train,sda-all,samples/GSE190094/GSM5713341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713342,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,26502,21874,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713342,,,train,sda-all,samples/GSE190094/GSM5713342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713343,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,21527,20056,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713343,,,train,sda-all,samples/GSE190094/GSM5713343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713344,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,24490,19585,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713344,,,train,sda-all,samples/GSE190094/GSM5713344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713345,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,18928,17992,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713345,,,train,sda-all,samples/GSE190094/GSM5713345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713346,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,16124,19023,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713346,,,train,sda-all,samples/GSE190094/GSM5713346,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713347,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,25441,22075,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713347,,,train,sda-all,samples/GSE190094/GSM5713347,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713348,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30535,22435,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713348,,,train,sda-all,samples/GSE190094/GSM5713348,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713349,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,34427,22122,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713349,,,train,sda-all,samples/GSE190094/GSM5713349,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713350,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,37848,22728,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713350,,,train,sda-all,samples/GSE190094/GSM5713350,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713351,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30432,21816,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713351,,,train,sda-all,samples/GSE190094/GSM5713351,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713352,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,29924,21386,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713352,,,train,sda-all,samples/GSE190094/GSM5713352,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713353,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,35501,21891,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713353,,,train,sda-all,samples/GSE190094/GSM5713353,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713354,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,38129,22718,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713354,,,train,sda-all,samples/GSE190094/GSM5713354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713355,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,31875,22259,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713355,,,train,sda-all,samples/GSE190094/GSM5713355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713356,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,38554,21781,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713356,,,train,sda-all,samples/GSE190094/GSM5713356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713357,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,40130,21623,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713357,,,train,sda-all,samples/GSE190094/GSM5713357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713358,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,40950,22767,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713358,,,train,sda-all,samples/GSE190094/GSM5713358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713359,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30874,19228,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713359,,,train,sda-all,samples/GSE190094/GSM5713359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713360,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,32562,21777,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713360,,,train,sda-all,samples/GSE190094/GSM5713360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713361,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,43264,21872,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713361,,,train,sda-all,samples/GSE190094/GSM5713361,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM5713362,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,41857,22088,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713362,,,train,sda-all,samples/GSE190094/GSM5713362,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5713363,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,37660,20228,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713363,,,train,sda-all,samples/GSE190094/GSM5713363,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713364,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,38745,21726,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713364,,,train,sda-all,samples/GSE190094/GSM5713364,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713365,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,38535,21457,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713365,,,train,sda-all,samples/GSE190094/GSM5713365,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713366,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,27708,20723,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713366,,,train,sda-all,samples/GSE190094/GSM5713366,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713367,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,39655,20988,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713367,,,train,sda-all,samples/GSE190094/GSM5713367,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713368,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,22776,19735,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713368,,,train,sda-all,samples/GSE190094/GSM5713368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713369,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,29217,20478,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713369,,,train,sda-all,samples/GSE190094/GSM5713369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713370,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,36011,21395,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713370,,,train,sda-all,samples/GSE190094/GSM5713370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713371,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,21608,20669,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713371,,,train,sda-all,samples/GSE190094/GSM5713371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713372,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,33949,20831,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713372,,,train,sda-all,samples/GSE190094/GSM5713372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713373,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,BTBR-wt/wt,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,26711,20316,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713373,,,train,sda-all,samples/GSE190094/GSM5713373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713374,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,35753,21090,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713374,,,train,sda-all,samples/GSE190094/GSM5713374,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5713375,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,24140,20750,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713375,,,train,sda-all,samples/GSE190094/GSM5713375,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5713376,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,16688,19665,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713376,,,train,sda-all,samples/GSE190094/GSM5713376,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5713377,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30625,20904,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713377,,,train,sda-all,samples/GSE190094/GSM5713377,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713378,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,18711,20596,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713378,,,train,sda-all,samples/GSE190094/GSM5713378,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713379,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,20202,18654,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713379,,,train,sda-all,samples/GSE190094/GSM5713379,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713380,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,early diabetic kidney disease,BTBR-ob/ob,adult,age rule: age with unit,adult,13 week,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,29749,20567,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713380,,,train,sda-all,samples/GSE190094/GSM5713380,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713381,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,38076,22095,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713381,,,train,sda-all,samples/GSE190094/GSM5713381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713382,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,25839,20773,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713382,,,train,sda-all,samples/GSE190094/GSM5713382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713383,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,38528,21439,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713383,,,train,sda-all,samples/GSE190094/GSM5713383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713384,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,40045,21804,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713384,,,train,sda-all,samples/GSE190094/GSM5713384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713385,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,37805,21263,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713385,,,train,sda-all,samples/GSE190094/GSM5713385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713386,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,25579,21331,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713386,,,train,sda-all,samples/GSE190094/GSM5713386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713387,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,26078,22256,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713387,,,train,sda-all,samples/GSE190094/GSM5713387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713388,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,28788,21986,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713388,,,train,sda-all,samples/GSE190094/GSM5713388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713389,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,33116,22025,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713389,,,train,sda-all,samples/GSE190094/GSM5713389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713390,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,32317,22209,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713390,,,train,sda-all,samples/GSE190094/GSM5713390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713391,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,35855,21180,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713391,,,train,sda-all,samples/GSE190094/GSM5713391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5713392,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,29746,21104,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713392,,,train,sda-all,samples/GSE190094/GSM5713392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713393,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,19069,19758,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713393,,,train,sda-all,samples/GSE190094/GSM5713393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713394,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30582,18792,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713394,,,train,sda-all,samples/GSE190094/GSM5713394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713395,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30206,22274,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713395,,,train,sda-all,samples/GSE190094/GSM5713395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713396,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,34945,21599,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713396,,,train,sda-all,samples/GSE190094/GSM5713396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713397,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,35117,21820,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713397,,,train,sda-all,samples/GSE190094/GSM5713397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713398,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,29528,22026,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713398,,,train,sda-all,samples/GSE190094/GSM5713398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713399,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,31057,20814,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713399,,,train,sda-all,samples/GSE190094/GSM5713399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713400,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,26260,21520,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713400,,,train,sda-all,samples/GSE190094/GSM5713400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713401,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,20320,19858,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713401,,,train,sda-all,samples/GSE190094/GSM5713401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713402,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,normal,luna,control,UMOD-WT/WT,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,21894,20113,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713402,,,train,sda-all,samples/GSE190094/GSM5713402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713403,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,18898,20652,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713403,,,train,sda-all,samples/GSE190094/GSM5713403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713404,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,17363,19852,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713404,,,train,sda-all,samples/GSE190094/GSM5713404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713405,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,19886,20794,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713405,,,train,sda-all,samples/GSE190094/GSM5713405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713406,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,14666,19839,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713406,,,train,sda-all,samples/GSE190094/GSM5713406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713407,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,12132,20156,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713407,,,train,sda-all,samples/GSE190094/GSM5713407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713408,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,11031,21796,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713408,,,train,sda-all,samples/GSE190094/GSM5713408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713409,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,18162,20720,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713409,,,train,sda-all,samples/GSE190094/GSM5713409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713410,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,16818,20997,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713410,,,train,sda-all,samples/GSE190094/GSM5713410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713411,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,12541,20854,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713411,,,train,sda-all,samples/GSE190094/GSM5713411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713412,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,12533,20620,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713412,,,train,sda-all,samples/GSE190094/GSM5713412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713413,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,22430,21247,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713413,,,train,sda-all,samples/GSE190094/GSM5713413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713414,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,11005,21292,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713414,,,train,sda-all,samples/GSE190094/GSM5713414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713415,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,28577,20935,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713415,,,train,sda-all,samples/GSE190094/GSM5713415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713416,GSE190094,GSE190094,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney cross-section,primary tissue,,,disease,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,adult,age rule: age with unit,adult,6 month,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,20424,20226,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,35372810,,GSM5713416,,,train,sda-all,samples/GSE190094/GSM5713416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5726156,GSE190595,GSE190595,10X Visium Spatial transcriptomics of murine colon at d14 (mucosa healing) in B cell sufficient/deficient mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3934,31053,counts,pixel,0.9748793052273198,platform_constant,True,H&E,0.9748793052273198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5726156,,,train,hesrt,samples/GSE190595/GSM5726156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5726157,GSE190595,GSE190595,10X Visium Spatial transcriptomics of murine colon at d14 (mucosa healing) in B cell sufficient/deficient mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,perturbation,luna,,B cell depleted,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3547,31053,counts,pixel,0.9748793052273198,platform_constant,True,H&E,0.9748793052273198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5726157,,,train,hesrt,samples/GSE190595/GSM5726157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5732357,GSE190811+GSE190870,GSE190811,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,human breast cancer,metastasis,MONDO:0004953;MONDO:0024339,invasive ductal breast carcinoma;lymph node neoplasm,disease,luna,Invasive ductal carcinoma,Lymph node metastasis,not stated,luna,not stated,,unknown,not stated,,GSE190811:Patient_3,Patient_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3055,33931,counts,pixel,0.27396848990154254,platform_constant,True,H&E,0.49999332700382454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732357,,,train,hesrt,samples/GSE190811/GSM5732357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5732358,GSE190811+GSE190870,GSE190811,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,human breast cancer,metastasis,MONDO:0004953;MONDO:0024339,invasive ductal breast carcinoma;lymph node neoplasm,disease,luna,Invasive ductal carcinoma,Lymph node metastasis,not stated,luna,not stated,,unknown,not stated,,GSE190811:Patient_6,Patient_6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4454,33931,counts,pixel,0.2739715745128152,platform_constant,True,H&E,0.4999964352213171,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732358,,,train,hesrt,samples/GSE190811/GSM5732358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5732359,GSE190811+GSE190870,GSE190811,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,human breast cancer,metastasis,MONDO:0004953;MONDO:0024339,invasive ductal breast carcinoma;lymph node neoplasm,disease,luna,Invasive ductal carcinoma,Lymph node metastasis,not stated,luna,not stated,,unknown,not stated,,GSE190811:Patient_7,Patient_7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4859,33931,counts,pixel,0.2739715745128152,platform_constant,True,H&E,0.49999895642877507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732359,,,train,hesrt,samples/GSE190811/GSM5732359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5732360,GSE190811+GSE190870,GSE190811,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,human breast cancer,metastasis,MONDO:0004953;MONDO:0024339,invasive ductal breast carcinoma;lymph node neoplasm,disease,luna,Invasive ductal carcinoma,Lymph node metastasis,not stated,luna,not stated,,unknown,not stated,,GSE190811:Patient_8,Patient_8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4553,33931,counts,pixel,0.273972602739726,platform_constant,True,H&E,0.5000061650000617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732360,,,train,hesrt,samples/GSE190811/GSM5732360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5733935,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,SCI/Rostral/cross sections/7&14dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1498,31053,counts,um,1.0,verified,True,H&E-like (heuristic),4.0574300753522206,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733935,,,train,sda-all,samples/GSE190910/GSM5733935,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5733936,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,SCI/Central/coronal sections/7dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2005,31053,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.9755072576914263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733936,,,train,sda-all,samples/GSE190910/GSM5733936,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5733937,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,SCI/Central/cross sections/7&14dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1540,31053,counts,um,1.0,verified,True,H&E-like (heuristic),3.9528855539986267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733937,,,train,sda-all,samples/GSE190910/GSM5733937,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5733938,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,SCI/Caudal/cross sections/7&14dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1514,31053,counts,um,1.0,verified,True,H&E-like (heuristic),4.003624312490957,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733938,,,train,sda-all,samples/GSE190910/GSM5733938,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5733939,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,SCI/Central/coronal sections/14dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2170,31053,counts,um,1.0,verified,True,H&E-like (heuristic),3.9881687083989026,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733939,,,train,sda-all,samples/GSE190910/GSM5733939,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5733940,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,,,normal,luna,,Sham/Central/cross sections/Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,756,31053,counts,um,1.0,verified,True,H&E-like (heuristic),3.9642196370803706,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733940,,,train,sda-all,samples/GSE190910/GSM5733940,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5733941,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,,,normal,luna,,Sham/Central/coronal & cross sections/Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1380,31053,counts,um,1.0,verified,True,H&E-like (heuristic),3.9882032200994995,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733941,,,train,sda-all,samples/GSE190910/GSM5733941,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5733942,GSE190910,GSE190910,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord tissue,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,SCI/Central/coronal sections/7&14dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2650,31053,counts,um,1.0,verified,True,H&E-like (heuristic),4.050420353701036,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733942,,,train,sda-all,samples/GSE190910/GSM5733942,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6657936,GSE192402,GSE192402,"Multi-modal single-cell and whole-genome sequencing of minute, frozen specimens to propel clinical applications",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Melanoma subcutaneous metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192402:ribas,ribas,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,33760,27987,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,36624340,,GSM6657936,,,train,sda-all,samples/GSE192402/GSM6657936,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6657937,GSE192402,GSE192402,"Multi-modal single-cell and whole-genome sequencing of minute, frozen specimens to propel clinical applications",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Melanoma subcutaneous metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192402:ribas,ribas,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,SlideSeqV2,,,bead,15051,25531,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,36624340,,GSM6657937,,,train,sda-all,samples/GSE192402/GSM6657937,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM5747437,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P02,P02,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,774,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747437,,,val,sda-all,samples/GSE192460/GSM5747437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747438,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P03,P03,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,999,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747438,,,val,sda-all,samples/GSE192460/GSM5747438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747439,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P05,P05,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1026,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747439,,,val,sda-all,samples/GSE192460/GSM5747439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747440,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P08,P08,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,765,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747440,,,val,sda-all,samples/GSE192460/GSM5747440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747441,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P02,P02,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,736,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747441,,,val,sda-all,samples/GSE192460/GSM5747441,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747442,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P01,P01,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,554,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747442,,,val,sda-all,samples/GSE192460/GSM5747442,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747443,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P01,P01,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,844,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747443,,,val,sda-all,samples/GSE192460/GSM5747443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747444,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P03,P03,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,609,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747444,,,val,sda-all,samples/GSE192460/GSM5747444,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747445,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P04,P04,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,306,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747445,,,val,sda-all,samples/GSE192460/GSM5747445,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747446,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P04,P04,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,441,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747446,,,val,sda-all,samples/GSE192460/GSM5747446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747447,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P04,P04,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,628,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747447,,,val,sda-all,samples/GSE192460/GSM5747447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747448,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P06,P06,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,240,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747448,,,val,sda-all,samples/GSE192460/GSM5747448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747449,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P07,P07,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,974,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747449,,,val,sda-all,samples/GSE192460/GSM5747449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM5747450,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P08,P08,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1067,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747450,,,val,sda-all,samples/GSE192460/GSM5747450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747451,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P10,P10,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1047,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747451,,,val,sda-all,samples/GSE192460/GSM5747451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747452,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P10,P10,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,438,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747452,,,val,sda-all,samples/GSE192460/GSM5747452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747453,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P11,P11,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,698,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747453,,,val,sda-all,samples/GSE192460/GSM5747453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747454,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P12,P12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,545,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747454,,,val,sda-all,samples/GSE192460/GSM5747454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM5747455,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P12,P12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,58,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747455,,,val,sda-all,samples/GSE192460/GSM5747455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747456,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P13,P13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,705,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747456,,,val,sda-all,samples/GSE192460/GSM5747456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747457,GSE192460,GSE192460,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE192460:P13,P13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,667,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36750099,,GSM5747457,,,val,sda-all,samples/GSE192460/GSM5747457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5764414,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,StSt,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1646,31053,counts,pixel,4.9071244386756785,platform_constant,True,H&E,4.9071244386756785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764414,,,train,hesrt,samples/GSE192742/GSM5764414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764415,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,StSt,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1651,31053,counts,pixel,4.9071244386756785,platform_constant,True,H&E,4.9071244386756785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764415,,,train,hesrt,samples/GSE192742/GSM5764415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764416,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,StSt,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1604,31053,counts,pixel,4.651302314530204,platform_constant,True,H&E,4.651302314530204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764416,,,train,hesrt,samples/GSE192742/GSM5764416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764417,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,StSt,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2286,31053,counts,pixel,4.651302314530204,platform_constant,True,H&E,4.651302314530204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764417,,,train,hesrt,samples/GSE192742/GSM5764417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764418,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0016479,capsule of liver,liver,primary tissue,,,normal,luna,,StSt,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,438,31053,counts,pixel,4.501062208462857,platform_constant,True,H&E,4.501062208462857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764418,,,train,hesrt,samples/GSE192742/GSM5764418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM5764419,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,SD,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1279,31053,counts,pixel,4.506371979570342,platform_constant,True,H&E,4.506371979570342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764419,,,train,hesrt,samples/GSE192742/GSM5764419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5764420,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,WD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2348,31053,counts,pixel,4.500398394063028,platform_constant,True,H&E,4.500398394063028,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764420,,,train,hesrt,samples/GSE192742/GSM5764420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM5764421,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,WD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2076,31053,counts,pixel,4.51035391582303,platform_constant,True,H&E,4.51035391582303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764421,,,train,hesrt,samples/GSE192742/GSM5764421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM5764422,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,WD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2254,31053,counts,pixel,4.498407210470884,platform_constant,True,H&E,4.498407210470884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764422,,,train,hesrt,samples/GSE192742/GSM5764422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM5764423,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,StSt,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1708,31053,counts,pixel,4.5690265855903,platform_constant,True,H&E,4.5690265855903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764423,,,train,hesrt,samples/GSE192742/GSM5764423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764424,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,Steatotic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1248,32738,counts,pixel,4.497787751400223,platform_constant,True,H&E,4.497787751400223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764424,,,train,hesrt,samples/GSE192742/GSM5764424,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5764425,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,Steatotic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,532,32738,counts,pixel,4.4980088185324965,platform_constant,True,H&E,4.4980088185324965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764425,,,train,hesrt,samples/GSE192742/GSM5764425,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5764426,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2501,32738,counts,pixel,4.575176396326853,platform_constant,True,H&E,4.575176396326853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764426,,,train,hesrt,samples/GSE192742/GSM5764426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764427,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,Steatotic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1185,32738,counts,pixel,4.819864254554368,platform_constant,True,H&E,4.819864254554368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764427,,,train,hesrt,samples/GSE192742/GSM5764427,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5764428,GSE192742,GSE192742,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1423,32738,counts,pixel,4.5046020402362315,platform_constant,True,H&E,4.5046020402362315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764428,,,train,hesrt,samples/GSE192742/GSM5764428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5773453,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Young,adult,age rule: age with unit,juvenile,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3259,32285,counts,pixel,0.5469464442041558,platform_constant,True,H&E,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773453,,,train,hesrt,samples/GSE193107/GSM5773453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM5773454,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Young,adult,age rule: age with unit,adult,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3593,32285,counts,pixel,0.546448087431694,platform_constant,True,H&E,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773454,,,train,hesrt,samples/GSE193107/GSM5773454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM5773455,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Young,adult,age rule: age with unit,not stated,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3400,32285,counts,pixel,0.5469464442041558,platform_constant,True,H&E,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773455,,,train,hesrt,samples/GSE193107/GSM5773455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.86, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM5773456,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Young,adult,age rule: age with unit,not stated,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3294,32285,counts,pixel,0.546448087431694,platform_constant,True,H&E,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773456,,,train,hesrt,samples/GSE193107/GSM5773456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM5773457,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Old,aged,age rule: age with unit,aged,28 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3681,32285,counts,pixel,0.5469464442041558,platform_constant,True,H&E,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773457,,,train,hesrt,samples/GSE193107/GSM5773457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5773458,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Old,aged,age rule: age with unit,aged,28 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3543,32285,counts,pixel,0.546448087431694,platform_constant,True,H&E,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773458,,,train,hesrt,samples/GSE193107/GSM5773458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5773459,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Old,aged,age rule: age with unit,aged,28 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3269,32285,counts,pixel,0.5469464442041558,platform_constant,True,H&E,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773459,,,train,hesrt,samples/GSE193107/GSM5773459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5773460,GSE193107,GSE193107,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Old,aged,age rule: age with unit,aged,28 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3050,32285,counts,pixel,0.546448087431694,platform_constant,True,H&E,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773460,,,train,hesrt,samples/GSE193107/GSM5773460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5808054,GSE193460,GSE193460,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,WT-Cas9,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1906,32289,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,35290801,,GSM5808054,,,train,sda-all,samples/GSE193460/GSM5808054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5808055,GSE193460,GSE193460,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,WT-Cas9,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1931,32289,counts,um,1.0,verified,True,undetermined,4.610657745044323,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35290801,,GSM5808055,,,train,sda-all,samples/GSE193460/GSM5808055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5808056,GSE193460,GSE193460,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,WT-Cas9,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1244,32289,counts,um,1.0,verified,True,undetermined,4.348513289147683,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35290801,,GSM5808056,,,train,sda-all,samples/GSE193460/GSM5808056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5808057,GSE193460,GSE193460,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,WT-Cas9,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2546,32289,counts,um,1.0,verified,True,undetermined,4.62795215600362,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35290801,,GSM5808057,,,train,sda-all,samples/GSE193460/GSM5808057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5833528,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0100342,malignant glioma,disease,luna,"Diffuse midline glioma, H3K27M-mutant",Recurrent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4337,36601,counts,pixel,4.124077627558917,platform_constant,True,H&E,4.124077627558917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833528,,,train,hesrt,samples/GSE194329/GSM5833528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833529,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0100342,malignant glioma,disease,luna,"Diffuse midline glioma, H3K27M-mutant",Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2305,36601,counts,pixel,3.8600119319307864,platform_constant,True,H&E,3.8600119319307864,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833529,,,train,hesrt,samples/GSE194329/GSM5833529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833530,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0100342,malignant glioma,disease,luna,"Diffuse midline glioma, H3K27M-mutant",Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1063,36601,counts,pixel,4.028032315030445,platform_constant,True,H&E,4.028032315030445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833530,,,train,hesrt,samples/GSE194329/GSM5833530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5833531,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0100342,malignant glioma,disease,luna,"Diffuse midline glioma, H3K27M-mutant",Recurrent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1056,36601,counts,pixel,4.010919648524724,platform_constant,True,H&E,4.010919648524724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833531,,,train,hesrt,samples/GSE194329/GSM5833531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833532,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0100342,malignant glioma,disease,luna,"Diffuse midline glioma, H3K27M-mutant",Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2128,36601,counts,pixel,4.011893855633693,platform_constant,True,H&E,4.011893855633693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833532,,,train,hesrt,samples/GSE194329/GSM5833532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833533,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,Secondary glioblastoma,Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4764,36601,counts,pixel,4.137084733134966,platform_constant,True,H&E,4.137084733134966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833533,,,train,hesrt,samples/GSE194329/GSM5833533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833534,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,"Glioblastoma, IDH-wt",Recurrent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2891,36601,counts,pixel,4.174390192974844,platform_constant,True,H&E,4.174390192974844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833534,,,train,hesrt,samples/GSE194329/GSM5833534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833535,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,"Glioblastoma, IDH-wt",Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1775,36601,counts,pixel,4.058433490987309,platform_constant,True,H&E,4.058433490987309,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833535,,,train,hesrt,samples/GSE194329/GSM5833535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833536,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,Secondary glioblastoma,Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2540,36601,counts,pixel,3.9456985618233245,platform_constant,True,H&E,3.9456985618233245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833536,,,train,hesrt,samples/GSE194329/GSM5833536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833537,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,"Glioblastoma, IDH-wt",Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2203,36601,counts,pixel,3.9590050400519052,platform_constant,True,H&E,3.9590050400519052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833537,,,train,hesrt,samples/GSE194329/GSM5833537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833538,GSE194329,GSE194329,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0100342,malignant glioma,disease,luna,,Peritumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2171,36601,counts,pixel,3.9366665774224336,platform_constant,True,H&E,3.9366665774224336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833538,,,train,hesrt,samples/GSE194329/GSM5833538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5833739,GSE194338,GSE194338,Excitatory SST neurons in the medial paralemniscal nucleus control repetitive self-grooming and encode reward,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,adult,age rule: postnatal day,adult,60 postnatal days,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3651,32286,counts,pixel,3.894000023519748,platform_constant,True,H&E,3.894000023519748,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM5833739,,,train,hesrt,samples/GSE194338/GSM5833739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.84, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM7016921,GSE195575,GSE195575,mousemodel_Heptablastoma spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1890,31053,counts,pixel,0.8928215559724615,platform_constant,True,H&E,0.8928215559724615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016921,,,test,hesrt,samples/GSE195575/GSM7016921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM7016922,GSE195575,GSE195575,mousemodel_Heptablastoma spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3430,31053,counts,pixel,0.9258862368658796,platform_constant,True,H&E,0.9258862368658796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016922,,,test,hesrt,samples/GSE195575/GSM7016922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7016923,GSE195575,GSE195575,mousemodel_Heptablastoma spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2396,31053,counts,pixel,0.8928571428571429,platform_constant,True,H&E,0.8928571428571429,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016923,,,test,hesrt,samples/GSE195575/GSM7016923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7016924,GSE195575,GSE195575,mousemodel_Heptablastoma spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2408,31053,counts,pixel,0.8928215559724615,platform_constant,True,H&E,0.8928215559724615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016924,,,test,hesrt,samples/GSE195575/GSM7016924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7016925,GSE195575,GSE195575,mousemodel_Heptablastoma spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2699,31053,counts,pixel,0.9090533456791586,platform_constant,True,H&E,0.9090533456791586,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016925,,,test,hesrt,samples/GSE195575/GSM7016925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7016926,GSE195575,GSE195575,mousemodel_Heptablastoma spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4458,31053,counts,pixel,0.8859623899229175,platform_constant,True,H&E,0.8859623899229175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016926,,,test,hesrt,samples/GSE195575/GSM7016926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5841550,GSE195598,GSE195598,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Nodes,primary tissue,,,normal,luna,,Wild-type,adult,age rule: age with unit,adult,5.5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,833,32287,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841550,,,train,hesrt,samples/GSE195598/GSM5841550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5841551,GSE195598,GSE195598,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Nodes,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,Early arthritis,Early arthritis,adult,age rule: age with unit,adult,5.5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1489,32287,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841551,,,train,hesrt,samples/GSE195598/GSM5841551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5841552,GSE195598,GSE195598,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Nodes,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,Advanced arthritis,Advanced arthritis,adult,age rule: age with unit,adult,8.5–9 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2015,32287,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841552,,,train,hesrt,samples/GSE195598/GSM5841552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5841553,GSE195598,GSE195598,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Nodes,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,Advanced arthritis,Advanced arthritis,adult,age rule: age with unit,adult,8.5–9 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1782,32287,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841553,,,train,hesrt,samples/GSE195598/GSM5841553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844711,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,neonatal or infant,age rule: bare number read as years,neonatal or infant,0.5,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2236,36601,counts,pixel,0.4716981132075472,platform_constant,True,H&E,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844711,,,val,hesrt,samples/GSE195661/GSM5844711,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844712,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,2,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1959,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844712,,,val,hesrt,samples/GSE195661/GSM5844712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5844713,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,2,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,979,36601,counts,pixel,4.143999979611512,platform_constant,True,H&E,4.143999979611512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844713,,,val,hesrt,samples/GSE195661/GSM5844713,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5844714,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,neonatal or infant,age rule: bare number read as years,neonatal or infant,0.9,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3060,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844714,,,val,hesrt,samples/GSE195661/GSM5844714,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844715,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,5,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2705,36601,counts,pixel,0.4716981132075472,platform_constant,True,H&E,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844715,,,val,hesrt,samples/GSE195661/GSM5844715,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844716,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,6,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1616,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844716,,,val,hesrt,samples/GSE195661/GSM5844716,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5844717,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,neonatal or infant,age rule: bare number read as years,neonatal or infant,0.6,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3027,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844717,,,val,hesrt,samples/GSE195661/GSM5844717,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844718,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,1.9,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1842,36601,counts,pixel,4.143999979611512,platform_constant,True,H&E,4.143999979611512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844718,,,val,hesrt,samples/GSE195661/GSM5844718,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844719,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,2,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3153,36601,counts,pixel,4.143999979611512,platform_constant,True,H&E,4.143999979611512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844719,,,val,hesrt,samples/GSE195661/GSM5844719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5844720,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,6,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2743,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844720,,,val,hesrt,samples/GSE195661/GSM5844720,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844721,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,3,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2051,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844721,,,val,hesrt,samples/GSE195661/GSM5844721,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844722,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,1.9,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2961,36601,counts,pixel,4.145999979643136,platform_constant,True,H&E,4.145999979643136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844722,,,val,hesrt,samples/GSE195661/GSM5844722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5844723,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,neonatal or infant,age rule: bare number read as years,neonatal or infant,0.9,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3620,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844723,,,val,hesrt,samples/GSE195661/GSM5844723,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844724,GSE195661,GSE195661,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,surgically resected tumor,tumour tissue,MONDO:0016698,ependymoma,disease,luna,ependymoma PFA subgroup,,juvenile,age rule: bare number read as years,juvenile,5,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1262,36601,counts,pixel,0.8,platform_constant,True,H&E,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844724,,,val,hesrt,samples/GSE195661/GSM5844724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5862787,GSE196208,GSE196208,Single-Cell Transcriptome Profiling Reveals Intratumoral Heterogeneity and Molecular Features in Ductal Carcinoma In Situ of the Breast,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1521,33538,counts,um,1.0,verified,True,H&E,4.280565266668684,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35852797,,GSM5862787,,,train,sda-all,samples/GSE196208/GSM5862787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5885623,GSE196506,GSE196506,Spatial Transcriptomics-based Identification of Molecular Markers for Nanomedicine Distribution in Tumor Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,uberon_chain,UBERON:0000310,breast,solid tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1229,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36180396,,GSM5885623,,,train,sda-all,samples/GSE196506/GSM5885623,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM5907077,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_1,AD_1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,188,21587,counts,pixel,4.51919993381866,platform_constant,True,H&E,4.51919993381866,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907077,,,train,hesrt,samples/GSE197023/GSM5907077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM5907078,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_2,AD_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,335,21587,counts,pixel,4.308768757974459,platform_constant,True,H&E,4.308768757974459,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907078,,,train,hesrt,samples/GSE197023/GSM5907078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907079,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_3,AD_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,791,21587,counts,pixel,4.336683255770365,platform_constant,True,H&E,4.336683255770365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907079,,,train,hesrt,samples/GSE197023/GSM5907079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM5907080,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_4,AD_4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1177,21587,counts,pixel,4.308768757974459,platform_constant,True,H&E,4.308768757974459,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907080,,,train,hesrt,samples/GSE197023/GSM5907080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM5907081,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_5,AD_5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1081,21587,counts,pixel,4.183879949452944,platform_constant,True,H&E,4.183879949452944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907081,,,train,hesrt,samples/GSE197023/GSM5907081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM5907082,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_6,AD_6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1045,21587,counts,pixel,4.32783373401641,platform_constant,True,H&E,4.32783373401641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907082,,,train,hesrt,samples/GSE197023/GSM5907082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM5907083,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_7,AD_7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1032,21587,counts,pixel,4.318762936749759,platform_constant,True,H&E,4.318762936749759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907083,,,train,hesrt,samples/GSE197023/GSM5907083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907084,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis non-lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,non-lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_1,AD_1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,95,21587,counts,pixel,4.500875230679936,platform_constant,True,H&E,4.500875230679936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907084,,,train,hesrt,samples/GSE197023/GSM5907084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907085,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis non-lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,non-lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_2,AD_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,419,21587,counts,pixel,4.469383107572957,platform_constant,True,H&E,4.469383107572957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907085,,,train,hesrt,samples/GSE197023/GSM5907085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907086,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis non-lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,non-lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_3,AD_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,754,21587,counts,pixel,4.4891151937915765,platform_constant,True,H&E,4.4891151937915765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907086,,,train,hesrt,samples/GSE197023/GSM5907086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM5907088,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis non-lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,non-lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_5,AD_5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,975,21587,counts,pixel,4.32783373401641,platform_constant,True,H&E,4.32783373401641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907088,,,train,hesrt,samples/GSE197023/GSM5907088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907089,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis non-lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,non-lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_6,AD_6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,815,21587,counts,pixel,4.336683255770365,platform_constant,True,H&E,4.336683255770365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907089,,,train,hesrt,samples/GSE197023/GSM5907089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907090,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Atopic dermatitis non-lesional skin,primary tissue,MONDO:0004980,atopic eczema,disease,luna,atopic dermatitis,non-lesional,not stated,luna,not stated,,unknown,not stated,,GSE197023:AD_7,AD_7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,878,21587,counts,pixel,4.4891151937915765,platform_constant,True,H&E,4.4891151937915765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907090,,,train,hesrt,samples/GSE197023/GSM5907090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907091,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,healthy,not stated,luna,not stated,,unknown,not stated,,GSE197023:HE_1,HE_1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,527,21587,counts,pixel,4.504504504504495,platform_constant,True,H&E,4.504504504504495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907091,,,train,hesrt,samples/GSE197023/GSM5907091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907092,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,healthy,not stated,luna,not stated,,unknown,not stated,,GSE197023:HE_2,HE_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,722,21587,counts,pixel,4.587155963302738,platform_constant,True,H&E,4.587155963302738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907092,,,train,hesrt,samples/GSE197023/GSM5907092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907093,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,healthy,not stated,luna,not stated,,unknown,not stated,,GSE197023:HE_3,HE_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,629,21587,counts,pixel,4.3366832557703425,platform_constant,True,H&E,4.3366832557703425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907093,,,train,hesrt,samples/GSE197023/GSM5907093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907094,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,healthy,not stated,luna,not stated,,unknown,not stated,,GSE197023:HE_4,HE_4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,838,21587,counts,pixel,4.318762936749759,platform_constant,True,H&E,4.318762936749759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907094,,,train,hesrt,samples/GSE197023/GSM5907094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907095,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,healthy,not stated,luna,not stated,,unknown,not stated,,GSE197023:HE_5,HE_5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,653,21587,counts,pixel,4.327833734016389,platform_constant,True,H&E,4.327833734016389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907095,,,train,hesrt,samples/GSE197023/GSM5907095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907096,GSE197023,GSE197023,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,healthy,not stated,luna,not stated,,unknown,not stated,,GSE197023:HE_6,HE_6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,788,21587,counts,pixel,4.29973791938996,platform_constant,True,H&E,4.29973791938996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907096,,,train,hesrt,samples/GSE197023/GSM5907096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5910280,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,38263,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910280,,,train,sda-all,samples/GSE197150/GSM5910280,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910281,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,33845,613,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910281,,,train,sda-all,samples/GSE197150/GSM5910281,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910282,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,23390,607,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910282,,,train,sda-all,samples/GSE197150/GSM5910282,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910283,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,16178,610,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910283,,,train,sda-all,samples/GSE197150/GSM5910283,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5910284,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34305,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910284,,,train,sda-all,samples/GSE197150/GSM5910284,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5910285,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,27708,613,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910285,,,train,sda-all,samples/GSE197150/GSM5910285,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5910286,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,38964,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910286,,,train,sda-all,samples/GSE197150/GSM5910286,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM5910287,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14837,613,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910287,,,train,sda-all,samples/GSE197150/GSM5910287,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910288,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,22461,610,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910288,,,train,sda-all,samples/GSE197150/GSM5910288,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM5910289,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6717,613,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910289,,,train,sda-all,samples/GSE197150/GSM5910289,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5910290,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,31875,609,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910290,,,train,sda-all,samples/GSE197150/GSM5910290,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5910291,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,49596,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910291,,,train,sda-all,samples/GSE197150/GSM5910291,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910292,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7270,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910292,,,train,sda-all,samples/GSE197150/GSM5910292,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910293,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12972,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910293,,,train,sda-all,samples/GSE197150/GSM5910293,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM5910294,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,20583,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910294,,,train,sda-all,samples/GSE197150/GSM5910294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM5910295,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34616,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910295,,,train,sda-all,samples/GSE197150/GSM5910295,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5910296,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,21116,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910296,,,train,sda-all,samples/GSE197150/GSM5910296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM5910297,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15542,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910297,,,train,sda-all,samples/GSE197150/GSM5910297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5910298,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15543,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910298,,,train,sda-all,samples/GSE197150/GSM5910298,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5910299,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,21137,102,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910299,,,train,sda-all,samples/GSE197150/GSM5910299,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910300,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8181,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910300,,,train,sda-all,samples/GSE197150/GSM5910300,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM5910301,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34963,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910301,,,train,sda-all,samples/GSE197150/GSM5910301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.87, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5910302,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13636,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910302,,,train,sda-all,samples/GSE197150/GSM5910302,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910303,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13004,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910303,,,train,sda-all,samples/GSE197150/GSM5910303,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5910304,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7955,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910304,,,train,sda-all,samples/GSE197150/GSM5910304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910305,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34178,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910305,,,train,sda-all,samples/GSE197150/GSM5910305,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM5910306,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34839,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910306,,,train,sda-all,samples/GSE197150/GSM5910306,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5910307,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,21940,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910307,,,train,sda-all,samples/GSE197150/GSM5910307,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5910308,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,16419,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910308,,,train,sda-all,samples/GSE197150/GSM5910308,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5910309,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14805,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910309,,,train,sda-all,samples/GSE197150/GSM5910309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.86, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910310,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,31932,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910310,,,train,sda-all,samples/GSE197150/GSM5910310,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910311,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,19819,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910311,,,train,sda-all,samples/GSE197150/GSM5910311,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5910312,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,18343,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910312,,,train,sda-all,samples/GSE197150/GSM5910312,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5910313,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,33896,94,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910313,,,train,sda-all,samples/GSE197150/GSM5910313,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 0.99}",,
GSM5910314,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5132,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910314,,,train,sda-all,samples/GSE197150/GSM5910314,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5910315,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,4893,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910315,,,train,sda-all,samples/GSE197150/GSM5910315,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5910316,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10538,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910316,,,train,sda-all,samples/GSE197150/GSM5910316,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910317,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14849,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910317,,,train,sda-all,samples/GSE197150/GSM5910317,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM5910318,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,22415,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910318,,,train,sda-all,samples/GSE197150/GSM5910318,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5910319,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9998,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910319,,,train,sda-all,samples/GSE197150/GSM5910319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5910320,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12319,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910320,,,train,sda-all,samples/GSE197150/GSM5910320,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM5910321,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12846,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910321,,,train,sda-all,samples/GSE197150/GSM5910321,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910322,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,33625,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910322,,,train,sda-all,samples/GSE197150/GSM5910322,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM5910323,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14373,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910323,,,train,sda-all,samples/GSE197150/GSM5910323,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5910324,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,33531,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910324,,,train,sda-all,samples/GSE197150/GSM5910324,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910325,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,4905,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910325,,,train,sda-all,samples/GSE197150/GSM5910325,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910326,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,21140,126,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910326,,,train,sda-all,samples/GSE197150/GSM5910326,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7709892,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,20654,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709892,,,train,sda-all,samples/GSE197150/GSM7709892,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM7709893,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10126,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709893,,,train,sda-all,samples/GSE197150/GSM7709893,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7709894,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8666,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709894,,,train,sda-all,samples/GSE197150/GSM7709894,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7709895,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,40435,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709895,,,train,sda-all,samples/GSE197150/GSM7709895,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709896,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34692,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709896,,,train,sda-all,samples/GSE197150/GSM7709896,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709897,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7432,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709897,,,train,sda-all,samples/GSE197150/GSM7709897,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7709898,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17873,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709898,,,train,sda-all,samples/GSE197150/GSM7709898,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709899,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,19283,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709899,,,train,sda-all,samples/GSE197150/GSM7709899,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM7709900,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,26829,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709900,,,train,sda-all,samples/GSE197150/GSM7709900,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM7709901,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11540,610,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709901,,,train,sda-all,samples/GSE197150/GSM7709901,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7709902,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6987,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709902,,,train,sda-all,samples/GSE197150/GSM7709902,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.8, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7709903,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,23983,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709903,,,train,sda-all,samples/GSE197150/GSM7709903,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM7709904,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15182,611,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709904,,,train,sda-all,samples/GSE197150/GSM7709904,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7709905,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,25765,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709905,,,train,sda-all,samples/GSE197150/GSM7709905,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709906,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11635,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709906,,,train,sda-all,samples/GSE197150/GSM7709906,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7709907,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,28490,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709907,,,train,sda-all,samples/GSE197150/GSM7709907,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709908,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,19501,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709908,,,train,sda-all,samples/GSE197150/GSM7709908,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.79, ""life_stage"": 0.99}",,
GSM7709909,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,40008,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709909,,,train,sda-all,samples/GSE197150/GSM7709909,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7709910,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17599,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709910,,,train,sda-all,samples/GSE197150/GSM7709910,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7709911,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34662,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709911,,,train,sda-all,samples/GSE197150/GSM7709911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM7709912,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5960,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709912,,,train,sda-all,samples/GSE197150/GSM7709912,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM7709913,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,F,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,26197,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709913,,,train,sda-all,samples/GSE197150/GSM7709913,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8291572,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,,,normal,luna,control,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,36027,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM8291572,,,train,sda-all,samples/GSE197150/GSM8291572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8291573,GSE197150,GSE197150,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001890,forebrain,8-week forebrain organoid,organoid,MONDO:0005260,autism,disease,luna,case,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,M,,,fresh frozen,OCT-embedded,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34182,614,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM8291573,,,train,sda-all,samples/GSE197150/GSM8291573,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5914541,GSE197317,GSE197317,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human fetal pancreas,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,15 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1550,36601,counts,pixel,4.082352443284472,platform_constant,True,H&E,4.082352443284472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914541,,,test,hesrt,samples/GSE197317/GSM5914541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914542,GSE197317,GSE197317,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human fetal pancreas,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,15 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1546,36601,counts,pixel,4.154724554752076,platform_constant,True,H&E,4.154724554752076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914542,,,test,hesrt,samples/GSE197317/GSM5914542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914543,GSE197317,GSE197317,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human fetal pancreas,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,18 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1498,36601,counts,pixel,4.140707417968897,platform_constant,True,H&E,4.140707417968897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914543,,,test,hesrt,samples/GSE197317/GSM5914543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914544,GSE197317,GSE197317,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human fetal pancreas,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,18 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1196,36601,counts,pixel,4.155089574999639,platform_constant,True,H&E,4.155089574999639,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914544,,,test,hesrt,samples/GSE197317/GSM5914544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914545,GSE197317,GSE197317,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human fetal pancreas,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,20 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2126,36601,counts,pixel,4.108176053261535,platform_constant,True,H&E,4.108176053261535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914545,,,test,hesrt,samples/GSE197317/GSM5914545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5914546,GSE197317,GSE197317,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,human fetal pancreas,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,20 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1719,36601,counts,pixel,4.206454808290927,platform_constant,True,H&E,4.206454808290927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914546,,,test,hesrt,samples/GSE197317/GSM5914546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5935792,GSE198012,GSE198012,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,luna,UBERON:0001347,white adipose tissue,white adipose,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1493,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37651193,,GSM5935792,,,val,sda-all,samples/GSE198012/GSM5935792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5935793,GSE198012,GSE198012,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,luna,UBERON:0001347,white adipose tissue,white adipose,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2036,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37651193,,GSM5935793,,,val,sda-all,samples/GSE198012/GSM5935793,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5935794,GSE198012,GSE198012,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,luna,UBERON:0001347,white adipose tissue,white adipose,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3394,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37651193,,GSM5935794,,,val,sda-all,samples/GSE198012/GSM5935794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM5935795,GSE198012,GSE198012,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,luna,UBERON:0001347,white adipose tissue,white adipose,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1994,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37651193,,GSM5935795,,,val,sda-all,samples/GSE198012/GSM5935795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM5939574,GSE198128,GSE198128,Spatiotemporal transcriptomes of orchid flowers,Phalaenopsis aphrodite,212056,,Phalaenopsis aphrodite,212056,,False,False,GEO organism field,Phalaenopsis aphrodite,,plant,luna,,,Flower,primary tissue,,,normal,luna,,,not stated,luna,not stated,bud 1-6,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2379,28903,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.0646739289732485,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36095130,,GSM5939574,,,train,sda-all,samples/GSE198128/GSM5939574,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM5939575,GSE198128,GSE198128,Spatiotemporal transcriptomes of orchid flowers,Phalaenopsis aphrodite,212056,,Phalaenopsis aphrodite,212056,,False,False,GEO organism field,Phalaenopsis aphrodite,,plant,luna,,,Flower,primary tissue,,,normal,luna,,,not stated,luna,not stated,bud 7,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2467,28903,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.022652073473422,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36095130,,GSM5939575,,,train,sda-all,samples/GSE198128/GSM5939575,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM5939576,GSE198128,GSE198128,Spatiotemporal transcriptomes of orchid flowers,Phalaenopsis aphrodite,212056,,Phalaenopsis aphrodite,212056,,False,False,GEO organism field,Phalaenopsis aphrodite,,plant,luna,,,Flower,primary tissue,,,normal,luna,,,not stated,luna,not stated,bud 8,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3407,28903,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.1036272544834755,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36095130,,GSM5939576,,,train,sda-all,samples/GSE198128/GSM5939576,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM5945505,GSE198353,GSE198353,Integration of whole transcriptome spatial profiling with protein markers,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,mouse spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2653,32306,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.766195386948848,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36593397,,GSM5945505,,,train,sda-all,samples/GSE198353/GSM5945505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5945507,GSE198353,GSE198353,Integration of whole transcriptome spatial profiling with protein markers,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,mouse spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2768,32306,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.765819696129341,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36593397,,GSM5945507,,,train,sda-all,samples/GSE198353/GSM5945507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5945509,GSE198353,GSE198353,Integration of whole transcriptome spatial profiling with protein markers,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,mouse breast tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1978,32286,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.349964703275878,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36593397,,GSM5945509,,,train,sda-all,samples/GSE198353/GSM5945509,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5956095,GSE198745,GSE198745,Single-cell and spatially resolved analysis uncovers cell heterogeneity of breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Primary Breast Tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,untreated,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4186,36601,counts,pixel,3.772585909990478,platform_constant,True,H&E,3.772585909990478,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35241110,,GSM5956095,,,train,hesrt,samples/GSE198745/GSM5956095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM5970832,GSE199348,GSE199348,Molecular and cellular characterization of planarian stem cell microenvironments,Schmidtea mediterranea,79327,freshwater planarian,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,other,luna,UBERON:0002415,tail,Intact animal and tail fragments,primary tissue,,,perturbation,luna,,WT Intact animal embedded with tail fragments 6 hours post amputation,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,slide-seqV2,,,bead,24821,30636,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM5970832,,,train,sda-all,samples/GSE199348/GSM5970832,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.55, ""uberon"": 0.52, ""life_stage"": 0.59}",disease_status;uberon;life_stage,low_confidence_annotation
GSM5970833,GSE199348,GSE199348,Molecular and cellular characterization of planarian stem cell microenvironments,Schmidtea mediterranea,79327,freshwater planarian,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,other,luna,UBERON:0002415,tail,Intact animal and tail fragments,primary tissue,,,perturbation,luna,,WT Intact animal embedded with tail fragments 48 hours post amputation,adult,luna,adult,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,slide-seqV2,,,bead,30146,31442,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM5970833,,,train,sda-all,samples/GSE199348/GSM5970833,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.54, ""disease_status"": 0.55, ""uberon"": 0.34, ""life_stage"": 0.51}",sample_kind;disease_status;uberon;life_stage,low_confidence_annotation
GSM5970834,GSE199348,GSE199348,Molecular and cellular characterization of planarian stem cell microenvironments,Schmidtea mediterranea,79327,freshwater planarian,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,other,luna,UBERON:0002415,tail,Intact animal and tail fragments,primary tissue,,,perturbation,luna,,WT Intact animal embedded with tail fragments 6 hours post amputation,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,slide-seqV2,,,bead,32319,30494,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM5970834,,,train,sda-all,samples/GSE199348/GSM5970834,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.61, ""uberon"": 0.36, ""life_stage"": 0.43}",uberon;life_stage,low_confidence_annotation
GSM5970835,GSE199348,GSE199348,Molecular and cellular characterization of planarian stem cell microenvironments,Schmidtea mediterranea,79327,freshwater planarian,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,other,luna,UBERON:0002415,tail,Intact animal and tail fragments,primary tissue,,,perturbation,luna,,WT Intact animal embedded with tail fragments 48 hours post amputation,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seqV2,sequencing-based,slide-seqV2,,,bead,26024,31511,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM5970835,,,train,sda-all,samples/GSE199348/GSM5970835,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.55, ""disease_status"": 0.6000000000000001, ""uberon"": 0.44, ""life_stage"": 0.59}",sample_kind;uberon;life_stage,low_confidence_annotation
GSM5979972,GSE199659,GSE199659,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,skeletal muscle (quadriceps),primary tissue,,,normal,luna,,wildtype,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,GSE199659:C57BL10,C57BL10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2348,32285,counts,pixel,4.425559461139513,platform_constant,True,H&E,4.425559461139513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979972,,,val,hesrt,samples/GSE199659/GSM5979972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5979973,GSE199659,GSE199659,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,skeletal muscle (quadriceps),primary tissue,,,normal,luna,,wildtype,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,GSE199659:DBA/2J,DBA/2J,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1426,32285,counts,pixel,4.320223474349918,platform_constant,True,H&E,4.320223474349918,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979973,,,val,hesrt,samples/GSE199659/GSM5979973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5979974,GSE199659,GSE199659,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,skeletal muscle (quadriceps),primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,affected DMD mouse model,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,GSE199659:mdx,mdx,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1884,32285,counts,pixel,4.319048192683448,platform_constant,True,H&E,4.319048192683448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979974,,,val,hesrt,samples/GSE199659/GSM5979974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5979975,GSE199659,GSE199659,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,skeletal muscle (quadriceps),primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,affected DMD mouse model,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,GSE199659:D2-mdx,D2-mdx,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1370,32285,counts,pixel,4.319048192683448,platform_constant,True,H&E,4.319048192683448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979975,,,val,hesrt,samples/GSE199659/GSM5979975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6030901,GSE200310,GSE200310,Spatial transcriptome sequencing of primary nasopharyngeal carcinoma tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Nasopharyngeal carcinoma tissue,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,nasopharyngeal carcinoma,Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1331,36601,counts,pixel,4.053927581768989,platform_constant,True,H&E,4.053927581768989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37024479,,GSM6030901,,,train,hesrt,samples/GSE200310/GSM6030901,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.26, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6030902,GSE200310,GSE200310,Spatial transcriptome sequencing of primary nasopharyngeal carcinoma tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Nasopharyngeal carcinoma tissue,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,nasopharyngeal carcinoma,Primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1089,36601,counts,pixel,4.053504659561155,platform_constant,True,H&E,4.053504659561155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37024479,,GSM6030902,,,train,hesrt,samples/GSE200310/GSM6030902,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6042726,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"Control, Day 7",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2774,32285,counts,pixel,4.68184978547314,platform_constant,True,H&E,4.68184978547314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042726,,,val,hesrt,samples/GSE200720/GSM6042726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042727,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"CD4 Depleted, Day 7",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2177,32285,counts,pixel,4.166666666666667,platform_constant,True,H&E,4.166666666666667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042727,,,val,hesrt,samples/GSE200720/GSM6042727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042728,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"Control, Day 21",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2659,32285,counts,pixel,4.160812872143392,platform_constant,True,H&E,4.160812872143392,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042728,,,val,hesrt,samples/GSE200720/GSM6042728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM6042729,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"CD4 Depleted, Day 21",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2495,32285,counts,pixel,4.309704312711209,platform_constant,True,H&E,4.309704312711209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042729,,,val,hesrt,samples/GSE200720/GSM6042729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6042730,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"Control, Day 7",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2254,32285,counts,pixel,4.705703140620075,platform_constant,True,H&E,4.705703140620075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042730,,,val,hesrt,samples/GSE200720/GSM6042730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042731,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"CD4 Depleted, Day 7",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2714,32285,counts,pixel,4.700969604771208,platform_constant,True,H&E,4.700969604771208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042731,,,val,hesrt,samples/GSE200720/GSM6042731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042732,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"CD4 Depleted, Day 21",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3018,32285,counts,pixel,4.704243328363627,platform_constant,True,H&E,4.704243328363627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042732,,,val,hesrt,samples/GSE200720/GSM6042732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6042733,GSE200720,GSE200720,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,LCMV Cl13 infection,"CD4 Depleted, Day 21",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1669,32285,counts,pixel,4.706079180720907,platform_constant,True,H&E,4.706079180720907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042733,,,val,hesrt,samples/GSE200720/GSM6042733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM7164986,GSE200751,GSE200751,MacroH2A restricts melanoma progression via inhibition of chemokine expression in cancer-associated fibroblasts.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,,,Melanoma tissue section,tumour tissue,MONDO:0005105;MONDO:0004992,melanoma;cancer,disease,luna,,WT,not stated,luna,not stated,,female,extracted field,female,GSE200751:19333,19333,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1330,32285,counts,pixel,4.391874989108155,platform_constant,True,H&E,4.391874989108155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37605008,,GSM7164986,,,train,hesrt,samples/GSE200751/GSM7164986,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7164987,GSE200751,GSE200751,MacroH2A restricts melanoma progression via inhibition of chemokine expression in cancer-associated fibroblasts.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,,,Melanoma tissue section,tumour tissue,MONDO:0005105;MONDO:0004992,melanoma;cancer,disease,luna,,dKO,not stated,luna,not stated,,female,extracted field,female,GSE200751:19331,19331,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1739,32285,counts,pixel,4.391874989108155,platform_constant,True,H&E,4.391874989108155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37605008,,GSM7164987,,,train,hesrt,samples/GSE200751/GSM7164987,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM6068593,GSE201610,GSE201610,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2663,32285,counts,pixel,4.042823995461373,platform_constant,True,H&E,4.042823995461373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-e9ad1b4f3195,cross_gse_redeposit,GSM6939162,train,hesrt,samples/GSE201610/GSM6068593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6068594,GSE201610,GSE201610,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2663,32285,counts,pixel,4.042361072344879,platform_constant,True,H&E,4.042361072344879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-2411b62788f7,cross_gse_redeposit,GSM6939164,train,hesrt,samples/GSE201610/GSM6068594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6068595,GSE201610,GSE201610,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2838,32285,counts,pixel,4.043518543653036,platform_constant,True,H&E,4.043518543653036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-c913fa2a4863,cross_gse_redeposit,GSM6939166,train,hesrt,samples/GSE201610/GSM6068595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6068596,GSE201610,GSE201610,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2550,32285,counts,pixel,4.04236107234486,platform_constant,True,H&E,4.04236107234486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-eb7a2767080d,cross_gse_redeposit,GSM6939163,train,hesrt,samples/GSE201610/GSM6068596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6068597,GSE201610,GSE201610,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2936,32285,counts,pixel,4.043981449331831,platform_constant,True,H&E,4.043981449331831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-8e26dac8956f,cross_gse_redeposit,GSM6939165,train,hesrt,samples/GSE201610/GSM6068597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6068598,GSE201610,GSE201610,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2778,32285,counts,pixel,4.042823995461373,platform_constant,True,H&E,4.042823995461373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-cf63363e6152,cross_gse_redeposit,GSM6939167,train,hesrt,samples/GSE201610/GSM6068598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6086615,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 1,patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,469,36601,counts,pixel,4.504216396693779,platform_constant,True,H&E,4.504216396693779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086615,,,train,hesrt,samples/GSE202011/GSM6086615,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086616,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 1,patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,660,36601,counts,pixel,4.5818099338836085,platform_constant,True,H&E,4.5818099338836085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086616,,,train,hesrt,samples/GSE202011/GSM6086616,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM6086617,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 2,patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,459,36601,counts,pixel,4.489999984285006,platform_constant,True,H&E,4.489999984285006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086617,,,train,hesrt,samples/GSE202011/GSM6086617,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM6086618,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 2,patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1044,36601,counts,pixel,4.449107029516154,platform_constant,True,H&E,4.449107029516154,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086618,,,train,hesrt,samples/GSE202011/GSM6086618,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086619,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 2,patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,447,36601,counts,pixel,4.633999909891887,platform_constant,True,H&E,4.633999909891887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086619,,,train,hesrt,samples/GSE202011/GSM6086619,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086620,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 2,patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,230,36601,counts,pixel,4.407981431230953,platform_constant,True,H&E,4.407981431230953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,CG-37a98aa01676,cross_gse_redeposit,GSM7648697,train,hesrt,samples/GSE202011/GSM6086620,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086621,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 2,patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1183,36601,counts,pixel,4.530357007172951,platform_constant,True,H&E,4.530357007172951,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086621,,,train,hesrt,samples/GSE202011/GSM6086621,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086622,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 2,patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,662,36601,counts,pixel,4.548715142082444,platform_constant,True,H&E,4.548715142082444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,CG-153129d73187,cross_gse_redeposit,GSM7648698,train,hesrt,samples/GSE202011/GSM6086622,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6086623,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 1,patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,660,36601,counts,pixel,4.551529578207669,platform_constant,True,H&E,4.551529578207669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086623,,,train,hesrt,samples/GSE202011/GSM6086623,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086624,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 1,patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,331,36601,counts,pixel,4.40769753197887,platform_constant,True,H&E,4.40769753197887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086624,,,train,hesrt,samples/GSE202011/GSM6086624,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086625,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 3,patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,684,36601,counts,pixel,4.562000090327603,platform_constant,True,H&E,4.562000090327603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086625,,,train,hesrt,samples/GSE202011/GSM6086625,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086626,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 3,patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,873,36601,counts,pixel,4.433999911320025,platform_constant,True,H&E,4.433999911320025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086626,,,train,hesrt,samples/GSE202011/GSM6086626,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM6086627,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 3,patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,705,36601,counts,pixel,4.5487151420824565,platform_constant,True,H&E,4.5487151420824565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086627,,,train,hesrt,samples/GSE202011/GSM6086627,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM6086628,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 3,patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1122,36601,counts,pixel,4.513392781769191,platform_constant,True,H&E,4.513392781769191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086628,,,train,hesrt,samples/GSE202011/GSM6086628,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM6086629,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 3,patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,763,36601,counts,pixel,4.32856741552915,platform_constant,True,H&E,4.32856741552915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086629,,,train,hesrt,samples/GSE202011/GSM6086629,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086630,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 4,patient 4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,983,36601,counts,pixel,4.518643262720346,platform_constant,True,H&E,4.518643262720346,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086630,,,train,hesrt,samples/GSE202011/GSM6086630,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086631,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 4,patient 4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,929,36601,counts,pixel,4.626615672609428,platform_constant,True,H&E,4.626615672609428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086631,,,train,hesrt,samples/GSE202011/GSM6086631,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.66, ""life_stage"": 0.99}",,
GSM6086632,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 5,patient 5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,830,36601,counts,pixel,4.66890489910025,platform_constant,True,H&E,4.66890489910025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086632,,,train,hesrt,samples/GSE202011/GSM6086632,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM6086633,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 5,patient 5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,955,36601,counts,pixel,4.588825326129652,platform_constant,True,H&E,4.588825326129652,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086633,,,train,hesrt,samples/GSE202011/GSM6086633,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086634,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 4,patient 4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,654,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.5272579039528855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37267384;41743834,,GSM6086634,,,train,sda-all,samples/GSE202011/GSM6086634,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086635,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Non-Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 4,patient 4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,685,36601,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,FAIL,,,37267384;41743834,,GSM6086635,,,train,sda-all,samples/GSE202011/GSM6086635,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM6086636,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0005083,psoriasis,disease,luna,Psoriasis (PsO),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 6,patient 6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1448,36601,counts,pixel,4.529335177045596,platform_constant,True,H&E,4.529335177045596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086636,,,train,hesrt,samples/GSE202011/GSM6086636,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086637,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0011849;MONDO:0005083,psoriatic arthritis;psoriasis,disease,luna,Psoriatic Arthritis (PsA),Lesional,not stated,luna,not stated,,unknown,not stated,,GSE202011:patient 5,patient 5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,651,36601,counts,pixel,4.680244123701367,platform_constant,True,H&E,4.680244123701367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086637,,,train,hesrt,samples/GSE202011/GSM6086637,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086638,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 1,Healthy Volunteer 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,786,36601,counts,pixel,4.477343090751624,platform_constant,True,H&E,4.477343090751624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086638,,,train,hesrt,samples/GSE202011/GSM6086638,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086639,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 1,Healthy Volunteer 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1070,36601,counts,pixel,4.450779763829714,platform_constant,True,H&E,4.450779763829714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086639,,,train,hesrt,samples/GSE202011/GSM6086639,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086640,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 2,Healthy Volunteer 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,634,36601,counts,pixel,4.588924783860095,platform_constant,True,H&E,4.588924783860095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086640,,,train,hesrt,samples/GSE202011/GSM6086640,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM6086641,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 2,Healthy Volunteer 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,977,36601,counts,pixel,4.405357124310601,platform_constant,True,H&E,4.405357124310601,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086641,,,train,hesrt,samples/GSE202011/GSM6086641,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086642,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 3,Healthy Volunteer 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1099,36601,counts,pixel,4.663706139945142,platform_constant,True,H&E,4.663706139945142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086642,,,train,hesrt,samples/GSE202011/GSM6086642,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 0.9400000000000001}",,
GSM6086643,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 3,Healthy Volunteer 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1203,36601,counts,pixel,4.68437865198333,platform_constant,True,H&E,4.68437865198333,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086643,,,train,hesrt,samples/GSE202011/GSM6086643,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 0.99}",,
GSM6086644,GSE202011,GSE202011,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,GSE202011:Healthy Volunteer 2,Healthy Volunteer 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1031,36601,counts,pixel,4.609957772020336,platform_constant,True,H&E,4.609957772020336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086644,,,train,hesrt,samples/GSE202011/GSM6086644,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6108346,GSE202322,GSE202322,Spatial sequencing of young and aged lungs following influenza A virus infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,Day 0 Young,adult,age rule: age with unit,adult,16 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1986,32285,counts,pixel,4.756792259097891,platform_constant,True,H&E,4.756792259097891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108346,,,test,hesrt,samples/GSE202322/GSM6108346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM6108347,GSE202322,GSE202322,Spatial sequencing of young and aged lungs following influenza A virus infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,Day 0 Aged,aged,age rule: age with unit,aged,80 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2218,32285,counts,pixel,4.713707366382172,platform_constant,True,H&E,4.713707366382172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108347,,,test,hesrt,samples/GSE202322/GSM6108347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6108348,GSE202322,GSE202322,Spatial sequencing of young and aged lungs following influenza A virus infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,Day 3 Young,adult,age rule: age with unit,not stated,16 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2486,32285,counts,pixel,5.1312048706291575,platform_constant,True,H&E,5.1312048706291575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108348,,,test,hesrt,samples/GSE202322/GSM6108348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM6108349,GSE202322,GSE202322,Spatial sequencing of young and aged lungs following influenza A virus infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,Day 3 Aged,aged,age rule: age with unit,aged,80 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2520,32285,counts,pixel,5.112593740315617,platform_constant,True,H&E,5.112593740315617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108349,,,test,hesrt,samples/GSE202322/GSM6108349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6108350,GSE202322,GSE202322,Spatial sequencing of young and aged lungs following influenza A virus infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,Day 9 Young,adult,age rule: age with unit,not stated,16 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2847,32285,counts,pixel,4.700657071609306,platform_constant,True,H&E,4.700657071609306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108350,,,test,hesrt,samples/GSE202322/GSM6108350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM6108351,GSE202322,GSE202322,Spatial sequencing of young and aged lungs following influenza A virus infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,Day 9 Aged,aged,age rule: age with unit,aged,80 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2969,32285,counts,pixel,4.730517953305762,platform_constant,True,H&E,4.730517953305762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108351,,,test,hesrt,samples/GSE202322/GSM6108351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6125919,GSE202623,GSE202623,Spatial Transcriptomics correlated Electron Microscopy [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,18 weeks,unknown,not stated,,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,97459,385,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37433806,,GSM6125919,,,test,sda-all,samples/GSE202623/GSM6125919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6125920,GSE202623,GSE202623,Spatial Transcriptomics correlated Electron Microscopy [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,18 weeks,unknown,not stated,,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,123651,385,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37433806,,GSM6125920,,,test,sda-all,samples/GSE202623/GSM6125920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6125921,GSE202623,GSE202623,Spatial Transcriptomics correlated Electron Microscopy [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,18 weeks,unknown,not stated,,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,126858,385,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37433806,,GSM6125921,,,test,sda-all,samples/GSE202623/GSM6125921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6171782,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,perturbation,luna,,cornoil,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2549,32285,counts,pixel,4.175681545587936,platform_constant,True,H&E,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171782,,,train,hesrt,samples/GSE203424/GSM6171782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171783,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate (Luna: perturbation),,tamoxifen,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3025,32285,counts,pixel,4.174543086023732,platform_constant,True,H&E,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171783,,,train,hesrt,samples/GSE203424/GSM6171783,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171784,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,cornoil,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2731,32285,counts,pixel,4.175681545587936,platform_constant,True,H&E,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171784,,,train,hesrt,samples/GSE203424/GSM6171784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171785,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,tamoxifen,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3513,32285,counts,pixel,4.175681545587936,platform_constant,True,H&E,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171785,,,train,hesrt,samples/GSE203424/GSM6171785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171786,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,normal,luna,,cornoil,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2841,32285,counts,pixel,4.174543086023732,platform_constant,True,H&E,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171786,,,train,hesrt,samples/GSE203424/GSM6171786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171787,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate (Luna: perturbation),,tamoxifen,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3126,32285,counts,pixel,4.174543086023732,platform_constant,True,H&E,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171787,,,train,hesrt,samples/GSE203424/GSM6171787,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171788,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,cornoil,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2601,32285,counts,pixel,4.175681545587938,platform_constant,True,H&E,4.175681545587938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171788,,,train,hesrt,samples/GSE203424/GSM6171788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171789,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,tamoxifen,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3078,32285,counts,pixel,4.175681545587936,platform_constant,True,H&E,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171789,,,train,hesrt,samples/GSE203424/GSM6171789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171790,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,,,normal,luna,,cornoil,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2647,32285,counts,pixel,4.175681545587938,platform_constant,True,H&E,4.175681545587938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171790,,,train,hesrt,samples/GSE203424/GSM6171790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171791,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,tamoxifen,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2731,32285,counts,pixel,4.174543086023732,platform_constant,True,H&E,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171791,,,train,hesrt,samples/GSE203424/GSM6171791,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171792,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,cornoil,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2416,32285,counts,pixel,3.969651893362377,platform_constant,True,H&E,3.969651893362377,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171792,,,train,hesrt,samples/GSE203424/GSM6171792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171793,GSE203424,GSE203424,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,coronal brain section,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,tamoxifen,adult,age rule: age with unit,not stated,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2775,32285,counts,pixel,4.175681545587936,platform_constant,True,H&E,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171793,,,train,hesrt,samples/GSE203424/GSM6171793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6176208,GSE203552,GSE203552,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,biopsy tissue,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,PCNSL,,not stated,luna,not stated,,unknown,not stated,,GSE203552:p1,p1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1083,17943,counts,pixel,4.056116269325808,platform_constant,True,H&E,4.056116269325808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176208,,,test,hesrt,samples/GSE203552/GSM6176208,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6176213,GSE203552,GSE203552,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,biopsy tissue,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,PCNSL,,not stated,luna,not stated,,unknown,not stated,,GSE203552:p2,p2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,917,17943,counts,pixel,4.051561528603966,platform_constant,True,H&E,4.051561528603966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176213,,,test,hesrt,samples/GSE203552/GSM6176213,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6176214,GSE203552,GSE203552,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,biopsy tissue,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,PCNSL,,not stated,luna,not stated,,unknown,not stated,,GSE203552:p3,p3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1512,17943,counts,pixel,4.071299285740243,platform_constant,True,H&E,4.071299285740243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176214,,,test,hesrt,samples/GSE203552/GSM6176214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6176215,GSE203552,GSE203552,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,biopsy tissue,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,PCNSL,,not stated,luna,not stated,,unknown,not stated,,GSE203552:p7,p7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1090,17943,counts,pixel,4.0978693255259975,platform_constant,True,H&E,4.0978693255259975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176215,,,test,hesrt,samples/GSE203552/GSM6176215,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6177599,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,Breast carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2384,33538,counts,pixel,4.55487518674277,platform_constant,True,H&E,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177599,,,train,hesrt,samples/GSE203612/GSM6177599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177601,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,Breast carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1863,33538,counts,pixel,4.15436199657636,platform_constant,True,H&E,4.15436199657636,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177601,,,train,hesrt,samples/GSE203612/GSM6177601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177603,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,Breast carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2346,33538,counts,pixel,4.061749972481647,platform_constant,True,H&E,4.061749972481647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177603,,,train,hesrt,samples/GSE203612/GSM6177603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177607,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Stomach,tumour tissue,MONDO:0004992,cancer,disease,luna,Gastric stromal tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2624,33538,counts,pixel,4.313965060578363,platform_constant,True,H&E,4.313965060578363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177607,,,train,hesrt,samples/GSE203612/GSM6177607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6177609,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Stomach,tumour tissue,MONDO:0004992,cancer,disease,luna,Gastric stromal tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2493,33538,counts,pixel,4.164773866085841,platform_constant,True,H&E,4.164773866085841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177609,,,train,hesrt,samples/GSE203612/GSM6177609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177612,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,Liver hepatocellular carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1661,33538,counts,pixel,4.2046119010610585,platform_constant,True,H&E,4.2046119010610585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177612,,,train,hesrt,samples/GSE203612/GSM6177612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177614,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,Ovarian carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1762,33538,counts,pixel,4.448249773850994,platform_constant,True,H&E,4.448249773850994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177614,,,train,hesrt,samples/GSE203612/GSM6177614,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177617,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,Ovarian carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1661,33538,counts,pixel,4.456444264891725,platform_constant,True,H&E,4.456444264891725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177617,,,train,hesrt,samples/GSE203612/GSM6177617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177618,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1789,33538,counts,pixel,4.258897086980845,platform_constant,True,H&E,4.258897086980845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177618,,,train,hesrt,samples/GSE203612/GSM6177618,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177623,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,Endometrium,tumour tissue,MONDO:0002447,endometrial carcinoma,disease,luna,Endometrial carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1351,33538,counts,pixel,4.367445372552445,platform_constant,True,H&E,4.367445372552445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177623,,,train,hesrt,samples/GSE203612/GSM6177623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177624,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Xenograft,xenograft,MONDO:0005105;MONDO:0004992,melanoma;cancer,disease,luna,melanoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3039,41797,counts,pixel,4.168554277009604,platform_constant,True,H&E,4.168554277009604,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177624,,,train,hesrt,samples/GSE203612/GSM6177624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6177625,GSE203612,GSE203612,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0003103,compound organ,Xenograft,xenograft,MONDO:0005105;MONDO:0004992,melanoma;cancer,disease,luna,melanoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2556,41797,counts,pixel,4.203667296842034,platform_constant,True,H&E,4.203667296842034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177625,,,train,hesrt,samples/GSE203612/GSM6177625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.2, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6204635,GSE205054+GSE205055,GSE205054,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2387,19831,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6204635,,,train,sda-all,samples/GSE205054/GSM6204635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6204636,GSE205054+GSE205055,GSE205054,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2373,19859,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6204636,,,train,sda-all,samples/GSE205054/GSM6204636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6204637,GSE205054+GSE205055,GSE205054,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,8886,21478,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6204637,,,train,sda-all,samples/GSE205054/GSM6204637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6799937,GSE205054+GSE205055,GSE205054,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2187,20900,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6799937,,,train,sda-all,samples/GSE205054/GSM6799937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6206885,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002421,hippocampal formation,Human hippocampus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,29293,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6206885,,,train,sda-all,samples/GSE205055/GSM6206885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6753041,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2498,20046,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753041,,,train,sda-all,samples/GSE205055/GSM6753041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6753042,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2499,18718,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753042,,,train,sda-all,samples/GSE205055/GSM6753042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6753043,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,9215,22914,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753043,,,train,sda-all,samples/GSE205055/GSM6753043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM6753044,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,9752,25881,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753044,,,train,sda-all,samples/GSE205055/GSM6753044,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 0.71}",,
GSM6753045,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,9370,23415,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753045,,,train,sda-all,samples/GSE205055/GSM6753045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM6753046,GSE205055,GSE205055,Spatial epigenome-transcriptome co-profiling of mammalian tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,fresh frozen,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,9548,22731,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753046,,,train,sda-all,samples/GSE205055/GSM6753046,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM6210023,GSE205307,GSE205307,Single-cell RNA sequencing reveals myeloid and T cell co-stimulation mediated by IL-7 anti-cancer immunotherapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,unknown,luna,,,tissue specimen,primary tissue,MONDO:0004992,cancer,disease,mondo_predicate,,Drug_Control (PBS),adult,age rule: age with unit,juvenile,6–8 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2221,32285,counts,pixel,4.160651460412479,platform_constant,True,H&E,4.160651460412479,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38424167,10.1038/s41416-024-02617-7,GSM6210023,,,test,hesrt,samples/GSE205307/GSM6210023,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.73, ""disease_status"": 0.27, ""uberon"": NaN, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6210024,GSE205307,GSE205307,Single-cell RNA sequencing reveals myeloid and T cell co-stimulation mediated by IL-7 anti-cancer immunotherapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,unknown,luna,,,tissue specimen,unknown,MONDO:0004992,cancer,disease,mondo_predicate (Luna: perturbation),,Drug_rIL7 (recombinant IL7),adult,age rule: age with unit,juvenile,6–8 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1951,32285,counts,pixel,4.068724069995314,platform_constant,True,H&E,4.068724069995314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38424167,10.1038/s41416-024-02617-7,GSM6210024,,,test,hesrt,samples/GSE205307/GSM6210024,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6219587,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,PBS,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,721,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219587,,,val,sda-all,samples/GSE205707/GSM6219587,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6219588,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,PBS,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,762,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219588,,,val,sda-all,samples/GSE205707/GSM6219588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6219589,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,PBS,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,796,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219589,,,val,sda-all,samples/GSE205707/GSM6219589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM6219590,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,PBS,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,660,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219590,,,val,sda-all,samples/GSE205707/GSM6219590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6219591,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ITD1,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,866,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219591,,,val,sda-all,samples/GSE205707/GSM6219591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6219592,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ITD1,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,654,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219592,,,val,sda-all,samples/GSE205707/GSM6219592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6219593,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ITD1,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,633,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219593,,,val,sda-all,samples/GSE205707/GSM6219593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6219594,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ITD1,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,895,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6219594,,,val,sda-all,samples/GSE205707/GSM6219594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6896311,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,595,1000,counts,pixel,0.3071343144389113,platform_constant,True,H&E,0.5000062390298768,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1172/jci.insight.162835,GSM6896311,,,val,hesrt,samples/GSE205707/GSM6896311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6896312,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,455,1000,counts,pixel,0.30806861461831603,platform_constant,True,H&E,0.5000068389065571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1172/jci.insight.162835,GSM6896312,,,val,hesrt,samples/GSE205707/GSM6896312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6896313,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,837,1000,counts,pixel,0.30698353829866787,platform_constant,True,H&E,0.4999913105374158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1172/jci.insight.162835,GSM6896313,,,val,hesrt,samples/GSE205707/GSM6896313,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.9400000000000001, ""life_stage"": 0.97}",,
GSM6896314,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,718,1000,counts,pixel,0.30716517053229786,platform_constant,True,H&E,0.4999971118002034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1172/jci.insight.162835,GSM6896314,,,val,hesrt,samples/GSE205707/GSM6896314,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.96, ""life_stage"": 0.97}",,
GSM6896315,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2005,1000,counts,pixel,0.3077052651812414,platform_constant,True,H&E,0.4999895398119399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1172/jci.insight.162835,GSM6896315,,,val,hesrt,samples/GSE205707/GSM6896315,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM6896316,GSE205707,GSE205707,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2402,1000,counts,pixel,0.3069243482901714,platform_constant,True,H&E,0.49999654606770044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1172/jci.insight.162835,GSM6896316,,,val,hesrt,samples/GSE205707/GSM6896316,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6248646,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2021,17943,counts,pixel,4.252777902405432,platform_constant,True,H&E,4.252777902405432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248646,,,train,hesrt,samples/GSE206245/GSM6248646,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248647,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2614,17943,counts,pixel,4.053282778974647,platform_constant,True,H&E,4.053282778974647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248647,,,train,hesrt,samples/GSE206245/GSM6248647,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248648,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1939,17943,counts,pixel,4.103030398712962,platform_constant,True,H&E,4.103030398712962,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248648,,,train,hesrt,samples/GSE206245/GSM6248648,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248649,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1209,17943,counts,pixel,4.2404042325791655,platform_constant,True,H&E,4.2404042325791655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248649,,,train,hesrt,samples/GSE206245/GSM6248649,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248650,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2602,17943,counts,pixel,4.239141434340923,platform_constant,True,H&E,4.239141434340923,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248650,,,train,hesrt,samples/GSE206245/GSM6248650,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248651,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1309,17943,counts,pixel,4.254545384362471,platform_constant,True,H&E,4.254545384362471,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248651,,,train,hesrt,samples/GSE206245/GSM6248651,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248652,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1272,17943,counts,pixel,4.254238790482051,platform_constant,True,H&E,4.254238790482051,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248652,,,train,hesrt,samples/GSE206245/GSM6248652,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248653,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3668,17943,counts,pixel,4.384673474017531,platform_constant,True,H&E,4.384673474017531,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248653,,,train,hesrt,samples/GSE206245/GSM6248653,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248654,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1556,17943,counts,pixel,4.345706991745568,platform_constant,True,H&E,4.345706991745568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248654,,,train,hesrt,samples/GSE206245/GSM6248654,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248655,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2067,17943,counts,pixel,4.2980130430915064,platform_constant,True,H&E,4.2980130430915064,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248655,,,train,hesrt,samples/GSE206245/GSM6248655,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6248656,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1977,17943,counts,pixel,4.298013043091485,platform_constant,True,H&E,4.298013043091485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248656,,,train,hesrt,samples/GSE206245/GSM6248656,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248657,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1086,17943,counts,pixel,4.308618673066466,platform_constant,True,H&E,4.308618673066466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248657,,,train,hesrt,samples/GSE206245/GSM6248657,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8361988,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,6053,30616,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39231979,,GSM8361988,,,train,sda-all,samples/GSE206245/GSM8361988,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8361990,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1722,30616,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39231979,,GSM8361990,,,train,sda-all,samples/GSE206245/GSM8361990,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8361991,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,airway,uberon_chain,UBERON:0001728,nasopharynx,Nasopharynx,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1788,30616,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39231979,,GSM8361991,,,train,sda-all,samples/GSE206245/GSM8361991,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8361993,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Nasopharynx,tumour tissue,MONDO:0001056;MONDO:0004993,gastric cancer;carcinoma,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3280,33592,counts,pixel,4.448844085519946,platform_constant,True,H&E,4.448844085519946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM8361993,,,train,hesrt,samples/GSE206245/GSM8361993,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 0.85, ""disease_status"": 0.92, ""uberon"": 0.64, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8361995,GSE206245,GSE206245,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Nasopharynx,tumour tissue,MONDO:0001056;MONDO:0005626,gastric cancer;epithelial neoplasm,disease,luna,Nasopharyngeal carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4605,33592,counts,pixel,4.456784047418568,platform_constant,True,H&E,4.456784047418568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM8361995,,,train,hesrt,samples/GSE206245/GSM8361995,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6250307,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,Reference,Reference,not stated,luna,not stated,,female,extracted field,female,GSE206306:20-0034,20-0034,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2438,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250307,,,train,hesrt,samples/GSE206306/GSM6250307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6250308,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,Calcium Oxalate,Calcium Oxalate,not stated,luna,not stated,,female,extracted field,female,GSE206306:KRP428,KRP428,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,817,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250308,,,train,hesrt,samples/GSE206306/GSM6250308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6250309,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,Calcium Oxalate,Calcium Oxalate,not stated,luna,not stated,,female,extracted field,female,GSE206306:KRP449,KRP449,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,939,36601,counts,pixel,0.7575757575757576,platform_constant,True,H&E,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250309,,,train,hesrt,samples/GSE206306/GSM6250309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6250310,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,Calcium Oxalate,Calcium Oxalate,not stated,luna,not stated,,mixed,sample text,,GSE206306:KRP429,KRP429,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1085,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250310,,,train,hesrt,samples/GSE206306/GSM6250310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM7166168,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,Calcium Oxalate,Calcium Oxalate,not stated,luna,not stated,,mixed,sample text,,GSE206306:KRP446/KRP462/KRP475,KRP446/KRP462/KRP475,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,656,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM7166168,,,train,hesrt,samples/GSE206306/GSM7166168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7166169,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,Calcium Oxalate,Calcium Oxalate,not stated,luna,not stated,,female,extracted field,female,GSE206306:F59/F63,F59/F63,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1386,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM7166169,,,train,hesrt,samples/GSE206306/GSM7166169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM7166170,GSE206306,GSE206306,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,Calcium Oxalate,Calcium Oxalate,not stated,luna,not stated,,male,extracted field,male,GSE206306:M50,M50,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2468,36601,counts,pixel,0.7591458644571283,platform_constant,True,H&E,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM7166170,,,train,hesrt,samples/GSE206306/GSM7166170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM6256810,GSE206552,GSE206552,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,CRLM,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,colorectal liver metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3498,36601,counts,pixel,2.900073952828708,platform_constant,True,H&E,2.900073952828708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256810,,,train,hesrt,samples/GSE206552/GSM6256810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6256811,GSE206552,GSE206552,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,CRLM,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,colorectal liver metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3776,36601,counts,pixel,3.224129401095805,platform_constant,True,H&E,3.224129401095805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256811,,,train,hesrt,samples/GSE206552/GSM6256811,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6256812,GSE206552,GSE206552,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,CRLM,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,colorectal liver metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1248,36601,counts,pixel,3.2376195411908806,platform_constant,True,H&E,3.2376195411908806,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256812,,,train,hesrt,samples/GSE206552/GSM6256812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6256813,GSE206552,GSE206552,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,CRLM,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,colorectal liver metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1537,36601,counts,pixel,2.7896417632583534,platform_constant,True,H&E,2.7896417632583534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256813,,,train,hesrt,samples/GSE206552/GSM6256813,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258251,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,,,normal,luna,,Health,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,231,36601,counts,pixel,4.255000078249446,platform_constant,True,H&E,4.255000078249446,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258251,,,train,hesrt,samples/GSE206621/GSM6258251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6258252,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,,,normal,luna,,Health,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,284,36601,counts,pixel,4.186428528099037,platform_constant,True,H&E,4.186428528099037,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258252,,,train,hesrt,samples/GSE206621/GSM6258252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6258253,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,,,normal,luna,,Health,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,295,36601,counts,pixel,4.169999712687019,platform_constant,True,H&E,4.169999712687019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258253,,,train,hesrt,samples/GSE206621/GSM6258253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258254,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,,,normal,luna,,Health,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,319,36601,counts,pixel,4.132857174184212,platform_constant,True,H&E,4.132857174184212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258254,,,train,hesrt,samples/GSE206621/GSM6258254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6258255,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,,,normal,luna,,Health,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1088,36945,counts,pixel,4.095751771582672,platform_constant,True,H&E,4.095751771582672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258255,,,train,hesrt,samples/GSE206621/GSM6258255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258256,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,MONDO:0021166,inflammatory disease,disease,luna,periodontitis,disease,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,415,36945,counts,pixel,4.029768525983423,platform_constant,True,H&E,4.029768525983423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258256,,,train,hesrt,samples/GSE206621/GSM6258256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258257,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,MONDO:0021166,inflammatory disease,disease,luna,periodontitis,disease,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,160,36945,counts,pixel,4.005774593110275,platform_constant,True,H&E,4.005774593110275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258257,,,train,hesrt,samples/GSE206621/GSM6258257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258258,GSE206621,GSE206621,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral mucosa,primary tissue,MONDO:0021166,inflammatory disease,disease,luna,periodontitis,disease,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,501,36945,counts,pixel,4.560032536233237,platform_constant,True,H&E,4.560032536233237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258258,,,train,hesrt,samples/GSE206621/GSM6258258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7898096,GSE206787,GSE206787,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002082,cardiac ventricle,Heart ventricles collected at steady state,primary tissue,,,normal,luna,,steady state (undamaged),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,591,19465,counts,pixel,1.7155305995418189,platform_constant,True,H&E,1.7155305995418189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898096,,,train,hesrt,samples/GSE206787/GSM7898096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.98, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM7898097,GSE206787,GSE206787,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002082,cardiac ventricle,Heart ventricles collected 3 days after MI,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,3 days post-myocardial infarction,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1068,19465,counts,pixel,2.2461502606247286,platform_constant,True,H&E,2.2461502606247286,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898097,,,train,hesrt,samples/GSE206787/GSM7898097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.64}",,
GSM7898098,GSE206787,GSE206787,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002082,cardiac ventricle,Heart ventricles collected 7 days after MI,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,7 days post-myocardial infarction,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1245,19465,counts,pixel,2.6507697959168484,platform_constant,True,H&E,2.6507697959168484,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898098,,,train,hesrt,samples/GSE206787/GSM7898098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM7898099,GSE206787,GSE206787,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002082,cardiac ventricle,Heart ventricles collected 14 days after MI,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,14 days post-myocardial infarction,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,948,19465,counts,pixel,2.0632701528265645,platform_constant,True,H&E,2.0632701528265645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898099,,,train,hesrt,samples/GSE206787/GSM7898099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM7984884,GSE206790,GSE206790,Profibrotic subsets of SPP1+ macrophages and POSTN+ fibroblasts contribute to fibrotic scarring in acne keloidalis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,,,adult,age rule: age in years,adult,40 years old,male,sample text,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1797,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.166454279906858,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38218364,,GSM7984884,,,train,sda-all,samples/GSE206790/GSM7984884,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM6281320,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2276,36601,counts,pixel,4.25531914893617,platform_constant,True,H&E,4.25531914893617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281320,,,train,hesrt,samples/GSE207205/GSM6281320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6281321,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,10 days,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2594,36601,counts,pixel,4.103191478436959,platform_constant,True,H&E,4.103191478436959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281321,,,train,hesrt,samples/GSE207205/GSM6281321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6281322,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,4 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2269,36601,counts,pixel,4.101702198208847,platform_constant,True,H&E,4.101702198208847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281322,,,train,hesrt,samples/GSE207205/GSM6281322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6281323,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,9 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2582,36601,counts,pixel,4.103829801121403,platform_constant,True,H&E,4.103829801121403,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281323,,,train,hesrt,samples/GSE207205/GSM6281323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6281324,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,5.5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2515,36601,counts,pixel,4.118898935904241,platform_constant,True,H&E,4.118898935904241,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281324,,,train,hesrt,samples/GSE207205/GSM6281324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM6281325,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1623,36601,counts,pixel,4.222302330002272,platform_constant,True,H&E,4.222302330002272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281325,,,train,hesrt,samples/GSE207205/GSM6281325,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6281326,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,5.5 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2227,36601,counts,pixel,4.122371413357612,platform_constant,True,H&E,4.122371413357612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281326,,,train,hesrt,samples/GSE207205/GSM6281326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6281327,GSE207205,GSE207205,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,12 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2243,36601,counts,pixel,4.118898935904241,platform_constant,True,H&E,4.118898935904241,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281327,,,train,hesrt,samples/GSE207205/GSM6281327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM6294362,GSE207546,GSE207546,Choroid plexus mast cells drive tumor-associated hydrocephalus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain section,primary tissue,MONDO:0005070;MONDO:0001150,neoplasm;hydrocephalus,disease,luna,,mice injected EO771-VM cells,adult,age rule: age with unit,adult,9-12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3417,25636,counts,um,1.0,verified,True,H&E-like (heuristic),4.980984031467139,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38056463,,GSM6294362,,,train,sda-all,samples/GSE207546/GSM6294362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6294363,GSE207546,GSE207546,Choroid plexus mast cells drive tumor-associated hydrocephalus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain section,primary tissue,MONDO:0005070;MONDO:0001150,neoplasm;hydrocephalus,disease,luna,,mice injected EO771-VM cells,adult,age rule: age with unit,adult,9-12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4156,25636,counts,um,1.0,verified,True,H&E-like (heuristic),5.681393823040841,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38056463,,GSM6294363,,,train,sda-all,samples/GSE207546/GSM6294363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6294364,GSE207546,GSE207546,Choroid plexus mast cells drive tumor-associated hydrocephalus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain section,primary tissue,MONDO:0005070;MONDO:0001150,neoplasm;hydrocephalus,disease,luna,,mice injected EO771-VM cells,adult,age rule: age with unit,adult,9-12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3201,25636,counts,um,1.0,verified,True,H&E-like (heuristic),4.981471801063524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38056463,,GSM6294364,,,train,sda-all,samples/GSE207546/GSM6294364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6320933,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1218,39844,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320933,,,train,sda-all,samples/GSE207843/GSM6320933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320934,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1291,40955,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320934,,,train,sda-all,samples/GSE207843/GSM6320934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320935,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1293,30799,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320935,,,train,sda-all,samples/GSE207843/GSM6320935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320936,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1296,32266,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320936,,,train,sda-all,samples/GSE207843/GSM6320936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320937,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1295,33955,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320937,,,train,sda-all,samples/GSE207843/GSM6320937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320938,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1291,35797,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320938,,,train,sda-all,samples/GSE207843/GSM6320938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320939,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1292,37347,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320939,,,train,sda-all,samples/GSE207843/GSM6320939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320940,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1271,35543,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320940,,,train,sda-all,samples/GSE207843/GSM6320940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320941,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1285,34211,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320941,,,train,sda-all,samples/GSE207843/GSM6320941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320942,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1296,28529,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320942,,,train,sda-all,samples/GSE207843/GSM6320942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320943,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1296,29475,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320943,,,train,sda-all,samples/GSE207843/GSM6320943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320944,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1295,27473,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320944,,,train,sda-all,samples/GSE207843/GSM6320944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320945,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1296,32114,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320945,,,train,sda-all,samples/GSE207843/GSM6320945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320946,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1293,32898,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320946,,,train,sda-all,samples/GSE207843/GSM6320946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6320947,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002037,cerebellum,Cerebellum,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,4 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1296,32224,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320947,,,train,sda-all,samples/GSE207843/GSM6320947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320948,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002037,cerebellum,Cerebellum,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,4 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1296,33382,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6320948,,,train,sda-all,samples/GSE207843/GSM6320948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6934374,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1214,21748,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6934374,,,train,sda-all,samples/GSE207843/GSM6934374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6934375,GSE207843,GSE207843,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,wild-type,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1258,23305,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36934108,,GSM6934375,,,train,sda-all,samples/GSE207843/GSM6934375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6339631,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1185,36601,counts,pixel,3.9624329632594413,platform_constant,True,H&E,3.9624329632594413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339631,,,train,hesrt,samples/GSE208253/GSM6339631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339632,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1836,36601,counts,pixel,3.9191809966305695,platform_constant,True,H&E,3.9191809966305695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339632,,,train,hesrt,samples/GSE208253/GSM6339632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339633,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage I,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,969,36601,counts,pixel,4.017586325254635,platform_constant,True,H&E,4.017586325254635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339633,,,train,hesrt,samples/GSE208253/GSM6339633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6339634,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2046,36601,counts,pixel,4.069213646029788,platform_constant,True,H&E,4.069213646029788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339634,,,train,hesrt,samples/GSE208253/GSM6339634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6339635,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage II,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1678,36601,counts,pixel,3.974655371544023,platform_constant,True,H&E,3.974655371544023,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339635,,,train,hesrt,samples/GSE208253/GSM6339635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339636,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage II,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3311,36601,counts,pixel,3.9094500222848416,platform_constant,True,H&E,3.9094500222848416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339636,,,train,hesrt,samples/GSE208253/GSM6339636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339637,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2860,36601,counts,pixel,3.960285912011091,platform_constant,True,H&E,3.960285912011091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339637,,,train,hesrt,samples/GSE208253/GSM6339637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6339638,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2475,36601,counts,pixel,3.935789692366815,platform_constant,True,H&E,3.935789692366815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339638,,,train,hesrt,samples/GSE208253/GSM6339638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6339639,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3591,36601,counts,pixel,3.945305172878076,platform_constant,True,H&E,3.945305172878076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339639,,,train,hesrt,samples/GSE208253/GSM6339639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339640,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2731,36601,counts,pixel,4.02637938825526,platform_constant,True,H&E,4.02637938825526,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339640,,,train,hesrt,samples/GSE208253/GSM6339640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6339641,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage II,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2130,36601,counts,pixel,3.948793040626919,platform_constant,True,H&E,3.948793040626919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339641,,,train,hesrt,samples/GSE208253/GSM6339641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339642,GSE208253,GSE208253,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral squamous cell carcinoma (OSCC),tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,oral squamous cell carcinoma,Stage IVA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1559,36601,counts,pixel,4.014335855359846,platform_constant,True,H&E,4.014335855359846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339642,,,train,hesrt,samples/GSE208253/GSM6339642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6368793,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2961,33538,counts,um,1.0,verified,True,H&E,4.525930943358646,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368793,,,test,sda-all,samples/GSE208747/GSM6368793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368794,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4789,33538,counts,um,1.0,verified,True,H&E,4.034779295797065,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368794,,,test,sda-all,samples/GSE208747/GSM6368794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368795,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3627,33538,counts,um,1.0,verified,True,H&E,4.027825165710968,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368795,,,test,sda-all,samples/GSE208747/GSM6368795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368796,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4729,33538,counts,um,1.0,verified,True,H&E,4.0348852214384845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368796,,,test,sda-all,samples/GSE208747/GSM6368796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368797,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,,,normal,luna,non-demented control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3550,33538,counts,um,1.0,verified,True,H&E,4.5302386352524096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368797,,,test,sda-all,samples/GSE208747/GSM6368797,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6368798,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,,,normal,luna,non-demented control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3067,33538,counts,um,1.0,verified,True,H&E,4.512060788727136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368798,,,test,sda-all,samples/GSE208747/GSM6368798,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6368799,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,,,normal,luna,non-demented control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3225,33538,counts,um,1.0,verified,True,H&E,3.9594031619862844,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368799,,,test,sda-all,samples/GSE208747/GSM6368799,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6368800,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,,,normal,luna,non-demented control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3459,33538,counts,um,1.0,verified,True,H&E,4.2777824720836515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368800,,,test,sda-all,samples/GSE208747/GSM6368800,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6368801,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,,,normal,luna,non-demented control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4831,33538,counts,um,1.0,verified,True,H&E,4.09535203738447,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,39501035,,GSM6368801,,,test,sda-all,samples/GSE208747/GSM6368801,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6368804,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4208,33538,counts,um,1.0,verified,True,H&E,4.031362843937651,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,39501035,,GSM6368804,,,test,sda-all,samples/GSE208747/GSM6368804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368805,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3649,33538,counts,um,1.0,verified,True,H&E,4.032304692785461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368805,,,test,sda-all,samples/GSE208747/GSM6368805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368806,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3657,33538,counts,um,1.0,verified,True,H&E,3.932381323518317,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368806,,,test,sda-all,samples/GSE208747/GSM6368806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368807,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4702,33538,counts,um,1.0,verified,True,H&E,3.9291674786054585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368807,,,test,sda-all,samples/GSE208747/GSM6368807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368808,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4895,33538,counts,um,1.0,verified,True,H&E,3.930000258763079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368808,,,test,sda-all,samples/GSE208747/GSM6368808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368809,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3751,33538,counts,um,1.0,verified,True,H&E,3.9339635109136744,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368809,,,test,sda-all,samples/GSE208747/GSM6368809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368810,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4284,33538,counts,um,1.0,verified,True,H&E,4.513088840688379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368810,,,test,sda-all,samples/GSE208747/GSM6368810,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368811,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4436,33538,counts,um,1.0,verified,True,H&E,4.549125043895784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368811,,,test,sda-all,samples/GSE208747/GSM6368811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368812,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002316,white matter,white matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3797,33538,counts,um,1.0,verified,True,H&E,4.544577536939472,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368812,,,test,sda-all,samples/GSE208747/GSM6368812,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368813,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3596,33538,counts,um,1.0,verified,True,H&E,4.235108241841879,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368813,,,test,sda-all,samples/GSE208747/GSM6368813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6368814,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3068,33538,counts,um,1.0,verified,True,H&E,3.9964738927139516,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368814,,,test,sda-all,samples/GSE208747/GSM6368814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368815,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4549,33538,counts,um,1.0,verified,True,H&E,4.097341705678958,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368815,,,test,sda-all,samples/GSE208747/GSM6368815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368818,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3167,33538,counts,um,1.0,verified,True,H&E,4.091825332237767,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368818,,,test,sda-all,samples/GSE208747/GSM6368818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368819,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4673,33538,counts,um,1.0,verified,True,H&E,4.293364886308768,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368819,,,test,sda-all,samples/GSE208747/GSM6368819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368820,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3566,33538,counts,um,1.0,verified,True,H&E,4.097675497251554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368820,,,test,sda-all,samples/GSE208747/GSM6368820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368821,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4325,33538,counts,um,1.0,verified,True,H&E,4.245251320048181,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368821,,,test,sda-all,samples/GSE208747/GSM6368821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368822,GSE208747,GSE208747,Decoding spatial gene activity changes in multiple sclerosis lesion progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002020,gray matter,grey matter,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4624,33538,counts,um,1.0,verified,True,H&E,4.034032437924282,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368822,,,test,sda-all,samples/GSE208747/GSM6368822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6380080,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,5XFAD,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2380,32285,counts,pixel,4.78676963678303,platform_constant,True,H&E,4.78676963678303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380080,,,train,hesrt,samples/GSE209583/GSM6380080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6380081,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,5XFAD,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2171,32285,counts,pixel,4.762746432183831,platform_constant,True,H&E,4.762746432183831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380081,,,train,hesrt,samples/GSE209583/GSM6380081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380082,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1794,32285,counts,pixel,4.660988782478543,platform_constant,True,H&E,4.660988782478543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380082,,,train,hesrt,samples/GSE209583/GSM6380082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6380083,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2410,32285,counts,pixel,4.6931421399874935,platform_constant,True,H&E,4.6931421399874935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380083,,,train,hesrt,samples/GSE209583/GSM6380083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6380084,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,vehicle,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2484,32285,counts,pixel,5.03959675118028,platform_constant,True,H&E,5.03959675118028,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380084,,,train,hesrt,samples/GSE209583/GSM6380084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6380085,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,vehicle,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2732,32285,counts,pixel,4.691082141053782,platform_constant,True,H&E,4.691082141053782,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380085,,,train,hesrt,samples/GSE209583/GSM6380085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6380086,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,hNSC,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2936,32285,counts,pixel,4.928588375678347,platform_constant,True,H&E,4.928588375678347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380086,,,train,hesrt,samples/GSE209583/GSM6380086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380087,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,hNSC,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2459,32285,counts,pixel,4.683960986500182,platform_constant,True,H&E,4.683960986500182,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380087,,,train,hesrt,samples/GSE209583/GSM6380087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380088,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,hNSC,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1661,32285,counts,pixel,4.695656923966957,platform_constant,True,H&E,4.695656923966957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380088,,,train,hesrt,samples/GSE209583/GSM6380088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380089,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,hNSC,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1854,32285,counts,pixel,4.63290131041097,platform_constant,True,H&E,4.63290131041097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380089,,,train,hesrt,samples/GSE209583/GSM6380089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380090,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,hNSC,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1723,32285,counts,pixel,4.573605609315817,platform_constant,True,H&E,4.573605609315817,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380090,,,train,hesrt,samples/GSE209583/GSM6380090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6380091,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,hNSC,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1513,32285,counts,pixel,4.765027748371623,platform_constant,True,H&E,4.765027748371623,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380091,,,train,hesrt,samples/GSE209583/GSM6380091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380092,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,5XFAD,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2345,32285,counts,pixel,4.756699469020538,platform_constant,True,H&E,4.756699469020538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380092,,,train,hesrt,samples/GSE209583/GSM6380092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380093,GSE209583,GSE209583,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,5XFAD,adult,age rule: age with unit,adult,41 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2287,32285,counts,pixel,4.7483768406641,platform_constant,True,H&E,4.7483768406641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380093,,,train,hesrt,samples/GSE209583/GSM6380093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6415705,GSE210041+GSE210042,GSE210041,Mesenchymal-like tumor cells and myofibroblastic cancer-associated fibroblasts are associated with progression and immunotherapy response of clear-cell renal cell carcinoma [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear-cell renal cell carcinoma,Tumour,not stated,luna,not stated,,unknown,not stated,,GSE210041:Patient 1,Patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3199,17943,counts,pixel,4.660426103030553,platform_constant,True,H&E,4.660426103030553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37335139,,GSM6415705,,,train,hesrt,samples/GSE210041/GSM6415705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6415706,GSE210041+GSE210042,GSE210041,Mesenchymal-like tumor cells and myofibroblastic cancer-associated fibroblasts are associated with progression and immunotherapy response of clear-cell renal cell carcinoma [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear-cell renal cell carcinoma,Tumour,not stated,luna,not stated,,unknown,not stated,,GSE210041:Patient 7,Patient 7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3880,17943,counts,pixel,4.6590739100801875,platform_constant,True,H&E,4.6590739100801875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37335139,,GSM6415706,,,train,hesrt,samples/GSE210041/GSM6415706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6429503,GSE210380,GSE210380,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0001817,lacrimal gland,Lacrimal Gland,primary tissue,,,normal,luna,,control,adult,age rule: age with unit,adult,4 months,male,extracted field,male,GSE210380:BALB/cJ,BALB/cJ,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1135,32285,counts,pixel,0.7518796992481203,platform_constant,True,H&E,0.7518796992481203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429503,,,train,hesrt,samples/GSE210380/GSM6429503,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6429504,GSE210380,GSE210380,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0001817,lacrimal gland,Lacrimal Gland,primary tissue,,,normal,luna,,control,adult,age rule: age with unit,adult,4 months,male,extracted field,male,GSE210380:BALB/cJ,BALB/cJ,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1106,32285,counts,pixel,0.7541855601681494,platform_constant,True,H&E,0.7541855601681494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429504,,,train,hesrt,samples/GSE210380/GSM6429504,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6429505,GSE210380,GSE210380,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,uberon_chain,UBERON:0001817,lacrimal gland,Lacrimal Gland,primary tissue,,,disease,luna,,disease,adult,age rule: age with unit,adult,4 months,male,extracted field,male,GSE210380:NOD.B10Sn-H2b/J,NOD.B10Sn-H2b/J,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1530,32285,counts,pixel,0.7541855601681494,platform_constant,True,H&E,0.7541855601681494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429505,,,train,hesrt,samples/GSE210380/GSM6429505,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6429506,GSE210380,GSE210380,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,uberon_chain,UBERON:0001817,lacrimal gland,Lacrimal Gland,primary tissue,,,disease,luna,,disease,adult,age rule: age with unit,adult,4 months,male,extracted field,male,GSE210380:NOD.B10Sn-H2b/J,NOD.B10Sn-H2b/J,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1505,32285,counts,pixel,0.7541855601681494,platform_constant,True,H&E,0.7541855601681494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429506,,,train,hesrt,samples/GSE210380/GSM6429506,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433585,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1289,36601,counts,pixel,0.44052863436123346,platform_constant,True,H&E,0.49998633717128693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433585,,,train,hesrt,samples/GSE210616/GSM6433585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433586,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1376,36601,counts,pixel,0.44052863436123346,platform_constant,True,H&E,0.49998633717128693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433586,,,train,hesrt,samples/GSE210616/GSM6433586,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433587,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1654,36601,counts,pixel,0.44051153707665197,platform_constant,True,H&E,0.5000022365065548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433587,,,train,hesrt,samples/GSE210616/GSM6433587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433588,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1178,36601,counts,pixel,0.44051153707665197,platform_constant,True,H&E,0.5000022365065548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433588,,,train,hesrt,samples/GSE210616/GSM6433588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433589,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2117,36601,counts,pixel,0.44051153707665197,platform_constant,True,H&E,0.5000022365065548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433589,,,train,hesrt,samples/GSE210616/GSM6433589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433590,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1532,36601,counts,pixel,0.44052863436123346,platform_constant,True,H&E,0.5000080575573295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433590,,,train,hesrt,samples/GSE210616/GSM6433590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433591,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,772,36601,counts,pixel,0.4065040650406504,platform_constant,True,H&E,0.4999878313627299,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433591,,,train,hesrt,samples/GSE210616/GSM6433591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433592,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1325,36601,counts,pixel,0.4065040650406504,platform_constant,True,H&E,0.5000023869880508,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433592,,,train,hesrt,samples/GSE210616/GSM6433592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433593,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1542,36601,counts,pixel,0.4065040650406504,platform_constant,True,H&E,0.5000078775231349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433593,,,train,hesrt,samples/GSE210616/GSM6433593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433594,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1391,36601,counts,pixel,0.4065040650406504,platform_constant,True,H&E,0.5000062032548955,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433594,,,train,hesrt,samples/GSE210616/GSM6433594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433595,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1264,36601,counts,pixel,0.40650070643278524,platform_constant,True,H&E,0.5000042110552312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433595,,,train,hesrt,samples/GSE210616/GSM6433595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433596,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1167,36601,counts,pixel,0.40650070643278524,platform_constant,True,H&E,0.49999300690312776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433596,,,train,hesrt,samples/GSE210616/GSM6433596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433597,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1109,36601,counts,pixel,0.32361781685513175,platform_constant,True,H&E,0.49999759287010903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433597,,,train,hesrt,samples/GSE210616/GSM6433597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433598,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1058,36601,counts,pixel,0.3246736134215414,platform_constant,True,H&E,0.49998901830379017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433598,,,train,hesrt,samples/GSE210616/GSM6433598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433599,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1949,36601,counts,pixel,0.32573117099222815,platform_constant,True,H&E,0.49998427639879284,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433599,,,train,hesrt,samples/GSE210616/GSM6433599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433600,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,754,36601,counts,pixel,0.32361781685513175,platform_constant,True,H&E,0.4999947298999704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433600,,,train,hesrt,samples/GSE210616/GSM6433600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433601,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1593,36601,counts,pixel,0.3225806451612903,platform_constant,True,H&E,0.5000041795885612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433601,,,train,hesrt,samples/GSE210616/GSM6433601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433602,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1554,36601,counts,pixel,0.3236229007757908,platform_constant,True,H&E,0.5000040745043717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433602,,,train,hesrt,samples/GSE210616/GSM6433602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433603,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1127,36601,counts,pixel,0.32257896681515275,platform_constant,True,H&E,0.49999429545022933,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433603,,,train,hesrt,samples/GSE210616/GSM6433603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433604,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1111,36601,counts,pixel,0.32257896681515275,platform_constant,True,H&E,0.5000150280961682,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433604,,,train,hesrt,samples/GSE210616/GSM6433604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433605,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,558,36601,counts,pixel,0.3236229007757908,platform_constant,True,H&E,0.5000131850289173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433605,,,train,hesrt,samples/GSE210616/GSM6433605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433606,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,850,36601,counts,pixel,0.3278670902111847,platform_constant,True,H&E,0.4999967851492875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433606,,,train,hesrt,samples/GSE210616/GSM6433606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433607,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2088,36601,counts,pixel,0.32361781685513175,platform_constant,True,H&E,0.4999922437088907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433607,,,train,hesrt,samples/GSE210616/GSM6433607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433608,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3116,36601,counts,pixel,0.3236229007757908,platform_constant,True,H&E,0.4999886016326645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433608,,,train,hesrt,samples/GSE210616/GSM6433608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433609,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1518,36601,counts,pixel,0.32361781685513175,platform_constant,True,H&E,0.5000022285511696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433609,,,train,hesrt,samples/GSE210616/GSM6433609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433610,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1511,36601,counts,pixel,0.3236229007757908,platform_constant,True,H&E,0.5000021819866903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433610,,,train,hesrt,samples/GSE210616/GSM6433610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433611,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1359,36601,counts,pixel,0.3246684798225369,platform_constant,True,H&E,0.5000002728909335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433611,,,train,hesrt,samples/GSE210616/GSM6433611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433612,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,844,36601,counts,pixel,0.32257896681515275,platform_constant,True,H&E,0.4999890459232274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433612,,,train,hesrt,samples/GSE210616/GSM6433612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433613,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1868,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000113193024291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433613,,,train,hesrt,samples/GSE210616/GSM6433613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433614,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1199,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000078031825909,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433614,,,train,hesrt,samples/GSE210616/GSM6433614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433615,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1048,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000134628687788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433615,,,train,hesrt,samples/GSE210616/GSM6433615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433616,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,921,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433616,,,train,hesrt,samples/GSE210616/GSM6433616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433617,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,554,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000053653999581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433617,,,train,hesrt,samples/GSE210616/GSM6433617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433618,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2207,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.49998903698618435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433618,,,train,hesrt,samples/GSE210616/GSM6433618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433619,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2196,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.500014239316795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433619,,,train,hesrt,samples/GSE210616/GSM6433619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433620,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,926,36601,counts,pixel,0.4328963766201112,platform_constant,True,H&E,0.5000144166705731,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433620,,,train,hesrt,samples/GSE210616/GSM6433620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433621,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,821,36601,counts,pixel,0.4328963766201112,platform_constant,True,H&E,0.4999908808805768,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433621,,,train,hesrt,samples/GSE210616/GSM6433621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433622,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1298,36601,counts,pixel,0.4328963766201112,platform_constant,True,H&E,0.4999916354150918,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433622,,,train,hesrt,samples/GSE210616/GSM6433622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433623,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,901,36601,counts,pixel,0.4328963766201112,platform_constant,True,H&E,0.49998592296741706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433623,,,train,hesrt,samples/GSE210616/GSM6433623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433624,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1266,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000136684280129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433624,,,train,hesrt,samples/GSE210616/GSM6433624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6433625,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,635,36601,counts,pixel,0.4328963766201112,platform_constant,True,H&E,0.5000107334980887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433625,,,train,hesrt,samples/GSE210616/GSM6433625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433626,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,897,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000101643385312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433626,,,train,hesrt,samples/GSE210616/GSM6433626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433627,GSE210616,GSE210616,Spatial transcriptomics of triple negative breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,TNBC tumor tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1124,36601,counts,pixel,0.4329004329004329,platform_constant,True,H&E,0.5000097805103019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433627,,,train,hesrt,samples/GSE210616/GSM6433627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6433926,GSE210637,GSE210637,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,disease,luna,,Het G610C,juvenile,age rule: age with unit,juvenile,4.5 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,818,32285,counts,pixel,2.3255813953488373,platform_constant,True,H&E,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433926,,,val,hesrt,samples/GSE210637/GSM6433926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433927,GSE210637,GSE210637,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,disease,luna,,Het G610C,juvenile,age rule: age with unit,juvenile,4.5 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2814,32285,counts,pixel,2.3255813953488373,platform_constant,True,H&E,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433927,,,val,hesrt,samples/GSE210637/GSM6433927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM6433928,GSE210637,GSE210637,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,perturbation,luna,,WT,juvenile,age rule: age with unit,juvenile,4.5 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2213,32285,counts,pixel,2.3255813953488373,platform_constant,True,H&E,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433928,,,val,hesrt,samples/GSE210637/GSM6433928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433929,GSE210637,GSE210637,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,perturbation,luna,,WT,juvenile,age rule: age with unit,juvenile,4.5 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2258,32285,counts,pixel,2.3255813953488373,platform_constant,True,H&E,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433929,,,val,hesrt,samples/GSE210637/GSM6433929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433930,GSE210637,GSE210637,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,disease,luna,,Het G610C,juvenile,age rule: age with unit,juvenile,4.5 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2689,32285,counts,pixel,2.3255813953488373,platform_constant,True,H&E,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433930,,,val,hesrt,samples/GSE210637/GSM6433930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.62, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433931,GSE210637,GSE210637,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,perturbation,luna,,WT,juvenile,age rule: age with unit,juvenile,4.5 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2211,32285,counts,pixel,2.3255813953488373,platform_constant,True,H&E,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433931,,,val,hesrt,samples/GSE210637/GSM6433931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6436178,GSE210738,GSE210738,Spatial transcriptomics revealing host-microbe interactions,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is a metagenome label; host species given,"Mus musculus
mouse gut metagenome",,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,535,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6436178,,,test,sda-all,samples/GSE210738/GSM6436178,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6436179,GSE210738,GSE210738,Spatial transcriptomics revealing host-microbe interactions,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is a metagenome label; host species given,"Mus musculus
mouse gut metagenome",,colon,luna,UBERON:0000059,large intestine,large intestine,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,641,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6436179,,,test,sda-all,samples/GSE210738/GSM6436179,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6436954,GSE210773,GSE210773,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,Oryctolagus cuniculus,9986,rabbit,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,skeletal muscle,luna,UBERON:0002383,supraspinatus muscle,M. supraspinatus,primary tissue,,,perturbation,luna,,"Harvested and snapfrozen at 2w after tenotomy; muscle, 2 weeks tenotomy, stored 6 years",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,854,21139,counts,pixel,0.49958658728879574,platform_constant,True,H&E,0.49958658728879574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436954,,,train,hesrt,samples/GSE210773/GSM6436954,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6436955,GSE210773,GSE210773,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,Oryctolagus cuniculus,9986,rabbit,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,skeletal muscle,luna,UBERON:0002383,supraspinatus muscle,M. supraspinatus,primary tissue,,,disease,luna,,"Harvested and snapfrozen at 16w after tenotomy; muscle, 16 weeks tenotomy, stored 6 years",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1726,21139,counts,pixel,0.5000970529380039,platform_constant,True,H&E,0.5000970529380039,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436955,,,train,hesrt,samples/GSE210773/GSM6436955,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.59}",disease_status;life_stage,low_confidence_annotation
GSM6436956,GSE210773,GSE210773,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,Oryctolagus cuniculus,9986,rabbit,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,skeletal muscle,luna,UBERON:0002383,supraspinatus muscle,M. supraspinatus,primary tissue,,,normal,luna,,"Harvested and snapfrozen; muscle, healthy, stored 6 years",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2440,21139,counts,pixel,0.4988068339141743,platform_constant,True,H&E,0.4999848736710878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436956,,,train,hesrt,samples/GSE210773/GSM6436956,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6436957,GSE210773,GSE210773,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,Oryctolagus cuniculus,9986,rabbit,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,skeletal muscle,luna,UBERON:0002383,supraspinatus muscle,M. supraspinatus,primary tissue,,,normal,luna,,"Harvested and snapfrozen; muscle, healthy, fresh",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1950,21139,counts,pixel,0.4995049361864149,platform_constant,True,H&E,0.4995049361864149,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436957,,,train,hesrt,samples/GSE210773/GSM6436957,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7431715,GSE211785,GSE211785,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,adult kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,DKD,,aged,age rule: bare number read as years,aged,79,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2970,12511,counts,pixel,0.7549817435426265,platform_constant,True,H&E,0.7549817435426265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431715,,,train,hesrt,samples/GSE211785/GSM7431715,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7431716,GSE211785,GSE211785,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,adult kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,DKD,,adult,age rule: bare number read as years,adult,33,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2960,12511,counts,pixel,0.7519003849398638,platform_constant,True,H&E,0.7519003849398638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431716,,,train,hesrt,samples/GSE211785/GSM7431716,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7431719,GSE211785,GSE211785,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,adult kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,CKD,,aged,age rule: bare number read as years,aged,66,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3028,12511,counts,pixel,0.7525704393903985,platform_constant,True,H&E,0.7525704393903985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431719,,,train,hesrt,samples/GSE211785/GSM7431719,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM7431720,GSE211785,GSE211785,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,adult kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,DKD,,aged,age rule: bare number read as years,aged,74,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3903,12511,counts,pixel,0.752301604154569,platform_constant,True,H&E,0.752301604154569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431720,,,train,hesrt,samples/GSE211785/GSM7431720,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6505118,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1428,25399,counts,pixel,4.428146224676288,platform_constant,True,H&E,4.428146224676288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505118,,,val,hesrt,samples/GSE211895/GSM6505118,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505119,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1375,25399,counts,pixel,4.429283801020672,platform_constant,True,H&E,4.429283801020672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505119,,,val,hesrt,samples/GSE211895/GSM6505119,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505120,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1453,25399,counts,pixel,4.427719336245308,platform_constant,True,H&E,4.427719336245308,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505120,,,val,hesrt,samples/GSE211895/GSM6505120,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505121,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1416,25399,counts,pixel,4.428359217230713,platform_constant,True,H&E,4.428359217230713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505121,,,val,hesrt,samples/GSE211895/GSM6505121,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505122,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1393,25399,counts,pixel,4.5372638662565965,platform_constant,True,H&E,4.5372638662565965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505122,,,val,hesrt,samples/GSE211895/GSM6505122,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505123,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1138,25399,counts,pixel,4.317708326371092,platform_constant,True,H&E,4.317708326371092,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505123,,,val,hesrt,samples/GSE211895/GSM6505123,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505124,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1150,25399,counts,pixel,4.5444067967785955,platform_constant,True,H&E,4.5444067967785955,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505124,,,val,hesrt,samples/GSE211895/GSM6505124,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505125,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1302,25399,counts,pixel,4.319283506064885,platform_constant,True,H&E,4.319283506064885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505125,,,val,hesrt,samples/GSE211895/GSM6505125,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6505126,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1286,25399,counts,pixel,4.538143240260036,platform_constant,True,H&E,4.538143240260036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505126,,,val,hesrt,samples/GSE211895/GSM6505126,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6505127,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1372,25399,counts,pixel,4.535505953053912,platform_constant,True,H&E,4.535505953053912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505127,,,val,hesrt,samples/GSE211895/GSM6505127,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505128,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1124,25399,counts,pixel,4.543527623963291,platform_constant,True,H&E,4.543527623963291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505128,,,val,hesrt,samples/GSE211895/GSM6505128,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505129,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1276,25399,counts,pixel,4.338444530757783,platform_constant,True,H&E,4.338444530757783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505129,,,val,hesrt,samples/GSE211895/GSM6505129,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505130,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1345,25399,counts,pixel,4.337778048455116,platform_constant,True,H&E,4.337778048455116,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505130,,,val,hesrt,samples/GSE211895/GSM6505130,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505131,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1299,25399,counts,pixel,4.336888736403853,platform_constant,True,H&E,4.336888736403853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505131,,,val,hesrt,samples/GSE211895/GSM6505131,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505132,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1388,25399,counts,pixel,4.339333210031179,platform_constant,True,H&E,4.339333210031179,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505132,,,val,hesrt,samples/GSE211895/GSM6505132,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505133,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2204,18035,counts,pixel,4.263711262769721,platform_constant,True,H&E,4.263711262769721,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,SS-GSM6505133,same_section_cross_series,GSM8641043,val,hesrt,samples/GSE211895/GSM6505133,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6505134,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3232,18035,counts,pixel,4.54475740500232,platform_constant,True,H&E,4.54475740500232,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,SS-GSM6505134,same_section_cross_series,GSM8641039,val,hesrt,samples/GSE211895/GSM6505134,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6505135,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic cancer,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2261,18035,counts,pixel,4.5357587679807425,platform_constant,True,H&E,4.5357587679807425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,SS-GSM6505135,same_section_cross_series,GSM8641038,val,hesrt,samples/GSE211895/GSM6505135,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6505136,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,B16F10 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1469,32285,counts,pixel,4.428835238002819,platform_constant,True,H&E,4.428835238002819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505136,,,val,hesrt,samples/GSE211895/GSM6505136,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505137,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,B16F10 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2421,32285,counts,pixel,4.54839563732969,platform_constant,True,H&E,4.54839563732969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505137,,,val,hesrt,samples/GSE211895/GSM6505137,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505138,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,B16F10 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2188,32285,counts,pixel,4.4278615772984775,platform_constant,True,H&E,4.4278615772984775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505138,,,val,hesrt,samples/GSE211895/GSM6505138,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM6505139,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,B16F10 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2897,32285,counts,pixel,4.427435019361736,platform_constant,True,H&E,4.427435019361736,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505139,,,val,hesrt,samples/GSE211895/GSM6505139,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505140,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,B16F10 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3090,32285,counts,pixel,4.428643928596248,platform_constant,True,H&E,4.428643928596248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505140,,,val,hesrt,samples/GSE211895/GSM6505140,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.8, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505141,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,B16F10 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3444,32285,counts,pixel,4.427576966513371,platform_constant,True,H&E,4.427576966513371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505141,,,val,hesrt,samples/GSE211895/GSM6505141,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505142,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1378,32285,counts,pixel,4.5359784842430875,platform_constant,True,H&E,4.5359784842430875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505142,,,val,hesrt,samples/GSE211895/GSM6505142,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM6505143,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1372,32285,counts,pixel,4.4278089244802725,platform_constant,True,H&E,4.4278089244802725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505143,,,val,hesrt,samples/GSE211895/GSM6505143,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505144,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1982,32285,counts,pixel,4.426813059493336,platform_constant,True,H&E,4.426813059493336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505144,,,val,hesrt,samples/GSE211895/GSM6505144,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505145,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1909,32285,counts,pixel,4.426914931840297,platform_constant,True,H&E,4.426914931840297,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505145,,,val,hesrt,samples/GSE211895/GSM6505145,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505146,GSE211895,GSE211895,Assessment of Spatial Genomics for Oncology Discovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 syngeneic tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3600,32285,counts,pixel,4.427554986653368,platform_constant,True,H&E,4.427554986653368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505146,,,val,hesrt,samples/GSE211895/GSM6505146,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6506110,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2940,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.0517360674271305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506110,,,train,sda-all,samples/GSE211956/GSM6506110,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6506111,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1935,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.2402864810127,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506111,,,train,sda-all,samples/GSE211956/GSM6506111,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM6506112,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1504,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.367002118850552,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506112,,,train,sda-all,samples/GSE211956/GSM6506112,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6506113,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3007,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.288795909630906,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506113,,,train,sda-all,samples/GSE211956/GSM6506113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM6506114,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2124,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.230099198708936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506114,,,train,sda-all,samples/GSE211956/GSM6506114,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM6506115,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1801,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.119973387730536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506115,,,train,sda-all,samples/GSE211956/GSM6506115,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM6506116,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3632,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.088968779662904,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506116,,,train,sda-all,samples/GSE211956/GSM6506116,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6506117,GSE211956,GSE211956,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian tumour,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3180,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.110960674579076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506117,,,train,sda-all,samples/GSE211956/GSM6506117,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6523976,GSE212323+GSE213391,GSE212323,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,ApoE3 Middle_age,adult,luna,adult,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2773,68886,counts,pixel,3.8555235745592076,platform_constant,True,H&E,3.8555235745592076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523976,,,train,hesrt,samples/GSE212323/GSM6523976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.42}",disease_status;life_stage,low_confidence_annotation
GSM6523977,GSE212323+GSE213391,GSE212323,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,ApoE4 Middle_age,adult,luna,adult,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2660,68886,counts,pixel,3.8586967613622436,platform_constant,True,H&E,3.8586967613622436,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523977,,,train,hesrt,samples/GSE212323/GSM6523977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.12, ""uberon"": 0.98, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM6523978,GSE212323+GSE213391,GSE212323,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,ApoE3 Young_age,juvenile,luna,juvenile,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2670,68886,counts,pixel,3.9008621243577593,platform_constant,True,H&E,3.9008621243577593,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523978,,,train,hesrt,samples/GSE212323/GSM6523978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6523979,GSE212323+GSE213391,GSE212323,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,ApoE4 Young_age,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2367,68886,counts,pixel,3.8795259882796556,platform_constant,True,H&E,3.8795259882796556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523979,,,train,hesrt,samples/GSE212323/GSM6523979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 0.72}",disease_status,low_confidence_annotation
GSM6523980,GSE212323+GSE213391,GSE212323,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,ApoE3 Old_aged,aged,luna,aged,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2366,68886,counts,pixel,3.8562499891735773,platform_constant,True,H&E,3.8562499891735773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523980,,,train,hesrt,samples/GSE212323/GSM6523980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6523981,GSE212323+GSE213391,GSE212323,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,ApoE4 Old_aged,aged,luna,aged,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1688,68886,counts,pixel,3.8467674233121714,platform_constant,True,H&E,3.8467674233121714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523981,,,train,hesrt,samples/GSE212323/GSM6523981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.28, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6534007,GSE212526,GSE212526,Spatial transcriptomics analysis of soft tissue sarcomas.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Undifferentiated pleomorphic sarcoma,tumour tissue,MONDO:0002142,undifferentiated pleomorphic sarcoma,disease,luna,Undifferentiated pleomorphic sarcoma,Tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1648,36601,counts,pixel,0.7633587786259542,platform_constant,True,H&E,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534007,,,train,hesrt,samples/GSE212526/GSM6534007,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6534008,GSE212526,GSE212526,Spatial transcriptomics analysis of soft tissue sarcomas.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Leiomyosarcoma,tumour tissue,MONDO:0005058,leiomyosarcoma,disease,luna,Leiomyosarcoma,Tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2103,36601,counts,pixel,0.7633587786259542,platform_constant,True,H&E,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534008,,,train,hesrt,samples/GSE212526/GSM6534008,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6534009,GSE212526,GSE212526,Spatial transcriptomics analysis of soft tissue sarcomas.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Undifferentiated pleomorphic sarcoma,tumour tissue,MONDO:0002142,undifferentiated pleomorphic sarcoma,disease,luna,Undifferentiated pleomorphic sarcoma,Tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2179,36601,counts,pixel,0.7633587786259542,platform_constant,True,H&E,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534009,,,train,hesrt,samples/GSE212526/GSM6534009,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6534010,GSE212526,GSE212526,Spatial transcriptomics analysis of soft tissue sarcomas.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Undifferentiated pleomorphic sarcoma,tumour tissue,MONDO:0002142,undifferentiated pleomorphic sarcoma,disease,luna,Undifferentiated pleomorphic sarcoma,Tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1446,36601,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534010,,,train,hesrt,samples/GSE212526/GSM6534010,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6543813,GSE212706,GSE212706,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0021100;MONDO:0004992,breast neoplasm;cancer,disease,luna,breast tumor,early stage breast tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1671,32285,counts,pixel,4.368575043984842,platform_constant,True,H&E,4.368575043984842,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543813,,,train,hesrt,samples/GSE212706/GSM6543813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6543814,GSE212706,GSE212706,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0021100;MONDO:0004992,breast neoplasm;cancer,disease,luna,breast tumor,early stage breast tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,617,32285,counts,pixel,4.807493678731039,platform_constant,True,H&E,4.807493678731039,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543814,,,train,hesrt,samples/GSE212706/GSM6543814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6543815,GSE212706,GSE212706,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0021100;MONDO:0004992,breast neoplasm;cancer,disease,luna,breast tumor,middle stage breast tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1550,32285,counts,pixel,4.370864564069766,platform_constant,True,H&E,4.370864564069766,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543815,,,train,hesrt,samples/GSE212706/GSM6543815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6543816,GSE212706,GSE212706,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0021100;MONDO:0004992,breast neoplasm;cancer,disease,luna,breast tumor,late stage breast tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1716,32285,counts,pixel,4.809020154111703,platform_constant,True,H&E,4.809020154111703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543816,,,train,hesrt,samples/GSE212706/GSM6543816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6543817,GSE212706,GSE212706,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0021100;MONDO:0004992,breast neoplasm;cancer,disease,luna,breast tumor,late stage breast tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1640,32285,counts,pixel,4.806348247466123,platform_constant,True,H&E,4.806348247466123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543817,,,train,hesrt,samples/GSE212706/GSM6543817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6543818,GSE212706,GSE212706,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,normal breast tissue,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,480,32285,counts,pixel,4.369338468746215,platform_constant,True,H&E,4.369338468746215,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543818,,,train,hesrt,samples/GSE212706/GSM6543818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6560897,GSE212903,GSE212903,Spatial transcriptomics of the mouse brain across three age groups,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,6 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2573,32285,counts,pixel,1.1111111111111112,platform_constant,True,H&E,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560897,,,train,hesrt,samples/GSE212903/GSM6560897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6560898,GSE212903,GSE212903,Spatial transcriptomics of the mouse brain across three age groups,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2735,32285,counts,pixel,1.1166390612088835,platform_constant,True,H&E,1.1166390612088835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560898,,,train,hesrt,samples/GSE212903/GSM6560898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6560899,GSE212903,GSE212903,Spatial transcriptomics of the mouse brain across three age groups,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,aged,age rule: age with unit,aged,21 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2973,32285,counts,pixel,1.1111111111111112,platform_constant,True,H&E,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560899,,,train,hesrt,samples/GSE212903/GSM6560899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6560900,GSE212903,GSE212903,Spatial transcriptomics of the mouse brain across three age groups,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,6 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2804,32285,counts,pixel,1.1166390612088835,platform_constant,True,H&E,1.1166390612088835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560900,,,train,hesrt,samples/GSE212903/GSM6560900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6560901,GSE212903,GSE212903,Spatial transcriptomics of the mouse brain across three age groups,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2801,32285,counts,pixel,1.1111111111111112,platform_constant,True,H&E,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560901,,,train,hesrt,samples/GSE212903/GSM6560901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6560902,GSE212903,GSE212903,Spatial transcriptomics of the mouse brain across three age groups,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,aged,age rule: age with unit,aged,21 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2857,32285,counts,pixel,1.1111111111111112,platform_constant,True,H&E,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560902,,,train,hesrt,samples/GSE212903/GSM6560902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6690475,GSE213216,GSE213216,A single-cell transcriptomic analysis of endometriosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Endometriosis,primary tissue,MONDO:0005133,endometriosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1388,36601,counts,um,1.0,verified,True,H&E,4.015091800917568,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36624343;38370978,,GSM6690475,,,train,sda-all,samples/GSE213216/GSM6690475,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6690476,GSE213216,GSE213216,A single-cell transcriptomic analysis of endometriosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Endometriosis,primary tissue,MONDO:0005133,endometriosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1960,36601,counts,um,1.0,verified,True,H&E,4.086742145180486,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36624343;38370978,,GSM6690476,,,train,sda-all,samples/GSE213216/GSM6690476,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM6578058,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1303,19923,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578058,,,train,sda-all,samples/GSE213264/GSM6578058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578059,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2037,19468,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578059,,,train,sda-all,samples/GSE213264/GSM6578059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6578060,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,902,20444,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578060,,,train,sda-all,samples/GSE213264/GSM6578060,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6578061,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2419,23750,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578061,,,train,sda-all,samples/GSE213264/GSM6578061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578062,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2492,28417,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578062,,,train,sda-all,samples/GSE213264/GSM6578062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6578063,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2494,20236,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578063,,,train,sda-all,samples/GSE213264/GSM6578063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578064,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,28278,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578064,,,train,sda-all,samples/GSE213264/GSM6578064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6578065,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1691,15486,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578065,,,train,sda-all,samples/GSE213264/GSM6578065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6578066,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,mondo_predicate,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1710,23899,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578066,,,train,sda-all,samples/GSE213264/GSM6578066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.24, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM6578067,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1303,199,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578067,,,train,sda-all,samples/GSE213264/GSM6578067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578068,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2037,199,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578068,,,train,sda-all,samples/GSE213264/GSM6578068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578069,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,902,199,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578069,,,train,sda-all,samples/GSE213264/GSM6578069,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM6578070,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2419,199,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578070,,,train,sda-all,samples/GSE213264/GSM6578070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578071,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2492,283,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578071,,,train,sda-all,samples/GSE213264/GSM6578071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM6578072,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2494,283,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578072,,,train,sda-all,samples/GSE213264/GSM6578072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578073,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,283,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578073,,,train,sda-all,samples/GSE213264/GSM6578073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578074,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1691,283,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578074,,,train,sda-all,samples/GSE213264/GSM6578074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6578075,GSE213264,GSE213264,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1710,230,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578075,,,train,sda-all,samples/GSE213264/GSM6578075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9349972,GSE213286,GSE213286,Craters on the melanoma surface serve as hubs for CD8+ T cells,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,26210,22366,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41109214,,GSM9349972,,,train,sda-all,samples/GSE213286/GSM9349972,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 0.97}",,
GSM6578640,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 10,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1264,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578640,,,train,sda-all,samples/GSE213306/GSM6578640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6578641,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 13,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1113,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578641,,,train,sda-all,samples/GSE213306/GSM6578641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6578642,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 15,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,821,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578642,,,train,sda-all,samples/GSE213306/GSM6578642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578643,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 17,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2392,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578643,,,train,sda-all,samples/GSE213306/GSM6578643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578644,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 20,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1659,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578644,,,train,sda-all,samples/GSE213306/GSM6578644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578645,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 21,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1244,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578645,,,train,sda-all,samples/GSE213306/GSM6578645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578646,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 22,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2424,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578646,,,train,sda-all,samples/GSE213306/GSM6578646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578647,GSE213306,GSE213306,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,Brain (cortex),primary tissue,,,normal,luna,,"healthy, no known abnormality",fetal,age rule: post-conception / gestational weeks,fetal,Gestational week 24,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3255,36601,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,41509247,,GSM6578647,,,train,sda-all,samples/GSE213306/GSM6578647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6585445,GSE213388,GSE213388,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1325,31053,counts,pixel,4.792450953722311,platform_constant,True,H&E,4.792450953722311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585445,,,val,hesrt,samples/GSE213388/GSM6585445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6585446,GSE213388,GSE213388,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1126,31053,counts,pixel,4.794807186357743,platform_constant,True,H&E,4.794807186357743,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585446,,,val,hesrt,samples/GSE213388/GSM6585446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6585447,GSE213388,GSE213388,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2484,31053,counts,pixel,4.358304559939988,platform_constant,True,H&E,4.358304559939988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585447,,,val,hesrt,samples/GSE213388/GSM6585447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6585448,GSE213388,GSE213388,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1719,31053,counts,pixel,4.35880313821056,platform_constant,True,H&E,4.35880313821056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585448,,,val,hesrt,samples/GSE213388/GSM6585448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6591749,GSE213666,GSE213666,Multi-omics profiling visualizes dynamics of cardiac development and functions,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,wild type,embryonic,age rule: embryonic day,embryonic,10.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,332,32285,counts,pixel,0.5780250255571965,platform_constant,True,H&E,0.5780250255571965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36577384,,GSM6591749,,,train,hesrt,samples/GSE213666/GSM6591749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592048,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1689,36601,counts,pixel,3.9727065412012545,platform_constant,True,H&E,3.9727065412012545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592048,,,train,hesrt,samples/GSE213688/GSM6592048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592049,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1848,36601,counts,pixel,3.9727065412012545,platform_constant,True,H&E,3.9727065412012545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592049,,,train,hesrt,samples/GSE213688/GSM6592049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592050,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Unstable,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2417,36601,counts,pixel,3.9170248727954173,platform_constant,True,H&E,3.9170248727954173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592050,,,train,hesrt,samples/GSE213688/GSM6592050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6592051,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Unstable,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1564,36601,counts,pixel,5.141044033787043,platform_constant,True,H&E,5.141044033787043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592051,,,train,hesrt,samples/GSE213688/GSM6592051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592052,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Unstable,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2104,36601,counts,pixel,4.044621436162119,platform_constant,True,H&E,4.044621436162119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592052,,,train,hesrt,samples/GSE213688/GSM6592052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592053,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Unstable,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1731,36601,counts,pixel,3.9632907852841317,platform_constant,True,H&E,3.9632907852841317,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592053,,,train,hesrt,samples/GSE213688/GSM6592053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592054,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1596,36601,counts,pixel,4.044621436162119,platform_constant,True,H&E,4.044621436162119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592054,,,train,hesrt,samples/GSE213688/GSM6592054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592055,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1055,36601,counts,pixel,4.009719121746315,platform_constant,True,H&E,4.009719121746315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592055,,,train,hesrt,samples/GSE213688/GSM6592055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592056,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1258,36601,counts,pixel,3.9537129980145957,platform_constant,True,H&E,3.9537129980145957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592056,,,train,hesrt,samples/GSE213688/GSM6592056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592057,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,370,36601,counts,pixel,3.929037930962169,platform_constant,True,H&E,3.929037930962169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592057,,,train,hesrt,samples/GSE213688/GSM6592057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592058,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,CL-like,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1405,36601,counts,pixel,3.920758655657871,platform_constant,True,H&E,3.920758655657871,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592058,,,train,hesrt,samples/GSE213688/GSM6592058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592059,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Metaplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2657,36601,counts,pixel,4.285526457211834,platform_constant,True,H&E,4.285526457211834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592059,,,train,hesrt,samples/GSE213688/GSM6592059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6592060,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Metaplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1295,36601,counts,pixel,4.246052527762938,platform_constant,True,H&E,4.246052527762938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592060,,,train,hesrt,samples/GSE213688/GSM6592060,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM6592061,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Metaplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3037,36601,counts,pixel,4.344736978964481,platform_constant,True,H&E,4.344736978964481,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592061,,,train,hesrt,samples/GSE213688/GSM6592061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6592062,GSE213688,GSE213688,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,Metaplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2700,36601,counts,pixel,4.344736978964481,platform_constant,True,H&E,4.344736978964481,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592062,,,train,hesrt,samples/GSE213688/GSM6592062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592131,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0006206;MONDO:0008170,fallopian tube carcinoma;ovarian cancer,disease,luna,grade 3 serous fallopian tube carcinoma,Ovarian_cancer,aged,age rule: bare number read as years,aged,66,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3356,16129,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592131,,,train,hesrt,samples/GSE213699/GSM6592131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6592132,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high grade serous ovarian carcinoma,Ovarian_cancer,aged,age rule: bare number read as years,aged,71,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2272,15848,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592132,,,train,hesrt,samples/GSE213699/GSM6592132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592133,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,peritoneum,luna,UBERON:0003688,omentum,Ovary,metastasis,MONDO:0005140,ovarian carcinoma,disease,luna,high grade serous ovarian carcinoma,Omentum,aged,age rule: bare number read as years,aged,71,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2254,14799,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592133,,,train,hesrt,samples/GSE213699/GSM6592133,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6592134,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high grade serous ovarian carcinoma,Ovarian_cancer,adult,age rule: bare number read as years,adult,43,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3139,15509,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592134,,,train,hesrt,samples/GSE213699/GSM6592134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592135,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,Undifferentiated SMARCA4/SMARCA2-deficient malignant neoplasm,Ovarian_cancer,adult,age rule: bare number read as years,adult,35,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2142,15005,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592135,,,train,hesrt,samples/GSE213699/GSM6592135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592136,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,peritoneum,luna,UBERON:0003688,omentum,Ovary,metastasis,MONDO:0005140,ovarian carcinoma,disease,luna,high grade serous ovarian carcinoma,Omentum,adult,age rule: bare number read as years,adult,35,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3107,14346,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592136,,,train,hesrt,samples/GSE213699/GSM6592136,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592137,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,Undifferentiated SMARCA4/SMARCA2-deficient malignant neoplasm,Ovarian_cancer,adult,age rule: bare number read as years,adult,35,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2495,15359,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592137,,,train,hesrt,samples/GSE213699/GSM6592137,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592138,GSE213699,GSE213699,Spatial transcriptomics of ovarian cancer tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170;MONDO:0004993;MONDO:0020665,ovarian cancer;carcinoma;high grade malignant neoplasm,disease,luna,"High grade serous carcinoma (11 cm) involving ovarian surface and parenchyma, and fallopian tube serosa, arising in a background of serous tubal intraepithelial carcinoma",Ovarian_cancer,adult,age rule: bare number read as years,adult,48,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4156,15454,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592138,,,train,hesrt,samples/GSE213699/GSM6592138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6600043,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_1,CTRL_1,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,23669,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600043,,,train,sda-all,samples/GSE214138/GSM6600043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6600044,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_2,CTRL_2,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,22858,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600044,,,train,sda-all,samples/GSE214138/GSM6600044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6600045,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_3,CTRL_3,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,19318,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600045,,,train,sda-all,samples/GSE214138/GSM6600045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM6600046,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_4,CTRL_4,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,22369,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600046,,,train,sda-all,samples/GSE214138/GSM6600046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6600047,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_4,CTRL_4,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,23234,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600047,,,train,sda-all,samples/GSE214138/GSM6600047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6600048,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_5,CTRL_5,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,24113,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600048,,,train,sda-all,samples/GSE214138/GSM6600048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6600049,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,,,normal,luna,,CTRL,not stated,luna,not stated,,unknown,not stated,,GSE214138:CTRL_6,CTRL_6,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,20161,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600049,,,train,sda-all,samples/GSE214138/GSM6600049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6600050,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,MONDO:0002009,major depressive disorder,disease,luna,,MDD,not stated,luna,not stated,,unknown,not stated,,GSE214138:MDD_1,MDD_1,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,20376,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600050,,,train,sda-all,samples/GSE214138/GSM6600050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM6600051,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,MONDO:0002009,major depressive disorder,disease,luna,,MDD,not stated,luna,not stated,,unknown,not stated,,GSE214138:MDD_3,MDD_3,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,23620,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600051,,,train,sda-all,samples/GSE214138/GSM6600051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6600052,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,MONDO:0002009,major depressive disorder,disease,luna,,MDD,not stated,luna,not stated,,unknown,not stated,,GSE214138:MDD_3,MDD_3,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,22925,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600052,,,train,sda-all,samples/GSE214138/GSM6600052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6600053,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,MONDO:0002009,major depressive disorder,disease,luna,,MDD,not stated,luna,not stated,,unknown,not stated,,GSE214138:MDD_4,MDD_4,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,25744,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600053,,,train,sda-all,samples/GSE214138/GSM6600053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM6600054,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,MONDO:0002009,major depressive disorder,disease,luna,,MDD,not stated,luna,not stated,,unknown,not stated,,GSE214138:MDD_4,MDD_4,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,24777,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600054,,,train,sda-all,samples/GSE214138/GSM6600054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM6600055,GSE214138,GSE214138,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus (Brain),primary tissue,MONDO:0002009,major depressive disorder,disease,luna,,MDD,not stated,luna,not stated,,unknown,not stated,,GSE214138:MDD_5,MDD_5,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,2500,21783,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM6600055,,,train,sda-all,samples/GSE214138/GSM6600055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM6604482,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 1st day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3141,31053,counts,pixel,3.9864752448956544,platform_constant,True,H&E,3.9864752448956544,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604482,,,train,hesrt,samples/GSE214349/GSM6604482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604483,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 1st day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3123,31053,counts,pixel,3.910929179274516,platform_constant,True,H&E,3.910929179274516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604483,,,train,hesrt,samples/GSE214349/GSM6604483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604484,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 1st day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3188,31053,counts,pixel,3.9933059216106925,platform_constant,True,H&E,3.9933059216106925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604484,,,train,hesrt,samples/GSE214349/GSM6604484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6604485,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 1st day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3049,31053,counts,pixel,3.95901653636313,platform_constant,True,H&E,3.95901653636313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604485,,,train,hesrt,samples/GSE214349/GSM6604485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6604486,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 1st day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3166,31053,counts,pixel,3.9959015444416024,platform_constant,True,H&E,3.9959015444416024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604486,,,train,hesrt,samples/GSE214349/GSM6604486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604487,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 1st day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3168,31053,counts,pixel,3.9752734682845325,platform_constant,True,H&E,3.9752734682845325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604487,,,train,hesrt,samples/GSE214349/GSM6604487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604488,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 3rd day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3230,31053,counts,pixel,4.027534312433566,platform_constant,True,H&E,4.027534312433566,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604488,,,train,hesrt,samples/GSE214349/GSM6604488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604489,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 3rd day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3107,31053,counts,pixel,3.999862804705772,platform_constant,True,H&E,3.999862804705772,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604489,,,train,hesrt,samples/GSE214349/GSM6604489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6604490,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 3rd day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3250,31053,counts,pixel,4.108196705700332,platform_constant,True,H&E,4.108196705700332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604490,,,train,hesrt,samples/GSE214349/GSM6604490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6604491,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 3rd day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2990,31053,counts,pixel,4.044657524822522,platform_constant,True,H&E,4.044657524822522,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604491,,,train,hesrt,samples/GSE214349/GSM6604491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604492,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 3rd day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3066,31053,counts,pixel,4.1083334709049995,platform_constant,True,H&E,4.1083334709049995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604492,,,train,hesrt,samples/GSE214349/GSM6604492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6604493,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 7th day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3145,31053,counts,pixel,4.024726671393898,platform_constant,True,H&E,4.024726671393898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604493,,,train,hesrt,samples/GSE214349/GSM6604493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6604494,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 7th day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3099,31053,counts,pixel,4.004235142405109,platform_constant,True,H&E,4.004235142405109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604494,,,train,hesrt,samples/GSE214349/GSM6604494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6604495,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,The needle-puncture group with blood injection at 7th day,adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3003,31053,counts,pixel,3.983743088618563,platform_constant,True,H&E,3.983743088618563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604495,,,train,hesrt,samples/GSE214349/GSM6604495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6604496,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,The no-surgery group (control),adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3232,31053,counts,pixel,4.0950532754119555,platform_constant,True,H&E,4.0950532754119555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604496,,,train,hesrt,samples/GSE214349/GSM6604496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6604497,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,The no-surgery group (control),adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3156,31053,counts,pixel,4.062568211028085,platform_constant,True,H&E,4.062568211028085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604497,,,train,hesrt,samples/GSE214349/GSM6604497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604498,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,The needle-puncture group without blood injection (sham),adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3027,31053,counts,pixel,4.105191283514357,platform_constant,True,H&E,4.105191283514357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604498,,,train,hesrt,samples/GSE214349/GSM6604498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6604499,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,The needle-puncture group without blood injection (sham),adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3070,31053,counts,pixel,3.9772334365042967,platform_constant,True,H&E,3.9772334365042967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604499,,,train,hesrt,samples/GSE214349/GSM6604499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6604500,GSE214349,GSE214349,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,The needle-puncture group without blood injection (sham),adult,age rule: age with unit,not stated,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2791,31053,counts,pixel,4.004235142405109,platform_constant,True,H&E,4.004235142405109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604500,,,train,hesrt,samples/GSE214349/GSM6604500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6604700,GSE214363,GSE214363,Spatial transcriptomics data of GAN-KP tumor treated with regorafenib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Subcutaneous tumor,xenograft,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Vehicle control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2380,32285,counts,pixel,4.806334846853141,platform_constant,True,H&E,4.806334846853141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36543251,,GSM6604700,,,train,hesrt,samples/GSE214363/GSM6604700,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6604701,GSE214363,GSE214363,Spatial transcriptomics data of GAN-KP tumor treated with regorafenib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Subcutaneous tumor,xenograft,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Regorafenib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1594,32285,counts,pixel,4.808606719852257,platform_constant,True,H&E,4.808606719852257,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36543251,,GSM6604701,,,train,hesrt,samples/GSE214363/GSM6604701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM6612124,GSE214571,GSE214571,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,uberon_chain,UBERON:0000310,breast,GS3 breast cancer PDX,xenograft,MONDO:0006512,estrogen-receptor positive breast cancer,disease,luna,ER+ breast cancer,Placebo,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2330,68886,counts,pixel,4.098008861831066,platform_constant,True,H&E,4.098008861831066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612124,,,train,hesrt,samples/GSE214571/GSM6612124,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6612125,GSE214571,GSE214571,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,uberon_chain,UBERON:0000310,breast,GS3 breast cancer PDX,xenograft,MONDO:0006512,estrogen-receptor positive breast cancer,disease,luna,ER+ breast cancer,E2,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2863,68886,counts,pixel,4.099778838127547,platform_constant,True,H&E,4.099778838127547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612125,,,train,hesrt,samples/GSE214571/GSM6612125,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6612126,GSE214571,GSE214571,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,uberon_chain,UBERON:0000310,breast,SC31 breast cancer PDX,xenograft,MONDO:0006512,estrogen-receptor positive breast cancer,disease,luna,ER+ breast cancer,Placebo,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1967,68886,counts,pixel,4.099557578697796,platform_constant,True,H&E,4.099557578697796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612126,,,train,hesrt,samples/GSE214571/GSM6612126,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6612127,GSE214571,GSE214571,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,uberon_chain,UBERON:0000310,breast,SC31 breast cancer PDX,xenograft,MONDO:0006512,estrogen-receptor positive breast cancer,disease,luna,ER+ breast cancer,E2,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2163,68886,counts,pixel,4.250643352335137,platform_constant,True,H&E,4.250643352335137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612127,,,train,hesrt,samples/GSE214571/GSM6612127,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6613077,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),,Day3 Isoproterenol,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1917,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613077,,,train,hesrt,samples/GSE214611/GSM6613077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613078,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,1HR and 4HR Day3 Needle Pass,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3057,32285,counts,pixel,3.9412420405561437,platform_constant,True,H&E,3.9412420405561437,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613078,,,train,hesrt,samples/GSE214611/GSM6613078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613079,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),myocardial injury,Day3 TAC Needle pass,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3123,32285,counts,pixel,4.47215106287996,platform_constant,True,H&E,4.47215106287996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613079,,,train,hesrt,samples/GSE214611/GSM6613079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613080,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),,Day3 Sham Needle pass,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3540,32285,counts,pixel,4.244113146314886,platform_constant,True,H&E,4.244113146314886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-bcd077e3eb1d,cross_gse_redeposit,GSM8305627,train,hesrt,samples/GSE214611/GSM6613080,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613081,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),,Day3 Sham Needle pass,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2696,32285,counts,pixel,4.275090852894863,platform_constant,True,H&E,4.275090852894863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-3ac3354a16fd,cross_gse_redeposit,GSM8305628,train,hesrt,samples/GSE214611/GSM6613081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613082,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,1HR MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2468,32285,counts,pixel,4.47215106287996,platform_constant,True,H&E,4.47215106287996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613082,,,train,hesrt,samples/GSE214611/GSM6613082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613083,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,4HR MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2578,32285,counts,pixel,4.177474669461614,platform_constant,True,H&E,4.177474669461614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613083,,,train,hesrt,samples/GSE214611/GSM6613083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613084,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,Day1 MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2251,32285,counts,pixel,4.177891967638555,platform_constant,True,H&E,4.177891967638555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-7af6bfd9c30e,cross_gse_redeposit,GSM8305630,train,hesrt,samples/GSE214611/GSM6613084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6613085,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,Day1 MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2461,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-7d54d1f5de36,cross_gse_redeposit,GSM8305631,train,hesrt,samples/GSE214611/GSM6613085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6613086,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,Day1 MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2438,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-5bd5e1a133fe,cross_gse_redeposit,GSM8305632,train,hesrt,samples/GSE214611/GSM6613086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613087,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,Day7 MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2325,32285,counts,pixel,4.1869091074055005,platform_constant,True,H&E,4.1869091074055005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-f917081e6214,cross_gse_redeposit,GSM8305636,train,hesrt,samples/GSE214611/GSM6613087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613088,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,Day7 MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2428,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-5599f7e6a8ac,cross_gse_redeposit,GSM8305637,train,hesrt,samples/GSE214611/GSM6613088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613089,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,Day7 MI,adult,age rule: age with unit,not stated,8–12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2363,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-642cb8156460,cross_gse_redeposit,GSM8305638,train,hesrt,samples/GSE214611/GSM6613089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613090,GSE214611,GSE214611,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,,,disease,luna,ST-elevation myocardial infarction,STEMI,adult,age rule: age in years,adult,45 years,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1551,36601,counts,pixel,4.561515746777104,platform_constant,True,H&E,4.561515746777104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-0c78b365b4df,cross_gse_redeposit,GSM8305663,train,hesrt,samples/GSE214611/GSM6613090,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6619680,GSE214989,GSE214989,Spatial transcriptomics profiling of the developing mouse embryo,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2397,22496,counts,pixel,0.17211678464535718,platform_constant,True,H&E,0.5000007819945902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36604544,,GSM6619680,,,train,hesrt,samples/GSE214989/GSM6619680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6631766,GSE215305,GSE215305,Muscle injury induces a transient senescence-like state that is required for myofiber growth during muscle regeneration [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius muscle,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,muscular dystrophy,D2-mdx,adult,age rule: age with unit,adult,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1586,32285,counts,pixel,4.170060714701638,platform_constant,True,H&E,4.170060714701638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36190443,,GSM6631766,,,train,hesrt,samples/GSE215305/GSM6631766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM6634335,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0004992,cancer,disease,luna,lung adenocarcinoma,PBS control,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3189,30970,counts,pixel,5.009027073246927,platform_constant,True,H&E,5.009027073246927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634335,,,train,hesrt,samples/GSE215361/GSM6634335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6634336,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0004992,cancer,disease,luna,lung adenocarcinoma,PBS control,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2947,30970,counts,pixel,4.508124135106259,platform_constant,True,H&E,4.508124135106259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634336,,,train,hesrt,samples/GSE215361/GSM6634336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6634337,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0004992,cancer,disease,luna,lung adenocarcinoma,PBS control,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3503,30970,counts,pixel,4.508124135106268,platform_constant,True,H&E,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634337,,,train,hesrt,samples/GSE215361/GSM6634337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6634338,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0004992,cancer,disease,luna,lung adenocarcinoma,PBS control,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2937,30970,counts,pixel,4.508124135106259,platform_constant,True,H&E,4.508124135106259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634338,,,train,hesrt,samples/GSE215361/GSM6634338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6634339,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004992,cancer,disease,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3693,30970,counts,pixel,4.508124135106268,platform_constant,True,H&E,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634339,,,train,hesrt,samples/GSE215361/GSM6634339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6634340,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004992,cancer,disease,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3788,30970,counts,pixel,4.508124135106268,platform_constant,True,H&E,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634340,,,train,hesrt,samples/GSE215361/GSM6634340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6634341,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004992,cancer,disease,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3505,30970,counts,pixel,4.508124135106268,platform_constant,True,H&E,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634341,,,train,hesrt,samples/GSE215361/GSM6634341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6634342,GSE215361,GSE215361,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004992,cancer,disease,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,adult,age rule: age with unit,adult,21–25 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3072,30970,counts,pixel,5.009027073246927,platform_constant,True,H&E,5.009027073246927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634342,,,train,hesrt,samples/GSE215361/GSM6634342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6645167,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,7,unknown,not stated,,GSE215897:XDD399,XDD399,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,249,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.182351164129467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645167,,,train,sda-all,samples/GSE215897/GSM6645167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM6645168,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,7,unknown,not stated,,GSE215897:XDD399,XDD399,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,388,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.182729541510399,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645168,,,train,sda-all,samples/GSE215897/GSM6645168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM6645169,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,7,unknown,not stated,,GSE215897:XDD399,XDD399,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,319,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.1420525064838625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645169,,,train,sda-all,samples/GSE215897/GSM6645169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.29}",life_stage,low_confidence_annotation
GSM6645170,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,7,unknown,not stated,,GSE215897:XDD399,XDD399,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,234,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.140920274038452,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645170,,,train,sda-all,samples/GSE215897/GSM6645170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM6645171,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,7,unknown,not stated,,GSE215897:XDD399,XDD399,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,286,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.1839991835455335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645171,,,train,sda-all,samples/GSE215897/GSM6645171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM6645172,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,7,unknown,not stated,,GSE215897:XDD399,XDD399,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,386,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.1408822512446095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645172,,,train,sda-all,samples/GSE215897/GSM6645172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.19}",life_stage,low_confidence_annotation
GSM6645173,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,7,unknown,not stated,,GSE215897:XDD398,XDD398,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,416,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.180982537033461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645173,,,train,sda-all,samples/GSE215897/GSM6645173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.19}",life_stage,low_confidence_annotation
GSM6645174,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,7,unknown,not stated,,GSE215897:XDD398,XDD398,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,509,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.181832751105129,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645174,,,train,sda-all,samples/GSE215897/GSM6645174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM6645175,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,11,unknown,not stated,,GSE215897:XDD388,XDD388,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4529,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.11728564399837,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645175,,,train,sda-all,samples/GSE215897/GSM6645175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6645176,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,11,unknown,not stated,,GSE215897:XDD388,XDD388,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4400,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.146754216678052,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645176,,,train,sda-all,samples/GSE215897/GSM6645176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM6645177,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,11,unknown,not stated,,GSE215897:XDD388,XDD388,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4076,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.183549233465804,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645177,,,train,sda-all,samples/GSE215897/GSM6645177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM6645178,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,11,unknown,not stated,,GSE215897:XDD388,XDD388,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4234,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.156314367980642,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645178,,,train,sda-all,samples/GSE215897/GSM6645178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6645179,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,10,unknown,not stated,,GSE215897:XDD371,XDD371,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2835,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.184218558875444,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645179,,,train,sda-all,samples/GSE215897/GSM6645179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6645180,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,10,unknown,not stated,,GSE215897:XDD371,XDD371,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3056,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.225546720058437,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645180,,,train,sda-all,samples/GSE215897/GSM6645180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM6645181,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,10,unknown,not stated,,GSE215897:XDD371,XDD371,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2721,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.211737888678536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645181,,,train,sda-all,samples/GSE215897/GSM6645181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM6645182,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,10,unknown,not stated,,GSE215897:XDD371,XDD371,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3212,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.216705258781979,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645182,,,train,sda-all,samples/GSE215897/GSM6645182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM6645183,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,9,unknown,not stated,,GSE215897:XDD373,XDD373,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1487,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.183015316574518,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645183,,,train,sda-all,samples/GSE215897/GSM6645183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM6645184,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,9,unknown,not stated,,GSE215897:XDD373,XDD373,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1806,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.220601387714275,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645184,,,train,sda-all,samples/GSE215897/GSM6645184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM6645185,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,8,unknown,not stated,,GSE215897:XDD374,XDD374,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,894,33538,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.183309378053482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645185,,,train,sda-all,samples/GSE215897/GSM6645185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6645186,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,8,unknown,not stated,,GSE215897:XDD374,XDD374,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,948,33538,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.1816754017873805,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645186,,,train,sda-all,samples/GSE215897/GSM6645186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM6645187,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,12,unknown,not stated,,GSE215897:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3683,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.16726470386027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645187,,,train,sda-all,samples/GSE215897/GSM6645187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM6645188,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,12,unknown,not stated,,GSE215897:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3257,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.181132551645713,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645188,,,train,sda-all,samples/GSE215897/GSM6645188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM6645189,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,12,unknown,not stated,,GSE215897:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2913,33538,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.207117721659789,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645189,,,train,sda-all,samples/GSE215897/GSM6645189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM6645190,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,12,unknown,not stated,,GSE215897:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3734,33538,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.176850918933718,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645190,,,train,sda-all,samples/GSE215897/GSM6645190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM6645191,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,6,unknown,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,355,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.3545927397239605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645191,,,train,sda-all,samples/GSE215897/GSM6645191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.17}",life_stage,low_confidence_annotation
GSM6645192,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,6,unknown,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,371,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.356099437937214,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645192,,,train,sda-all,samples/GSE215897/GSM6645192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.18}",life_stage,low_confidence_annotation
GSM6645193,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,6,unknown,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,347,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.3547559858658325,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645193,,,train,sda-all,samples/GSE215897/GSM6645193,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM6645194,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,6,unknown,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,369,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.355006264635587,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645194,,,train,sda-all,samples/GSE215897/GSM6645194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6645195,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,8.5,unknown,not stated,,GSE215897:XDD0600_318,XDD0600_318,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,954,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.354521889092953,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645195,,,train,sda-all,samples/GSE215897/GSM6645195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM6645196,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,8.5,unknown,not stated,,GSE215897:XDD0600_318,XDD0600_318,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,940,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.35318848373424,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645196,,,train,sda-all,samples/GSE215897/GSM6645196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM6645197,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,13.5,unknown,not stated,,GSE215897:XDD359,XDD359,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3468,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.1848317544736915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645197,,,train,sda-all,samples/GSE215897/GSM6645197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM6645198,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,13.5,unknown,not stated,,GSE215897:XDD359,XDD359,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4881,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.098401479988523,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645198,,,train,sda-all,samples/GSE215897/GSM6645198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM6645199,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,13.5,unknown,not stated,,GSE215897:XDD359,XDD359,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2113,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.184960175623504,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645199,,,train,sda-all,samples/GSE215897/GSM6645199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM6645200,GSE215897,GSE215897,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,fetal,luna,fetal,13.5,unknown,not stated,,GSE215897:XDD359,XDD359,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4508,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.221256005382574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645200,,,train,sda-all,samples/GSE215897/GSM6645200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM6652504,GSE215994,GSE215994,Spatial transcriptomics on human dorsal root ganglion (DRG),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,Lumbar DRG,primary tissue,,,normal,luna,,,aged,age rule: age in years,aged,96 years,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2005,37481,counts,pixel,0.6763553368079128,platform_constant,True,H&E,0.6763553368079128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37664243,,GSM6652504,,,train,hesrt,samples/GSE215994/GSM6652504,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6652505,GSE215994,GSE215994,Spatial transcriptomics on human dorsal root ganglion (DRG),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,Lumbar DRG,primary tissue,,,normal,luna,,,aged,age rule: age in years,aged,96 years,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1775,37481,counts,pixel,0.6802563689088104,platform_constant,True,H&E,0.6802563689088104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37664243,,GSM6652505,,,train,hesrt,samples/GSE215994/GSM6652505,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6661400,GSE216189,GSE216189,Fragment-sequencing unveils local tissue microenvironments at single cell resolution,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:0021063,malignant colon neoplasm,disease,luna,metastatic liver,intrasplenic injection with mouse colon cancer organoids,adult,age rule: age with unit,adult,8–10 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3751,32285,counts,pixel,4.9385070096183785,platform_constant,True,H&E,4.9385070096183785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38012149,10.1101/2022.10.31.514509,GSM6661400,,,train,hesrt,samples/GSE216189/GSM6661400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6661401,GSE216189,GSE216189,Fragment-sequencing unveils local tissue microenvironments at single cell resolution,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:0021063,malignant colon neoplasm,disease,luna,metastatic liver,intrasplenic injection with mouse colon cancer organoids,adult,age rule: age with unit,adult,8–10 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3606,32285,counts,pixel,4.450224830082512,platform_constant,True,H&E,4.450224830082512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38012149,10.1101/2022.10.31.514509,GSM6661401,,,train,hesrt,samples/GSE216189/GSM6661401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6661593,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,normal,luna,,Day 0,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,650,32286,counts,pixel,4.55487518674277,platform_constant,True,H&E,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661593,,,train,hesrt,samples/GSE216214/GSM6661593,sda-tissue-disease-2.5,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": NaN, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM6661594,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,normal,luna,,Day 0,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1025,32286,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661594,,,train,hesrt,samples/GSE216214/GSM6661594,sda-tissue-disease-2.5,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6661595,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,perturbation,luna,,Day 14,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,824,32286,counts,pixel,4.55487518674277,platform_constant,True,H&E,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661595,,,train,hesrt,samples/GSE216214/GSM6661595,sda-tissue-disease-2.5,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM6661596,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,perturbation,luna,,Day 14,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1017,32286,counts,pixel,4.55487518674277,platform_constant,True,H&E,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661596,,,train,hesrt,samples/GSE216214/GSM6661596,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6661597,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,perturbation,luna,,Day 21,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1495,32286,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661597,,,train,hesrt,samples/GSE216214/GSM6661597,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM6661598,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,perturbation,luna,,Day 21,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1706,32286,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661598,,,train,hesrt,samples/GSE216214/GSM6661598,sda-tissue-disease-2.5,"{""organ"": 0.42, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6661599,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,perturbation,luna,,Day 28,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,875,32286,counts,pixel,4.55487518674277,platform_constant,True,H&E,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661599,,,train,hesrt,samples/GSE216214/GSM6661599,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6661600,GSE216214,GSE216214,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,murine hindpaw,primary tissue,,,perturbation,luna,,Day 28,adult,age rule: age with unit,adult,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,873,32286,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661600,,,train,hesrt,samples/GSE216214/GSM6661600,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7837730,GSE216542,GSE216542,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,Mammary Glands,primary tissue,,,normal,luna,,,aged,age rule: age with unit,aged,18 months,female,extracted field,female,GSE216542:rep1,rep1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6597,19465,counts,pixel,0.22234523237778303,platform_constant,True,H&E,0.5000021778686704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM7837730,,,train,hesrt,samples/GSE216542/GSM7837730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7837731,GSE216542,GSE216542,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,Mammary Glands,primary tissue,,,normal,luna,,,aged,age rule: age with unit,aged,18 months,female,extracted field,female,GSE216542:rep2,rep2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9745,19465,counts,pixel,0.22209886821758984,platform_constant,True,H&E,0.50000522760335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM7837731,,,train,hesrt,samples/GSE216542/GSM7837731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155366,GSE216542,GSE216542,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,Mammary Gland,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,3 months,female,extracted field,female,GSE216542:rep1,rep1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4403,19465,counts,pixel,0.221956581327033,platform_constant,True,H&E,0.4999995238691328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM8155366,,,train,hesrt,samples/GSE216542/GSM8155366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8155367,GSE216542,GSE216542,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,Mammary Gland,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,3 months,female,extracted field,female,GSE216542:rep2,rep2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4070,19465,counts,pixel,0.22209886821758984,platform_constant,True,H&E,0.5000025360675613,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM8155367,,,train,hesrt,samples/GSE216542/GSM8155367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6703212,GSE216992,GSE216992,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001981,blood vessel,vascular graft,engineered tissue,,,disease,luna,Loeys-Dietz syndrome,TGFBR1A230T/+,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,560,17943,counts,pixel,4.8735156190764615,platform_constant,True,H&E,4.8735156190764615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703212,,,val,hesrt,samples/GSE216992/GSM6703212,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 0.98, ""disease_status"": 0.64, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM6703213,GSE216992,GSE216992,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001981,blood vessel,vascular graft,engineered tissue,,,disease,luna,Loeys-Dietz syndrome,TGFBR1A230T/+,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,865,17943,counts,pixel,4.872153563800366,platform_constant,True,H&E,4.872153563800366,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703213,,,val,hesrt,samples/GSE216992/GSM6703213,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6703214,GSE216992,GSE216992,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001981,blood vessel,vascular graft,engineered tissue,,,normal,luna,,TGFBR1+/+,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1100,17943,counts,pixel,4.545990832864003,platform_constant,True,H&E,4.545990832864003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703214,,,val,hesrt,samples/GSE216992/GSM6703214,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6703215,GSE216992,GSE216992,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001981,blood vessel,vascular graft,engineered tissue,,,normal,luna,,TGFBR1+/+,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,626,17943,counts,pixel,4.3504615208856645,platform_constant,True,H&E,4.3504615208856645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703215,,,val,hesrt,samples/GSE216992/GSM6703215,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704280,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control (NaCl),not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2522,32285,counts,pixel,4.172727152969999,platform_constant,True,H&E,4.172727152969999,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704280,,,train,hesrt,samples/GSE217058/GSM6704280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704281,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Rhynchophylline 100 mg/kg,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2831,32285,counts,pixel,4.21909098165926,platform_constant,True,H&E,4.21909098165926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,CG-01e320e18183,cross_gse_redeposit,GSM6751446,train,hesrt,samples/GSE217058/GSM6704281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6704282,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,control (NaCl),not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2752,32285,counts,pixel,4.244545553103787,platform_constant,True,H&E,4.244545553103787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,CG-19149e4dee98,cross_gse_redeposit,GSM6751447,train,hesrt,samples/GSE217058/GSM6704282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704283,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Rhynchophylline 100 mg/kg,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2816,32285,counts,pixel,4.122046120297179,platform_constant,True,H&E,4.122046120297179,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704283,,,train,hesrt,samples/GSE217058/GSM6704283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6704284,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control (NaCl),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2108,32285,counts,pixel,4.145454462545453,platform_constant,True,H&E,4.145454462545453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704284,,,train,hesrt,samples/GSE217058/GSM6704284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704285,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Rhynchophylline 100 mg/kg,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2639,32285,counts,pixel,4.180908967906745,platform_constant,True,H&E,4.180908967906745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704285,,,train,hesrt,samples/GSE217058/GSM6704285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6704286,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control (NaCl),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2741,32285,counts,pixel,4.280000060690389,platform_constant,True,H&E,4.280000060690389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704286,,,train,hesrt,samples/GSE217058/GSM6704286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704287,GSE217058,GSE217058,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Rhynchophylline 100 mg/kg,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3128,32285,counts,pixel,4.148181918650781,platform_constant,True,H&E,4.148181918650781,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704287,,,train,hesrt,samples/GSE217058/GSM6704287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8811056,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1256,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.193595338302552,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811056,,,train,sda-all,samples/GSE217237/GSM8811056,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.97, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8811057,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,825,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.190844730238008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811057,,,train,sda-all,samples/GSE217237/GSM8811057,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8811058,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1431,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.190827160760025,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811058,,,train,sda-all,samples/GSE217237/GSM8811058,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8811059,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2004,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.189794021561102,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811059,,,train,sda-all,samples/GSE217237/GSM8811059,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8811060,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2749,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.182735862319515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811060,,,train,sda-all,samples/GSE217237/GSM8811060,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8811061,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,disease,luna,,HIV,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,978,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.18957473846797,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811061,,,train,sda-all,samples/GSE217237/GSM8811061,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811062,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,not stated,luna,,HIV,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,840,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.1852193664007125,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811062,,,train,sda-all,samples/GSE217237/GSM8811062,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.15, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811063,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,disease,luna,,HIV,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1171,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.190664244444907,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811063,,,train,sda-all,samples/GSE217237/GSM8811063,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811064,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,disease,luna,,HIV,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,679,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.188455598499822,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811064,,,train,sda-all,samples/GSE217237/GSM8811064,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811065,GSE217237+GSE290350,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,disease,luna,,HIV,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1180,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.189384012662235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811065,,,train,sda-all,samples/GSE217237/GSM8811065,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 0.98, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9044528,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,760,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.140202068395069,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044528,,,train,sda-all,samples/GSE217237/GSM9044528,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9044529,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1124,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.140134807775836,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044529,,,train,sda-all,samples/GSE217237/GSM9044529,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9044530,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1280,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.139932461697267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044530,,,train,sda-all,samples/GSE217237/GSM9044530,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044531,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,712,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.185614889970947,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044531,,,train,sda-all,samples/GSE217237/GSM9044531,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9044532,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,418,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.185244073932617,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044532,,,train,sda-all,samples/GSE217237/GSM9044532,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044533,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,307,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.185861928923784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044533,,,train,sda-all,samples/GSE217237/GSM9044533,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044534,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,969,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.1400341835241585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044534,,,train,sda-all,samples/GSE217237/GSM9044534,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044535,GSE217237,GSE217237,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,Ectocervix,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1130,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.1859269702964585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044535,,,train,sda-all,samples/GSE217237/GSM9044535,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6716963,GSE217414,GSE217414,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver Metastasis,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,colorectal cancer liver metastasis,FOLFIRI+Cetuximab/Irinotecan+Cetuximab,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE217414:Patient 1,Patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2887,17943,counts,pixel,4.311973675048798,platform_constant,True,H&E,4.311973675048798,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716963,,,test,hesrt,samples/GSE217414/GSM6716963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6716964,GSE217414,GSE217414,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver Metastasis,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,colorectal cancer liver metastasis,FOLFOX,aged,age rule: bare number read as years,aged,84,female,extracted field,female,GSE217414:Patient 2,Patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3379,17943,counts,pixel,4.344437002092949,platform_constant,True,H&E,4.344437002092949,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716964,,,test,hesrt,samples/GSE217414/GSM6716964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6716965,GSE217414,GSE217414,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver Metastasis,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,colorectal cancer liver metastasis,FOLFOX,aged,age rule: bare number read as years,aged,69,male,extracted field,male,GSE217414:Patient 3,Patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2091,17943,counts,pixel,4.1869890179338585,platform_constant,True,H&E,4.1869890179338585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716965,,,test,hesrt,samples/GSE217414/GSM6716965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6716966,GSE217414,GSE217414,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver Metastasis,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,colorectal cancer liver metastasis,FOLFOX+Cetuximab/Xeloda+Cetuximab,adult,age rule: bare number read as years,adult,64,female,extracted field,female,GSE217414:Patient 4,Patient 4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2317,17943,counts,pixel,4.199622358083467,platform_constant,True,H&E,4.199622358083467,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716966,,,test,hesrt,samples/GSE217414/GSM6716966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6722694,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,801,32471,counts,pixel,4.2136713815532465,platform_constant,True,H&E,4.2136713815532465,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722694,,,val,hesrt,samples/GSE217615/GSM6722694,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6722695,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,372,32471,counts,pixel,4.213392714350981,platform_constant,True,H&E,4.213392714350981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722695,,,val,hesrt,samples/GSE217615/GSM6722695,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722696,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,371,32471,counts,pixel,4.225827751078025,platform_constant,True,H&E,4.225827751078025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722696,,,val,hesrt,samples/GSE217615/GSM6722696,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722697,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,445,32471,counts,pixel,4.2169822238258865,platform_constant,True,H&E,4.2169822238258865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722697,,,val,hesrt,samples/GSE217615/GSM6722697,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6722698,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,399,32471,counts,pixel,4.226275394359665,platform_constant,True,H&E,4.226275394359665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722698,,,val,hesrt,samples/GSE217615/GSM6722698,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722699,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,838,32471,counts,pixel,4.226275394359701,platform_constant,True,H&E,4.226275394359701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722699,,,val,hesrt,samples/GSE217615/GSM6722699,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6722700,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,747,32471,counts,pixel,4.228066916268279,platform_constant,True,H&E,4.228066916268279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722700,,,val,hesrt,samples/GSE217615/GSM6722700,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6722701,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,611,32471,counts,pixel,4.228066916268269,platform_constant,True,H&E,4.228066916268269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722701,,,val,hesrt,samples/GSE217615/GSM6722701,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722702,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,499,32471,counts,pixel,4.226275394359701,platform_constant,True,H&E,4.226275394359701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722702,,,val,hesrt,samples/GSE217615/GSM6722702,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722703,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,367,32471,counts,pixel,4.219663568358367,platform_constant,True,H&E,4.219663568358367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722703,,,val,hesrt,samples/GSE217615/GSM6722703,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722704,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,529,32471,counts,pixel,4.231540513335237,platform_constant,True,H&E,4.231540513335237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722704,,,val,hesrt,samples/GSE217615/GSM6722704,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6722705,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,430,32471,counts,pixel,4.215624967750463,platform_constant,True,H&E,4.215624967750463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722705,,,val,hesrt,samples/GSE217615/GSM6722705,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6722706,GSE217615+GSE217619,GSE217615,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],Mchenga conophoros,35575,,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,not building,adult,luna,adult,adult (>180 days),unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,346,32471,counts,pixel,4.2319890089673,platform_constant,True,H&E,4.2319890089673,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722706,,,val,hesrt,samples/GSE217615/GSM6722706,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7100173,GSE217664,GSE217664,Decoding Trp53 regulatory program in various tissues and organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,Thymus,primary tissue,,,perturbation,luna,,Trp53-/-,adult,age rule: age with unit,adult,17 weeks,female,extracted field,Female,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,440671,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40887856,,GSM7100173,,,train,sda-all,samples/GSE217664/GSM7100173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7100174,GSE217664,GSE217664,Decoding Trp53 regulatory program in various tissues and organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,Thymus,primary tissue,,,perturbation,luna,,Trp53-/-,adult,age rule: age with unit,adult,21 weeks,female,extracted field,Female,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,1116860,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40887856,,GSM7100174,,,train,sda-all,samples/GSE217664/GSM7100174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7100175,GSE217664,GSE217664,Decoding Trp53 regulatory program in various tissues and organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,Thymus,primary tissue,,,normal,luna,,Trp53+/+,adult,age rule: age with unit,adult,17 weeks,female,extracted field,Female,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,1128950,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40887856,,GSM7100175,,,train,sda-all,samples/GSE217664/GSM7100175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6727274,GSE217828,GSE217828,YAP Drives Assembly of a Spatially Colocalized Cellular Triad Required for Heart Renewal,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Control,adult,luna,adult,8-10 weeks old adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2823,32285,counts,pixel,0.6493369596450738,platform_constant,True,H&E,0.6493369596450738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38510108,,GSM6727274,,,train,hesrt,samples/GSE217828/GSM6727274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6727275,GSE217828,GSE217828,YAP Drives Assembly of a Spatially Colocalized Cellular Triad Required for Heart Renewal,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,YAP5SA,adult,luna,adult,8-10 weeks old adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2826,32285,counts,pixel,0.6493369596450738,platform_constant,True,H&E,0.6493369596450738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38510108,,GSM6727275,,,train,hesrt,samples/GSE217828/GSM6727275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6727528,GSE217843,GSE217843,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer - Spatial transcriptomics of mouse PDAC samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3444,32285,counts,pixel,4.9583369131797115,platform_constant,True,H&E,4.9583369131797115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37914939,,GSM6727528,,,train,hesrt,samples/GSE217843/GSM6727528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6727529,GSE217843+GSE217847,GSE217843,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer - Spatial transcriptomics of mouse PDAC samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,WT,not stated,luna,not stated,,female,extracted field,F,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3822,32285,counts,um,1.0,verified,True,undetermined,4.918473993149475,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37914939,,GSM6727529,,,train,sda-all,samples/GSE217843/GSM6727529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7655264,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LPDAC30,Patient LPDAC30,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,10060,97,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655264,,,train,sda-all,samples/GSE217847/GSM7655264,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655265,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LPDAC30,Patient LPDAC30,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,20754,97,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655265,,,train,sda-all,samples/GSE217847/GSM7655265,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655266,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LPDAC30,Patient LPDAC30,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,11116,98,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655266,,,train,sda-all,samples/GSE217847/GSM7655266,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655267,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET10,Patient LIMET10,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,15188,98,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655267,,,train,sda-all,samples/GSE217847/GSM7655267,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655268,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET49,Patient LIMET49,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,4395,96,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655268,,,train,sda-all,samples/GSE217847/GSM7655268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655269,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET139,Patient LIMET139,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,2035,91,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655269,,,train,sda-all,samples/GSE217847/GSM7655269,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655270,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET162,Patient LIMET162,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,4050,97,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655270,,,train,sda-all,samples/GSE217847/GSM7655270,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655271,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET163,Patient LIMET163,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,14400,97,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655271,,,train,sda-all,samples/GSE217847/GSM7655271,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7655272,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET163,Patient LIMET163,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,18724,97,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655272,,,train,sda-all,samples/GSE217847/GSM7655272,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655273,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET165,Patient LIMET165,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,8289,97,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655273,,,train,sda-all,samples/GSE217847/GSM7655273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7655274,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET165,Patient LIMET165,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,15620,98,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655274,,,train,sda-all,samples/GSE217847/GSM7655274,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655275,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET325,Patient LIMET325,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,22290,98,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655275,,,train,sda-all,samples/GSE217847/GSM7655275,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655276,GSE217847+GSE237846,GSE217847,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,PDAC,,not stated,luna,not stated,,unknown,not stated,,GSE217847:Patient LIMET325,Patient LIMET325,,,Other,release v3,not named in GEO,sequencing-based,other,,,cell,2425,94,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655276,,,train,sda-all,samples/GSE217847/GSM7655276,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6733377,GSE218046,GSE218046,Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,Distal tibia fracture callus,primary tissue,MONDO:0005320;MONDO:0018975,tibia fracture;neurofibromatosis type 1,disease,luna,,10-day post-surgery,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3045,19465,counts,pixel,0.44052863436123346,platform_constant,True,H&E,0.5000023910312669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38990653,,GSM6733377,,,train,hesrt,samples/GSE218046/GSM6733377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM6733378,GSE218046,GSE218046,Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,Distal tibia fracture callus,primary tissue,MONDO:0005320;MONDO:0018975,tibia fracture;neurofibromatosis type 1,disease,luna,,10-day post-surgery,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3335,19465,counts,pixel,0.44052863436123346,platform_constant,True,H&E,0.49999479280574033,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38990653,,GSM6733378,,,train,hesrt,samples/GSE218046/GSM6733378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM6751471,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor heart,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,650,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.670762685829737,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751471,,,train,sda-all,samples/GSE218539/GSM6751471,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6751472,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006630,left atrium auricular region,donor heart,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1015,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.501209993905942,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751472,,,train,sda-all,samples/GSE218539/GSM6751472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6751473,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor heart,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1095,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.01853952468702,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751473,,,train,sda-all,samples/GSE218539/GSM6751473,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6751474,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006630,left atrium auricular region,donor heart,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1110,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.029760173368945,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751474,,,train,sda-all,samples/GSE218539/GSM6751474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6751475,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1641,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.582361090968574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751475,,,train,sda-all,samples/GSE218539/GSM6751475,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6751476,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,574,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.673743470949609,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751476,,,train,sda-all,samples/GSE218539/GSM6751476,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751477,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,973,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.691214479033165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751477,,,train,sda-all,samples/GSE218539/GSM6751477,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751478,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,515,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.635443473054003,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751478,,,train,sda-all,samples/GSE218539/GSM6751478,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751479,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,663,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.652633679050158,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751479,,,train,sda-all,samples/GSE218539/GSM6751479,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6751480,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2373,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.59728282645702,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751480,,,train,sda-all,samples/GSE218539/GSM6751480,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6751481,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0002016,pulmonary vein,donor lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1061,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.544792653300453,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751481,,,train,sda-all,samples/GSE218539/GSM6751481,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751482,GSE218539,GSE218539,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,uberon_chain,UBERON:0002016,pulmonary vein,donor heart,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,566,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.605003404431988,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751482,,,train,sda-all,samples/GSE218539/GSM6751482,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6756178,GSE218761,GSE218761,Cardiac reprogramming and Gata4 overexpression reduce fibrosis and improve diastolic dysfunction in heart failure with preserved ejection fraction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,,,normal,luna,,Ctrl,adult,age rule: age with unit,adult,15 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1935,19465,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39673349,10.1161/circulationaha.123.067504,GSM6756178,,,test,hesrt,samples/GSE218761/GSM6756178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6756179,GSE218761,GSE218761,Cardiac reprogramming and Gata4 overexpression reduce fibrosis and improve diastolic dysfunction in heart failure with preserved ejection fraction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,MONDO:0005252,heart failure,disease,luna,heart failure with preserved ejection fraction,TTg_HF,adult,age rule: age with unit,adult,15 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2157,19465,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39673349,10.1161/circulationaha.123.067504,GSM6756179,,,test,hesrt,samples/GSE218761/GSM6756179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM6756180,GSE218761,GSE218761,Cardiac reprogramming and Gata4 overexpression reduce fibrosis and improve diastolic dysfunction in heart failure with preserved ejection fraction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart transverse section,primary tissue,MONDO:0005252,heart failure,disease,luna,heart failure with preserved ejection fraction,Ctrl_HF,adult,age rule: age with unit,adult,15 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2994,19465,counts,pixel,0.7575540190785702,platform_constant,True,H&E,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39673349,10.1161/circulationaha.123.067504,GSM6756180,,,test,hesrt,samples/GSE218761/GSM6756180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM6760693,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,aged,age rule: age in years,aged,70 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2454,33538,counts,um,1.0,verified,True,H&E-like (heuristic),3.993312739156748,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760693,,,train,sda-all,samples/GSE218951/GSM6760693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6760694,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,aged,age rule: age in years,aged,70 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2551,33538,counts,um,1.0,verified,True,H&E-like (heuristic),3.993217798025974,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760694,,,train,sda-all,samples/GSE218951/GSM6760694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760695,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,aged,age rule: age in years,aged,84 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3244,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.024040512900366,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760695,,,train,sda-all,samples/GSE218951/GSM6760695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6760696,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,aged,age rule: age in years,aged,84 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3202,33538,counts,um,1.0,verified,True,H&E-like (heuristic),3.9940313907466214,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760696,,,train,sda-all,samples/GSE218951/GSM6760696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760697,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,aged,age rule: age in years,aged,71 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2284,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.284762259725873,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760697,,,train,sda-all,samples/GSE218951/GSM6760697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760698,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,aged,age rule: age in years,aged,71 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1899,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.159626938764066,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760698,,,train,sda-all,samples/GSE218951/GSM6760698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6760699,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,adult,age rule: age in years,adult,52 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3099,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.162403846527313,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760699,,,train,sda-all,samples/GSE218951/GSM6760699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760700,GSE218951,GSE218951,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,adult,age rule: age in years,adult,52 year-old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3173,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.1592966167190895,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760700,,,train,sda-all,samples/GSE218951/GSM6760700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6761309,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,0 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1171,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.568311539181383,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761309,,,train,sda-all,samples/GSE218970/GSM6761309,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6761310,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,0 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1261,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.564670534154498,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761310,,,train,sda-all,samples/GSE218970/GSM6761310,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM6761313,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,1 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1791,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.57316111754209,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761313,,,train,sda-all,samples/GSE218970/GSM6761313,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.71}",,
GSM6761314,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,1 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1620,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.56604689062661,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761314,,,train,sda-all,samples/GSE218970/GSM6761314,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM6761315,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,1 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1819,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.565809595299593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761315,,,train,sda-all,samples/GSE218970/GSM6761315,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM6761316,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,1 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1724,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.560197036039525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761316,,,train,sda-all,samples/GSE218970/GSM6761316,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6761317,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,3 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1765,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.565952278540959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761317,,,train,sda-all,samples/GSE218970/GSM6761317,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM6761318,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,3 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1655,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.563688508769138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761318,,,train,sda-all,samples/GSE218970/GSM6761318,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 0.6000000000000001}",,
GSM6761319,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,3 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1717,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.561787157328966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761319,,,train,sda-all,samples/GSE218970/GSM6761319,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.6900000000000001}",,
GSM6761320,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,3 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1652,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.569378787487738,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761320,,,train,sda-all,samples/GSE218970/GSM6761320,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM6761321,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,6 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1257,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.570027840773442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761321,,,train,sda-all,samples/GSE218970/GSM6761321,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": NaN, ""life_stage"": 0.63}",,
GSM6761322,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,6 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1314,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.5626347940849294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761322,,,train,sda-all,samples/GSE218970/GSM6761322,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.7000000000000001}",,
GSM6761323,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,6 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1402,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.568744146405088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761323,,,train,sda-all,samples/GSE218970/GSM6761323,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.74}",,
GSM6761324,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,6 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1313,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.562511001124008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761324,,,train,sda-all,samples/GSE218970/GSM6761324,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.65}",,
GSM6761325,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,adult,luna,adult,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1805,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.572083402525098,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761325,,,train,sda-all,samples/GSE218970/GSM6761325,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6761326,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1696,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.560022612908707,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761326,,,train,sda-all,samples/GSE218970/GSM6761326,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.29}",life_stage,low_confidence_annotation
GSM6761327,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1858,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.566283081673143,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761327,,,train,sda-all,samples/GSE218970/GSM6761327,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM6761328,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1701,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.560199967776959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761328,,,train,sda-all,samples/GSE218970/GSM6761328,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM6761329,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1591,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.555236200327467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761329,,,train,sda-all,samples/GSE218970/GSM6761329,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.76}",,
GSM6761330,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1632,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.564181138038683,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761330,,,train,sda-all,samples/GSE218970/GSM6761330,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6761331,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1736,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.558893050486723,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761331,,,train,sda-all,samples/GSE218970/GSM6761331,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM6761332,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1800,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.565163493568598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761332,,,train,sda-all,samples/GSE218970/GSM6761332,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM6761333,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1721,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.566347522423131,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761333,,,train,sda-all,samples/GSE218970/GSM6761333,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.76}",,
GSM6761334,GSE218970,GSE218970,A Spatial Transcriptome for Germinating Barley Grain,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,germinating grain,primary tissue,,,normal,luna,,,not stated,luna,not stated,24 HAI,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1752,39876,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.560899489751088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761334,,,train,sda-all,samples/GSE218970/GSM6761334,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM6774303,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,783,33538,counts,pixel,4.148883752011664,platform_constant,True,H&E,4.148883752011664,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774303,,,train,hesrt,samples/GSE219120/GSM6774303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6774304,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1202,33538,counts,pixel,4.14892229303872,platform_constant,True,H&E,4.14892229303872,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774304,,,train,hesrt,samples/GSE219120/GSM6774304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6774305,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1454,33538,counts,pixel,4.148922293038691,platform_constant,True,H&E,4.148922293038691,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774305,,,train,hesrt,samples/GSE219120/GSM6774305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6774306,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1378,33538,counts,pixel,4.148883752011664,platform_constant,True,H&E,4.148883752011664,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774306,,,train,hesrt,samples/GSE219120/GSM6774306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6774307,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W08,unknown,not stated,,GSE219120:XDD376,XDD376,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1100,33538,counts,pixel,4.14892229303873,platform_constant,True,H&E,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774307,,,train,hesrt,samples/GSE219120/GSM6774307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6774308,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W08,unknown,not stated,,GSE219120:XDD376,XDD376,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1673,33538,counts,pixel,4.14892229303873,platform_constant,True,H&E,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774308,,,train,hesrt,samples/GSE219120/GSM6774308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6774309,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W08,unknown,not stated,,GSE219120:XDD376,XDD376,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1251,33538,counts,pixel,4.14892229303873,platform_constant,True,H&E,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774309,,,train,hesrt,samples/GSE219120/GSM6774309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM6774310,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W08,unknown,not stated,,GSE219120:XDD376,XDD376,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1527,33538,counts,pixel,4.14892229303873,platform_constant,True,H&E,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774310,,,train,hesrt,samples/GSE219120/GSM6774310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6774311,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W09,unknown,not stated,,GSE219120:XDD373,XDD373,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1764,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774311,,,train,hesrt,samples/GSE219120/GSM6774311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM6774312,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W09,unknown,not stated,,GSE219120:XDD373,XDD373,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1553,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774312,,,train,hesrt,samples/GSE219120/GSM6774312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM6774313,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W09,unknown,not stated,,GSE219120:XDD373,XDD373,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,765,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774313,,,train,hesrt,samples/GSE219120/GSM6774313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6774314,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W09,unknown,not stated,,GSE219120:XDD373,XDD373,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,709,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774314,,,train,hesrt,samples/GSE219120/GSM6774314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM6774315,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W05,unknown,not stated,,GSE219120:XHU346,XHU346,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,118,33538,counts,pixel,4.193103351666756,platform_constant,True,H&E,4.193103351666756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774315,,,train,hesrt,samples/GSE219120/GSM6774315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM6774316,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W05,unknown,not stated,,GSE219120:XHU346,XHU346,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,82,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774316,,,train,hesrt,samples/GSE219120/GSM6774316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6774317,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1290,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774317,,,train,hesrt,samples/GSE219120/GSM6774317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6774318,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1791,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774318,,,train,hesrt,samples/GSE219120/GSM6774318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6774319,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W05,unknown,not stated,,GSE219120:XHU346,XHU346,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,107,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774319,,,train,hesrt,samples/GSE219120/GSM6774319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM6774320,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W05,unknown,not stated,,GSE219120:XHU346,XHU346,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,131,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774320,,,train,hesrt,samples/GSE219120/GSM6774320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6774321,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W05,unknown,not stated,,GSE219120:XHU346,XHU346,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,101,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774321,,,train,hesrt,samples/GSE219120/GSM6774321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM6774322,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,W05,unknown,not stated,,GSE219120:XHU346,XHU346,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,77,33538,counts,pixel,4.193103351666767,platform_constant,True,H&E,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774322,,,train,hesrt,samples/GSE219120/GSM6774322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6774323,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1564,33538,counts,pixel,4.14892229303873,platform_constant,True,H&E,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774323,,,train,hesrt,samples/GSE219120/GSM6774323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6774324,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1579,33538,counts,pixel,4.176222772511594,platform_constant,True,H&E,4.176222772511594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774324,,,train,hesrt,samples/GSE219120/GSM6774324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM6774325,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1633,33538,counts,pixel,4.193064400223873,platform_constant,True,H&E,4.193064400223873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774325,,,train,hesrt,samples/GSE219120/GSM6774325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.88}",,
GSM6774326,GSE219120+GSE219122,GSE219120,Spatiotemporal multi-omics decoding of the developing human spinal cord I,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,fetal,luna,fetal,W12,unknown,not stated,,GSE219120:XDD369,XDD369,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1504,33538,counts,pixel,4.176222772511575,platform_constant,True,H&E,4.176222772511575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774326,,,train,hesrt,samples/GSE219120/GSM6774326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6796864,GSE220218,GSE220218,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,blood vessel,luna,UBERON:0001625,right coronary artery,Right coronary artery,primary tissue,MONDO:0021661;MONDO:0005439,coronary atherosclerosis;familial hypercholesterolemia,disease,luna,,IGF1,adult,luna,adult,20 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2196,21303,counts,pixel,4.776003421428912,platform_constant,True,H&E,4.776003421428912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796864,,,train,hesrt,samples/GSE220218/GSM6796864,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6796865,GSE220218,GSE220218,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,blood vessel,luna,UBERON:0001625,right coronary artery,Right coronary artery,primary tissue,MONDO:0021661;MONDO:0005439,coronary atherosclerosis;familial hypercholesterolemia,disease,luna,,IGF1,adult,luna,adult,20 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1621,21303,counts,pixel,5.568333395810019,platform_constant,True,H&E,5.568333395810019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796865,,,train,hesrt,samples/GSE220218/GSM6796865,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6796866,GSE220218,GSE220218,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,blood vessel,luna,UBERON:0001625,right coronary artery,Right coronary artery,primary tissue,MONDO:0021661;MONDO:0005439,coronary atherosclerosis;familial hypercholesterolemia,disease,luna,,control,adult,luna,adult,20 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1441,21303,counts,pixel,5.55416664361686,platform_constant,True,H&E,5.55416664361686,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796866,,,train,hesrt,samples/GSE220218/GSM6796866,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6796867,GSE220218,GSE220218,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,blood vessel,luna,UBERON:0001625,right coronary artery,Right coronary artery,primary tissue,MONDO:0021661;MONDO:0005439,coronary atherosclerosis;familial hypercholesterolemia,disease,luna,,control,adult,luna,adult,20 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,963,21303,counts,pixel,5.547500030760883,platform_constant,True,H&E,5.547500030760883,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796867,,,train,hesrt,samples/GSE220218/GSM6796867,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6806992,GSE220572,GSE220572,Reconstruction of 3-dimensional tissue organization at the single-cell resolution [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0001332,prepuce of penis,Foreskin,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,Neonatal,male,extracted field,male,GSE220572:donor1,donor1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,659,17943,counts,pixel,4.983897548347086,platform_constant,True,H&E,4.983897548347086,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36711844;38915088,,GSM6806992,,,train,hesrt,samples/GSE220572/GSM6806992,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6806993,GSE220572,GSE220572,Reconstruction of 3-dimensional tissue organization at the single-cell resolution [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0001332,prepuce of penis,Foreskin,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,Neonatal,male,extracted field,male,GSE220572:donor1,donor1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,653,17943,counts,pixel,4.975097036798376,platform_constant,True,H&E,4.975097036798376,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36711844;38915088,,GSM6806993,,,train,hesrt,samples/GSE220572/GSM6806993,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM6820295,GSE220799,GSE220799,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,juvenile,6–8 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1807,32589,counts,pixel,4.795038284650151,platform_constant,True,H&E,4.795038284650151,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820295,,,train,hesrt,samples/GSE220799/GSM6820295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6820296,GSE220799,GSE220799,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,juvenile,6–8 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2174,32589,counts,pixel,4.795038284650151,platform_constant,True,H&E,4.795038284650151,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820296,,,train,hesrt,samples/GSE220799/GSM6820296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6820297,GSE220799,GSE220799,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Sema6d-/-,adult,age rule: age with unit,juvenile,6–8 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2101,32589,counts,pixel,4.3614505264359185,platform_constant,True,H&E,4.3614505264359185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820297,,,train,hesrt,samples/GSE220799/GSM6820297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6820298,GSE220799,GSE220799,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Sema6d-/-,adult,age rule: age with unit,juvenile,6–8 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2296,32589,counts,pixel,4.79694654550583,platform_constant,True,H&E,4.79694654550583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820298,,,train,hesrt,samples/GSE220799/GSM6820298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6820635,GSE220817,GSE220817,neuroendocrine control of planarian regeneration (Spatial transcriptome),Schmidtea mediterranea,79327,freshwater planarian,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,other,luna,UBERON:0000974,neck,neck,primary tissue,,,perturbation,luna,,amputation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,929,36035,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6820635,,,train,sda-all,samples/GSE220817/GSM6820635,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.97, ""disease_status"": 0.96, ""uberon"": 0.91, ""life_stage"": 0.76}",,
GSM6833484,GSE220978,GSE220978,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,OSF-associated OSCC,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,OSF-associated OSCC,OSF-associated OSCC,not stated,luna,not stated,,unknown,not stated,,GSE220978:Patient 1,Patient 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4199,36601,counts,pixel,4.272032412948065,platform_constant,True,H&E,4.272032412948065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833484,,,train,hesrt,samples/GSE220978/GSM6833484,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6833485,GSE220978,GSE220978,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,OSF-associated OSCC,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,OSF-associated OSCC,OSF-associated OSCC,not stated,luna,not stated,,unknown,not stated,,GSE220978:Patient 2,Patient 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4290,36601,counts,pixel,4.2720324129480645,platform_constant,True,H&E,4.2720324129480645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833485,,,train,hesrt,samples/GSE220978/GSM6833485,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM6833486,GSE220978,GSE220978,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,OSF-associated OSCC,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,OSF-associated OSCC,OSF-associated OSCC,not stated,luna,not stated,,unknown,not stated,,GSE220978:Patient 3,Patient 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4514,36601,counts,pixel,4.244187368137843,platform_constant,True,H&E,4.244187368137843,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833486,,,train,hesrt,samples/GSE220978/GSM6833486,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM6833487,GSE220978,GSE220978,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,OSF-associated OSCC,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,OSF-associated OSCC,OSF-associated OSCC,not stated,luna,not stated,,unknown,not stated,,GSE220978:Patient 4,Patient 4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4316,36601,counts,pixel,4.202784364767996,platform_constant,True,H&E,4.202784364767996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833487,,,train,hesrt,samples/GSE220978/GSM6833487,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM6845429,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,perturbation,luna,,PBS inoculation,adult,age rule: postnatal day,juvenile,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,38648,462,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845429,,,val,sda-all,samples/GSE221106/GSM6845429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.63}",disease_status,low_confidence_annotation
GSM6845430,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005550,infectious disease,disease,mondo_predicate (Luna: perturbation),,GAS inoculation,adult,age rule: postnatal day,juvenile,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,36539,462,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845430,,,val,sda-all,samples/GSE221106/GSM6845430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.91}",,
GSM6845431,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,perturbation,luna,,PBS inoculation,adult,age rule: postnatal day,adult,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,30947,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6845431,,,val,sda-all,samples/GSE221106/GSM6845431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM6845432,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005550,infectious disease,disease,mondo_predicate (Luna: perturbation),,GAS inoculation,adult,age rule: postnatal day,juvenile,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,41242,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6845432,,,val,sda-all,samples/GSE221106/GSM6845432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6845433,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,perturbation,luna,,PBS inoculation,adult,age rule: postnatal day,adult,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,29520,462,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845433,,,val,sda-all,samples/GSE221106/GSM6845433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM6845434,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005550,infectious disease,disease,mondo_predicate (Luna: perturbation),,GAS inoculation,adult,age rule: postnatal day,juvenile,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,30327,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM6845434,,,val,sda-all,samples/GSE221106/GSM6845434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.98, ""life_stage"": 0.91}",,
GSM6845435,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,perturbation,luna,,PBS inoculation,adult,age rule: postnatal day,adult,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,67611,462,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845435,,,val,sda-all,samples/GSE221106/GSM6845435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM6845436,GSE221106,GSE221106,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005550,infectious disease,disease,mondo_predicate (Luna: perturbation),,GAS inoculation,adult,age rule: postnatal day,juvenile,P53,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,29551,462,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845436,,,val,sda-all,samples/GSE221106/GSM6845436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM6859066,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Control,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 1,Mouse 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,734,32287,counts,pixel,4.461864366065149,platform_constant,True,H&E,4.461864366065149,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859066,,,train,hesrt,samples/GSE221359/GSM6859066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6859067,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Resistant,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 1,Mouse 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1284,32287,counts,pixel,4.571186450048903,platform_constant,True,H&E,4.571186450048903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859067,,,train,hesrt,samples/GSE221359/GSM6859067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6859068,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Control,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 2,Mouse 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1818,32287,counts,pixel,4.622033986539709,platform_constant,True,H&E,4.622033986539709,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859068,,,train,hesrt,samples/GSE221359/GSM6859068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6859069,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Partial Responder,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 1,Mouse 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1044,32287,counts,pixel,4.668643996132931,platform_constant,True,H&E,4.668643996132931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859069,,,train,hesrt,samples/GSE221359/GSM6859069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM6859070,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Partial Responder,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 2,Mouse 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1494,32287,counts,pixel,4.360169484113136,platform_constant,True,H&E,4.360169484113136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859070,,,train,hesrt,samples/GSE221359/GSM6859070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6859071,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Resistant,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 2,Mouse 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1158,32287,counts,pixel,4.560169819629645,platform_constant,True,H&E,4.560169819629645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859071,,,train,hesrt,samples/GSE221359/GSM6859071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6859072,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Control,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 3,Mouse 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1843,32287,counts,pixel,4.412711969782344,platform_constant,True,H&E,4.412711969782344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859072,,,train,hesrt,samples/GSE221359/GSM6859072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6859073,GSE221359,GSE221359,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0024331,metastatic malignant neoplasm in the liver;colorectal carcinoma,disease,luna,liver metastasis of colorectal cancer,Partial Responder,not stated,luna,not stated,,unknown,not stated,,GSE221359:Mouse 3,Mouse 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1544,32287,counts,pixel,4.224603095307361,platform_constant,True,H&E,4.224603095307361,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859073,,,train,hesrt,samples/GSE221359/GSM6859073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6886495,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0004765,skeletal element,bone/cartilage,primary tissue,,,normal,luna,,RRST,neonatal or infant,age rule: postnatal day,neonatal or infant,4 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1305,19465,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886495,,,train,hesrt,samples/GSE221571/GSM6886495,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.24, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886496,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0004765,skeletal element,bone/cartilage,primary tissue,,,normal,luna,,RRST,neonatal or infant,age rule: postnatal day,neonatal or infant,4 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1202,19465,counts,pixel,4.148965623454878,platform_constant,True,H&E,4.148965623454878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886496,,,train,hesrt,samples/GSE221571/GSM6886496,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886497,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0004765,skeletal element,bone/cartilage,primary tissue,,,normal,luna,,standard,neonatal or infant,age rule: postnatal day,neonatal or infant,4 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1298,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886497,,,train,hesrt,samples/GSE221571/GSM6886497,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.22, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886498,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0004765,skeletal element,bone/cartilage,primary tissue,,,normal,luna,,RRST,neonatal or infant,age rule: postnatal day,neonatal or infant,11 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2935,19465,counts,pixel,4.1134803392552035,platform_constant,True,H&E,4.1134803392552035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886498,,,train,hesrt,samples/GSE221571/GSM6886498,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.25, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886499,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0004765,skeletal element,bone/cartilage,primary tissue,,,normal,luna,,RRST,neonatal or infant,age rule: postnatal day,neonatal or infant,11 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1788,19465,counts,pixel,4.1418245466503665,platform_constant,True,H&E,4.1418245466503665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886499,,,train,hesrt,samples/GSE221571/GSM6886499,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.29, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886500,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0004765,skeletal element,bone/cartilage,primary tissue,,,normal,luna,,standard,neonatal or infant,age rule: postnatal day,neonatal or infant,11 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1240,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886500,,,train,hesrt,samples/GSE221571/GSM6886500,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.26, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886501,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,RRST,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4426,19465,counts,pixel,4.113450290404371,platform_constant,True,H&E,4.113450290404371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886501,,,train,hesrt,samples/GSE221571/GSM6886501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM6886502,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,RRST,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4492,19465,counts,pixel,4.148965623454898,platform_constant,True,H&E,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886502,,,train,hesrt,samples/GSE221571/GSM6886502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6886503,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,RRST,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4159,19465,counts,pixel,4.148959456754007,platform_constant,True,H&E,4.148959456754007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886503,,,train,hesrt,samples/GSE221571/GSM6886503,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM6886504,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,RRST,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4166,19465,counts,pixel,4.106484746764244,platform_constant,True,H&E,4.106484746764244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886504,,,train,hesrt,samples/GSE221571/GSM6886504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM6886505,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,standard,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4514,32285,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886505,,,train,hesrt,samples/GSE221571/GSM6886505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM6886506,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,standard,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4332,32285,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886506,,,train,hesrt,samples/GSE221571/GSM6886506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM6886507,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,standard,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4394,32285,counts,pixel,4.193097323315167,platform_constant,True,H&E,4.193097323315167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886507,,,train,hesrt,samples/GSE221571/GSM6886507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6886508,GSE221571,GSE221571,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,standard,not stated,luna,not stated,young mice,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4114,32285,counts,pixel,3.9958775931710244,platform_constant,True,H&E,3.9958775931710244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886508,,,train,hesrt,samples/GSE221571/GSM6886508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM6919905,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor19,Donor19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,28463,counts,pixel,3.9634956438888134,platform_constant,True,H&E,3.9634956438888134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919905,,,val,hesrt,samples/GSE222322/GSM6919905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919906,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor19,Donor19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4931,28463,counts,pixel,3.9634956438887956,platform_constant,True,H&E,3.9634956438887956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919906,,,val,hesrt,samples/GSE222322/GSM6919906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919907,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor19,Donor19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,28463,counts,pixel,3.923855315091428,platform_constant,True,H&E,3.923855315091428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919907,,,val,hesrt,samples/GSE222322/GSM6919907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919908,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor19,Donor19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4978,28463,counts,pixel,3.913938200789803,platform_constant,True,H&E,3.913938200789803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919908,,,val,hesrt,samples/GSE222322/GSM6919908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919909,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor43,Donor43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3431,36601,counts,pixel,3.924455548722752,platform_constant,True,H&E,3.924455548722752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-c49624f02479,cross_gse_redeposit,GSM9721741,val,hesrt,samples/GSE222322/GSM6919909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919910,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor43,Donor43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2977,36601,counts,pixel,3.8946180901981813,platform_constant,True,H&E,3.8946180901981813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-dfe0e3cdd7c3,cross_gse_redeposit,GSM9721742,val,hesrt,samples/GSE222322/GSM6919910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919911,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L5/S1),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor47,Donor47,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4914,36601,counts,pixel,3.892535042032913,platform_constant,True,H&E,3.892535042032913,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-6c11a221fa6c,cross_gse_redeposit,GSM9721743,val,hesrt,samples/GSE222322/GSM6919911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919912,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L5/S1),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor47,Donor47,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4058,36601,counts,pixel,3.9048611580319252,platform_constant,True,H&E,3.9048611580319252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-577b1aad8c1f,cross_gse_redeposit,GSM9721744,val,hesrt,samples/GSE222322/GSM6919912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919913,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor43,Donor43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3114,36601,counts,pixel,3.9144098074291405,platform_constant,True,H&E,3.9144098074291405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-fa4422e0fb1f,cross_gse_redeposit,GSM9721745,val,hesrt,samples/GSE222322/GSM6919913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919914,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor43,Donor43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3054,36601,counts,pixel,3.9199653708377475,platform_constant,True,H&E,3.9199653708377475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-039251b09952,cross_gse_redeposit,GSM9721746,val,hesrt,samples/GSE222322/GSM6919914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919915,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L5/S1),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor47,Donor47,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4542,36601,counts,pixel,3.898958119787397,platform_constant,True,H&E,3.898958119787397,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-c950f3260c3b,cross_gse_redeposit,GSM9721747,val,hesrt,samples/GSE222322/GSM6919915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919916,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L5/S1),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor47,Donor47,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4728,36601,counts,pixel,3.9048611580319252,platform_constant,True,H&E,3.9048611580319252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-391ee27e97b5,cross_gse_redeposit,GSM9721748,val,hesrt,samples/GSE222322/GSM6919916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919917,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor45,Donor45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4966,36601,counts,pixel,3.9112848747916584,platform_constant,True,H&E,3.9112848747916584,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-de2a0aa72219,cross_gse_redeposit,GSM9721749,val,hesrt,samples/GSE222322/GSM6919917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919918,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor45,Donor45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4844,36601,counts,pixel,3.9217013562799443,platform_constant,True,H&E,3.9217013562799443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-b785e5283726,cross_gse_redeposit,GSM9721750,val,hesrt,samples/GSE222322/GSM6919918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919919,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor45,Donor45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4768,36601,counts,pixel,3.892013646533197,platform_constant,True,H&E,3.892013646533197,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-0e3e5365de3d,cross_gse_redeposit,GSM9721751,val,hesrt,samples/GSE222322/GSM6919919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919920,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor45,Donor45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4642,36601,counts,pixel,3.905034582392694,platform_constant,True,H&E,3.905034582392694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-475dce7d54b2,cross_gse_redeposit,GSM9721752,val,hesrt,samples/GSE222322/GSM6919920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919921,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor43,Donor43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3200,36601,counts,pixel,3.9024512318765217,platform_constant,True,H&E,3.9024512318765217,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-db5acdd9bfd0,cross_gse_redeposit,GSM9721753,val,hesrt,samples/GSE222322/GSM6919921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919922,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L3/L4),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor43,Donor43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2959,36601,counts,pixel,3.9405299923498136,platform_constant,True,H&E,3.9405299923498136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-c6ade025cfda,cross_gse_redeposit,GSM9721754,val,hesrt,samples/GSE222322/GSM6919922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919923,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L5/S1),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor47,Donor47,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4823,36601,counts,pixel,3.922530393173198,platform_constant,True,H&E,3.922530393173198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-ac4940611c8c,cross_gse_redeposit,GSM9721755,val,hesrt,samples/GSE222322/GSM6919923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919924,GSE222322,GSE222322,Spatial transcriptomics on human lumbar spinal cord,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord (L5/S1),primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE222322:Donor47,Donor47,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4187,36601,counts,pixel,3.914891911293575,platform_constant,True,H&E,3.914891911293575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-e82cf7bb507e,cross_gse_redeposit,GSM9721756,val,hesrt,samples/GSE222322/GSM6919924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6921917,GSE222383,GSE222383,Developmental Deficits of MGE-derived Interneurons in the Cntnap2 Knockout Mouse Model of Autism Spectrum Disorder,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005260,autism,disease,mondo_predicate (Luna: perturbation),,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,74816,24901,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,36819097,,GSM6921917,,,train,sda-all,samples/GSE222383/GSM6921917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6922983,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1997,32285,counts,pixel,4.443007895463451,platform_constant,True,H&E,4.443007895463451,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922983,,,train,hesrt,samples/GSE222410/GSM6922983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922984,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2666,32285,counts,pixel,4.074536925170618,platform_constant,True,H&E,4.074536925170618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922984,,,train,hesrt,samples/GSE222410/GSM6922984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922985,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2694,32285,counts,pixel,4.074536925170618,platform_constant,True,H&E,4.074536925170618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922985,,,train,hesrt,samples/GSE222410/GSM6922985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6922986,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2711,32285,counts,pixel,4.441898135222222,platform_constant,True,H&E,4.441898135222222,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922986,,,train,hesrt,samples/GSE222410/GSM6922986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922987,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2631,32285,counts,pixel,4.074536925170618,platform_constant,True,H&E,4.074536925170618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922987,,,train,hesrt,samples/GSE222410/GSM6922987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922988,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2494,32285,counts,pixel,4.074536925170627,platform_constant,True,H&E,4.074536925170627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922988,,,train,hesrt,samples/GSE222410/GSM6922988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922989,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2997,32285,counts,pixel,4.043981449331831,platform_constant,True,H&E,4.043981449331831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922989,,,train,hesrt,samples/GSE222410/GSM6922989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6922990,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2306,32285,counts,pixel,4.041203840199422,platform_constant,True,H&E,4.041203840199422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922990,,,train,hesrt,samples/GSE222410/GSM6922990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922991,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1967,32285,counts,pixel,4.073148003144079,platform_constant,True,H&E,4.073148003144079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922991,,,train,hesrt,samples/GSE222410/GSM6922991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922992,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2072,32285,counts,pixel,4.062514286566326,platform_constant,True,H&E,4.062514286566326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922992,,,train,hesrt,samples/GSE222410/GSM6922992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922993,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3103,32285,counts,pixel,4.037337976095643,platform_constant,True,H&E,4.037337976095643,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922993,,,train,hesrt,samples/GSE222410/GSM6922993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922994,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2378,32285,counts,pixel,4.062514286566326,platform_constant,True,H&E,4.062514286566326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922994,,,train,hesrt,samples/GSE222410/GSM6922994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6922995,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2958,32285,counts,pixel,4.043357821894079,platform_constant,True,H&E,4.043357821894079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922995,,,train,hesrt,samples/GSE222410/GSM6922995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922996,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2085,32285,counts,pixel,4.072453628485474,platform_constant,True,H&E,4.072453628485474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922996,,,train,hesrt,samples/GSE222410/GSM6922996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6922997,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1736,32285,counts,pixel,4.044978598427247,platform_constant,True,H&E,4.044978598427247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922997,,,train,hesrt,samples/GSE222410/GSM6922997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922998,GSE222410,GSE222410,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,sleep deprived,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2634,32285,counts,pixel,4.071990700297742,platform_constant,True,H&E,4.071990700297742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922998,,,train,hesrt,samples/GSE222410/GSM6922998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6937699,GSE222981,GSE222981,Moxibustion Improves Hypothalamus Aqp4 Polarization in APP/PS1 Mice: Evidence from Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2903,31053,counts,pixel,0.273224043715847,platform_constant,True,H&E,0.5000107993693169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36819717,10.3389/fnagi.2023.1069155,GSM6937699,,,train,hesrt,samples/GSE222981/GSM6937699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6937700,GSE222981,GSE222981,Moxibustion Improves Hypothalamus Aqp4 Polarization in APP/PS1 Mice: Evidence from Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP/PS1,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3023,31053,counts,pixel,0.273224043715847,platform_constant,True,H&E,0.4999972070120755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36819717,10.3389/fnagi.2023.1069155,GSM6937700,,,train,hesrt,samples/GSE222981/GSM6937700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6937701,GSE222981,GSE222981,Moxibustion Improves Hypothalamus Aqp4 Polarization in APP/PS1 Mice: Evidence from Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP/PS1+MOX,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2962,31053,counts,pixel,0.273224043715847,platform_constant,True,H&E,0.49999657184386814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36819717,10.3389/fnagi.2023.1069155,GSM6937701,,,train,hesrt,samples/GSE222981/GSM6937701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938326,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,4 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,308,28349,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938326,,,train,sda-all,samples/GSE223020/GSM6938326,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6938327,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,4 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,369,29082,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938327,,,train,sda-all,samples/GSE223020/GSM6938327,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6938328,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,4 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,443,25763,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938328,,,train,sda-all,samples/GSE223020/GSM6938328,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6938329,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,4 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,369,31115,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938329,,,train,sda-all,samples/GSE223020/GSM6938329,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM6938330,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,4 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,431,31584,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938330,,,train,sda-all,samples/GSE223020/GSM6938330,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6938331,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,336,1251,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938331,,,train,sda-all,samples/GSE223020/GSM6938331,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938332,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,332,1750,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938332,,,train,sda-all,samples/GSE223020/GSM6938332,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6938333,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,335,1064,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938333,,,train,sda-all,samples/GSE223020/GSM6938333,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938334,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,347,885,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938334,,,train,sda-all,samples/GSE223020/GSM6938334,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938335,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,317,784,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938335,,,train,sda-all,samples/GSE223020/GSM6938335,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6938336,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,346,2400,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938336,,,train,sda-all,samples/GSE223020/GSM6938336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6938337,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,346,1045,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938337,,,train,sda-all,samples/GSE223020/GSM6938337,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938338,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,324,2258,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938338,,,train,sda-all,samples/GSE223020/GSM6938338,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6938339,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,331,2058,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938339,,,train,sda-all,samples/GSE223020/GSM6938339,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6938340,GSE223020,GSE223020,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Cerebral organoid,organoid,,,normal,luna,,Cerebral organoid differentiation,not stated,rule: culture or organoid (culture time is not a life stage),not stated,9 months,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,1643,17808,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,37751695,,GSM6938340,,,train,sda-all,samples/GSE223020/GSM6938340,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6939154,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2547,32285,counts,pixel,4.073457798139227,platform_constant,True,H&E,4.073457798139227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939154,,,train,hesrt,samples/GSE223066/GSM6939154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939155,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2906,32285,counts,pixel,4.044978598427247,platform_constant,True,H&E,4.044978598427247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939155,,,train,hesrt,samples/GSE223066/GSM6939155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939156,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2176,32285,counts,pixel,4.04428407312448,platform_constant,True,H&E,4.04428407312448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939156,,,train,hesrt,samples/GSE223066/GSM6939156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939157,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,spatial object recognition training,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2349,32285,counts,pixel,4.061162751751127,platform_constant,True,H&E,4.061162751751127,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939157,,,train,hesrt,samples/GSE223066/GSM6939157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939158,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2744,32285,counts,pixel,4.0543355901559135,platform_constant,True,H&E,4.0543355901559135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939158,,,train,hesrt,samples/GSE223066/GSM6939158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6939159,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2593,32285,counts,pixel,4.061162751751108,platform_constant,True,H&E,4.061162751751108,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939159,,,train,hesrt,samples/GSE223066/GSM6939159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6939160,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3065,32285,counts,pixel,4.061860370596781,platform_constant,True,H&E,4.061860370596781,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939160,,,train,hesrt,samples/GSE223066/GSM6939160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6939161,GSE223066,GSE223066,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,home cage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2880,32285,counts,pixel,4.062790665375223,platform_constant,True,H&E,4.062790665375223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939161,,,train,hesrt,samples/GSE223066/GSM6939161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6957676,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:PA019,PA019,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,52434,30286,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957676,,,train,sda-all,samples/GSE223501/GSM6957676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6957677,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:PA025,PA025,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,50129,27101,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957677,,,train,sda-all,samples/GSE223501/GSM6957677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957678,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:PA054,PA054,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,57687,29682,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957678,,,train,sda-all,samples/GSE223501/GSM6957678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6957680,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:N254,N254,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,54416,28945,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957680,,,train,sda-all,samples/GSE223501/GSM6957680,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957681,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:N586,N586,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,44415,28424,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957681,,,train,sda-all,samples/GSE223501/GSM6957681,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957682,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:STK_14,STK_14,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,59561,28210,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957682,,,train,sda-all,samples/GSE223501/GSM6957682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6957683,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:STK_18,STK_18,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,59786,30509,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957683,,,train,sda-all,samples/GSE223501/GSM6957683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6957684,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:STK_15,STK_15,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,55673,29801,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957684,,,train,sda-all,samples/GSE223501/GSM6957684,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6957685,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:STK_20,STK_20,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,54002,28764,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957685,,,train,sda-all,samples/GSE223501/GSM6957685,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957686,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:STK22dot2,STK22dot2,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,55821,28689,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957686,,,train,sda-all,samples/GSE223501/GSM6957686,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957687,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:KRAS_10,KRAS_10,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,42319,28607,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957687,,,train,sda-all,samples/GSE223501/GSM6957687,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6957689,GSE223501+GSE223503,GSE223501,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE223501:KRAS_12,KRAS_12,,,Slide-seq,release v3,Slide-seq,sequencing-based,slideseq,,,bead,49445,28512,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40016452,,GSM6957689,,,train,sda-all,samples/GSE223501/GSM6957689,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963115,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,APAP liver explant,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2650,33538,counts,pixel,0.8849557522123894,platform_constant,True,H&E,0.8849557522123894,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963115,,,train,hesrt,samples/GSE223559/GSM6963115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6963116,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,APAP liver explant,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2910,33538,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963116,,,train,hesrt,samples/GSE223559/GSM6963116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6963117,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,APAP liver explant,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1776,33538,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963117,,,train,hesrt,samples/GSE223559/GSM6963117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963119,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Healthy liver explant,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1969,33538,counts,pixel,0.9090909090909091,platform_constant,True,H&E,0.9090909090909091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963119,,,train,hesrt,samples/GSE223559/GSM6963119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963120,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Healthy liver explant,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4350,33538,counts,pixel,0.8771592358278378,platform_constant,True,H&E,0.8771592358278378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963120,,,train,hesrt,samples/GSE223559/GSM6963120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963121,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Healthy liver explant,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2618,33538,counts,pixel,0.8771592358278378,platform_constant,True,H&E,0.8771592358278378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963121,,,train,hesrt,samples/GSE223559/GSM6963121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6963122,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,NonAE liver explant,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2462,33538,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963122,,,train,hesrt,samples/GSE223559/GSM6963122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963123,GSE223559,GSE223559,Multimodal decoding of human liver regeneration [st_human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,NonAE liver explant,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3645,33538,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963123,,,train,hesrt,samples/GSE223559/GSM6963123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963514,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Uninjured,0h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1951,31053,counts,pixel,0.8849211017394925,platform_constant,True,H&E,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963514,,,test,hesrt,samples/GSE223560/GSM6963514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6963515,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Uninjured,0h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2730,31053,counts,pixel,0.8849211017394925,platform_constant,True,H&E,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963515,,,test,hesrt,samples/GSE223560/GSM6963515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6963517,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Uninjured,0h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2432,31053,counts,pixel,0.9266809891468585,platform_constant,True,H&E,0.9266809891468585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963517,,,test,hesrt,samples/GSE223560/GSM6963517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6963518,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,24h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2521,31053,counts,pixel,0.8622612271184538,platform_constant,True,H&E,0.8622612271184538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963518,,,test,hesrt,samples/GSE223560/GSM6963518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963519,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,24h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1649,31053,counts,pixel,0.847457627118644,platform_constant,True,H&E,0.847457627118644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963519,,,test,hesrt,samples/GSE223560/GSM6963519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963520,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,36h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1971,31053,counts,pixel,0.8333043996551018,platform_constant,True,H&E,0.8333043996551018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963520,,,test,hesrt,samples/GSE223560/GSM6963520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963521,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,36h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2036,31053,counts,pixel,0.8333043996551018,platform_constant,True,H&E,0.8333043996551018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963521,,,test,hesrt,samples/GSE223560/GSM6963521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963523,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,48h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3478,31053,counts,pixel,0.8558269432718281,platform_constant,True,H&E,0.8558269432718281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963523,,,test,hesrt,samples/GSE223560/GSM6963523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963524,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,48h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1491,31053,counts,pixel,0.8558269432718281,platform_constant,True,H&E,0.8558269432718281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963524,,,test,hesrt,samples/GSE223560/GSM6963524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM6963525,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,48h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2632,31053,counts,pixel,0.869532343443978,platform_constant,True,H&E,0.869532343443978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963525,,,test,hesrt,samples/GSE223560/GSM6963525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963526,GSE223560,GSE223560,Multimodal decoding of human liver regeneration [st_mouse],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,mondo_predicate (Luna: perturbation),POD,48h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2432,31053,counts,pixel,0.8771592358278378,platform_constant,True,H&E,0.8771592358278378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963526,,,test,hesrt,samples/GSE223560/GSM6963526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6996258,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001385,tibialis anterior,Tibialis Anterior (TA),primary tissue,,,perturbation,luna,,CTX muscle injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,770,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.083738577202159,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,other,one tissue region has no spots; spots that exist are aligned,39190487,,GSM6996258,,,train,sda-all,samples/GSE223813/GSM6996258,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6996259,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001385,tibialis anterior,Tibialis Anterior (TA),primary tissue,,,perturbation,luna,,CTX muscle injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1273,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9754316952245508,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996259,,,train,sda-all,samples/GSE223813/GSM6996259,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6996260,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001385,tibialis anterior,Tibialis Anterior (TA),primary tissue,,,perturbation,luna,,CTX muscle injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1567,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.98248728954654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996260,,,train,sda-all,samples/GSE223813/GSM6996260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6996261,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius muscle (GAST),primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,vehicle,adult,age rule: age with unit,juvenile,2 month old,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,856,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.634693311657189,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,39190487,,GSM6996261,,,train,sda-all,samples/GSE223813/GSM6996261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM6996262,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius muscle (GAST),primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,vehicle,adult,age rule: age with unit,juvenile,2 month old,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,653,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.524590407932672,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,"poor, dark staining; registration is correct",39190487,,GSM6996262,,,train,sda-all,samples/GSE223813/GSM6996262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM6996263,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius muscle (GAST),primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,prednisone,adult,age rule: age with unit,juvenile,2 month old,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1589,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9700956430369816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996263,,,train,sda-all,samples/GSE223813/GSM6996263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM6996264,GSE223813,GSE223813,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius muscle (GAST),primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,prednisone,adult,age rule: age with unit,juvenile,2 month old,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,814,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9900038725014104,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996264,,,train,sda-all,samples/GSE223813/GSM6996264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM7017457,GSE224210,GSE224210,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,chronic lung allograft dysfunction,CLAD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2630,36601,counts,pixel,0.7352742413412813,platform_constant,True,H&E,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017457,,,train,hesrt,samples/GSE224210/GSM7017457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7017458,GSE224210,GSE224210,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,chronic lung allograft dysfunction,CLAD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2395,36601,counts,pixel,0.7352742413412813,platform_constant,True,H&E,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017458,,,train,hesrt,samples/GSE224210/GSM7017458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7017459,GSE224210,GSE224210,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,chronic lung allograft dysfunction,CLAD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2524,36601,counts,pixel,0.7352742413412813,platform_constant,True,H&E,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017459,,,train,hesrt,samples/GSE224210/GSM7017459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7017460,GSE224210,GSE224210,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1008,36601,counts,pixel,0.7352742413412813,platform_constant,True,H&E,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017460,,,train,hesrt,samples/GSE224210/GSM7017460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7019835,GSE224336,GSE224336,Targeting PDGF signaling of cancer-associated fibroblasts blocks feedback activation of HIF-1α and overcomes chemoresistance in ovarian clear cell carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,OCCC tumor,tumour tissue,MONDO:0004993,carcinoma,disease,luna,ovarian clear cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1514,36601,counts,pixel,4.365521763857298,platform_constant,True,H&E,4.365521763857298,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670097,,GSM7019835,,,train,hesrt,samples/GSE224336/GSM7019835,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7019836,GSE224336,GSE224336,Targeting PDGF signaling of cancer-associated fibroblasts blocks feedback activation of HIF-1α and overcomes chemoresistance in ovarian clear cell carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,OCCC tumor,tumour tissue,MONDO:0004993,carcinoma,disease,luna,ovarian clear cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,898,36601,counts,pixel,4.36437660500443,platform_constant,True,H&E,4.36437660500443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670097,,GSM7019836,,,train,hesrt,samples/GSE224336/GSM7019836,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7020543,GSE224360,GSE224360,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Virgin,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2540,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.837231009198858,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020543,,,train,sda-all,samples/GSE224360/GSM7020543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7020544,GSE224360,GSE224360,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Perinatal care,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2123,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.838381486871975,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020544,,,train,sda-all,samples/GSE224360/GSM7020544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7020545,GSE224360,GSE224360,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Virgin,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2369,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.838073450070576,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020545,,,train,sda-all,samples/GSE224360/GSM7020545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7020546,GSE224360,GSE224360,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Peri-weaning,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2648,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.846463807285455,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020546,,,train,sda-all,samples/GSE224360/GSM7020546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7021870,GSE224411,GSE224411,Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,HCC,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3006,36601,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37080163;37591207,,CG-3a37787710c1,cross_gse_redeposit,GSM7661255,test,hesrt,samples/GSE224411/GSM7021870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7021871,GSE224411,GSE224411,Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PanIN,tumour tissue,MONDO:0005070,neoplasm,disease,luna,pancreatic intraepithelial neoplasia,naïve,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1872,17943,counts,pixel,0.9109750373485539,platform_constant,True,H&E,0.9109750373485539,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37080163;37591207,,CG-4cfe023cac15,cross_gse_redeposit,GSM8058247,test,hesrt,samples/GSE224411/GSM7021871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7021872,GSE224411,GSE224411,Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,PDAClymphnode,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,GVAX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1351,36601,counts,pixel,2.0,platform_constant,True,H&E,2.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37080163;37591207,,CG-668d5271dc68,cross_gse_redeposit,GSM8514556,test,hesrt,samples/GSE224411/GSM7021872,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.96, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7024964,GSE224477+GSE224478,GSE224477,ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211,brain neoplasm,disease,luna,ETMR,,adult,age rule: bare number read as years,adult,28,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,848,17943,counts,pixel,4.087409558325102,platform_constant,True,H&E,4.087409558325102,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40562749,,GSM7024964,,,test,hesrt,samples/GSE224477/GSM7024964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7024965,GSE224477+GSE224478,GSE224477,ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211,brain neoplasm,disease,luna,ETMR,,adult,age rule: bare number read as years,adult,48,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3814,17943,counts,pixel,4.079077077888968,platform_constant,True,H&E,4.079077077888968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40562749,,GSM7024965,,,test,hesrt,samples/GSE224477/GSM7024965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7024966,GSE224477+GSE224478,GSE224477,ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211,brain neoplasm,disease,luna,ETMR,,juvenile,age rule: bare number read as years,juvenile,12,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2668,17943,counts,pixel,4.061430328139184,platform_constant,True,H&E,4.061430328139184,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40562749,,GSM7024966,,,test,hesrt,samples/GSE224477/GSM7024966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7049132,GSE225475,GSE225475,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,healthy,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1340,33538,counts,um,1.0,verified,True,H&E,3.9260237809235035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049132,,,val,sda-all,samples/GSE225475/GSM7049132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7049133,GSE225475,GSE225475,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,healthy,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,904,33538,counts,um,1.0,verified,True,H&E,3.9623764012166793,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049133,,,val,sda-all,samples/GSE225475/GSM7049133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7049134,GSE225475,GSE225475,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005083,psoriasis,disease,luna,psoriasis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1352,33538,counts,um,1.0,verified,True,H&E,3.91581316467385,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049134,,,val,sda-all,samples/GSE225475/GSM7049134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7049135,GSE225475,GSE225475,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005083,psoriasis,disease,luna,psoriasis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1393,33538,counts,um,1.0,verified,True,H&E,4.838102889283527,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049135,,,val,sda-all,samples/GSE225475/GSM7049135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7049136,GSE225475,GSE225475,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005083,psoriasis,disease,luna,psoriasis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1463,33538,counts,um,1.0,verified,True,H&E,4.749533780829714,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049136,,,val,sda-all,samples/GSE225475/GSM7049136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM7049137,GSE225475,GSE225475,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005083,psoriasis,disease,luna,psoriasis,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1118,17943,counts,um,1.0,verified,True,H&E,4.066888529168035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049137,,,val,sda-all,samples/GSE225475/GSM7049137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7054270,GSE225690+GSE225691,GSE225690,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,metastasis biopsies,metastasis,MONDO:0011962,endometrial cancer,disease,luna,endometrial carcinoma,At inclusion,not stated,luna,not stated,,unknown,not stated,,GSE225690:01-034,01-034,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,539,17943,counts,pixel,4.367105132057389,platform_constant,True,H&E,4.367105132057389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054270,,,train,hesrt,samples/GSE225690/GSM7054270,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7054271,GSE225690+GSE225691,GSE225690,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,metastasis biopsies,metastasis,MONDO:0011962,endometrial cancer,disease,luna,endometrial carcinoma,After one month of treatment,not stated,luna,not stated,,unknown,not stated,,GSE225690:01-034,01-034,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,755,17943,counts,pixel,3.9723685223480274,platform_constant,True,H&E,3.9723685223480274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054271,,,train,hesrt,samples/GSE225690/GSM7054271,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7054272,GSE225690+GSE225691,GSE225690,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,metastasis biopsies,metastasis,MONDO:0011962,endometrial cancer,disease,luna,endometrial carcinoma,At inclusion,not stated,luna,not stated,,unknown,not stated,,GSE225690:01-039,01-039,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1091,17943,counts,pixel,3.968420893894744,platform_constant,True,H&E,3.968420893894744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054272,,,train,hesrt,samples/GSE225690/GSM7054272,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7054273,GSE225690+GSE225691,GSE225690,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,metastasis biopsies,metastasis,MONDO:0011962,endometrial cancer,disease,luna,endometrial carcinoma,After one month of treatment,not stated,luna,not stated,,unknown,not stated,,GSE225690:01-039,01-039,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2141,17943,counts,pixel,3.957894838164209,platform_constant,True,H&E,3.957894838164209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054273,,,train,hesrt,samples/GSE225690/GSM7054273,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7055901,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1493,31053,counts,pixel,4.259523561513061,platform_constant,True,H&E,4.259523561513061,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055901,,,test,hesrt,samples/GSE225766/GSM7055901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055902,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1438,31053,counts,pixel,4.258163241396546,platform_constant,True,H&E,4.258163241396546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055902,,,test,hesrt,samples/GSE225766/GSM7055902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055903,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,MDX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1064,31053,counts,pixel,4.2578228973706835,platform_constant,True,H&E,4.2578228973706835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055903,,,test,hesrt,samples/GSE225766/GSM7055903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055904,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,MDX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,959,31053,counts,pixel,4.254421648817894,platform_constant,True,H&E,4.254421648817894,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055904,,,test,hesrt,samples/GSE225766/GSM7055904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055905,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1497,31053,counts,pixel,4.277171377374568,platform_constant,True,H&E,4.277171377374568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055905,,,test,hesrt,samples/GSE225766/GSM7055905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055906,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,MDX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,826,31053,counts,pixel,4.258421739868129,platform_constant,True,H&E,4.258421739868129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055906,,,test,hesrt,samples/GSE225766/GSM7055906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055907,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,MDX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1155,31053,counts,pixel,4.260448811738785,platform_constant,True,H&E,4.260448811738785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055907,,,test,hesrt,samples/GSE225766/GSM7055907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055908,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,MDX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1136,31053,counts,pixel,4.2582524480561075,platform_constant,True,H&E,4.2582524480561075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055908,,,test,hesrt,samples/GSE225766/GSM7055908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7230943,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,,,perturbation,luna,,cardiotoxin,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2516,31053,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37410813,,GSM7230943,,,test,sda-all,samples/GSE225766/GSM7230943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7230944,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,,,perturbation,luna,,WT Day3 PostInjury cardiotoxin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1854,31053,counts,pixel,4.171629121686752,platform_constant,True,H&E,4.171629121686752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7230944,,,test,hesrt,samples/GSE225766/GSM7230944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7230945,GSE225766,GSE225766,A cellular and molecular spatial atlas of dystrophic muscle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001388,gastrocnemius,Gastrocnemius,primary tissue,,,perturbation,luna,,WT Day5 PostInjury cardiotoxin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2285,31053,counts,pixel,4.164466619102457,platform_constant,True,H&E,4.164466619102457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7230945,,,test,hesrt,samples/GSE225766/GSM7230945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7058756,GSE225857,GSE225857,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colorectal tissue,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,primary tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2054,17943,counts,pixel,3.87828282087531,platform_constant,True,H&E,3.87828282087531,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058756,,,train,hesrt,samples/GSE225857/GSM7058756,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7058757,GSE225857,GSE225857,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colorectal tissue,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,primary tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3305,17943,counts,pixel,3.8917839483804144,platform_constant,True,H&E,3.8917839483804144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058757,,,train,hesrt,samples/GSE225857/GSM7058757,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7058758,GSE225857,GSE225857,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colorectal tissue,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,primary tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3417,17943,counts,pixel,3.868939749552994,platform_constant,True,H&E,3.868939749552994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058758,,,train,hesrt,samples/GSE225857/GSM7058758,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM7058759,GSE225857,GSE225857,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colorectal tissue,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,primary tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4016,17943,counts,pixel,3.919142220869314,platform_constant,True,H&E,3.919142220869314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058759,,,train,hesrt,samples/GSE225857/GSM7058759,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7058760,GSE225857,GSE225857,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver tissue,metastasis,MONDO:0005575;MONDO:0024883,colorectal cancer;metastatic neoplasm,disease,luna,colorectal cancer,liver metastatic tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4672,17943,counts,pixel,3.911818904165685,platform_constant,True,H&E,3.911818904165685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058760,,,train,hesrt,samples/GSE225857/GSM7058760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7058761,GSE225857,GSE225857,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver tissue,metastasis,MONDO:0005575;MONDO:0024883,colorectal cancer;metastatic neoplasm,disease,luna,colorectal cancer,liver metastatic tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4796,17943,counts,pixel,3.9610606329024867,platform_constant,True,H&E,3.9610606329024867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058761,,,train,hesrt,samples/GSE225857/GSM7058761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM7063747,GSE226097,GSE226097,A Single-Nucleus Atlas of Seed-to-Seed Development in Arabidopsis,Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,Germinating seeds,primary tissue,,,normal,luna,,,not stated,luna,not stated,1.25-days-old,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,55290,19502,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40830271,,GSM7063747,,,test,sda-all,samples/GSE226097/GSM7063747,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.21}",life_stage,low_confidence_annotation
GSM7068162,GSE226208+GSE226211,GSE226208,"Shared inflammatory glial cell signature after brain injury, revealed by spatial, temporal and cell-type-specific profiling of the murine cerebral cortex [spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,w/o treatment,adult,age rule: age with unit,adult,8-12 weeks old,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1991,27998,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.950544419410055,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,38570482;39179527,,GSM7068162,,,train,sda-all,samples/GSE226208/GSM7068162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7068163,GSE226208+GSE226211,GSE226208,"Shared inflammatory glial cell signature after brain injury, revealed by spatial, temporal and cell-type-specific profiling of the murine cerebral cortex [spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0044745,nervous system injury,disease,mondo_predicate (Luna: perturbation),,2days DMSO,adult,age rule: age with unit,adult,8-12 weeks old,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1740,27998,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.9543550332093544,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,38570482;39179527,,GSM7068163,,,train,sda-all,samples/GSE226208/GSM7068163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7979963,GSE226430,GSE226430,Spatiotemporal understanding of healthy and disordered early pregnancy governed by immune-featured stromal cells,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0001295,endometrium,Endometrium,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,20472,23427,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37699390,,GSM7979963,,,train,sda-all,samples/GSE226430/GSM7979963,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7979964,GSE226430,GSE226430,Spatiotemporal understanding of healthy and disordered early pregnancy governed by immune-featured stromal cells,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0001295,endometrium,Endometrium,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,22355,23330,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37699390,,GSM7979964,,,train,sda-all,samples/GSE226430/GSM7979964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7979965,GSE226430,GSE226430,Spatiotemporal understanding of healthy and disordered early pregnancy governed by immune-featured stromal cells,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0001295,endometrium,Endometrium,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,26212,23373,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37699390,,GSM7979965,,,train,sda-all,samples/GSE226430/GSM7979965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7078497,GSE226533,GSE226533,Human and Murine Kidneys Contain Transcriptionally and Spatially Orthologous Resident Macrophage Subpopulations in Acute Kidney Injury,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4237,36601,counts,pixel,4.385366059770765,platform_constant,True,H&E,4.385366059770765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7078497,,,train,hesrt,samples/GSE226533/GSM7078497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7078498,GSE226533,GSE226533,Human and Murine Kidneys Contain Transcriptionally and Spatially Orthologous Resident Macrophage Subpopulations in Acute Kidney Injury,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4059,36601,counts,pixel,4.357420540094862,platform_constant,True,H&E,4.357420540094862,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7078498,,,train,hesrt,samples/GSE226533/GSM7078498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7081216,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,,,normal,luna,Control,Control,aged,age rule: age in years,aged,75 years,female,extracted field,female,GSE226663:144105,144105,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3529,33538,counts,pixel,4.784962347064312,platform_constant,True,H&E,4.784962347064312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081216,,,train,hesrt,samples/GSE226663/GSM7081216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081217,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,,,normal,luna,Control,Control,aged,age rule: age in years,aged,75 years,female,extracted field,female,GSE226663:144106,144106,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2673,33538,counts,pixel,4.339473492904843,platform_constant,True,H&E,4.339473492904843,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081217,,,train,hesrt,samples/GSE226663/GSM7081217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081218,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,,,normal,luna,Control,Control,aged,age rule: age in years,aged,82 years,male,extracted field,male,GSE226663:144107,144107,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3277,33538,counts,pixel,4.802276458685329,platform_constant,True,H&E,4.802276458685329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081218,,,train,hesrt,samples/GSE226663/GSM7081218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081219,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,,,normal,luna,Control,Control,aged,age rule: age in years,aged,82 years,male,extracted field,male,GSE226663:144108,144108,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3158,33538,counts,pixel,4.8011453208731245,platform_constant,True,H&E,4.8011453208731245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081219,,,train,hesrt,samples/GSE226663/GSM7081219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7081220,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's Disease (AD),Alzheimer's Disease (AD),aged,age rule: age in years,aged,83 years,male,extracted field,male,GSE226663:144111,144111,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3083,33538,counts,pixel,4.830445125300169,platform_constant,True,H&E,4.830445125300169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081220,,,train,hesrt,samples/GSE226663/GSM7081220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7081221,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's Disease (AD),Alzheimer's Disease (AD),aged,age rule: age in years,aged,83 years,male,extracted field,male,GSE226663:144112,144112,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2850,33538,counts,pixel,4.830445125300168,platform_constant,True,H&E,4.830445125300168,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081221,,,train,hesrt,samples/GSE226663/GSM7081221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7081222,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's Disease (PD),Parkinson's Disease (PD),aged,age rule: age in years,aged,71 years,female,extracted field,female,GSE226663:144113,144113,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2959,33538,counts,pixel,4.830445125300169,platform_constant,True,H&E,4.830445125300169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081222,,,train,hesrt,samples/GSE226663/GSM7081222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081223,GSE226663,GSE226663,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,middle temporal gyrus,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's Disease (PD),Parkinson's Disease (PD),aged,age rule: age in years,aged,71 years,female,extracted field,female,GSE226663:144114,144114,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2729,33538,counts,pixel,4.831583859652133,platform_constant,True,H&E,4.831583859652133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081223,,,train,hesrt,samples/GSE226663/GSM7081223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7267862,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,395,19465,counts,pixel,4.276037737834728,platform_constant,True,H&E,4.276037737834728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267862,,,train,hesrt,samples/GSE226760/GSM7267862,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.54, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7267863,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,598,19465,counts,pixel,4.047007160519825,platform_constant,True,H&E,4.047007160519825,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267863,,,train,hesrt,samples/GSE226760/GSM7267863,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7267864,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,354,19465,counts,pixel,4.276160043713187,platform_constant,True,H&E,4.276160043713187,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267864,,,train,hesrt,samples/GSE226760/GSM7267864,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7267865,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,406,19465,counts,pixel,4.276037737834718,platform_constant,True,H&E,4.276037737834718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267865,,,train,hesrt,samples/GSE226760/GSM7267865,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.28, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7267866,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,Bleomycin,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,663,19465,counts,pixel,4.276037737834728,platform_constant,True,H&E,4.276037737834728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267866,,,train,hesrt,samples/GSE226760/GSM7267866,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.64, ""life_stage"": 0.99}",,
GSM7267867,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,Bleomycin,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,552,19465,counts,pixel,4.276037737834718,platform_constant,True,H&E,4.276037737834718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267867,,,train,hesrt,samples/GSE226760/GSM7267867,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.58, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM7267869,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005093;MONDO:0019340,skin disorder;scleroderma,disease,mondo_predicate (Luna: perturbation),,Celastrol,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,526,19465,counts,pixel,4.276160043713187,platform_constant,True,H&E,4.276160043713187,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267869,,,train,hesrt,samples/GSE226760/GSM7267869,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.56, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7267870,GSE226760,GSE226760,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,mondo_predicate (Luna: perturbation),,Celastrol,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,624,19465,counts,pixel,4.276037737834728,platform_constant,True,H&E,4.276037737834728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267870,,,train,hesrt,samples/GSE226760/GSM7267870,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.42, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7089855,GSE226997,GSE226997,Visium Spatial transcriptomics analysis of human primary colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Human colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,Primary colorectal cancer,Primary colorectal cancer,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4148,17944,counts,pixel,4.026068950839756,platform_constant,True,H&E,4.026068950839756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089855,,,train,hesrt,samples/GSE226997/GSM7089855,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM7089856,GSE226997,GSE226997,Visium Spatial transcriptomics analysis of human primary colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Human colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,Primary colorectal cancer,Primary colorectal cancer,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3737,17944,counts,pixel,4.071724246666997,platform_constant,True,H&E,4.071724246666997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089856,,,train,hesrt,samples/GSE226997/GSM7089856,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7089857,GSE226997,GSE226997,Visium Spatial transcriptomics analysis of human primary colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Human colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,Primary colorectal cancer,Primary colorectal cancer,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4676,19144,counts,pixel,4.0490276487619745,platform_constant,True,H&E,4.0490276487619745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089857,,,train,hesrt,samples/GSE226997/GSM7089857,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7089858,GSE226997,GSE226997,Visium Spatial transcriptomics analysis of human primary colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Human colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,Primary colorectal cancer,Primary colorectal cancer,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3535,17944,counts,pixel,4.016002226104998,platform_constant,True,H&E,4.016002226104998,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089858,,,train,hesrt,samples/GSE226997/GSM7089858,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM7090083,GSE227019,GSE227019,Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,Ovarian cancer,,not stated,luna,not stated,,unknown,not stated,,GSE227019:1,1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2770,17943,counts,pixel,4.1388924126463404,platform_constant,True,H&E,4.1388924126463404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36882687,,SS-GSM7090083,same_section_within_series,GSM7090086,test,hesrt,samples/GSE227019/GSM7090083,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7090084,GSE227019,GSE227019,Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,Ovarian cancer,,not stated,luna,not stated,,unknown,not stated,,GSE227019:2,2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2558,17943,counts,pixel,4.004723189697145,platform_constant,True,H&E,4.004723189697145,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36882687,,SS-GSM7090084,same_section_within_series,GSM7090087,test,hesrt,samples/GSE227019/GSM7090084,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7090085,GSE227019,GSE227019,Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,Ovarian cancer,,not stated,luna,not stated,,unknown,not stated,,GSE227019:3,3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1979,17943,counts,pixel,3.9759794277506737,platform_constant,True,H&E,3.9759794277506737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36882687,,SS-GSM7090085,same_section_within_series,GSM7090088,test,hesrt,samples/GSE227019/GSM7090085,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM7090410,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,C57BL/6,not stated,luna,not stated,,male,extracted field,male,,,,,Other,release v3,ISS (Cartana),imaging-based,ISS by Cartana,,,cell,85445,193,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090410,,,train,sda-all,samples/GSE227046/GSM7090410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7090411,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,C57BL/6,not stated,luna,not stated,,male,extracted field,male,,,,,Other,release v3,ISS (Cartana),imaging-based,ISS by Cartana,,,cell,121326,196,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090411,,,train,sda-all,samples/GSE227046/GSM7090411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7090412,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,C57BL/6,not stated,luna,not stated,,male,extracted field,male,,,,,Other,release v3,ISS (Cartana),imaging-based,ISS by Cartana,,,cell,99515,194,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090412,,,train,sda-all,samples/GSE227046/GSM7090412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7090413,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,C57BL/6,not stated,luna,not stated,,male,extracted field,male,,,,,Other,release v3,ISS (Cartana),imaging-based,ISS by Cartana,,,cell,106695,195,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090413,,,train,sda-all,samples/GSE227046/GSM7090413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7090414,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,C57BL/6,not stated,luna,not stated,,male,extracted field,male,,,,,Other,release v3,ISS (Cartana),imaging-based,ISS by Cartana,,,cell,127634,195,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090414,,,train,sda-all,samples/GSE227046/GSM7090414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7090415,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,C57BL/6,not stated,luna,not stated,,female,extracted field,female,,,,,Other,release v3,ISS (Cartana),imaging-based,ISS by Cartana,,,cell,94869,194,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090415,,,train,sda-all,samples/GSE227046/GSM7090415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7090416,GSE227046,GSE227046,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,sham,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1815,32285,counts,pixel,3.891970527368205,platform_constant,True,H&E,3.891970527368205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38360882,,GSM7090416,,,train,hesrt,samples/GSE227046/GSM7090416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7097913,GSE227332,GSE227332,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,C57BL/6,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2830,19465,counts,pixel,5.576050413152669,platform_constant,True,H&E,5.576050413152669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097913,,,test,hesrt,samples/GSE227332/GSM7097913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7097914,GSE227332,GSE227332,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,perturbation,luna,,Zfp148 fl/fl; Zfp281 fl/fl; Cd4-Cre+,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2447,19465,counts,pixel,6.473021612230517,platform_constant,True,H&E,6.473021612230517,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097914,,,test,hesrt,samples/GSE227332/GSM7097914,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7097915,GSE227332,GSE227332,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,C57BL/6,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2692,19465,counts,pixel,5.3170475002591004,platform_constant,True,H&E,5.3170475002591004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097915,,,test,hesrt,samples/GSE227332/GSM7097915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7097916,GSE227332,GSE227332,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,perturbation,luna,,Zfp148 fl/fl; Zfp281 fl/fl; Cd4-Cre+,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2452,19465,counts,pixel,4.969250279271878,platform_constant,True,H&E,4.969250279271878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097916,,,test,hesrt,samples/GSE227332/GSM7097916,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7097917,GSE227332,GSE227332,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,C57BL/6,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3189,19465,counts,pixel,6.47950289910507,platform_constant,True,H&E,6.47950289910507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097917,,,test,hesrt,samples/GSE227332/GSM7097917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7097918,GSE227332,GSE227332,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,perturbation,luna,,Zfp148 fl/fl; Zfp281 fl/fl; Cd4-Cre+,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2897,19465,counts,pixel,6.135943242569339,platform_constant,True,H&E,6.135943242569339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097918,,,test,hesrt,samples/GSE227332/GSM7097918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7103780,GSE227598,GSE227598,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,"Standard Diet, Control, day 43",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3052,32285,counts,pixel,4.066709065350866,platform_constant,True,H&E,4.066709065350866,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103780,,,train,hesrt,samples/GSE227598/GSM7103780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7103781,GSE227598,GSE227598,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,"Standard Diet, AOM-DSS, day 22",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4585,32285,counts,pixel,4.505404567841078,platform_constant,True,H&E,4.505404567841078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103781,,,train,hesrt,samples/GSE227598/GSM7103781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7103782,GSE227598,GSE227598,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,"Standard Diet, AOM-DSS, day 43",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4344,32285,counts,pixel,4.124714419033834,platform_constant,True,H&E,4.124714419033834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103782,,,train,hesrt,samples/GSE227598/GSM7103782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7103783,GSE227598,GSE227598,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,"GW3965 Diet, AOM-DSS, day 22",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3471,32285,counts,pixel,4.133000854332679,platform_constant,True,H&E,4.133000854332679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103783,,,train,hesrt,samples/GSE227598/GSM7103783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM7103784,GSE227598,GSE227598,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,"GW3965 Diet, AOM-DSS, day 43",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4291,32285,counts,pixel,4.294457666793719,platform_constant,True,H&E,4.294457666793719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103784,,,train,hesrt,samples/GSE227598/GSM7103784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM7106691,GSE227742,GSE227742,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,"GW3965 diet, non-irradiated (0 dpi) control",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4585,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,CG-b261b07f963b,cross_gse_redeposit,GSM8258691,train,hesrt,samples/GSE227742/GSM7106691,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7106692,GSE227742,GSE227742,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,perturbation,luna,,"GW3965 diet, irradiated (3 dpi)",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4881,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7106692,,,train,hesrt,samples/GSE227742/GSM7106692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7106693,GSE227742,GSE227742,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,"Standard diet, non-irradiated (0 dpi) control",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4190,32285,counts,pixel,4.148965623454898,platform_constant,True,H&E,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,CG-523382deca4d,cross_gse_redeposit,GSM8258690,train,hesrt,samples/GSE227742/GSM7106693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7106694,GSE227742,GSE227742,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,perturbation,luna,,"Standard diet, irradiated (3 dpi)",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4859,32285,counts,pixel,4.148965623454898,platform_constant,True,H&E,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7106694,,,train,hesrt,samples/GSE227742/GSM7106694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7113328,GSE228056,GSE228056,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,spleen,tumour tissue,MONDO:0019462,splenic marginal zone lymphoma,disease,luna,SMZL,SMZL,adult,age rule: age in years,adult,59 years,male,extracted field,male,GSE228056:SMZL1,SMZL1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,719,36601,counts,pixel,4.2632005210504476,platform_constant,True,H&E,4.2632005210504476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113328,,,train,hesrt,samples/GSE228056/GSM7113328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7113329,GSE228056,GSE228056,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,spleen,tumour tissue,MONDO:0019462,splenic marginal zone lymphoma,disease,luna,SMZL,SMZL,aged,age rule: age in years,aged,75 years,male,extracted field,male,GSE228056:SMZL2,SMZL2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1115,36601,counts,pixel,4.747947898172542,platform_constant,True,H&E,4.747947898172542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113329,,,train,hesrt,samples/GSE228056/GSM7113329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7113330,GSE228056,GSE228056,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,spleen,tumour tissue,MONDO:0019462,splenic marginal zone lymphoma,disease,luna,SMZL,SMZL,aged,age rule: age in years,aged,66 years,female,extracted field,female,GSE228056:SMZL3,SMZL3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2798,36601,counts,pixel,4.747947898172542,platform_constant,True,H&E,4.747947898172542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113330,,,train,hesrt,samples/GSE228056/GSM7113330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM7113331,GSE228056,GSE228056,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,healthy control,healthy control,not stated,luna,not stated,,male,extracted field,male,GSE228056:HD2,HD2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,806,36601,counts,pixel,4.747947898172529,platform_constant,True,H&E,4.747947898172529,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113331,,,train,hesrt,samples/GSE228056/GSM7113331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7115963,GSE228169,GSE228169,Human Cortical Kidney Sections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury,Acute Kidney Injury,not stated,luna,not stated,,male,extracted field,male,GSE228169:D1,D1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3555,36601,counts,pixel,4.384146291484138,platform_constant,True,H&E,4.384146291484138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,SS-GSM7115963,same_section_cross_series,GSM7757568,train,hesrt,samples/GSE228169/GSM7115963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7115964,GSE228169,GSE228169,Human Cortical Kidney Sections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002492,acute kidney injury,disease,luna,Acute Kidney Injury,Acute Kidney Injury,not stated,luna,not stated,,male,extracted field,male,GSE228169:D15,D15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3794,36601,counts,pixel,4.385366059770765,platform_constant,True,H&E,4.385366059770765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7115964,,,train,hesrt,samples/GSE228169/GSM7115964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7116321,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1wt/wt Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4198,32285,counts,pixel,4.1648386262367465,platform_constant,True,H&E,4.1648386262367465,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116321,,,val,hesrt,samples/GSE228195/GSM7116321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7116322,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1wt/wt Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4538,32285,counts,pixel,4.165116219508588,platform_constant,True,H&E,4.165116219508588,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116322,,,val,hesrt,samples/GSE228195/GSM7116322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7116323,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1wt/wt Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4579,32285,counts,pixel,4.163953573316747,platform_constant,True,H&E,4.163953573316747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116323,,,val,hesrt,samples/GSE228195/GSM7116323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7116324,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1wt/flox Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2737,32285,counts,pixel,4.16465115770981,platform_constant,True,H&E,4.16465115770981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116324,,,val,hesrt,samples/GSE228195/GSM7116324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7116325,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1wt/flox Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2928,32285,counts,pixel,4.163255849924016,platform_constant,True,H&E,4.163255849924016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116325,,,val,hesrt,samples/GSE228195/GSM7116325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7116326,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1wt/flox Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2868,32285,counts,pixel,4.163255849924016,platform_constant,True,H&E,4.163255849924016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116326,,,val,hesrt,samples/GSE228195/GSM7116326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM7116327,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1flox/flox Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2868,32285,counts,pixel,4.163488398406275,platform_constant,True,H&E,4.163488398406275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116327,,,val,hesrt,samples/GSE228195/GSM7116327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM7116328,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1flox/flox Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2736,32285,counts,pixel,4.165813820432265,platform_constant,True,H&E,4.165813820432265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116328,,,val,hesrt,samples/GSE228195/GSM7116328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM7116329,GSE228195,GSE228195,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Ifih1-/- Adar1flox/flox Alb-Cre+,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2741,32285,counts,pixel,4.163023327417954,platform_constant,True,H&E,4.163023327417954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116329,,,val,hesrt,samples/GSE228195/GSM7116329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM7119402,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,16,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2657,36601,counts,um,1.0,verified,True,fluorescence: yellow (heuristic),4.181740144984961,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119402,,,val,sda-all,samples/GSE228360/GSM7119402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119403,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,16,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1912,36601,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.184216030541901,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119403,,,val,sda-all,samples/GSE228360/GSM7119403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119404,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,16,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1893,36601,counts,um,1.0,verified,True,H&E,4.438319464902034,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119404,,,val,sda-all,samples/GSE228360/GSM7119404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119405,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,16,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2347,36601,counts,um,1.0,verified,True,H&E,4.176427243915216,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119405,,,val,sda-all,samples/GSE228360/GSM7119405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119406,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,13,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2357,36601,counts,um,1.0,verified,True,H&E,4.184907349695156,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119406,,,val,sda-all,samples/GSE228360/GSM7119406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119407,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,13,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4543,36601,counts,um,1.0,verified,True,H&E,4.175612787620365,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119407,,,val,sda-all,samples/GSE228360/GSM7119407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119408,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,13,male,extracted field,Male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1444,36601,counts,um,1.0,verified,True,H&E,4.192421859066654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119408,,,val,sda-all,samples/GSE228360/GSM7119408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119409,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,9,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3267,36601,counts,um,1.0,verified,True,H&E,4.179905308311322,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119409,,,val,sda-all,samples/GSE228360/GSM7119409,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119410,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,9,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3248,36601,counts,um,1.0,verified,True,H&E,4.184337782704977,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119410,,,val,sda-all,samples/GSE228360/GSM7119410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119411,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,14,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2149,36601,counts,um,1.0,verified,True,H&E,4.178654071938838,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119411,,,val,sda-all,samples/GSE228360/GSM7119411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119412,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,14,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2625,36601,counts,um,1.0,verified,True,H&E,4.177708664063777,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119412,,,val,sda-all,samples/GSE228360/GSM7119412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7119413,GSE228360,GSE228360,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,14,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2448,36601,counts,um,1.0,verified,True,H&E,4.1814904659872,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119413,,,val,sda-all,samples/GSE228360/GSM7119413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7120222,GSE228394,GSE228394,Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,adult,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3792,32285,counts,pixel,4.556740193177444,platform_constant,True,H&E,4.556740193177444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38264685,,GSM7120222,,,train,hesrt,samples/GSE228394/GSM7120222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7120223,GSE228394,GSE228394,Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Resilient,adult,age rule: age with unit,adult,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3861,32285,counts,pixel,4.486225452424432,platform_constant,True,H&E,4.486225452424432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38264685,,GSM7120223,,,train,hesrt,samples/GSE228394/GSM7120223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7120224,GSE228394,GSE228394,Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Susceptible,adult,age rule: age with unit,adult,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3790,32285,counts,pixel,4.556740193177444,platform_constant,True,H&E,4.556740193177444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38264685,,GSM7120224,,,train,hesrt,samples/GSE228394/GSM7120224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7123312,GSE228516,GSE228516,Aristolochic Acid Nephropathy 2 week time point of CD45+ cells,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0007416;MONDO:0005300,Balkan nephropathy;chronic kidney disease,disease,luna,,AAN CKD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2116,32285,counts,pixel,4.3853660597707425,platform_constant,True,H&E,4.3853660597707425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7123312,,,train,hesrt,samples/GSE228516/GSM7123312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7123558,GSE228534,GSE228534,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000981,femur,Femur,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,10 week old,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1078,19691,counts,um,1.0,verified,True,H&E-like (heuristic),4.276215138758491,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123558,,,test,sda-all,samples/GSE228534/GSM7123558,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7123559,GSE228534,GSE228534,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000981,femur,Femur,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,10 week old,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1038,19691,counts,um,1.0,verified,True,H&E-like (heuristic),4.272131936008995,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123559,,,test,sda-all,samples/GSE228534/GSM7123559,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7123560,GSE228534,GSE228534,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000981,femur,Femur,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,10 week old,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1223,19586,counts,um,1.0,verified,True,H&E-like (heuristic),4.421998433645894,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123560,,,test,sda-all,samples/GSE228534/GSM7123560,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7123561,GSE228534,GSE228534,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000981,femur,Femur,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,10 week old,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1193,19586,counts,um,1.0,verified,True,H&E-like (heuristic),4.420626813686164,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123561,,,test,sda-all,samples/GSE228534/GSM7123561,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7134911,GSE228685,GSE228685,Spatial transcriptomics of adenoid cystic carcinoma of the lacrimal gland,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0001817,lacrimal gland,Tumor section,tumour tissue,MONDO:0002463;MONDO:0004971,lacrimal gland carcinoma;adenoid cystic carcinoma,disease,luna,Adenoid cystic carcinoma of the lacrimal gland,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3584,17943,counts,pixel,1.010307195245044,platform_constant,True,H&E,1.010307195245044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37370820,,GSM7134911,,,train,hesrt,samples/GSE228685/GSM7134911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7146857,GSE228982,GSE228982,Molecular reframing of fibroblasts during resolution of arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0002217,synovial joint,synovial joint,primary tissue,MONDO:0011849,psoriatic arthritis,disease,luna,psoriatic arthritis,psoriatic arthritis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1389,36601,counts,pixel,3.9428570621074104,platform_constant,True,H&E,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146857,,,train,hesrt,samples/GSE228982/GSM7146857,sda-tissue-disease-2.5,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7146858,GSE228982,GSE228982,Molecular reframing of fibroblasts during resolution of arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0002217,synovial joint,synovial joint,primary tissue,MONDO:0011849,psoriatic arthritis,disease,luna,psoriatic arthritis,psoriatic arthritis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1368,36601,counts,pixel,3.9428570621074104,platform_constant,True,H&E,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146858,,,train,hesrt,samples/GSE228982/GSM7146858,sda-tissue-disease-2.5,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7146859,GSE228982,GSE228982,Molecular reframing of fibroblasts during resolution of arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0002217,synovial joint,synovial joint,primary tissue,,,normal,luna,healthy,healthy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,927,36601,counts,pixel,3.9428570621074104,platform_constant,True,H&E,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146859,,,train,hesrt,samples/GSE228982/GSM7146859,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7146860,GSE228982,GSE228982,Molecular reframing of fibroblasts during resolution of arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0002217,synovial joint,synovial joint,primary tissue,,,normal,luna,healthy,healthy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,899,36601,counts,pixel,3.9428570621074104,platform_constant,True,H&E,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146860,,,train,hesrt,samples/GSE228982/GSM7146860,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7156292,GSE229175,GSE229175,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,Ciona intestinalis,7719,vase tunicate,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,brain,luna,,,neural complex,primary tissue,,,normal,luna,,WT,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,492,18788,counts,pixel,4.041316950226493,platform_constant,True,H&E,4.041316950226493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40970208,,GSM7156292,,,train,hesrt,samples/GSE229175/GSM7156292,sda-tissue-disease-2.4,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.22, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM7156293,GSE229175,GSE229175,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,Ciona intestinalis,7719,vase tunicate,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,brain,luna,UBERON:0001017,central nervous system,neural complex,primary tissue,,,normal,luna,,WT,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,424,18788,counts,pixel,4.2855343622607105,platform_constant,True,H&E,4.2855343622607105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40970208,,GSM7156293,,,train,hesrt,samples/GSE229175/GSM7156293,sda-tissue-disease-2.4,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7156294,GSE229175,GSE229175,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,Ciona intestinalis,7719,vase tunicate,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,brain,luna,UBERON:0001017,central nervous system,neural complex,primary tissue,,,normal,luna,,WT,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,446,18788,counts,pixel,4.318580697036812,platform_constant,True,H&E,4.318580697036812,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40970208,,GSM7156294,,,train,hesrt,samples/GSE229175/GSM7156294,sda-tissue-disease-2.4,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7156295,GSE229175,GSE229175,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,Ciona intestinalis,7719,vase tunicate,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,brain,luna,UBERON:0001017,central nervous system,neural complex,primary tissue,,,normal,luna,,WT,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,648,18788,counts,pixel,4.252557856758691,platform_constant,True,H&E,4.252557856758691,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40970208,,GSM7156295,,,train,hesrt,samples/GSE229175/GSM7156295,sda-tissue-disease-2.4,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM7164655,GSE229508,GSE229508,Spatial transcriptome of developmental mouse brain reveals temporal dynamics of gene expressions and heterogeneity of the claustrum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,forebrain,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,979,32285,counts,pixel,4.339849705475763,platform_constant,True,H&E,4.339849705475763,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40210990,,GSM7164655,,,train,hesrt,samples/GSE229508/GSM7164655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7164656,GSE229508,GSE229508,Spatial transcriptome of developmental mouse brain reveals temporal dynamics of gene expressions and heterogeneity of the claustrum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,Forebrain,primary tissue,,,normal,luna,,WT,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1243,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.3425740514866735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40210990,,GSM7164656,,,train,sda-all,samples/GSE229508/GSM7164656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7169587,GSE229635,GSE229635,Spatial transcriptome of muscle sample from the main electric organ of electric eel,Electrophorus voltai,2609070,,Electrophorus voltai,2609070,,False,False,GEO organism field,Electrophorus voltai,,skeletal muscle,luna,UBERON:0006869,electric organ,the main electric organ,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2677,23221,counts,pixel,4.989781254820793,platform_constant,True,H&E,4.989781254820793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7169587,,,train,hesrt,samples/GSE229635/GSM7169587,sda-tissue-disease-2.4,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7169588,GSE229635,GSE229635,Spatial transcriptome of muscle sample from the main electric organ of electric eel,Electrophorus voltai,2609070,,Electrophorus voltai,2609070,,False,False,GEO organism field,Electrophorus voltai,,skeletal muscle,luna,UBERON:0006869,electric organ,the main electric organ,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2862,23221,counts,pixel,4.989781254820793,platform_constant,True,H&E,4.989781254820793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7169588,,,train,hesrt,samples/GSE229635/GSM7169588,sda-tissue-disease-2.4,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7169589,GSE229635,GSE229635,Spatial transcriptome of muscle sample from the main electric organ of electric eel,Electrophorus voltai,2609070,,Electrophorus voltai,2609070,,False,False,GEO organism field,Electrophorus voltai,,skeletal muscle,luna,UBERON:0006869,electric organ,the main electric organ,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2778,23221,counts,pixel,4.989781254820793,platform_constant,True,H&E,4.989781254820793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7169589,,,train,hesrt,samples/GSE229635/GSM7169589,sda-tissue-disease-2.4,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7173404,GSE229699,GSE229699,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,embryonic brain,primary tissue,,,normal,luna,,ampicillin control,embryonic,age rule: embryonic day,embryonic,12 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1122,32285,counts,pixel,1.647484024167604,platform_constant,True,H&E,1.647484024167604,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173404,,,train,hesrt,samples/GSE229699/GSM7173404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.93, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7173405,GSE229699,GSE229699,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,embryonic brain,primary tissue,MONDO:0005249,pneumonia,disease,mondo_predicate (Luna: perturbation),,S. pneumoniae + ampicillin challenge,embryonic,age rule: embryonic day,embryonic,12 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,914,32285,counts,pixel,1.6456828887440138,platform_constant,True,H&E,1.6456828887440138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173405,,,train,hesrt,samples/GSE229699/GSM7173405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM7173406,GSE229699,GSE229699,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,embryonic brain,primary tissue,,,normal,luna,,ampicillin control,embryonic,age rule: embryonic day,embryonic,12 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1817,32285,counts,pixel,1.6453800659822515,platform_constant,True,H&E,1.6453800659822515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173406,,,train,hesrt,samples/GSE229699/GSM7173406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7173407,GSE229699,GSE229699,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,embryonic brain,primary tissue,MONDO:0005249,pneumonia,disease,mondo_predicate (Luna: perturbation),,S. pneumoniae + ampicillin challenge,embryonic,age rule: embryonic day,embryonic,12 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,967,32285,counts,pixel,1.6465454419824532,platform_constant,True,H&E,1.6465454419824532,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173407,,,train,hesrt,samples/GSE229699/GSM7173407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM7173411,GSE229699,GSE229699,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,embryonic brain,primary tissue,MONDO:0005249,pneumonia,disease,mondo_predicate (Luna: perturbation),,S. pneumoniae + ampicillin challenge,embryonic,age rule: embryonic day,embryonic,12 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1336,32285,counts,pixel,1.6384600696878175,platform_constant,True,H&E,1.6384600696878175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173411,,,train,hesrt,samples/GSE229699/GSM7173411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7178570,GSE229823,GSE229823,Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment II,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,testis,luna,UBERON:0000473,testis,testis tumor,tumour tissue,MONDO:0010108,testicular germ cell tumor,disease,luna,seminoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1828,17943,counts,pixel,4.064953130974132,platform_constant,True,H&E,4.064953130974132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7178570,,,train,hesrt,samples/GSE229823/GSM7178570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7178571,GSE229823,GSE229823,Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment II,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,testis,luna,UBERON:0000473,testis,testis tumor,tumour tissue,MONDO:0010108,testicular germ cell tumor,disease,luna,seminoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2220,17943,counts,pixel,4.455607467947094,platform_constant,True,H&E,4.455607467947094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7178571,,,train,hesrt,samples/GSE229823/GSM7178571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7178572,GSE229823,GSE229823,Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment II,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,testis,luna,UBERON:0000473,testis,testis tumor,tumour tissue,MONDO:0010108,testicular germ cell tumor,disease,luna,seminoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2625,17943,counts,pixel,4.05490635482078,platform_constant,True,H&E,4.05490635482078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7178572,,,train,hesrt,samples/GSE229823/GSM7178572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7179596,GSE229877,GSE229877,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic Tissue,tumour tissue,MONDO:0024338,mucinous neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1586,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38553466,,GSM7179596,,,train,sda-all,samples/GSE229877/GSM7179596,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7179597,GSE229877,GSE229877,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic Tissue,tumour tissue,MONDO:0024338,mucinous neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1737,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38553466,,GSM7179597,,,train,sda-all,samples/GSE229877/GSM7179597,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7179598,GSE229877,GSE229877,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic Tissue,tumour tissue,MONDO:0024338,mucinous neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1143,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38553466,,GSM7179598,,,train,sda-all,samples/GSE229877/GSM7179598,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7179599,GSE229877,GSE229877,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic Tissue,tumour tissue,MONDO:0024338,mucinous neoplasm,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1356,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38553466,,GSM7179599,,,train,sda-all,samples/GSE229877/GSM7179599,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7186932,GSE230098,GSE230098,Orthotopic 4T1 tumors spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Primary tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Orthotopic 4T1 tumor-bearing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3787,19465,counts,pixel,4.199197806582958,platform_constant,True,H&E,4.199197806582958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186932,,,train,hesrt,samples/GSE230098/GSM7186932,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7186933,GSE230098,GSE230098,Orthotopic 4T1 tumors spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Primary tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Orthotopic 4T1 tumor-bearing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4392,19465,counts,pixel,4.132894683321118,platform_constant,True,H&E,4.132894683321118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186933,,,train,hesrt,samples/GSE230098/GSM7186933,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7186934,GSE230098,GSE230098,Orthotopic 4T1 tumors spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Primary tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Orthotopic 4T1 tumor-bearing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4185,19465,counts,pixel,4.199197806582937,platform_constant,True,H&E,4.199197806582937,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186934,,,train,hesrt,samples/GSE230098/GSM7186934,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7186935,GSE230098,GSE230098,Orthotopic 4T1 tumors spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Primary tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Orthotopic 4T1 tumor-bearing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3924,19465,counts,pixel,4.199197806582958,platform_constant,True,H&E,4.199197806582958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186935,,,train,hesrt,samples/GSE230098/GSM7186935,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7192449,GSE230207,GSE230207,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,PCNSL,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,primary central nervous system lymphoma,hot,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4517,17922,counts,pixel,4.5878702399814,platform_constant,True,H&E,4.5878702399814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192449,,,train,hesrt,samples/GSE230207/GSM7192449,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7192450,GSE230207,GSE230207,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,PCNSL,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,primary central nervous system lymphoma,cold,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4395,17922,counts,pixel,4.131361143976745,platform_constant,True,H&E,4.131361143976745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192450,,,train,hesrt,samples/GSE230207/GSM7192450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7192451,GSE230207,GSE230207,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,PCNSL,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,primary central nervous system lymphoma,IME,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4349,17922,counts,pixel,4.131361143976745,platform_constant,True,H&E,4.131361143976745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192451,,,train,hesrt,samples/GSE230207/GSM7192451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7192453,GSE230207,GSE230207,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,PCNSL,tumour tissue,MONDO:0002571,primary central nervous system lymphoma,disease,luna,primary central nervous system lymphoma,IMS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4669,17922,counts,pixel,4.529532288259535,platform_constant,True,H&E,4.529532288259535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192453,,,train,hesrt,samples/GSE230207/GSM7192453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7211257,GSE230282,GSE230282,Spatial transcriptomics of de novo NEPC and ARPC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,prostate,luna,UBERON:0002367,prostate gland,prostatic cancer,tumour tissue,MONDO:0004992,cancer,disease,luna,"NEPC pT4N1M0 and ARPC pT2aN0M0, Gleason score of 4+4",de novo NEPC and ARPC,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4397,37082,counts,pixel,6.881358927538902,platform_constant,True,H&E,6.881358927538902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37240308,,GSM7211257,,,train,hesrt,samples/GSE230282/GSM7211257,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7221915,GSE230424,GSE230424,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,thyroid,primary tissue,MONDO:0005075;MONDO:0007699,thyroid gland papillary carcinoma;Hashimoto thyroiditis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,GSE230424:P1,P1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3647,36601,counts,pixel,0.4694783941038249,platform_constant,True,H&E,0.4999970956818088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221915,,,train,hesrt,samples/GSE230424/GSM7221915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7221916,GSE230424,GSE230424,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,thyroid,primary tissue,MONDO:0005075;MONDO:0007699,thyroid gland papillary carcinoma;Hashimoto thyroiditis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE230424:P2,P2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3154,36601,counts,pixel,0.4694783941038249,platform_constant,True,H&E,0.4999902961416205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221916,,,train,hesrt,samples/GSE230424/GSM7221916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7221917,GSE230424,GSE230424,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,thyroid,primary tissue,MONDO:0005075;MONDO:0007699,thyroid gland papillary carcinoma;Hashimoto thyroiditis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE230424:P3,P3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4062,36601,counts,pixel,0.4694783941038249,platform_constant,True,H&E,0.4999895685634026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221917,,,train,hesrt,samples/GSE230424/GSM7221917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7221918,GSE230424,GSE230424,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,thyroid,primary tissue,MONDO:0005075;MONDO:0007699,thyroid gland papillary carcinoma;Hashimoto thyroiditis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE230424:P4,P4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4626,36601,counts,pixel,0.4694783941038249,platform_constant,True,H&E,0.5000015780429101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221918,,,train,hesrt,samples/GSE230424/GSM7221918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7234197,GSE230776,GSE230776,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Slide-seq],Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,other,luna,UBERON:0002100,trunk,embryonic trunk,primary tissue,,,normal,luna,,wild-type,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,20983,17233,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,36840366,,GSM7234197,,,train,sda-all,samples/GSE230776/GSM7234197,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM7234200,GSE230778+GSE230780,GSE230778,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,other,luna,UBERON:0002100,trunk,embryonic trunk,primary tissue,,,normal,luna,,wild-type,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4418,24356,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36840366,,GSM7234200,,,train,sda-all,samples/GSE230778/GSM7234200,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM7234201,GSE230778+GSE230780,GSE230778,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,other,luna,UBERON:0002100,trunk,embryonic trunk,primary tissue,,,normal,luna,,wild-type,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3123,24356,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36840366,,GSM7234201,,,train,sda-all,samples/GSE230778/GSM7234201,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7234202,GSE230778+GSE230780,GSE230778,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,other,luna,UBERON:0002100,trunk,embryonic trunk,primary tissue,,,normal,luna,,wild-type,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4935,24356,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36840366,,GSM7234202,,,train,sda-all,samples/GSE230778/GSM7234202,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7234203,GSE230778+GSE230780,GSE230778,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,other,luna,UBERON:0002100,trunk,embryonic trunk,primary tissue,,,normal,luna,,wild-type,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4806,24356,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36840366,,GSM7234203,,,train,sda-all,samples/GSE230778/GSM7234203,sda-tissue-disease-2.4,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7267702,GSE231385,GSE231385,SDePER: a hybrid machine learning and regression method for cell-type deconvolution of spatial barcoding-based transcriptomic data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Fibrotic Lung,primary tissue,,,disease,luna,Idiopathic Pulmonary Fibrosis,Idiopathic Pulmonary Fibrosis,adult,age rule: bare number read as years,adult,63,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3532,32078,counts,pixel,2.3570226039551585,platform_constant,True,H&E,2.3570226039551585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39402626,,GSM7267702,,,train,hesrt,samples/GSE231385/GSM7267702,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7286753,GSE231496,GSE231496,A masked generative graph representation learning framework empowering precise spatial domain identification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,human embryonic heart,primary tissue,,,normal,luna,,,fetal,luna,fetal,9 weeks of gestation,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,882,36601,counts,um,1.0,verified,True,H&E,4.302271502637329,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42178226,,GSM7286753,,,train,sda-all,samples/GSE231496/GSM7286753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8342992,GSE231998,GSE231998,The use of ectopic volar fibroblasts to modify skin identity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,62453,522,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,39236183,,GSM8342992,,,train,sda-all,samples/GSE231998/GSM8342992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7336995,GSE232477,GSE232477,HIV-1 activates oxidative phosphorylation in infected CD4 T cells in a human tonsil explant model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,tonsils,primary tissue,,,normal,luna,,unexposed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,73,36602,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,"registration is correct, but the sample may be unusable",37325659,,GSM7336995,,,train,sda-all,samples/GSE232477/GSM7336995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.52, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM7372755,GSE232734,GSE232734,Synovial Th17 transdifferentiation into exTh17 sustains chronic IL-17-independent  inflammatory arthritis [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,Human Synovium,primary tissue,MONDO:0008383,rheumatoid arthritis,disease,luna,rheumatoid arthritis,"rheumatoid arthritis, ACPA and RF positive with active disease",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1878,36601,counts,pixel,7.198157507486946,platform_constant,True,H&E,7.198157507486946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202149,,GSM7372755,,,train,hesrt,samples/GSE232734/GSM7372755,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7372756,GSE232734,GSE232734,Synovial Th17 transdifferentiation into exTh17 sustains chronic IL-17-independent  inflammatory arthritis [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,Human Synovium,primary tissue,MONDO:0008383,rheumatoid arthritis,disease,luna,rheumatoid arthritis,"rheumatoid arthritis, ACPA and RF positive with active disease",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,836,36601,counts,pixel,7.198157507486946,platform_constant,True,H&E,7.198157507486946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202149,,GSM7372756,,,train,hesrt,samples/GSE232734/GSM7372756,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7373501,GSE232766,GSE232766,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Plexiform Neurofibroma,tumour tissue,MONDO:0003304;MONDO:0018975,plexiform neurofibroma;neurofibromatosis type 1,disease,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1519,36601,counts,pixel,0.4694835680751174,platform_constant,True,H&E,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373501,,,train,hesrt,samples/GSE232766/GSM7373501,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7373502,GSE232766,GSE232766,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Plexiform Neurofibroma,tumour tissue,MONDO:0003304;MONDO:0018975,plexiform neurofibroma;neurofibromatosis type 1,disease,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3076,36601,counts,pixel,0.4694835680751174,platform_constant,True,H&E,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373502,,,train,hesrt,samples/GSE232766/GSM7373502,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7373503,GSE232766,GSE232766,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Plexiform Neurofibroma,tumour tissue,MONDO:0003304;MONDO:0018975,plexiform neurofibroma;neurofibromatosis type 1,disease,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1591,36601,counts,pixel,0.4694835680751174,platform_constant,True,H&E,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373503,,,train,hesrt,samples/GSE232766/GSM7373503,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7373504,GSE232766,GSE232766,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Plexiform Neurofibroma,tumour tissue,MONDO:0003304;MONDO:0018975,plexiform neurofibroma;neurofibromatosis type 1,disease,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2364,36601,counts,pixel,0.4694835680751174,platform_constant,True,H&E,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373504,,,train,hesrt,samples/GSE232766/GSM7373504,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7392310,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2856,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392310,,,train,hesrt,samples/GSE232910/GSM7392310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.89, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7392311,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3002,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392311,,,train,hesrt,samples/GSE232910/GSM7392311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.84, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7392312,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,control,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3163,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392312,,,train,hesrt,samples/GSE232910/GSM7392312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.9400000000000001, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM7392313,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2913,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392313,,,train,hesrt,samples/GSE232910/GSM7392313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.9, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM7392314,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2675,32285,counts,pixel,4.1205420098375045,platform_constant,True,H&E,4.1205420098375045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392314,,,train,hesrt,samples/GSE232910/GSM7392314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.8300000000000001, ""life_stage"": 0.98}",,
GSM7392315,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3120,32285,counts,pixel,4.148959456753987,platform_constant,True,H&E,4.148959456753987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392315,,,train,hesrt,samples/GSE232910/GSM7392315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.8200000000000001, ""life_stage"": 0.9500000000000001}",,
GSM7392316,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2918,32285,counts,pixel,4.156131367191437,platform_constant,True,H&E,4.156131367191437,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392316,,,train,hesrt,samples/GSE232910/GSM7392316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.78, ""life_stage"": 0.98}",,
GSM7392317,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,control,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3017,32285,counts,pixel,4.148959456753987,platform_constant,True,H&E,4.148959456753987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392317,,,train,hesrt,samples/GSE232910/GSM7392317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.8, ""life_stage"": 0.98}",,
GSM7392318,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002038,substantia nigra,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2964,32285,counts,pixel,4.148965623454878,platform_constant,True,H&E,4.148965623454878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392318,,,train,hesrt,samples/GSE232910/GSM7392318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM7392319,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002038,substantia nigra,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3357,32285,counts,pixel,4.148959456753968,platform_constant,True,H&E,4.148959456753968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392319,,,train,hesrt,samples/GSE232910/GSM7392319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7392320,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002038,substantia nigra,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3601,32285,counts,pixel,4.148940956816233,platform_constant,True,H&E,4.148940956816233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392320,,,train,hesrt,samples/GSE232910/GSM7392320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM7392321,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002038,substantia nigra,brain,primary tissue,,,disease,luna,,control,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3504,32285,counts,pixel,4.134708009628609,platform_constant,True,H&E,4.134708009628609,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392321,,,train,hesrt,samples/GSE232910/GSM7392321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7392322,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002038,substantia nigra,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3617,32285,counts,pixel,4.185880309733634,platform_constant,True,H&E,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392322,,,train,hesrt,samples/GSE232910/GSM7392322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7392323,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002435,striatum,brain,primary tissue,,,disease,luna,,6-OHDA lesioned,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE232910:brain,brain,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3116,32285,counts,pixel,4.185880309733614,platform_constant,True,H&E,4.185880309733614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392323,,,train,hesrt,samples/GSE232910/GSM7392323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.9, ""life_stage"": 0.92}",,
GSM7392324,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001873,caudate nucleus,brain,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's disease,Parkinson's disease,aged,age rule: age in years,aged,94 years,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3900,36601,counts,pixel,4.171520556824052,platform_constant,True,H&E,4.171520556824052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392324,,,train,hesrt,samples/GSE232910/GSM7392324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7392325,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001873,caudate nucleus,brain,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's disease,Parkinson's disease,aged,age rule: age in years,aged,94 years,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4968,17943,counts,pixel,4.1786880967760025,platform_constant,True,H&E,4.1786880967760025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392325,,,train,hesrt,samples/GSE232910/GSM7392325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7392326,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001873,caudate nucleus,brain,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's disease,Parkinson's disease,aged,age rule: age in years,aged,94 years,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4984,17943,counts,pixel,4.193097323315207,platform_constant,True,H&E,4.193097323315207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392326,,,train,hesrt,samples/GSE232910/GSM7392326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7392327,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001873,caudate nucleus,brain,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's disease,Parkinson's disease,aged,age rule: age in years,aged,94 years,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4868,17943,counts,pixel,4.193078626569605,platform_constant,True,H&E,4.193078626569605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392327,,,train,hesrt,samples/GSE232910/GSM7392327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7392328,GSE232910,GSE232910,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001873,caudate nucleus,brain,primary tissue,MONDO:0005180,Parkinson disease,disease,luna,Parkinson's disease,Parkinson's disease,aged,age rule: age in years,aged,94 years,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4633,17943,counts,pixel,4.193078626569605,platform_constant,True,H&E,4.193078626569605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392328,,,train,hesrt,samples/GSE232910/GSM7392328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7412831,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2607,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412831,,,train,sda-all,samples/GSE233208/GSM7412831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412832,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2424,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412832,,,train,sda-all,samples/GSE233208/GSM7412832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412833,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2206,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412833,,,train,sda-all,samples/GSE233208/GSM7412833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412834,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X?,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2629,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412834,,,train,sda-all,samples/GSE233208/GSM7412834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412835,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2782,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412835,,,train,sda-all,samples/GSE233208/GSM7412835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412836,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2846,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412836,,,train,sda-all,samples/GSE233208/GSM7412836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412837,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2482,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412837,,,train,sda-all,samples/GSE233208/GSM7412837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412838,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2772,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412838,,,train,sda-all,samples/GSE233208/GSM7412838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412839,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2573,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412839,,,train,sda-all,samples/GSE233208/GSM7412839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7412840,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2755,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412840,,,train,sda-all,samples/GSE233208/GSM7412840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412841,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2728,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412841,,,train,sda-all,samples/GSE233208/GSM7412841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412842,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2654,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412842,,,train,sda-all,samples/GSE233208/GSM7412842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412843,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2198,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412843,,,train,sda-all,samples/GSE233208/GSM7412843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412844,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3160,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412844,,,train,sda-all,samples/GSE233208/GSM7412844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412845,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2969,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412845,,,train,sda-all,samples/GSE233208/GSM7412845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412846,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2721,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412846,,,train,sda-all,samples/GSE233208/GSM7412846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412848,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2533,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412848,,,train,sda-all,samples/GSE233208/GSM7412848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412850,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2408,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412850,,,train,sda-all,samples/GSE233208/GSM7412850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412852,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2771,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412852,,,train,sda-all,samples/GSE233208/GSM7412852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412853,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2520,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412853,,,train,sda-all,samples/GSE233208/GSM7412853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412855,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2365,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412855,,,train,sda-all,samples/GSE233208/GSM7412855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412857,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2251,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412857,,,train,sda-all,samples/GSE233208/GSM7412857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412859,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2476,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412859,,,train,sda-all,samples/GSE233208/GSM7412859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412861,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2657,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412861,,,train,sda-all,samples/GSE233208/GSM7412861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412864,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2338,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412864,,,train,sda-all,samples/GSE233208/GSM7412864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412865,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2442,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412865,,,train,sda-all,samples/GSE233208/GSM7412865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412867,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2914,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412867,,,train,sda-all,samples/GSE233208/GSM7412867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412869,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2408,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412869,,,train,sda-all,samples/GSE233208/GSM7412869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412871,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2741,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412871,,,train,sda-all,samples/GSE233208/GSM7412871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412872,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2495,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412872,,,train,sda-all,samples/GSE233208/GSM7412872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412873,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X?,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2706,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412873,,,train,sda-all,samples/GSE233208/GSM7412873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412874,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2479,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412874,,,train,sda-all,samples/GSE233208/GSM7412874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412875,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2602,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412875,,,train,sda-all,samples/GSE233208/GSM7412875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412876,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3163,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412876,,,train,sda-all,samples/GSE233208/GSM7412876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412877,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2609,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412877,,,train,sda-all,samples/GSE233208/GSM7412877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412878,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2754,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412878,,,train,sda-all,samples/GSE233208/GSM7412878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412879,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2615,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412879,,,train,sda-all,samples/GSE233208/GSM7412879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412881,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2831,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412881,,,train,sda-all,samples/GSE233208/GSM7412881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412883,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2257,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412883,,,train,sda-all,samples/GSE233208/GSM7412883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7412885,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2994,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412885,,,train,sda-all,samples/GSE233208/GSM7412885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7412887,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,manual,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2805,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412887,,,train,sda-all,samples/GSE233208/GSM7412887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": null, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7412888,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2447,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412888,,,train,sda-all,samples/GSE233208/GSM7412888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412889,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,manual,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2791,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412889,,,train,sda-all,samples/GSE233208/GSM7412889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": null, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412890,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2676,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412890,,,train,sda-all,samples/GSE233208/GSM7412890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412891,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,manual,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2992,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412891,,,train,sda-all,samples/GSE233208/GSM7412891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412892,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3009,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412892,,,train,sda-all,samples/GSE233208/GSM7412892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412893,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,manual,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2788,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412893,,,train,sda-all,samples/GSE233208/GSM7412893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412894,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2847,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412894,,,train,sda-all,samples/GSE233208/GSM7412894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412895,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2567,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412895,,,train,sda-all,samples/GSE233208/GSM7412895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412896,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2791,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412896,,,train,sda-all,samples/GSE233208/GSM7412896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412897,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2439,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412897,,,train,sda-all,samples/GSE233208/GSM7412897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412898,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2164,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412898,,,train,sda-all,samples/GSE233208/GSM7412898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7412899,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2652,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412899,,,train,sda-all,samples/GSE233208/GSM7412899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412900,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2797,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412900,,,train,sda-all,samples/GSE233208/GSM7412900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412901,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2533,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412901,,,train,sda-all,samples/GSE233208/GSM7412901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412902,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2387,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412902,,,train,sda-all,samples/GSE233208/GSM7412902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412903,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2340,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412903,,,train,sda-all,samples/GSE233208/GSM7412903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412904,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2856,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412904,,,train,sda-all,samples/GSE233208/GSM7412904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412905,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2636,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412905,,,train,sda-all,samples/GSE233208/GSM7412905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412906,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2206,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412906,,,train,sda-all,samples/GSE233208/GSM7412906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412907,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2795,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412907,,,train,sda-all,samples/GSE233208/GSM7412907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412908,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2585,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412908,,,train,sda-all,samples/GSE233208/GSM7412908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412909,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2863,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412909,,,train,sda-all,samples/GSE233208/GSM7412909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412910,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2189,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412910,,,train,sda-all,samples/GSE233208/GSM7412910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412912,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2994,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412912,,,train,sda-all,samples/GSE233208/GSM7412912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412913,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2964,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412913,,,train,sda-all,samples/GSE233208/GSM7412913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412914,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2927,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412914,,,train,sda-all,samples/GSE233208/GSM7412914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412915,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,4mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2744,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412915,,,train,sda-all,samples/GSE233208/GSM7412915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7412916,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,4mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2711,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412916,,,train,sda-all,samples/GSE233208/GSM7412916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412917,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2710,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412917,,,train,sda-all,samples/GSE233208/GSM7412917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7412918,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2827,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412918,,,train,sda-all,samples/GSE233208/GSM7412918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412919,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2529,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412919,,,train,sda-all,samples/GSE233208/GSM7412919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412920,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,8mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2783,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412920,,,train,sda-all,samples/GSE233208/GSM7412920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412921,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2697,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412921,,,train,sda-all,samples/GSE233208/GSM7412921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412922,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2851,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412922,,,train,sda-all,samples/GSE233208/GSM7412922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412923,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2670,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412923,,,train,sda-all,samples/GSE233208/GSM7412923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412924,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,6mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2743,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412924,,,train,sda-all,samples/GSE233208/GSM7412924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412925,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2636,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412925,,,train,sda-all,samples/GSE233208/GSM7412925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412926,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,WT,Mouse_Visium,adult,age rule: age with unit,adult,12mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2730,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412926,,,train,sda-all,samples/GSE233208/GSM7412926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412927,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,5X,Mouse_Visium,adult,age rule: age with unit,adult,8mo,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2743,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412927,,,train,sda-all,samples/GSE233208/GSM7412927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412928,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,74,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2560,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412928,,,train,sda-all,samples/GSE233208/GSM7412928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412930,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2045,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412930,,,train,sda-all,samples/GSE233208/GSM7412930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412932,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3069,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412932,,,train,sda-all,samples/GSE233208/GSM7412932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412934,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608;MONDO:0002254,Alzheimer disease;Down syndrome;syndromic disease,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,63,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3099,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412934,,,train,sda-all,samples/GSE233208/GSM7412934,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412936,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2471,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412936,,,train,sda-all,samples/GSE233208/GSM7412936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412938,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3334,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412938,,,train,sda-all,samples/GSE233208/GSM7412938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412940,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,58,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3871,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412940,,,train,sda-all,samples/GSE233208/GSM7412940,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412942,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,74,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3459,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412942,,,train,sda-all,samples/GSE233208/GSM7412942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412943,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2213,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412943,,,train,sda-all,samples/GSE233208/GSM7412943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412944,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3423,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412944,,,train,sda-all,samples/GSE233208/GSM7412944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412945,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,63,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2560,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412945,,,train,sda-all,samples/GSE233208/GSM7412945,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412946,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2747,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412946,,,train,sda-all,samples/GSE233208/GSM7412946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412947,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3473,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412947,,,train,sda-all,samples/GSE233208/GSM7412947,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412948,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3543,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412948,,,train,sda-all,samples/GSE233208/GSM7412948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412949,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,58,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2826,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412949,,,train,sda-all,samples/GSE233208/GSM7412949,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412950,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,adult,age rule: bare number read as years,adult,64,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3283,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412950,,,train,sda-all,samples/GSE233208/GSM7412950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7412951,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,87,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2519,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412951,,,train,sda-all,samples/GSE233208/GSM7412951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412952,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,89,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1550,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412952,,,train,sda-all,samples/GSE233208/GSM7412952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412953,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,57,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3150,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412953,,,train,sda-all,samples/GSE233208/GSM7412953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412954,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3851,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412954,,,train,sda-all,samples/GSE233208/GSM7412954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412955,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,90,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2820,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412955,,,train,sda-all,samples/GSE233208/GSM7412955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412956,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2826,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412956,,,train,sda-all,samples/GSE233208/GSM7412956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412957,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608;MONDO:0002254,Alzheimer disease;Down syndrome;syndromic disease,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,62,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3342,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412957,,,train,sda-all,samples/GSE233208/GSM7412957,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412959,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2582,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412959,,,train,sda-all,samples/GSE233208/GSM7412959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412960,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,90,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2621,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412960,,,train,sda-all,samples/GSE233208/GSM7412960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412961,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,56,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3124,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412961,,,train,sda-all,samples/GSE233208/GSM7412961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412962,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2432,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412962,,,train,sda-all,samples/GSE233208/GSM7412962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412963,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,79,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2248,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412963,,,train,sda-all,samples/GSE233208/GSM7412963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412964,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2731,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412964,,,train,sda-all,samples/GSE233208/GSM7412964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412965,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,aged,age rule: bare number read as years,aged,66,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2775,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412965,,,train,sda-all,samples/GSE233208/GSM7412965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412966,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,90,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3518,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412966,,,train,sda-all,samples/GSE233208/GSM7412966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412967,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,4317,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412967,,,train,sda-all,samples/GSE233208/GSM7412967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412968,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,90,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2573,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412968,,,train,sda-all,samples/GSE233208/GSM7412968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412969,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,56,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3127,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412969,,,train,sda-all,samples/GSE233208/GSM7412969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412970,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,79,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2561,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412970,,,train,sda-all,samples/GSE233208/GSM7412970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412971,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,earlyAD,Human_Visium,aged,age rule: bare number read as years,aged,90,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3666,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412971,,,train,sda-all,samples/GSE233208/GSM7412971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412972,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,AD,Human_Visium,aged,age rule: bare number read as years,aged,90,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2500,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412972,,,train,sda-all,samples/GSE233208/GSM7412972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412973,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,MONDO:0004975;MONDO:0008608,Alzheimer disease;Down syndrome,disease,luna,AD_DS,Human_Visium,adult,age rule: bare number read as years,adult,55,female,extracted field,F,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2975,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412973,,,train,sda-all,samples/GSE233208/GSM7412973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412974,GSE233208,GSE233208,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Prefrontal Cortex,primary tissue,,,normal,luna,Control,Human_Visium,aged,age rule: bare number read as years,aged,83,male,extracted field,M,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3667,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39578645,,GSM7412974,,,train,sda-all,samples/GSE233208/GSM7412974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7413167,GSE233223,GSE233223,spatial RNA-seq of SCG,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0001806,sympathetic ganglion,Sympathetic ganglion,primary tissue,,,normal,luna,,wildtype,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,merfish,,,cell,4988,180,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,UNSURE,,,37471539,,GSM7413167,,,train,sda-all,samples/GSE233223/GSM7413167,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7422460,GSE233254,GSE233254,Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 Expression as a Driver of Gastric Differentiation and Indolent Biological Potential,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0024338,mucinous neoplasm,disease,luna,intraductal papillary mucinous neoplasm,0.0060% doxycycline diet,adult,age rule: age with unit,adult,23 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1692,32285,counts,pixel,4.187761144396365,platform_constant,True,H&E,4.187761144396365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7422460,,,test,hesrt,samples/GSE233254/GSM7422460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7422461,GSE233254,GSE233254,Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 Expression as a Driver of Gastric Differentiation and Indolent Biological Potential,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0024338,mucinous neoplasm,disease,luna,intraductal papillary mucinous neoplasm,0.0060% doxycycline diet,adult,age rule: age with unit,adult,33 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2942,32285,counts,pixel,4.203883565377045,platform_constant,True,H&E,4.203883565377045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7422461,,,test,hesrt,samples/GSE233254/GSM7422461,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421780,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,75,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,782,36601,counts,pixel,4.19313533330282,platform_constant,True,H&E,4.19313533330282,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421780,,,train,hesrt,samples/GSE233293/GSM7421780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421781,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,76,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1371,36601,counts,pixel,4.18360772464865,platform_constant,True,H&E,4.18360772464865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421781,,,train,hesrt,samples/GSE233293/GSM7421781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421782,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,56,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,778,36601,counts,pixel,4.174324288905167,platform_constant,True,H&E,4.174324288905167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421782,,,train,hesrt,samples/GSE233293/GSM7421782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421783,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,67,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,839,36601,counts,pixel,4.216027962024012,platform_constant,True,H&E,4.216027962024012,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421783,,,train,hesrt,samples/GSE233293/GSM7421783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7421784,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,700,36601,counts,pixel,4.001315943184254,platform_constant,True,H&E,4.001315943184254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421784,,,train,hesrt,samples/GSE233293/GSM7421784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421785,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,51,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,885,36601,counts,pixel,4.090789241940999,platform_constant,True,H&E,4.090789241940999,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421785,,,train,hesrt,samples/GSE233293/GSM7421785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421786,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Low grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,76,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,862,36601,counts,pixel,4.0539473037606,platform_constant,True,H&E,4.0539473037606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421786,,,train,hesrt,samples/GSE233293/GSM7421786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421787,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,High grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,72,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1002,36601,counts,pixel,4.17163918126101,platform_constant,True,H&E,4.17163918126101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421787,,,train,hesrt,samples/GSE233293/GSM7421787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421788,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,High grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,89,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,475,36601,counts,pixel,4.155516774579838,platform_constant,True,H&E,4.155516774579838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421788,,,train,hesrt,samples/GSE233293/GSM7421788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421789,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,High grade IPMN,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,62,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,992,36601,counts,pixel,4.080279565730672,platform_constant,True,H&E,4.080279565730672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421789,,,train,hesrt,samples/GSE233293/GSM7421789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421790,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,High grade IPMN with co-ocurring PDAC,tumour tissue,MONDO:0004286;MONDO:0005184,pancreatic intraductal papillary-mucinous neoplasm;pancreatic ductal adenocarcinoma,disease,luna,,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1684,36601,counts,pixel,4.340307045195805,platform_constant,True,H&E,4.340307045195805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421790,,,train,hesrt,samples/GSE233293/GSM7421790,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421791,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,High grade IPMN with co-ocurring PDAC,tumour tissue,MONDO:0004286;MONDO:0005184,pancreatic intraductal papillary-mucinous neoplasm;pancreatic ductal adenocarcinoma,disease,luna,,,aged,age rule: bare number read as years,aged,85,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,879,36601,counts,pixel,4.226834874600234,platform_constant,True,H&E,4.226834874600234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421791,,,train,hesrt,samples/GSE233293/GSM7421791,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421792,GSE233293,GSE233293,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,High grade IPMN with co-ocurring PDAC,tumour tissue,MONDO:0004286;MONDO:0005184,pancreatic intraductal papillary-mucinous neoplasm;pancreatic ductal adenocarcinoma,disease,luna,,,aged,age rule: bare number read as years,aged,66,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,996,36601,counts,pixel,4.128646344255141,platform_constant,True,H&E,4.128646344255141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421792,,,train,hesrt,samples/GSE233293/GSM7421792,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7429786,GSE233513,GSE233513,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0004538,left kidney,kidney,primary tissue,,,normal,luna,,Normal ctrl,adult,age rule: age with unit,juvenile,7–8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2616,32285,counts,pixel,3.950863915094553,platform_constant,True,H&E,3.950863915094553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429786,,,val,hesrt,samples/GSE233513/GSM7429786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7429787,GSE233513,GSE233513,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0004538,left kidney,kidney,primary tissue,,,normal,luna,,Normal ctrl,adult,age rule: age with unit,juvenile,7–8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2682,32285,counts,pixel,3.947906321308024,platform_constant,True,H&E,3.947906321308024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429787,,,val,hesrt,samples/GSE233513/GSM7429787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7429788,GSE233513,GSE233513,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0004538,left kidney,kidney,primary tissue,,,perturbation,luna,,Ischemic reperfusion injury,adult,age rule: age with unit,juvenile,7–8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2401,32285,counts,pixel,3.972603057182472,platform_constant,True,H&E,3.972603057182472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429788,,,val,hesrt,samples/GSE233513/GSM7429788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7429789,GSE233513,GSE233513,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0004538,left kidney,kidney,primary tissue,,,disease,luna,,Ischemic reperfusion injury,adult,age rule: age with unit,juvenile,7–8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2613,32285,counts,pixel,4.026213851097409,platform_constant,True,H&E,4.026213851097409,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429789,,,val,hesrt,samples/GSE233513/GSM7429789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.97, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7430670,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Fluoxetine,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,322,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430670,,,train,sda-all,samples/GSE233571/GSM7430670,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7430671,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Maltodextrin,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,205,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430671,,,train,sda-all,samples/GSE233571/GSM7430671,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7430672,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Probiotics,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,198,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430672,,,train,sda-all,samples/GSE233571/GSM7430672,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM7430673,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,361,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430673,,,train,sda-all,samples/GSE233571/GSM7430673,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM7430675,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Maltodextrin,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,241,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430675,,,train,sda-all,samples/GSE233571/GSM7430675,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7430676,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Probiotics,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,208,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430676,,,train,sda-all,samples/GSE233571/GSM7430676,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7430677,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,359,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430677,,,train,sda-all,samples/GSE233571/GSM7430677,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7430678,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Fluoxetine,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,157,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430678,,,train,sda-all,samples/GSE233571/GSM7430678,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM7430679,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Probiotics,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,317,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430679,,,train,sda-all,samples/GSE233571/GSM7430679,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7430680,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,337,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430680,,,train,sda-all,samples/GSE233571/GSM7430680,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7430681,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Fluoxetine,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,339,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430681,,,train,sda-all,samples/GSE233571/GSM7430681,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM7430682,GSE233571,GSE233571,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0016542,limbic cortex,"Pre- and infra- limbic cortex (PLC, ILC)",primary tissue,,,perturbation,luna,,Probiotics,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,376,32623,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM7430682,,,train,sda-all,samples/GSE233571/GSM7430682,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7441442,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,8PCW,embryonic,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,unknown,not stated,,GSE234035:15817,15817,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,447,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441442,,,test,hesrt,samples/GSE234035/GSM7441442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441443,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,8PCW,embryonic,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,unknown,not stated,,GSE234035:15817,15817,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,450,33538,counts,pixel,4.667126879902728,platform_constant,True,H&E,4.667126879902728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441443,,,test,hesrt,samples/GSE234035/GSM7441443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM7441444,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,8PCW,embryonic,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,unknown,not stated,,GSE234035:15817,15817,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,389,33538,counts,pixel,4.644008985451028,platform_constant,True,H&E,4.644008985451028,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441444,,,test,hesrt,samples/GSE234035/GSM7441444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.64, ""life_stage"": 0.93}",,
GSM7441445,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,8PCW,embryonic,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,unknown,not stated,,GSE234035:15817,15817,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,504,33538,counts,pixel,4.667126879902728,platform_constant,True,H&E,4.667126879902728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441445,,,test,hesrt,samples/GSE234035/GSM7441445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441446,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,10PCW,fetal,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,unknown,not stated,,GSE234035:15870,15870,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1181,33538,counts,pixel,4.392251995818518,platform_constant,True,H&E,4.392251995818518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441446,,,test,hesrt,samples/GSE234035/GSM7441446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441447,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,10PCW,fetal,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,unknown,not stated,,GSE234035:15870,15870,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1222,33538,counts,pixel,4.392251995818496,platform_constant,True,H&E,4.392251995818496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441447,,,test,hesrt,samples/GSE234035/GSM7441447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441448,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,10PCW,fetal,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,unknown,not stated,,GSE234035:15870,15870,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1212,33538,counts,pixel,4.392251995818518,platform_constant,True,H&E,4.392251995818518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441448,,,test,hesrt,samples/GSE234035/GSM7441448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441449,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,10PCW,fetal,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,unknown,not stated,,GSE234035:15870,15870,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1188,33538,counts,pixel,4.392251995818495,platform_constant,True,H&E,4.392251995818495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441449,,,test,hesrt,samples/GSE234035/GSM7441449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441450,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,11PCW,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,GSE234035:15685,15685,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1154,33538,counts,pixel,4.4008075453332856,platform_constant,True,H&E,4.4008075453332856,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441450,,,test,hesrt,samples/GSE234035/GSM7441450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441451,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,11PCW,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,GSE234035:15685,15685,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1181,33538,counts,pixel,4.415178572954832,platform_constant,True,H&E,4.415178572954832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441451,,,test,hesrt,samples/GSE234035/GSM7441451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441452,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,11PCW,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,GSE234035:15685,15685,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,976,33538,counts,pixel,4.415178572954832,platform_constant,True,H&E,4.415178572954832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441452,,,test,hesrt,samples/GSE234035/GSM7441452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441453,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,11PCW,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,GSE234035:15685,15685,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1060,33538,counts,pixel,4.415178572954832,platform_constant,True,H&E,4.415178572954832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441453,,,test,hesrt,samples/GSE234035/GSM7441453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441454,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,13PCW,fetal,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,unknown,not stated,,GSE234035:14749,14749,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1124,33538,counts,pixel,4.645410104500985,platform_constant,True,H&E,4.645410104500985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441454,,,test,hesrt,samples/GSE234035/GSM7441454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM7441455,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,13PCW,fetal,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,unknown,not stated,,GSE234035:14749,14749,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1183,33538,counts,pixel,4.668111309690189,platform_constant,True,H&E,4.668111309690189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441455,,,test,hesrt,samples/GSE234035/GSM7441455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441456,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,13PCW,fetal,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,unknown,not stated,,GSE234035:14749,14749,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1153,33538,counts,pixel,4.645410104500985,platform_constant,True,H&E,4.645410104500985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441456,,,test,hesrt,samples/GSE234035/GSM7441456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441457,GSE234035+GSE234971,GSE234035,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,13PCW,fetal,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,unknown,not stated,,GSE234035:14749,14749,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1295,33538,counts,pixel,4.668111309690189,platform_constant,True,H&E,4.668111309690189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441457,,,test,hesrt,samples/GSE234035/GSM7441457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7449985,GSE234157+GSE234161,GSE234157,Intratumoral radiation dose heterogeneity augments antitumor immunity in mice and primes responses to checkpoint blockade,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,unknown,luna,,,solid tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Brachytherapy+Immune checkpoint inhibitors,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2733,32589,counts,pixel,4.6492808202079905,platform_constant,True,H&E,4.6492808202079905,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39292804,,GSM7449985,,,train,hesrt,samples/GSE234157/GSM7449985,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.96, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7454042,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,adult,age rule: age with unit,juvenile,7 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1254,32285,counts,pixel,4.0237701493718285,platform_constant,True,H&E,4.0237701493718285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454042,,,val,hesrt,samples/GSE234199/GSM7454042,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454043,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,adult,age rule: age with unit,juvenile,7 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1303,32285,counts,pixel,4.2109221157721555,platform_constant,True,H&E,4.2109221157721555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454043,,,val,hesrt,samples/GSE234199/GSM7454043,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454044,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2400,32285,counts,pixel,4.113747197356425,platform_constant,True,H&E,4.113747197356425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454044,,,val,hesrt,samples/GSE234199/GSM7454044,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454045,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1734,32285,counts,pixel,4.04896354734937,platform_constant,True,H&E,4.04896354734937,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454045,,,val,hesrt,samples/GSE234199/GSM7454045,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454046,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,adult,age rule: age with unit,juvenile,7 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2135,32285,counts,pixel,4.055555596111121,platform_constant,True,H&E,4.055555596111121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454046,,,val,hesrt,samples/GSE234199/GSM7454046,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454047,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,adult,age rule: age with unit,juvenile,7 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1134,32285,counts,pixel,4.111111115222232,platform_constant,True,H&E,4.111111115222232,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454047,,,val,hesrt,samples/GSE234199/GSM7454047,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454048,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2383,32285,counts,pixel,4.129629751866685,platform_constant,True,H&E,4.129629751866685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454048,,,val,hesrt,samples/GSE234199/GSM7454048,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454049,GSE234199,GSE234199,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Fibrotic lung slice,primary tissue,,,disease,luna,lung fibrosis,bleomycin,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1449,32285,counts,pixel,4.1851851483555755,platform_constant,True,H&E,4.1851851483555755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454049,,,val,hesrt,samples/GSE234199/GSM7454049,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7458245,GSE234253,GSE234253,Spatial transcriptomics of mouse spleens during malaria convalescence.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,mondo_predicate,,,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,43892,25412,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38944658,,GSM7458245,,,train,sda-all,samples/GSE234253/GSM7458245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM7458246,GSE234253,GSE234253,Spatial transcriptomics of mouse spleens during malaria convalescence.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,luna,,,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,45130,26397,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38944658,,GSM7458246,,,train,sda-all,samples/GSE234253/GSM7458246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM7458247,GSE234253,GSE234253,Spatial transcriptomics of mouse spleens during malaria convalescence.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,mondo_predicate,,,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,51589,27553,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38944658,,GSM7458247,,,train,sda-all,samples/GSE234253/GSM7458247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM7458248,GSE234253,GSE234253,Spatial transcriptomics of mouse spleens during malaria convalescence.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,mondo_predicate,,,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,45403,25856,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38944658,,GSM7458248,,,train,sda-all,samples/GSE234253/GSM7458248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM7461403,GSE234266,GSE234266,Pharmacological targeting Netrin-1 inhibits EMT in cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0004992,cancer,disease,luna,skin squamous cell carcinoma,Control N/A,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1426,19465,counts,pixel,3.9828948272737175,platform_constant,True,H&E,3.9828948272737175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532929,,GSM7461403,,,train,hesrt,samples/GSE234266/GSM7461403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.79, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7461404,GSE234266,GSE234266,Pharmacological targeting Netrin-1 inhibits EMT in cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0004992,cancer,disease,luna,skin squamous cell carcinoma,NP137 In vivo IP,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1166,19465,counts,pixel,3.9103893304057444,platform_constant,True,H&E,3.9103893304057444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532929,,GSM7461404,,,train,hesrt,samples/GSE234266/GSM7461404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7461435,GSE234271+GSE234272,GSE234271,Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,wound,3 day,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,664,32285,counts,pixel,4.797367889857136,platform_constant,True,H&E,4.797367889857136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39558136,,GSM7461435,,,train,hesrt,samples/GSE234271/GSM7461435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7461436,GSE234271+GSE234272,GSE234271,Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,wound,7 day,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,549,32285,counts,pixel,4.363099562562214,platform_constant,True,H&E,4.363099562562214,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39558136,,GSM7461436,,,train,hesrt,samples/GSE234271/GSM7461436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7461437,GSE234271+GSE234272,GSE234271,Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,wound,14 day,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,697,32285,counts,pixel,4.365048199829281,platform_constant,True,H&E,4.365048199829281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39558136,,GSM7461437,,,train,hesrt,samples/GSE234271/GSM7461437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.55, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7473682,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001159,sigmoid colon,colon,primary tissue,,,normal,luna,healthy (non-IBD),,adult,age rule: bare number read as years,adult,59,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,42636,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473682,,,train,sda-all,samples/GSE234713/GSM7473682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473683,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,colon,primary tissue,,,normal,luna,healthy (non-IBD),,adult,age rule: bare number read as years,adult,61,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,54818,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473683,,,train,sda-all,samples/GSE234713/GSM7473683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473684,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001159,sigmoid colon,colon,primary tissue,,,normal,luna,healthy (non-IBD),,aged,age rule: bare number read as years,aged,69,male,extracted field,male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,31340,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473684,,,train,sda-all,samples/GSE234713/GSM7473684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473685,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001157,transverse colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,ulcerative colitis (UC),,aged,age rule: bare number read as years,aged,69,male,extracted field,male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,50757,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473685,,,train,sda-all,samples/GSE234713/GSM7473685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473686,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001159,sigmoid colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,ulcerative colitis (UC),,adult,age rule: bare number read as years,adult,44,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,78115,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473686,,,train,sda-all,samples/GSE234713/GSM7473686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473687,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001159,sigmoid colon,colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,ulcerative colitis (UC),,adult,age rule: bare number read as years,adult,40,male,extracted field,male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,57436,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473687,,,train,sda-all,samples/GSE234713/GSM7473687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473688,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001159,sigmoid colon,colon,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease (CD),,adult,age rule: bare number read as years,adult,45,male,extracted field,male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,38779,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473688,,,train,sda-all,samples/GSE234713/GSM7473688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7473689,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001157,transverse colon,colon,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease (CD),,adult,age rule: bare number read as years,adult,42,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,72837,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473689,,,train,sda-all,samples/GSE234713/GSM7473689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7473690,GSE234713,GSE234713,IBD CosMx NanoString data from colonic mucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001157,transverse colon,colon,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease (CD),,adult,age rule: bare number read as years,adult,38,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,55559,999,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473690,,,train,sda-all,samples/GSE234713/GSM7473690,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7474504,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2038,26136,counts,pixel,4.283103486331238,platform_constant,True,H&E,4.283103486331238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474504,,,train,hesrt,samples/GSE234774/GSM7474504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474505,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1530,26136,counts,pixel,4.152413990093969,platform_constant,True,H&E,4.152413990093969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474505,,,train,hesrt,samples/GSE234774/GSM7474505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474506,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1155,26136,counts,pixel,4.2396552015614315,platform_constant,True,H&E,4.2396552015614315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474506,,,train,hesrt,samples/GSE234774/GSM7474506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474507,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,740,26136,counts,pixel,4.3475859773440115,platform_constant,True,H&E,4.3475859773440115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474507,,,train,hesrt,samples/GSE234774/GSM7474507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7474508,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3138,26136,counts,pixel,4.258965729763772,platform_constant,True,H&E,4.258965729763772,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474508,,,train,hesrt,samples/GSE234774/GSM7474508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7474509,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1689,26136,counts,pixel,4.3337930859397575,platform_constant,True,H&E,4.3337930859397575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474509,,,train,hesrt,samples/GSE234774/GSM7474509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7474510,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2629,26136,counts,pixel,4.314827663852226,platform_constant,True,H&E,4.314827663852226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474510,,,train,hesrt,samples/GSE234774/GSM7474510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474511,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2603,26136,counts,pixel,4.240000046809596,platform_constant,True,H&E,4.240000046809596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474511,,,train,hesrt,samples/GSE234774/GSM7474511,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474512,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3242,26136,counts,pixel,4.389310163417395,platform_constant,True,H&E,4.389310163417395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474512,,,train,hesrt,samples/GSE234774/GSM7474512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7474513,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3364,26136,counts,pixel,4.277931210177389,platform_constant,True,H&E,4.277931210177389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474513,,,train,hesrt,samples/GSE234774/GSM7474513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474514,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3076,26136,counts,pixel,4.297241196290849,platform_constant,True,H&E,4.297241196290849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474514,,,train,hesrt,samples/GSE234774/GSM7474514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM7474515,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2793,26136,counts,pixel,4.523448441691688,platform_constant,True,H&E,4.523448441691688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474515,,,train,hesrt,samples/GSE234774/GSM7474515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7474516,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2502,26136,counts,pixel,4.326896559079872,platform_constant,True,H&E,4.326896559079872,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474516,,,train,hesrt,samples/GSE234774/GSM7474516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7474517,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2156,26136,counts,pixel,4.180689876330917,platform_constant,True,H&E,4.180689876330917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474517,,,train,hesrt,samples/GSE234774/GSM7474517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM7474518,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2464,26136,counts,pixel,4.1996550445342935,platform_constant,True,H&E,4.1996550445342935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474518,,,train,hesrt,samples/GSE234774/GSM7474518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM7474519,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2439,26136,counts,pixel,4.309310323776608,platform_constant,True,H&E,4.309310323776608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474519,,,train,hesrt,samples/GSE234774/GSM7474519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7474520,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2592,25966,counts,pixel,4.40034508562244,platform_constant,True,H&E,4.40034508562244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474520,,,train,hesrt,samples/GSE234774/GSM7474520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7474521,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2520,25966,counts,pixel,4.234137757688882,platform_constant,True,H&E,4.234137757688882,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474521,,,train,hesrt,samples/GSE234774/GSM7474521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7474522,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2275,25966,counts,pixel,4.40034508562244,platform_constant,True,H&E,4.40034508562244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474522,,,train,hesrt,samples/GSE234774/GSM7474522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7474523,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2433,25966,counts,pixel,4.454137756788609,platform_constant,True,H&E,4.454137756788609,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474523,,,train,hesrt,samples/GSE234774/GSM7474523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7474524,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2638,25966,counts,pixel,4.344137876124564,platform_constant,True,H&E,4.344137876124564,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474524,,,train,hesrt,samples/GSE234774/GSM7474524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.87}",,
GSM7474525,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2856,25966,counts,pixel,4.290344848780499,platform_constant,True,H&E,4.290344848780499,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474525,,,train,hesrt,samples/GSE234774/GSM7474525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7474526,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3084,25966,counts,pixel,4.380344929735834,platform_constant,True,H&E,4.380344929735834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474526,,,train,hesrt,samples/GSE234774/GSM7474526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7474527,GSE234774,GSE234774,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0003038,thoracic spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3068,25966,counts,pixel,4.288275752460634,platform_constant,True,H&E,4.288275752460634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474527,,,train,hesrt,samples/GSE234774/GSM7474527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7476184,GSE234885,GSE234885,Sorafenib inhibits invasion of multicellular organoids that mimic Lymphangioleiomyomatosis nodules.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung Distal Tissue,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,LAM Patient,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3343,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.740261723490048,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40776927,,GSM7476184,,,train,sda-all,samples/GSE234885/GSM7476184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7476185,GSE234885,GSE234885,Sorafenib inhibits invasion of multicellular organoids that mimic Lymphangioleiomyomatosis nodules.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung Distal Tissue,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,LAM Patient,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2595,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.564699907501211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40776927,,GSM7476185,,,train,sda-all,samples/GSE234885/GSM7476185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7497629,GSE235247,GSE235247,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1470,19465,counts,pixel,4.466862545844247,platform_constant,True,H&E,4.466862545844247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497629,,,test,hesrt,samples/GSE235247/GSM7497629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7497630,GSE235247,GSE235247,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,aged,age rule: age with unit,aged,18 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2096,19465,counts,pixel,4.6805898328469775,platform_constant,True,H&E,4.6805898328469775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497630,,,test,hesrt,samples/GSE235247/GSM7497630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7497631,GSE235247,GSE235247,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,adult,age rule: age with unit,juvenile,3 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1627,19465,counts,pixel,4.4146238721223305,platform_constant,True,H&E,4.4146238721223305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497631,,,test,hesrt,samples/GSE235247/GSM7497631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM7497632,GSE235247,GSE235247,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,adult,age rule: age with unit,juvenile,3 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,768,19465,counts,pixel,4.493439879053798,platform_constant,True,H&E,4.493439879053798,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497632,,,test,hesrt,samples/GSE235247/GSM7497632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM7498811,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3947,17943,counts,pixel,3.9267406906117492,platform_constant,True,H&E,3.9267406906117492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498811,,,train,hesrt,samples/GSE235315/GSM7498811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498812,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2248,17943,counts,pixel,3.920592149414351,platform_constant,True,H&E,3.920592149414351,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498812,,,train,hesrt,samples/GSE235315/GSM7498812,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498813,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4373,17943,counts,pixel,3.919623334357401,platform_constant,True,H&E,3.919623334357401,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498813,,,train,hesrt,samples/GSE235315/GSM7498813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7498814,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4649,17943,counts,pixel,3.8947156030376986,platform_constant,True,H&E,3.8947156030376986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498814,,,train,hesrt,samples/GSE235315/GSM7498814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498815,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3168,17943,counts,pixel,3.9205175318703147,platform_constant,True,H&E,3.9205175318703147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498815,,,train,hesrt,samples/GSE235315/GSM7498815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498816,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3582,17943,counts,pixel,3.918178254479015,platform_constant,True,H&E,3.918178254479015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498816,,,train,hesrt,samples/GSE235315/GSM7498816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498817,GSE235315+GSE235452,GSE235315,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,pancreatic cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3468,17943,counts,pixel,3.941995014479929,platform_constant,True,H&E,3.941995014479929,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498817,,,train,hesrt,samples/GSE235315/GSM7498817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7505850,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D10,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1077,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505850,,,train,hesrt,samples/GSE235583/GSM7505850,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7505851,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D10,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1132,33538,counts,pixel,4.66811130969019,platform_constant,True,H&E,4.66811130969019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505851,,,train,hesrt,samples/GSE235583/GSM7505851,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505852,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D10,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1122,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505852,,,train,hesrt,samples/GSE235583/GSM7505852,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7505853,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D10,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,924,33538,counts,pixel,4.660579892372313,platform_constant,True,H&E,4.660579892372313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505853,,,train,hesrt,samples/GSE235583/GSM7505853,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7505854,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D150,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1285,33538,counts,pixel,4.668111309690188,platform_constant,True,H&E,4.668111309690188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505854,,,train,hesrt,samples/GSE235583/GSM7505854,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505855,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D150,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1362,33538,counts,pixel,4.66811130969019,platform_constant,True,H&E,4.66811130969019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505855,,,train,hesrt,samples/GSE235583/GSM7505855,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7505856,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D150,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1301,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505856,,,train,hesrt,samples/GSE235583/GSM7505856,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7505857,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D150,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1323,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505857,,,train,hesrt,samples/GSE235583/GSM7505857,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505858,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D20,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,893,33538,counts,pixel,4.148124603228819,platform_constant,True,H&E,4.148124603228819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505858,,,train,hesrt,samples/GSE235583/GSM7505858,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505859,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D20,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,849,33538,counts,pixel,4.156204623562408,platform_constant,True,H&E,4.156204623562408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505859,,,train,hesrt,samples/GSE235583/GSM7505859,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505860,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D20,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,871,33538,counts,pixel,4.156204623562408,platform_constant,True,H&E,4.156204623562408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505860,,,train,hesrt,samples/GSE235583/GSM7505860,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505861,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D20,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,817,33538,counts,pixel,4.176515177818163,platform_constant,True,H&E,4.176515177818163,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505861,,,train,hesrt,samples/GSE235583/GSM7505861,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7505862,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D35,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,695,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505862,,,train,hesrt,samples/GSE235583/GSM7505862,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505863,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D35,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,935,33538,counts,pixel,4.668111309690213,platform_constant,True,H&E,4.668111309690213,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505863,,,train,hesrt,samples/GSE235583/GSM7505863,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM7505864,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D35,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,864,33538,counts,pixel,4.637129605341747,platform_constant,True,H&E,4.637129605341747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505864,,,train,hesrt,samples/GSE235583/GSM7505864,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7505865,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D35,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,900,33538,counts,pixel,4.6447094393109,platform_constant,True,H&E,4.6447094393109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505865,,,train,hesrt,samples/GSE235583/GSM7505865,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7505866,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D60,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1414,33538,counts,pixel,5.158277191918093,platform_constant,True,H&E,5.158277191918093,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505866,,,train,hesrt,samples/GSE235583/GSM7505866,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505867,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D60,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1921,33538,counts,pixel,5.134275027391687,platform_constant,True,H&E,5.134275027391687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505867,,,train,hesrt,samples/GSE235583/GSM7505867,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM7505868,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D60,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1639,33538,counts,pixel,5.134275027391687,platform_constant,True,H&E,5.134275027391687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505868,,,train,hesrt,samples/GSE235583/GSM7505868,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505869,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D60,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2112,33538,counts,pixel,5.15936521927413,platform_constant,True,H&E,5.15936521927413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505869,,,train,hesrt,samples/GSE235583/GSM7505869,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505870,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D90,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,882,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505870,,,train,hesrt,samples/GSE235583/GSM7505870,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505871,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D90,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1185,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505871,,,train,hesrt,samples/GSE235583/GSM7505871,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505872,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D90,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1279,33538,counts,pixel,4.645410104501006,platform_constant,True,H&E,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505872,,,train,hesrt,samples/GSE235583/GSM7505872,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505873,GSE235583+GSE235585,GSE235583,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000970,eye,organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,D90,unknown,not stated,,GSE235583:AD3,AD3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1088,33538,counts,pixel,4.667126879902778,platform_constant,True,H&E,4.667126879902778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505873,,,train,hesrt,samples/GSE235583/GSM7505873,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7507311,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,adult,age rule: age in years,adult,46 years,male,extracted field,male,GSE235672:Pt1,Pt1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2587,33538,counts,pixel,4.439743652153069,platform_constant,True,H&E,4.439743652153069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507311,,,train,hesrt,samples/GSE235672/GSM7507311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507312,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,Neoadjuvant,adult,age rule: age in years,adult,39 years,male,extracted field,male,GSE235672:Pt2,Pt2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1883,33538,counts,pixel,4.439624515576755,platform_constant,True,H&E,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507312,,,train,hesrt,samples/GSE235672/GSM7507312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507313,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,TMZ+RT,juvenile,age rule: age in years,juvenile,7 years,female,extracted field,female,GSE235672:Pt3,Pt3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1876,33538,counts,pixel,4.439713867109834,platform_constant,True,H&E,4.439713867109834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507313,,,train,hesrt,samples/GSE235672/GSM7507313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507314,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,adult,age rule: age in years,adult,35 years,female,extracted field,female,GSE235672:Pt4,Pt4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2963,33538,counts,pixel,4.441651142699947,platform_constant,True,H&E,4.441651142699947,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507314,,,train,hesrt,samples/GSE235672/GSM7507314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507315,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,adult,age rule: age in years,adult,38 years,female,extracted field,female,GSE235672:Pt5,Pt5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1858,36601,counts,pixel,4.02018583671867,platform_constant,True,H&E,4.02018583671867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507315,,,train,hesrt,samples/GSE235672/GSM7507315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507316,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,"newly_diagnosed, TMZ+RT",adult,age rule: bare number read as years,adult,38,female,extracted field,female,GSE235672:Pt5_Pt7,Pt5_Pt7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2560,33538,counts,pixel,4.439624515576755,platform_constant,True,H&E,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507316,,,train,hesrt,samples/GSE235672/GSM7507316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507317,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,TMZ+RT,adult,age rule: age in years,adult,51 years,male,extracted field,male,GSE235672:Pt6,Pt6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2027,33538,counts,pixel,4.439713867109834,platform_constant,True,H&E,4.439713867109834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507317,,,train,hesrt,samples/GSE235672/GSM7507317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507318,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,TMZ+RT,adult,age rule: age in years,adult,38 years,female,extracted field,female,GSE235672:Pt7,Pt7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1555,36601,counts,pixel,4.020001447488076,platform_constant,True,H&E,4.020001447488076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507318,,,train,hesrt,samples/GSE235672/GSM7507318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507319,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,TMZ+RT,adult,age rule: age in years,adult,37 years,male,extracted field,male,GSE235672:Pt8,Pt8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1733,36601,counts,pixel,4.020185836718651,platform_constant,True,H&E,4.020185836718651,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507319,,,train,hesrt,samples/GSE235672/GSM7507319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7507320,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,adult,age rule: age in years,adult,56 years,male,extracted field,male,GSE235672:Pt9,Pt9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2253,36601,counts,pixel,4.005304033479119,platform_constant,True,H&E,4.005304033479119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507320,,,train,hesrt,samples/GSE235672/GSM7507320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507321,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,"newly_diagnosed, TMZ+RT",adult,luna,adult,,male,extracted field,male,GSE235672:Pt9_Pt8,Pt9_Pt8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2176,33538,counts,pixel,4.439624515576755,platform_constant,True,H&E,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507321,,,train,hesrt,samples/GSE235672/GSM7507321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507322,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,aged,age rule: age in years,aged,67 years,female,extracted field,female,GSE235672:Pt10,Pt10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2494,33538,counts,pixel,4.439743652153069,platform_constant,True,H&E,4.439743652153069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507322,,,train,hesrt,samples/GSE235672/GSM7507322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507323,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,Neoadjuvant,adult,age rule: age in years,adult,50 years,female,extracted field,female,GSE235672:Pt11,Pt11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2499,33538,counts,pixel,4.439624515576755,platform_constant,True,H&E,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507323,,,train,hesrt,samples/GSE235672/GSM7507323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507324,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,TMZ+RT,adult,age rule: age in years,adult,53 years,male,extracted field,male,GSE235672:Pt12,Pt12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1887,33538,counts,pixel,4.439743652153069,platform_constant,True,H&E,4.439743652153069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507324,,,train,hesrt,samples/GSE235672/GSM7507324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507325,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,adult,age rule: age in years,adult,52 years,female,extracted field,female,GSE235672:Pt13,Pt13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2578,33538,counts,pixel,4.441651142699947,platform_constant,True,H&E,4.441651142699947,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507325,,,train,hesrt,samples/GSE235672/GSM7507325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507326,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,newly_diagnosed,aged,age rule: age in years,aged,71 years,male,extracted field,male,GSE235672:Pt14,Pt14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1948,33538,counts,pixel,4.439713867109834,platform_constant,True,H&E,4.439713867109834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507326,,,train,hesrt,samples/GSE235672/GSM7507326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507327,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,Neoadjuvant,adult,age rule: age in years,adult,23 years,male,extracted field,male,GSE235672:Pt15,Pt15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2149,33538,counts,pixel,3.9086965161018665,platform_constant,True,H&E,3.9086965161018665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507327,,,train,hesrt,samples/GSE235672/GSM7507327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507328,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,Neoadjuvant,adult,age rule: age in years,adult,22 years,male,extracted field,male,GSE235672:Pt16,Pt16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2897,33538,counts,pixel,3.9575873943809516,platform_constant,True,H&E,3.9575873943809516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507328,,,train,hesrt,samples/GSE235672/GSM7507328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507329,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,Neoadjuvant,adult,age rule: age in years,adult,45 years,male,extracted field,male,GSE235672:Pt17,Pt17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2320,33538,counts,pixel,3.9560887495996844,platform_constant,True,H&E,3.9560887495996844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507329,,,train,hesrt,samples/GSE235672/GSM7507329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507330,GSE235672+GSE235913,GSE235672,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,Neoadjuvant,adult,age rule: age in years,adult,39 years,female,extracted field,female,GSE235672:Pt18,Pt18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2751,33538,counts,pixel,3.87426118488143,platform_constant,True,H&E,3.87426118488143,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507330,,,train,hesrt,samples/GSE235672/GSM7507330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7508783,GSE235743,GSE235743,Genetic vulnerability to healing reveals a spatially resolved epithelial restitution program,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,distal colon,primary tissue,,,normal,luna,,"Hgfac WT, intact tissues",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,502,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37878672,10.1126/scitranslmed.adg5252,GSM7508783,,,train,hesrt,samples/GSE235743/GSM7508783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM7508784,GSE235743,GSE235743,Genetic vulnerability to healing reveals a spatially resolved epithelial restitution program,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,distal colon,primary tissue,,,perturbation,luna,,"Hgfac WT, day2 wounds",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,640,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37878672,10.1126/scitranslmed.adg5252,GSM7508784,,,train,hesrt,samples/GSE235743/GSM7508784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7508785,GSE235743,GSE235743,Genetic vulnerability to healing reveals a spatially resolved epithelial restitution program,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,distal colon,primary tissue,,,perturbation,luna,,"Hgfac KO, day2 wounds",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,572,32285,counts,pixel,5.492041719326132,platform_constant,True,H&E,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37878672,10.1126/scitranslmed.adg5252,GSM7508785,,,train,hesrt,samples/GSE235743/GSM7508785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7585149,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,clear cell RCC,leading-edge,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 1,patient 1,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2181,54368,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585149,,,train,hesrt,samples/GSE235896/GSM7585149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7585150,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,clear cell RCC,tumor core,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 1,patient 1,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2134,45209,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585150,,,train,hesrt,samples/GSE235896/GSM7585150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585151,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,chromophobe RCC,leading-edge,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 1,patient 1,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2246,53137,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585151,,,train,hesrt,samples/GSE235896/GSM7585151,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7585152,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,chromophobe RCC,tumor core,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 1,patient 1,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,1815,44011,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585152,,,train,hesrt,samples/GSE235896/GSM7585152,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM7585153,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,clear cell RCC,leading-edge,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 3,patient 3,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,1984,51084,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585153,,,train,hesrt,samples/GSE235896/GSM7585153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585154,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,chromophobe RCC,leading-edge,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 2,patient 2,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2091,47818,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585154,,,train,hesrt,samples/GSE235896/GSM7585154,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7585155,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,clear cell RCC,tumor core,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 2,patient 2,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2217,49243,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585155,,,train,hesrt,samples/GSE235896/GSM7585155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585156,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,renal cancers,tumour tissue,,,disease,luna,clear cell RCC,leading-edge,not stated,luna,not stated,,unknown,not stated,,GSE235896:patient 2,patient 2,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2363,51102,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585156,,,train,hesrt,samples/GSE235896/GSM7585156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585157,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,rep2,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,1465,34240,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585157,,,train,hesrt,samples/GSE235896/GSM7585157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585158,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,rep1,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,1710,26736,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585158,,,train,hesrt,samples/GSE235896/GSM7585158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585159,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002421,hippocampal formation,mouse hippocampus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,2450,33018,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585159,,,train,hesrt,samples/GSE235896/GSM7585159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.75, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585160,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,rep1,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,750,37220,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585160,,,train,hesrt,samples/GSE235896/GSM7585160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7585161,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,rep2,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,659,32403,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585161,,,train,hesrt,samples/GSE235896/GSM7585161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7585162,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1078,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM7585162,,,train,sda-all,samples/GSE235896/GSM7585162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7585163,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,cell,47363,16,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM7585163,,,train,sda-all,samples/GSE235896/GSM7585163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7585164,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,cell,41702,16,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM7585164,,,train,sda-all,samples/GSE235896/GSM7585164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585165,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,cell,45654,16,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM7585165,,,train,sda-all,samples/GSE235896/GSM7585165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7585167,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,mouse hemibrain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,spot,2500,40162,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM7585167,,,train,sda-all,samples/GSE235896/GSM7585167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7848719,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,rep3,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,1472,24509,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7848719,,,train,hesrt,samples/GSE235896/GSM7848719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7848720,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,rep3,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,926,43513,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7848720,,,train,hesrt,samples/GSE235896/GSM7848720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7915845,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,761,38917,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7915845,,,train,hesrt,samples/GSE235896/GSM7915845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7915846,GSE235896,GSE235896,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,mouse olfactory bulb,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,Decoder-seq,sequencing-based,Decoder-seq,,,,771,29414,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7915846,,,train,hesrt,samples/GSE235896/GSM7915846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7519181,GSE236171,GSE236171,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Naive control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2968,31053,counts,pixel,3.9896117040372823,platform_constant,True,H&E,3.9896117040372823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7519181,,,val,hesrt,samples/GSE236171/GSM7519181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7519182,GSE236171,GSE236171,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0858950,traumatic brain injury,disease,luna,,TBI 3 dpi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2442,31053,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7519182,,,val,hesrt,samples/GSE236171/GSM7519182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7574423,GSE236171,GSE236171,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0858950,traumatic brain injury,disease,luna,,TBI 6 hpi,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics (legacy),,,spot,813,30609,counts,pixel,1.497472527499345,platform_constant,True,H&E,1.497472527499345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7574423,,,val,hesrt,samples/GSE236171/GSM7574423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7574424,GSE236171,GSE236171,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0858950,traumatic brain injury,disease,luna,,TBI 3 dpi,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics (legacy),,,spot,659,21425,counts,pixel,4.299484818225461,platform_constant,True,H&E,4.299484818225461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7574424,,,val,hesrt,samples/GSE236171/GSM7574424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536059,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1291,32287,counts,pixel,3.956010059923841,platform_constant,True,H&E,3.956010059923841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536059,,,train,hesrt,samples/GSE236424/GSM7536059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536060,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1390,32287,counts,pixel,4.1196444613298935,platform_constant,True,H&E,4.1196444613298935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536060,,,train,hesrt,samples/GSE236424/GSM7536060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536061,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,970,32287,counts,pixel,4.004999578601992,platform_constant,True,H&E,4.004999578601992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536061,,,train,hesrt,samples/GSE236424/GSM7536061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536062,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1033,32287,counts,pixel,4.0214132629789106,platform_constant,True,H&E,4.0214132629789106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536062,,,train,hesrt,samples/GSE236424/GSM7536062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536063,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,984,32287,counts,pixel,4.004999578602001,platform_constant,True,H&E,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536063,,,train,hesrt,samples/GSE236424/GSM7536063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536065,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1250,32287,counts,pixel,4.004999578601992,platform_constant,True,H&E,4.004999578601992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536065,,,train,hesrt,samples/GSE236424/GSM7536065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7536066,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,neonatal or infant,luna,neonatal or infant,Newborn,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,897,32287,counts,pixel,4.004999578602001,platform_constant,True,H&E,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536066,,,train,hesrt,samples/GSE236424/GSM7536066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536067,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1973,32287,counts,pixel,3.9930654990883614,platform_constant,True,H&E,3.9930654990883614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536067,,,train,hesrt,samples/GSE236424/GSM7536067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536068,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2281,32287,counts,pixel,4.048180720832946,platform_constant,True,H&E,4.048180720832946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536068,,,train,hesrt,samples/GSE236424/GSM7536068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536070,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1908,32287,counts,pixel,3.96381902888524,platform_constant,True,H&E,3.96381902888524,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536070,,,train,hesrt,samples/GSE236424/GSM7536070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536071,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1988,32287,counts,pixel,3.910303632666984,platform_constant,True,H&E,3.910303632666984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536071,,,train,hesrt,samples/GSE236424/GSM7536071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536072,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2066,32287,counts,pixel,4.004999578602001,platform_constant,True,H&E,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536072,,,train,hesrt,samples/GSE236424/GSM7536072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7536073,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1258,32287,counts,pixel,4.240475011904763,platform_constant,True,H&E,4.240475011904763,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536073,,,train,hesrt,samples/GSE236424/GSM7536073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7536075,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1397,32287,counts,pixel,4.037574659516483,platform_constant,True,H&E,4.037574659516483,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536075,,,train,hesrt,samples/GSE236424/GSM7536075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536076,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,juvenile,luna,juvenile,Juvenile,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1636,32287,counts,pixel,4.10323041374242,platform_constant,True,H&E,4.10323041374242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536076,,,train,hesrt,samples/GSE236424/GSM7536076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536077,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1168,32287,counts,pixel,4.004999578602001,platform_constant,True,H&E,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536077,,,train,hesrt,samples/GSE236424/GSM7536077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536078,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1196,32287,counts,pixel,4.0214132629789106,platform_constant,True,H&E,4.0214132629789106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536078,,,train,hesrt,samples/GSE236424/GSM7536078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536079,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1170,32287,counts,pixel,4.0214132629789106,platform_constant,True,H&E,4.0214132629789106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536079,,,train,hesrt,samples/GSE236424/GSM7536079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536080,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,LV-transduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1259,32287,counts,pixel,4.037827415129904,platform_constant,True,H&E,4.037827415129904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536080,,,train,hesrt,samples/GSE236424/GSM7536080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536081,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1635,32287,counts,pixel,4.034544380791632,platform_constant,True,H&E,4.034544380791632,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536081,,,train,hesrt,samples/GSE236424/GSM7536081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536082,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1338,32287,counts,pixel,4.076968251989529,platform_constant,True,H&E,4.076968251989529,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536082,,,train,hesrt,samples/GSE236424/GSM7536082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536084,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1147,32287,counts,pixel,4.091109432815779,platform_constant,True,H&E,4.091109432815779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536084,,,train,hesrt,samples/GSE236424/GSM7536084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536085,GSE236424+GSE236425,GSE236424,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Untransduced,adult,luna,adult,Adult,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1532,32287,counts,pixel,4.048685677691475,platform_constant,True,H&E,4.048685677691475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536085,,,train,hesrt,samples/GSE236424/GSM7536085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7567292,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Postmenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:1,1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1449,17943,counts,pixel,4.098105918095102,platform_constant,True,H&E,4.098105918095102,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567292,,,train,hesrt,samples/GSE236660/GSM7567292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7567293,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Perimenopause,adult,luna,adult,,unknown,not stated,,GSE236660:7,7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3498,17943,counts,pixel,4.032342740978702,platform_constant,True,H&E,4.032342740978702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567293,,,train,hesrt,samples/GSE236660/GSM7567293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM7567294,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Postmenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:13,13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2266,17943,counts,pixel,4.019847941415007,platform_constant,True,H&E,4.019847941415007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567294,,,train,hesrt,samples/GSE236660/GSM7567294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM7567295,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Postmenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:14,14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3333,17943,counts,pixel,4.015935041371487,platform_constant,True,H&E,4.015935041371487,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567295,,,train,hesrt,samples/GSE236660/GSM7567295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM7567296,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Postmenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:15,15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2270,17943,counts,pixel,4.071585233904576,platform_constant,True,H&E,4.071585233904576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567296,,,train,hesrt,samples/GSE236660/GSM7567296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM7567297,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Perimenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:17,17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2109,17943,counts,pixel,4.03332587668454,platform_constant,True,H&E,4.03332587668454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567297,,,train,hesrt,samples/GSE236660/GSM7567297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM7567298,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Perimenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:18,18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3555,17943,counts,pixel,3.9942814538060425,platform_constant,True,H&E,3.9942814538060425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567298,,,train,hesrt,samples/GSE236660/GSM7567298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM7567299,GSE236660,GSE236660,Effect of Aging on the Human Myometrium at Single-Cell Resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,,,normal,luna,,Postmenopause,not stated,luna,not stated,,unknown,not stated,,GSE236660:20,20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2685,17943,counts,pixel,4.0037969866788865,platform_constant,True,H&E,4.0037969866788865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567299,,,train,hesrt,samples/GSE236660/GSM7567299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM7567492,GSE236681,GSE236681,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,liver,luna,UBERON:0002107,liver,Liver metastatic breast tumor,xenograft,MONDO:0024883;MONDO:0007254,metastatic neoplasm;breast cancer,disease,luna,,NOD scid gamma,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1937,116124,counts,um,1.0,verified,True,H&E-like (heuristic),4.211124347484764,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35259269,,GSM7567492,,,train,sda-all,samples/GSE236681/GSM7567492,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.30000000000000004, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM7567493,GSE236681,GSE236681,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,liver,luna,UBERON:0002107,liver,Liver metastatic breast tumor,metastasis,MONDO:0024883;MONDO:0007254,metastatic neoplasm;breast cancer,disease,luna,,NOD scid gamma,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1287,116124,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.218801681952232,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35259269,,GSM7567493,,,train,sda-all,samples/GSE236681/GSM7567493,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.36, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",sample_kind,low_confidence_annotation
GSM7567494,GSE236681,GSE236681,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,liver,luna,UBERON:0002107,liver,Liver metastatic breast tumor,metastasis,MONDO:0024883;MONDO:0007254,metastatic neoplasm;breast cancer,disease,luna,,Fulvestrant,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3522,116124,counts,um,1.0,verified,True,H&E-like (heuristic),4.234185084736351,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35259269,,GSM7567494,,,train,sda-all,samples/GSE236681/GSM7567494,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM7567495,GSE236681,GSE236681,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,liver,luna,UBERON:0002107,liver,Liver metastatic breast tumor,metastasis,MONDO:0024883;MONDO:0007254,metastatic neoplasm;breast cancer,disease,luna,,Fulvestrant,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3720,116124,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.219225837004199,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain needs to be confirmed,35259269,,GSM7567495,,,train,sda-all,samples/GSE236681/GSM7567495,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.74, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7573205,GSE236698,GSE236698,Mucinous colorectal adenocarcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,tumour tissue,MONDO:0005008,colorectal adenocarcinoma,disease,luna,mucinous colorectal adenocarinoma,tumor + normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3602,36601,counts,pixel,4.150120981234191,platform_constant,True,H&E,4.150120981234191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38778448,,GSM7573205,,,test,hesrt,samples/GSE236698/GSM7573205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8286350,GSE236698,GSE236698,Mucinous colorectal adenocarcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,mucinous colorectal adenocarinoma,normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1725,18085,counts,pixel,3.8819090836503287,platform_constant,True,H&E,3.8819090836503287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38778448,,GSM8286350,,,test,hesrt,samples/GSE236698/GSM8286350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,normal_but_disease_text
GSM7580115,GSE236890,GSE236890,Longitudinal spatial transcriptomics of murine T cell transfer colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,CD45RBhi transfer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3848,32285,counts,um,1.0,verified,True,H&E,5.107762138834163,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580115,,,train,sda-all,samples/GSE236890/GSM7580115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7580116,GSE236890,GSE236890,Longitudinal spatial transcriptomics of murine T cell transfer colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,CD45RBhi transfer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3749,32285,counts,um,1.0,verified,True,H&E,5.097461099224352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580116,,,train,sda-all,samples/GSE236890/GSM7580116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7580117,GSE236890,GSE236890,Longitudinal spatial transcriptomics of murine T cell transfer colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,CD45RBhi transfer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4398,32285,counts,um,1.0,verified,True,H&E,5.0968515779971835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580117,,,train,sda-all,samples/GSE236890/GSM7580117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM7580118,GSE236890,GSE236890,Longitudinal spatial transcriptomics of murine T cell transfer colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,CD45RBhi transfer + anti-IL12p40,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4072,32285,counts,um,1.0,verified,True,H&E,5.108122084813728,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580118,,,train,sda-all,samples/GSE236890/GSM7580118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM7589541,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,naive,adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3144,32285,counts,pixel,0.37865479493105764,platform_constant,True,H&E,0.5000074689440399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589541,,,train,hesrt,samples/GSE236963/GSM7589541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589543,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,naive,adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2648,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.5000049586646902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589543,,,train,hesrt,samples/GSE236963/GSM7589543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589544,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,naive,adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2580,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.49999369382785425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589544,,,train,hesrt,samples/GSE236963/GSM7589544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589545,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,naive,adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2881,32285,counts,pixel,0.37874440740668464,platform_constant,True,H&E,0.49999882543228236,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589545,,,train,hesrt,samples/GSE236963/GSM7589545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589546,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,naive,adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3024,32285,counts,pixel,0.37874440740668464,platform_constant,True,H&E,0.5000078716589326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589546,,,train,hesrt,samples/GSE236963/GSM7589546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589548,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3070,32285,counts,pixel,0.37865479493105764,platform_constant,True,H&E,0.5000010802007053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589548,,,train,hesrt,samples/GSE236963/GSM7589548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589549,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2477,32285,counts,pixel,0.37865479493105764,platform_constant,True,H&E,0.5000010802007053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589549,,,train,hesrt,samples/GSE236963/GSM7589549,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589550,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2460,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.4999912862309797,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589550,,,train,hesrt,samples/GSE236963/GSM7589550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589551,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2501,32285,counts,pixel,0.37761399409016205,platform_constant,True,H&E,0.5000025402810795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589551,,,train,hesrt,samples/GSE236963/GSM7589551,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7589553,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2791,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.500000945310501,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589553,,,train,hesrt,samples/GSE236963/GSM7589553,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7589554,GSE236963,GSE236963,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),adult,age rule: age with unit,not stated,7–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2804,32285,counts,pixel,0.37874440740668464,platform_constant,True,H&E,0.49999246747447823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589554,,,train,hesrt,samples/GSE236963/GSM7589554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7594569,GSE237086,GSE237086,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Mecp2 KO/+,adult,age rule: age with unit,adult,8-10-week,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,226657,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM7594569,,,train,sda-all,samples/GSE237086/GSM7594569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7594570,GSE237086,GSE237086,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Mecp2 KO/+,adult,age rule: age with unit,adult,8-10-week,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,223562,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM7594570,,,train,sda-all,samples/GSE237086/GSM7594570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7594571,GSE237086,GSE237086,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Mecp2 KO/+,adult,age rule: age with unit,adult,8-10-week,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,127853,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM7594571,,,train,sda-all,samples/GSE237086/GSM7594571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7594572,GSE237086,GSE237086,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Mecp2 KO/+,adult,age rule: age with unit,adult,8-10-week,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,113701,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM7594572,,,train,sda-all,samples/GSE237086/GSM7594572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7594573,GSE237086,GSE237086,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,8-10-week,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,110542,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM7594573,,,train,sda-all,samples/GSE237086/GSM7594573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7595667,GSE237119,GSE237119,Red blood cells-heme-exposure and tumor-associated macrophage identity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,unknown,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,anti-CD40 treated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2188,15295,counts,pixel,7.1679774239447305,platform_constant,True,H&E,7.1679774239447305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38060331,,GSM7595667,,,train,hesrt,samples/GSE237119/GSM7595667,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7595668,GSE237119,GSE237119,Red blood cells-heme-exposure and tumor-associated macrophage identity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,unknown,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,anti-CD40 treated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2186,13916,counts,pixel,7.295908988485231,platform_constant,True,H&E,7.295908988485231,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38060331,,GSM7595668,,,train,hesrt,samples/GSE237119/GSM7595668,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7596587,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,unannotated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2397,33538,counts,pixel,16.539701565210255,platform_constant,True,H&E,16.539701565210255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596587,,,test,hesrt,samples/GSE237183/GSM7596587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596588,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,infiltrating,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1387,33538,counts,pixel,13.315960839301303,platform_constant,True,H&E,13.315960839301303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596588,,,test,hesrt,samples/GSE237183/GSM7596588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596589,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,T1 contrast-enhancing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2792,33538,counts,pixel,13.409946533937832,platform_constant,True,H&E,13.409946533937832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596589,,,test,hesrt,samples/GSE237183/GSM7596589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596590,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,bulk,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2199,33538,counts,pixel,15.033867500268697,platform_constant,True,H&E,15.033867500268697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596590,,,test,hesrt,samples/GSE237183/GSM7596590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596591,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,infiltrating,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1280,33538,counts,pixel,13.782014446254985,platform_constant,True,H&E,13.782014446254985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596591,,,test,hesrt,samples/GSE237183/GSM7596591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596592,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,T1 contrast-enhancing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2780,33538,counts,pixel,13.673494509636729,platform_constant,True,H&E,13.673494509636729,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596592,,,test,hesrt,samples/GSE237183/GSM7596592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596593,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,infiltrating,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1436,33538,counts,pixel,14.886070747525958,platform_constant,True,H&E,14.886070747525958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596593,,,test,hesrt,samples/GSE237183/GSM7596593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596594,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,necrotic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,955,33538,counts,pixel,14.97185567923029,platform_constant,True,H&E,14.97185567923029,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596594,,,test,hesrt,samples/GSE237183/GSM7596594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596595,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,infiltrating,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1726,33538,counts,pixel,14.593005062132269,platform_constant,True,H&E,14.593005062132269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596595,,,test,hesrt,samples/GSE237183/GSM7596595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596596,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,T1 contrast-enhancing,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1112,33538,counts,pixel,14.598819232040878,platform_constant,True,H&E,14.598819232040878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596596,,,test,hesrt,samples/GSE237183/GSM7596596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596597,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,1a,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2486,33538,counts,pixel,15.028053663234306,platform_constant,True,H&E,15.028053663234306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596597,,,test,hesrt,samples/GSE237183/GSM7596597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596598,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,1b,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2595,33538,counts,pixel,15.032898344639849,platform_constant,True,H&E,15.032898344639849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596598,,,test,hesrt,samples/GSE237183/GSM7596598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596599,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,2,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2343,33538,counts,pixel,15.029690936060733,platform_constant,True,H&E,15.029690936060733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596599,,,test,hesrt,samples/GSE237183/GSM7596599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596600,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,glioblastoma,bwh23,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,965,33538,counts,pixel,14.693002002102968,platform_constant,True,H&E,14.693002002102968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-05164fc8edb1,cross_gse_redeposit,GSM9902434,test,hesrt,samples/GSE237183/GSM7596600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596601,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0019781;MONDO:0016680,astrocytoma (excluding glioblastoma);high grade astrocytic tumor,disease,luna,glioblastoma,bwh24,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3105,33538,counts,pixel,14.697675171125592,platform_constant,True,H&E,14.697675171125592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-f16c46bb5f15,cross_gse_redeposit,GSM9902421,test,hesrt,samples/GSE237183/GSM7596601,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596602,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0019781;MONDO:0016680,astrocytoma (excluding glioblastoma);high grade astrocytic tumor,disease,luna,glioblastoma,bwh25,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2607,33538,counts,pixel,16.377906290109205,platform_constant,True,H&E,16.377906290109205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-c68a244ffa56,cross_gse_redeposit,GSM9902422,test,hesrt,samples/GSE237183/GSM7596602,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596603,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,glioblastoma,bwh28,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2637,33538,counts,pixel,14.686992167057598,platform_constant,True,H&E,14.686992167057598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-9fad8b8c9ac8,cross_gse_redeposit,GSM9902423,test,hesrt,samples/GSE237183/GSM7596603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7596604,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,glioblastoma,bwh35,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1300,33538,counts,pixel,16.539701565210287,platform_constant,True,H&E,16.539701565210287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-3b0fa05bbde9,cross_gse_redeposit,GSM9902435,test,hesrt,samples/GSE237183/GSM7596604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596605,GSE237183,GSE237183,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,human glioblastoma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,glioblastoma,mgh259,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3464,33538,counts,pixel,14.866927844536432,platform_constant,True,H&E,14.866927844536432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-ce0e109a5c67,cross_gse_redeposit,GSM9902437,test,hesrt,samples/GSE237183/GSM7596605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7605371,GSE237308,GSE237308,Three-dimensional molecular architecture of mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,embryonic day 13.5,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1577,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37524711,,GSM7605371,,,train,sda-all,samples/GSE237308/GSM7605371,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7605372,GSE237308,GSE237308,Three-dimensional molecular architecture of mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,embryonic day 13.5,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1407,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37524711,,GSM7605372,,,train,sda-all,samples/GSE237308/GSM7605372,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.71, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7605373,GSE237308,GSE237308,Three-dimensional molecular architecture of mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,embryonic day 13.5,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1768,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37524711,,GSM7605373,,,train,sda-all,samples/GSE237308/GSM7605373,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7605374,GSE237308,GSE237308,Three-dimensional molecular architecture of mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,embryonic day 13.5,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1651,31053,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,37524711,,GSM7605374,,,train,sda-all,samples/GSE237308/GSM7605374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7648699,GSE237771+GSE237772,GSE237771,Epithelial-Immune Metabolic Codependency Fuels Inflammatory Disease [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0021166,inflammatory disease,disease,luna,psoriasis,Post-Treatment Lesional,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,378,36601,counts,pixel,4.560778082574235,platform_constant,True,H&E,4.560778082574235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38772365,,GSM7648699,,,train,hesrt,samples/GSE237771/GSM7648699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7648700,GSE237771+GSE237772,GSE237771,Epithelial-Immune Metabolic Codependency Fuels Inflammatory Disease [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,MONDO:0021166,inflammatory disease,disease,mondo_predicate (Luna: perturbation),psoriasis,Post-Treatment Non-Lesional,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,276,36601,counts,pixel,4.39089229525017,platform_constant,True,H&E,4.39089229525017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38772365,,GSM7648700,,,train,hesrt,samples/GSE237771/GSM7648700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.46, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7657717,GSE238004,GSE238004,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,909,68886,counts,pixel,4.019425893704697,platform_constant,True,H&E,4.019425893704697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657717,,,train,hesrt,samples/GSE238004/GSM7657717,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7657718,GSE238004,GSE238004,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1255,68886,counts,pixel,4.083002127805329,platform_constant,True,H&E,4.083002127805329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657718,,,train,hesrt,samples/GSE238004/GSM7657718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7657719,GSE238004,GSE238004,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1223,68886,counts,pixel,4.03355418778957,platform_constant,True,H&E,4.03355418778957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657719,,,train,hesrt,samples/GSE238004/GSM7657719,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7657720,GSE238004,GSE238004,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1098,68886,counts,pixel,4.04061788949363,platform_constant,True,H&E,4.04061788949363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657720,,,train,hesrt,samples/GSE238004/GSM7657720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7659430,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 10,patient 10,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1432,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM7659430,,,train,sda-all,samples/GSE238145/GSM7659430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7659431,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 1,patient 1,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,699,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM7659431,,,train,sda-all,samples/GSE238145/GSM7659431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171241,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 2,patient 2,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13475,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171241,,,train,sda-all,samples/GSE238145/GSM8171241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171242,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 3,patient 3,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7431,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171242,,,train,sda-all,samples/GSE238145/GSM8171242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171243,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 4,patient 4,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10913,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171243,,,train,sda-all,samples/GSE238145/GSM8171243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171244,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2062,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171244,,,train,sda-all,samples/GSE238145/GSM8171244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171245,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 7,patient 7,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11215,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171245,,,train,sda-all,samples/GSE238145/GSM8171245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171246,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 8,patient 8,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10621,18660,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171246,,,train,sda-all,samples/GSE238145/GSM8171246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171247,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE238145:patient 9,patient 9,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12686,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171247,,,train,sda-all,samples/GSE238145/GSM8171247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171248,GSE238145,GSE238145,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bladder,luna,UBERON:0001255,urinary bladder,FFPE bladder tumor,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2448,18660,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38656869,,GSM8171248,,,train,sda-all,samples/GSE238145/GSM8171248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661256,GSE238264,GSE238264,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2766,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.050527878810616,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain needs to be confirmed,37723590,,GSM7661256,,,test,sda-all,samples/GSE238264/GSM7661256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661257,GSE238264,GSE238264,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2170,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.026500871970528,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain needs to be confirmed,37723590,,GSM7661257,,,test,sda-all,samples/GSE238264/GSM7661257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661258,GSE238264,GSE238264,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3002,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.993536413188702,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661258,,,test,sda-all,samples/GSE238264/GSM7661258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661259,GSE238264,GSE238264,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1320,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.9573557720855534,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661259,,,test,sda-all,samples/GSE238264/GSM7661259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661260,GSE238264,GSE238264,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2575,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.026418922831429,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661260,,,test,sda-all,samples/GSE238264/GSM7661260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661261,GSE238264,GSE238264,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,cabozantinib+nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2453,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.1346332713570835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661261,,,test,sda-all,samples/GSE238264/GSM7661261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7679867,GSE240015,GSE240015,Age-related epithelial defects limit thymic function and regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,untreated,adult,age rule: age with unit,adult,2 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3010,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39112630,,GSM7679867,,,train,hesrt,samples/GSE240015/GSM7679867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM7679868,GSE240015,GSE240015,Age-related epithelial defects limit thymic function and regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,untreated,aged,age rule: age with unit,aged,18 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1392,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39112630,,GSM7679868,,,train,hesrt,samples/GSE240015/GSM7679868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7681545,GSE240102+GSE240107,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1357,49822,counts,um,1.0,verified,False,,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,UNSURE,,,,,GSM7681545,,,train,sda-all,samples/GSE240102/GSM7681545,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM7681546,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2087,49822,counts,pixel,3.884114799089389,platform_constant,True,H&E,3.884114799089389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681546,,,test,hesrt,samples/GSE240102/GSM7681546,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": NaN, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM7681547,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2054,49822,counts,pixel,3.8975544820484447,platform_constant,True,H&E,3.8975544820484447,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681547,,,test,hesrt,samples/GSE240102/GSM7681547,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": NaN, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM7681548,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1932,49822,counts,pixel,3.884114799089372,platform_constant,True,H&E,3.884114799089372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681548,,,test,hesrt,samples/GSE240102/GSM7681548,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": NaN, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM7681549,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2506,94448,counts,pixel,3.8707903383699764,platform_constant,True,H&E,3.8707903383699764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681549,,,test,hesrt,samples/GSE240102/GSM7681549,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": NaN, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM7681550,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2657,94448,counts,pixel,3.857511586154025,platform_constant,True,H&E,3.857511586154025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681550,,,test,hesrt,samples/GSE240102/GSM7681550,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": NaN, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM7681551,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2844,94448,counts,pixel,3.884114799089389,platform_constant,True,H&E,3.884114799089389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681551,,,test,hesrt,samples/GSE240102/GSM7681551,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": NaN, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7681552,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2360,94448,counts,pixel,3.884114799089372,platform_constant,True,H&E,3.884114799089372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681552,,,test,hesrt,samples/GSE240102/GSM7681552,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": NaN, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM7681553,GSE240102+GSE240107,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1733,94448,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,UNSURE,,,,,GSM7681553,,,train,sda-all,samples/GSE240102/GSM7681553,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": NaN, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM7681554,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1512,94448,counts,pixel,3.900244997569857,platform_constant,True,H&E,3.900244997569857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681554,,,test,hesrt,samples/GSE240102/GSM7681554,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM7681555,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1782,94448,counts,pixel,3.900244997569866,platform_constant,True,H&E,3.900244997569866,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681555,,,test,hesrt,samples/GSE240102/GSM7681555,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": NaN, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM7681556,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,perturbation,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1808,94448,counts,pixel,3.900244997569857,platform_constant,True,H&E,3.900244997569857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681556,,,test,hesrt,samples/GSE240102/GSM7681556,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM7681557,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1920,94448,counts,pixel,3.8993612095189434,platform_constant,True,H&E,3.8993612095189434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681557,,,test,hesrt,samples/GSE240102/GSM7681557,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.77}",,
GSM7681558,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2217,94448,counts,pixel,3.899361209518926,platform_constant,True,H&E,3.899361209518926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681558,,,test,hesrt,samples/GSE240102/GSM7681558,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.86}",,
GSM7681559,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1836,94448,counts,pixel,3.899361209518943,platform_constant,True,H&E,3.899361209518943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681559,,,test,hesrt,samples/GSE240102/GSM7681559,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM7681560,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1948,94448,counts,pixel,3.900244997569874,platform_constant,True,H&E,3.900244997569874,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681560,,,test,hesrt,samples/GSE240102/GSM7681560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.92}",,
GSM7681561,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1655,94448,counts,pixel,3.900775558934123,platform_constant,True,H&E,3.900775558934123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681561,,,test,hesrt,samples/GSE240102/GSM7681561,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.93}",,
GSM7681562,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1559,94448,counts,pixel,3.900775558934123,platform_constant,True,H&E,3.900775558934123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681562,,,test,hesrt,samples/GSE240102/GSM7681562,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.73}",,
GSM7681563,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1453,94448,counts,pixel,3.8758972395932374,platform_constant,True,H&E,3.8758972395932374,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681563,,,test,hesrt,samples/GSE240102/GSM7681563,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7681564,GSE240102,GSE240102,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,Medicago truncatula,3880,barrel medic,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,plant,luna,,,root,primary tissue,,,normal,luna,,not inoculated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1400,94448,counts,pixel,3.883768465932773,platform_constant,True,H&E,3.883768465932773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681564,,,test,hesrt,samples/GSE240102/GSM7681564,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.88}",,
GSM7689279,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Untreated,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,75538,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689279,,,train,sda-all,samples/GSE240271/GSM7689279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7689280,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,75094,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689280,,,train,sda-all,samples/GSE240271/GSM7689280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7689281,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG+hCG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,77202,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689281,,,train,sda-all,samples/GSE240271/GSM7689281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7689282,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG+hCG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,74090,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689282,,,train,sda-all,samples/GSE240271/GSM7689282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7689283,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG+hCG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,75703,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689283,,,train,sda-all,samples/GSE240271/GSM7689283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7689284,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG+hCG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,76849,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689284,,,train,sda-all,samples/GSE240271/GSM7689284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7689285,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG+hCG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,77826,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689285,,,train,sda-all,samples/GSE240271/GSM7689285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7689286,GSE240271,GSE240271,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,perturbation,luna,,PMSG+hCG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,74794,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689286,,,train,sda-all,samples/GSE240271/GSM7689286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7708218,GSE240715,GSE240715,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (E13.5),primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1196,32285,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708218,,,train,sda-all,samples/GSE240715/GSM7708218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7708219,GSE240715,GSE240715,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (E13.5),primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1152,32285,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708219,,,train,sda-all,samples/GSE240715/GSM7708219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7708220,GSE240715,GSE240715,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (E13.5),primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,984,32285,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708220,,,train,sda-all,samples/GSE240715/GSM7708220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7708221,GSE240715,GSE240715,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (E13.5),primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1266,32285,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708221,,,train,sda-all,samples/GSE240715/GSM7708221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7710356,GSE240843,GSE240843,Spatial transcriptomic data of a lymph node from an individual with Multicentric Castleman Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,MONDO:0035838;MONDO:0019754,idiopathic multicentric Castleman disease;multicentric Castleman disease,disease,luna,Idiopathic Multicentric Castleman Disease,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,33303,28978,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,38170173,,GSM7710356,,,train,sda-all,samples/GSE240843/GSM7710356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7717016,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,Skin,adult,age rule: bare number read as years,adult,22,female,extracted field,female,GSE241124:Donor4,Donor4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,880,36600,counts,pixel,4.185861709362106,platform_constant,True,H&E,4.185861709362106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717016,,,train,hesrt,samples/GSE241124/GSM7717016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.54, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7717017,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 1,adult,age rule: bare number read as years,adult,22,female,extracted field,female,GSE241124:Donor4,Donor4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1745,36600,counts,pixel,4.185880309733614,platform_constant,True,H&E,4.185880309733614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717017,,,train,hesrt,samples/GSE241124/GSM7717017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7717018,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 7,adult,age rule: bare number read as years,adult,22,female,extracted field,female,GSE241124:Donor4,Donor4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1334,36600,counts,pixel,4.1786880967760025,platform_constant,True,H&E,4.1786880967760025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717018,,,train,hesrt,samples/GSE241124/GSM7717018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.58, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7717019,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 30,adult,age rule: bare number read as years,adult,22,female,extracted field,female,GSE241124:Donor4,Donor4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1996,36600,counts,pixel,4.185880309733634,platform_constant,True,H&E,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717019,,,train,hesrt,samples/GSE241124/GSM7717019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238462,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,Skin,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor1,Donor1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1382,36600,counts,pixel,4.097665189012112,platform_constant,True,H&E,4.097665189012112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238462,,,train,hesrt,samples/GSE241124/GSM8238462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.52, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8238463,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 1,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor1,Donor1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2050,36600,counts,pixel,4.141726391299105,platform_constant,True,H&E,4.141726391299105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238463,,,train,hesrt,samples/GSE241124/GSM8238463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238464,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 7,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor1,Donor1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1802,36600,counts,pixel,4.141726391299106,platform_constant,True,H&E,4.141726391299106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238464,,,train,hesrt,samples/GSE241124/GSM8238464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238465,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 30,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor1,Donor1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1354,36600,counts,pixel,4.141769333406583,platform_constant,True,H&E,4.141769333406583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238465,,,train,hesrt,samples/GSE241124/GSM8238465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238466,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,Skin,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE241124:Donor2,Donor2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,914,36600,counts,pixel,4.185880309733634,platform_constant,True,H&E,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238466,,,train,hesrt,samples/GSE241124/GSM8238466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 0.56, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8238467,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 1,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE241124:Donor2,Donor2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1901,36600,counts,pixel,4.185886509912559,platform_constant,True,H&E,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238467,,,train,hesrt,samples/GSE241124/GSM8238467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238468,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 7,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE241124:Donor2,Donor2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1953,36600,counts,pixel,4.185886509912559,platform_constant,True,H&E,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238468,,,train,hesrt,samples/GSE241124/GSM8238468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238469,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 30,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE241124:Donor2,Donor2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2364,36600,counts,pixel,4.185886509912559,platform_constant,True,H&E,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238469,,,train,hesrt,samples/GSE241124/GSM8238469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8238470,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,Skin,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor3,Donor3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,793,36600,counts,pixel,4.185880309733634,platform_constant,True,H&E,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238470,,,train,hesrt,samples/GSE241124/GSM8238470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238471,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 1,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor3,Donor3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1507,36600,counts,pixel,4.185880309733634,platform_constant,True,H&E,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238471,,,train,hesrt,samples/GSE241124/GSM8238471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238472,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 7,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor3,Donor3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1749,36600,counts,pixel,4.178688096775992,platform_constant,True,H&E,4.178688096775992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238472,,,train,hesrt,samples/GSE241124/GSM8238472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.66, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238473,GSE241124,GSE241124,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,day 30,adult,age rule: bare number read as years,adult,24,male,extracted field,male,GSE241124:Donor3,Donor3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2245,36600,counts,pixel,4.185880309733594,platform_constant,True,H&E,4.185880309733594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238473,,,train,hesrt,samples/GSE241124/GSM8238473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM7727540,GSE241346,GSE241346,"A Proteomic Atlas of Atherosclerosis: The Contribution of Proteoglycans to Sex Differences, Plaque Phenotypes and Outcomes",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,Carotid plaque tissue,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1165,17943,counts,pixel,4.559430057370092,platform_constant,True,H&E,4.559430057370092,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37646165,,GSM7727540,,,train,hesrt,samples/GSE241346/GSM7727540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM7748222,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Female brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,3–4 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1947,34325,counts,pixel,4.806267426377738,platform_constant,True,H&E,4.806267426377738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748222,,,train,hesrt,samples/GSE242058/GSM7748222,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7748223,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Female brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,3–4 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1848,34325,counts,pixel,4.806650803960589,platform_constant,True,H&E,4.806650803960589,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748223,,,train,hesrt,samples/GSE242058/GSM7748223,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM7748224,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Female brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,3–4 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2411,34325,counts,pixel,4.792851104214434,platform_constant,True,H&E,4.792851104214434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748224,,,train,hesrt,samples/GSE242058/GSM7748224,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM7748225,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Female brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,3–4 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2108,34325,counts,pixel,4.787849039422877,platform_constant,True,H&E,4.787849039422877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748225,,,train,hesrt,samples/GSE242058/GSM7748225,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 0.98}",,
GSM7748226,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Male brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,3–4 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2152,34325,counts,pixel,4.782612533907777,platform_constant,True,H&E,4.782612533907777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748226,,,train,hesrt,samples/GSE242058/GSM7748226,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 0.73}",,
GSM7748227,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Male brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,3–4 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2442,34325,counts,pixel,4.805116757501321,platform_constant,True,H&E,4.805116757501321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748227,,,train,hesrt,samples/GSE242058/GSM7748227,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7748228,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Male brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,GSE242058:Male3,Male3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1937,34325,counts,pixel,4.8183190175913255,platform_constant,True,H&E,4.8183190175913255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748228,,,train,hesrt,samples/GSE242058/GSM7748228,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5700000000000001, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM7748229,GSE242058,GSE242058,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0001898,hypothalamus,Male brain section containing the medial hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,GSE242058:Male4,Male4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2759,34325,counts,pixel,4.793233742494125,platform_constant,True,H&E,4.793233742494125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748229,,,train,hesrt,samples/GSE242058/GSM7748229,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7755670,GSE242214,GSE242214,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,neonatal or infant,age rule: postnatal day,neonatal or infant,6 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2176,32285,counts,pixel,0.8849211017394925,platform_constant,True,H&E,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM7755670,,,val,hesrt,samples/GSE242214/GSM7755670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7755671,GSE242214,GSE242214,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,neonatal or infant,age rule: postnatal day,neonatal or infant,12 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3269,32285,counts,pixel,0.8849211017394925,platform_constant,True,H&E,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM7755671,,,val,hesrt,samples/GSE242214/GSM7755671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9405376,GSE242214,GSE242214,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,neonatal or infant,age rule: postnatal day,neonatal or infant,6 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2134,32285,counts,pixel,0.4405243598534552,platform_constant,True,H&E,0.4999935504603813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405376,,,val,hesrt,samples/GSE242214/GSM9405376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9405377,GSE242214,GSE242214,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,neonatal or infant,age rule: postnatal day,neonatal or infant,12 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2794,32285,counts,pixel,0.4424605508697462,platform_constant,True,H&E,0.4999964046644229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405377,,,val,hesrt,samples/GSE242214/GSM9405377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9405378,GSE242214,GSE242214,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: postnatal day,adult,60 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3521,32285,counts,pixel,0.4424605508697462,platform_constant,True,H&E,0.5000059982371987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405378,,,val,hesrt,samples/GSE242214/GSM9405378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM9405379,GSE242214,GSE242214,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: postnatal day,adult,60 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2900,32285,counts,pixel,0.4424605508697462,platform_constant,True,H&E,0.5000123957299578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405379,,,val,hesrt,samples/GSE242214/GSM9405379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM7757059,GSE242249,GSE242249,Spatial transcriptomic profiles of prostate tissue obtained from a patient diagnosed with benign prostatic hyperplasia (BPH).,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,MONDO:0010811,benign prostatic hyperplasia,disease,luna,benign prostatic hyperplasia,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2945,36601,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38654277,,GSM7757059,,,val,sda-all,samples/GSE242249/GSM7757059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7757569,GSE242270,GSE242270,Spatiotemporal immune atlas of a clinical-grade gene-edited pig-to-human kidney xenotransplant,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4443,41918,counts,pixel,4.38536605977072,platform_constant,True,H&E,4.38536605977072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38605083,10.1038/s41467-024-47454-7,GSM7757569,,,train,hesrt,samples/GSE242270/GSM7757569,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757970,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2830,17943,counts,pixel,4.097613285302035,platform_constant,True,H&E,4.097613285302035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757970,,,train,hesrt,samples/GSE242311/GSM7757970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757971,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2185,17943,counts,pixel,4.049361670416401,platform_constant,True,H&E,4.049361670416401,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757971,,,train,hesrt,samples/GSE242311/GSM7757971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7757972,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1505,17943,counts,pixel,4.022059681751519,platform_constant,True,H&E,4.022059681751519,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757972,,,train,hesrt,samples/GSE242311/GSM7757972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757973,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2420,17943,counts,pixel,4.000703304897205,platform_constant,True,H&E,4.000703304897205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757973,,,train,hesrt,samples/GSE242311/GSM7757973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757974,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2276,17943,counts,pixel,3.975879183877807,platform_constant,True,H&E,3.975879183877807,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757974,,,train,hesrt,samples/GSE242311/GSM7757974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757975,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3210,17943,counts,pixel,4.0000000224,platform_constant,True,H&E,4.0000000224,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757975,,,train,hesrt,samples/GSE242311/GSM7757975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757976,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2622,17943,counts,pixel,3.9835185843037886,platform_constant,True,H&E,3.9835185843037886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757976,,,train,hesrt,samples/GSE242311/GSM7757976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757977,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2707,17943,counts,pixel,4.0450895438572845,platform_constant,True,H&E,4.0450895438572845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757977,,,train,hesrt,samples/GSE242311/GSM7757977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757978,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2753,17943,counts,pixel,4.091079192487779,platform_constant,True,H&E,4.091079192487779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757978,,,train,hesrt,samples/GSE242311/GSM7757978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757979,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2166,17943,counts,pixel,3.9566282505812675,platform_constant,True,H&E,3.9566282505812675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757979,,,train,hesrt,samples/GSE242311/GSM7757979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7757980,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2305,17943,counts,pixel,3.9566282505812675,platform_constant,True,H&E,3.9566282505812675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757980,,,train,hesrt,samples/GSE242311/GSM7757980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7757981,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3127,17943,counts,pixel,4.109676113913455,platform_constant,True,H&E,4.109676113913455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757981,,,train,hesrt,samples/GSE242311/GSM7757981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757982,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2440,17943,counts,pixel,3.961905904816689,platform_constant,True,H&E,3.961905904816689,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757982,,,train,hesrt,samples/GSE242311/GSM7757982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757983,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2670,17943,counts,pixel,3.9410471057851293,platform_constant,True,H&E,3.9410471057851293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757983,,,train,hesrt,samples/GSE242311/GSM7757983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757984,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2885,17943,counts,pixel,4.015577677063346,platform_constant,True,H&E,4.015577677063346,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757984,,,train,hesrt,samples/GSE242311/GSM7757984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757985,GSE242311,GSE242311,Spatial heterogeneity of integrins and their ligands in primary breast tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,"anthracyclines, taxanes",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3275,17943,counts,pixel,4.015829266504713,platform_constant,True,H&E,4.015829266504713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757985,,,train,hesrt,samples/GSE242311/GSM7757985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759698,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3594,33538,counts,pixel,0.8522452146352486,platform_constant,True,H&E,0.8522452146352486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759698,,,train,hesrt,samples/GSE242352/GSM7759698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759699,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4029,36601,counts,pixel,0.34965034965034963,platform_constant,True,H&E,0.5000052671405922,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759699,,,train,hesrt,samples/GSE242352/GSM7759699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759700,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3611,36601,counts,pixel,0.8620369344188775,platform_constant,True,H&E,0.8620369344188775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759700,,,train,hesrt,samples/GSE242352/GSM7759700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759701,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2640,36601,counts,pixel,0.8549194682417608,platform_constant,True,H&E,0.8549194682417608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759701,,,train,hesrt,samples/GSE242352/GSM7759701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759702,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1879,36601,counts,pixel,0.8620689655172413,platform_constant,True,H&E,0.8620689655172413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759702,,,train,hesrt,samples/GSE242352/GSM7759702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759703,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2416,36601,counts,pixel,0.8620369344188775,platform_constant,True,H&E,0.8620369344188775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759703,,,train,hesrt,samples/GSE242352/GSM7759703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759704,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0021042,glioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2624,36601,counts,pixel,0.8620689655172413,platform_constant,True,H&E,0.8620689655172413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759704,,,train,hesrt,samples/GSE242352/GSM7759704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7759705,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3567,36601,counts,pixel,0.8620369344188775,platform_constant,True,H&E,0.8620369344188775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759705,,,train,hesrt,samples/GSE242352/GSM7759705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759706,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3666,36601,counts,pixel,0.6451478638678313,platform_constant,True,H&E,0.6451478638678313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759706,,,train,hesrt,samples/GSE242352/GSM7759706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7759707,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2439,36601,counts,pixel,0.6451612903225806,platform_constant,True,H&E,0.6451612903225806,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759707,,,train,hesrt,samples/GSE242352/GSM7759707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7759708,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3108,36601,counts,pixel,0.6451478638678313,platform_constant,True,H&E,0.6451478638678313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759708,,,train,hesrt,samples/GSE242352/GSM7759708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513873,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2028,18085,counts,pixel,0.3845130131210745,platform_constant,True,H&E,0.5000136346732048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513873,,,train,hesrt,samples/GSE242352/GSM8513873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513874,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3535,18085,counts,pixel,0.3846125398585985,platform_constant,True,H&E,0.5000030735611136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513874,,,train,hesrt,samples/GSE242352/GSM8513874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513875,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1298,18085,counts,pixel,0.3846125398585985,platform_constant,True,H&E,0.5000008144589078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513875,,,train,hesrt,samples/GSE242352/GSM8513875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513877,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4891,18085,counts,pixel,0.38461538461538464,platform_constant,True,H&E,0.4999887110248132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513877,,,train,hesrt,samples/GSE242352/GSM8513877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513879,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4473,18085,counts,pixel,0.38456987608009957,platform_constant,True,H&E,0.49999727710138214,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,40514380,,GSM8513879,,,train,hesrt,samples/GSE242352/GSM8513879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8513880,GSE242352,GSE242352,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,glioma,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2642,18085,counts,pixel,0.3846125398585985,platform_constant,True,H&E,0.49999630181617805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513880,,,train,hesrt,samples/GSE242352/GSM8513880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7764368,GSE242471,GSE242471,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,Mycobacterium abscessus infection,chronic_infected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3452,19467,counts,pixel,0.630405287987515,platform_constant,True,H&E,0.630405287987515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM7764368,,,train,hesrt,samples/GSE242471/GSM7764368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7764369,GSE242471,GSE242471,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,normal,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2938,19467,counts,pixel,0.6296882928849031,platform_constant,True,H&E,0.6296882928849031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM7764369,,,train,hesrt,samples/GSE242471/GSM7764369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8067258,GSE242471,GSE242471,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,Mycobacterium abscessus infection,chronic_infected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2875,19467,counts,pixel,0.7200897203181807,platform_constant,True,H&E,0.7200897203181807,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM8067258,,,train,hesrt,samples/GSE242471/GSM8067258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8067259,GSE242471,GSE242471,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,normal,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2438,19467,counts,pixel,0.7195585612751749,platform_constant,True,H&E,0.7195585612751749,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM8067259,,,train,hesrt,samples/GSE242471/GSM8067259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7777520,GSE243022,GSE243022,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer lesion,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,HER2,aged,age rule: bare number read as years,aged,89,unknown,not stated,,GSE243022:Patient A1,Patient A1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1333,36601,counts,pixel,4.802680391435082,platform_constant,True,H&E,4.802680391435082,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777520,,,train,hesrt,samples/GSE243022/GSM7777520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7777521,GSE243022,GSE243022,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer lesion,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,Triple negqtive,aged,age rule: bare number read as years,aged,79,unknown,not stated,,GSE243022:Patient B1,Patient B1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,757,36601,counts,pixel,4.786035131808357,platform_constant,True,H&E,4.786035131808357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777521,,,train,hesrt,samples/GSE243022/GSM7777521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7777522,GSE243022,GSE243022,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer lesion,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,Luminal-HER2,adult,age rule: bare number read as years,adult,52,unknown,not stated,,GSE243022:Patient C1,Patient C1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,642,36601,counts,pixel,4.812213486373137,platform_constant,True,H&E,4.812213486373137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777522,,,train,hesrt,samples/GSE243022/GSM7777522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7777523,GSE243022,GSE243022,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Breast cancer lesion,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,Luminal,adult,age rule: bare number read as years,adult,56,unknown,not stated,,GSE243022:Patient D1,Patient D1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,849,36601,counts,pixel,4.784896049400421,platform_constant,True,H&E,4.784896049400421,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777523,,,train,hesrt,samples/GSE243022/GSM7777523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779544,GSE243120,GSE243120,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,,adult,age rule: age with unit,adult,9.5 months,unknown,not stated,,GSE243120:Animal 1,Animal 1,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,73802,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38937583,,GSM7779544,,,train,sda-all,samples/GSE243120/GSM7779544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779545,GSE243120,GSE243120,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,,adult,age rule: age with unit,adult,9.5 months,unknown,not stated,,GSE243120:Animal 1,Animal 1,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,68782,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38937583,,GSM7779545,,,train,sda-all,samples/GSE243120/GSM7779545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779546,GSE243120,GSE243120,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,,adult,age rule: age with unit,adult,9.5 months,unknown,not stated,,GSE243120:Animal 2,Animal 2,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,62742,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38937583,,GSM7779546,,,train,sda-all,samples/GSE243120/GSM7779546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779547,GSE243120,GSE243120,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,,adult,age rule: age with unit,adult,9.5 months,unknown,not stated,,GSE243120:Animal 2,Animal 2,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,59368,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38937583,,GSM7779547,,,train,sda-all,samples/GSE243120/GSM7779547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779548,GSE243120,GSE243120,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,,adult,age rule: age with unit,adult,9.5 months,unknown,not stated,,GSE243120:Animal 3,Animal 3,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,73194,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38937583,,GSM7779548,,,train,sda-all,samples/GSE243120/GSM7779548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779847,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2853,31053,counts,pixel,4.361077457132238,platform_constant,True,H&E,4.361077457132238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779847,,,train,hesrt,samples/GSE243140/GSM7779847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779848,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2940,31053,counts,pixel,4.343204516132813,platform_constant,True,H&E,4.343204516132813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779848,,,train,hesrt,samples/GSE243140/GSM7779848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM7779849,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3051,31053,counts,pixel,4.361077457132239,platform_constant,True,H&E,4.361077457132239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779849,,,train,hesrt,samples/GSE243140/GSM7779849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779850,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2694,31053,counts,pixel,4.343204516132824,platform_constant,True,H&E,4.343204516132824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779850,,,train,hesrt,samples/GSE243140/GSM7779850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779851,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2990,31053,counts,pixel,4.4777044567347115,platform_constant,True,H&E,4.4777044567347115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779851,,,train,hesrt,samples/GSE243140/GSM7779851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779852,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3168,31053,counts,pixel,4.438679270805428,platform_constant,True,H&E,4.438679270805428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779852,,,train,hesrt,samples/GSE243140/GSM7779852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7779853,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3019,31053,counts,pixel,4.477704456734717,platform_constant,True,H&E,4.477704456734717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779853,,,train,hesrt,samples/GSE243140/GSM7779853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7779854,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3124,31053,counts,pixel,4.438679270805411,platform_constant,True,H&E,4.438679270805411,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779854,,,train,hesrt,samples/GSE243140/GSM7779854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7779855,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3181,31053,counts,pixel,4.361077457132238,platform_constant,True,H&E,4.361077457132238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779855,,,train,hesrt,samples/GSE243140/GSM7779855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779856,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2661,31053,counts,pixel,4.343204516132824,platform_constant,True,H&E,4.343204516132824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779856,,,train,hesrt,samples/GSE243140/GSM7779856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779857,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3145,31053,counts,pixel,4.343204516132813,platform_constant,True,H&E,4.343204516132813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779857,,,train,hesrt,samples/GSE243140/GSM7779857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7779858,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2599,31053,counts,pixel,4.36107745713226,platform_constant,True,H&E,4.36107745713226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779858,,,train,hesrt,samples/GSE243140/GSM7779858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779859,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2785,31053,counts,pixel,4.479124565562172,platform_constant,True,H&E,4.479124565562172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779859,,,train,hesrt,samples/GSE243140/GSM7779859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779860,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2517,31053,counts,pixel,4.36107745713226,platform_constant,True,H&E,4.36107745713226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779860,,,train,hesrt,samples/GSE243140/GSM7779860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779861,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3006,31053,counts,pixel,4.361077457132239,platform_constant,True,H&E,4.361077457132239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779861,,,train,hesrt,samples/GSE243140/GSM7779861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779862,GSE243140,GSE243140,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002812,left cerebral hemisphere,left hemisphere mice brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3329,31053,counts,pixel,4.8970490842826315,platform_constant,True,H&E,4.8970490842826315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779862,,,train,hesrt,samples/GSE243140/GSM7779862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7780155,GSE243168+GSE243280,GSE243168,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,,tumour tissue,MONDO:0007254,breast cancer,disease,luna,Breast Cancer,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Breast Cancer Tumor Microenvironment,xenium-1.4.0.6,cell,142272,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38114474,,GSM7780155,,,test,sda-all,samples/GSE243168/GSM7780155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7780296,GSE243179,GSE243179,Clonal proliferation of smooth muscle cell in human atherosclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,coronary sample with plaque erosion,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,atherosclerosis,plaque erosion,adult,age rule: bare number read as years,adult,42,female,extracted field,female,GSE243179:SI-TS-A1,SI-TS-A1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2615,17943,counts,pixel,4.302083344088542,platform_constant,True,H&E,4.302083344088542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37881937,,GSM7780296,,,train,hesrt,samples/GSE243179/GSM7780296,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7780297,GSE243179,GSE243179,Clonal proliferation of smooth muscle cell in human atherosclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,coronary sample with plaque erosion,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,atherosclerosis,plaque erosion,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE243179:SI-TS-D1,SI-TS-D1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1283,17943,counts,pixel,4.279166818149175,platform_constant,True,H&E,4.279166818149175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37881937,,GSM7780297,,,train,hesrt,samples/GSE243179/GSM7780297,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7781044,GSE243225,GSE243225,Multi-species atlas resolves an axolotl limb development and regeneration paradox,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002386,forelimb zeugopod,5 dpa regenerating lower arm,primary tissue,,,perturbation,luna,,CZ lower arm amputation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1089,99088,non-integer,pixel,4.5280104056157375,platform_constant,True,H&E,4.5280104056157375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37816738,,SS-GSM7781044,same_section_cross_series,GSM9788643,train,hesrt,samples/GSE243225/GSM7781044,sda-tissue-disease-2.4,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM7782699,GSE243275,GSE243275,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [scRNA-seq and Visium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,5 µm section Breast Cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4992,18085,counts,pixel,0.5494173770805822,platform_constant,True,H&E,0.5494173770805822,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38114474,,GSM7782699,,,train,hesrt,samples/GSE243275/GSM7782699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7780153,GSE243280,GSE243280,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,5 µm section Breast Cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,167780,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38114474,,GSM7780153,,,train,hesrt,samples/GSE243280/GSM7780153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7780154,GSE243280,GSE243280,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,5 µm section Breast Cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,118752,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38114474,,GSM7780154,,,train,hesrt,samples/GSE243280/GSM7780154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7782914,GSE243291,GSE243291,Spatial transcriptomics reveal signatures of histopathological changes in muscular sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,granulomatous myositis associated with multisystemic sarcoidosis,granulomatous myositis associated with multisystemic sarcoidosis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2299,17943,counts,pixel,4.027631874575545,platform_constant,True,H&E,4.027631874575545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38067175,,GSM7782914,,,train,hesrt,samples/GSE243291/GSM7782914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM7782915,GSE243291,GSE243291,Spatial transcriptomics reveal signatures of histopathological changes in muscular sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,MONDO:0019338,sarcoidosis,disease,luna,granulomatous myositis associated with multisystemic sarcoidosis,granulomatous myositis associated with multisystemic sarcoidosis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2723,17943,counts,pixel,4.071052512663497,platform_constant,True,H&E,4.071052512663497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38067175,,GSM7782915,,,train,hesrt,samples/GSE243291/GSM7782915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM7784328,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-negative CHB (EN2) and HBsAg loss (SL1),Untreated (EN2) and on-treatment (SL1),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1158,36601,counts,pixel,4.096000083886091,platform_constant,True,H&E,4.096000083886091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784328,,,train,hesrt,samples/GSE243367/GSM7784328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7784329,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-negative CHB (EN3 and EN4),Untreated (EN2 and EN4),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1928,36601,counts,pixel,4.1520000724108765,platform_constant,True,H&E,4.1520000724108765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784329,,,train,hesrt,samples/GSE243367/GSM7784329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7784330,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive (EP1) and HBeAg-negative chronic HBV infection(EN1),Untreated (EP1 and EN1),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1471,36601,counts,pixel,4.12800003434497,platform_constant,True,H&E,4.12800003434497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784330,,,train,hesrt,samples/GSE243367/GSM7784330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7784331,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive CHB (EP2) and HBsAg loss (SL2),Untreated (EP2) and on-treatment (SL2),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1742,36601,counts,pixel,4.184000107445121,platform_constant,True,H&E,4.184000107445121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784331,,,train,hesrt,samples/GSE243367/GSM7784331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7784332,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive CHB (EP3) and HBeAg-negative CHB (EN5),Untreated (EP3 and EN5),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1274,36601,counts,pixel,4.0065655493499674,platform_constant,True,H&E,4.0065655493499674,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784332,,,train,hesrt,samples/GSE243367/GSM7784332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7784333,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive CHB (EP4) and HBsAg loss (SL3),Untreated (EP4 and SL3),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2091,36601,counts,pixel,3.9517674766106574,platform_constant,True,H&E,3.9517674766106574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784333,,,train,hesrt,samples/GSE243367/GSM7784333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7784334,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive CHB (OT1) and HBeAg-negative CHB (OT2),On-treatment (OT1 and OT2),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1213,36601,counts,pixel,3.9585860831168653,platform_constant,True,H&E,3.9585860831168653,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784334,,,train,hesrt,samples/GSE243367/GSM7784334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7784335,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive CHB (OT3) and HBeAg-negative CHB (OT4),On-treatment (OT3 and OT4),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1872,36601,counts,pixel,4.157575699170121,platform_constant,True,H&E,4.157575699170121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784335,,,train,hesrt,samples/GSE243367/GSM7784335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7784336,GSE243367,GSE243367,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005344,hepatitis B virus infection,disease,luna,HBeAg-positive CHB (OT6) and HBeAg-negative CHB (OT5),On-treatment (OT5 and OT6),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1574,36601,counts,pixel,4.0580809109937475,platform_constant,True,H&E,4.0580809109937475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784336,,,train,hesrt,samples/GSE243367/GSM7784336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7697868,GSE243981,GSE243981,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,,,normal,luna,,,adult,luna,adult,30–60,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2378,36601,counts,pixel,3.9119879663623887,platform_constant,True,H&E,3.9119879663623887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7697868,,,train,hesrt,samples/GSE243981/GSM7697868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7697869,GSE243981,GSE243981,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,,,normal,luna,,,adult,luna,adult,30–60,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2349,36601,counts,pixel,3.927033572384386,platform_constant,True,H&E,3.927033572384386,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7697869,,,train,hesrt,samples/GSE243981/GSM7697869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7697870,GSE243981,GSE243981,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,,,normal,luna,,,adult,luna,adult,30–60,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2277,36601,counts,pixel,3.9568206443315925,platform_constant,True,H&E,3.9568206443315925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7697870,,,train,hesrt,samples/GSE243981/GSM7697870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7804884,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E14.5,primary tissue,,,normal,luna,,control,embryonic,age rule: embryonic day,embryonic,14.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,815,19465,counts,pixel,4.392517514500182,platform_constant,True,H&E,4.392517514500182,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804884,,,val,hesrt,samples/GSE244014/GSM7804884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804885,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E14.5,primary tissue,,,normal,luna,,control,embryonic,age rule: embryonic day,embryonic,14.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,842,19465,counts,pixel,4.392541189910771,platform_constant,True,H&E,4.392541189910771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804885,,,val,hesrt,samples/GSE244014/GSM7804885,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804886,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E14.5,primary tissue,,,normal,luna,,control,embryonic,age rule: embryonic day,embryonic,14.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,703,19465,counts,pixel,4.525966943520554,platform_constant,True,H&E,4.525966943520554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804886,,,val,hesrt,samples/GSE244014/GSM7804886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804887,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E18.5,primary tissue,,,normal,luna,,control,embryonic,age rule: embryonic day,embryonic,18.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3478,19465,counts,pixel,4.924658848722915,platform_constant,True,H&E,4.924658848722915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804887,,,val,hesrt,samples/GSE244014/GSM7804887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804888,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E18.5,primary tissue,,,normal,luna,,control,embryonic,age rule: embryonic day,embryonic,18.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2527,19465,counts,pixel,4.933223912915328,platform_constant,True,H&E,4.933223912915328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804888,,,val,hesrt,samples/GSE244014/GSM7804888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM7804889,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E14.5,primary tissue,,,perturbation,luna,,CaV1.1 -/-,embryonic,age rule: embryonic day,embryonic,14.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,904,19465,counts,pixel,4.391688413083719,platform_constant,True,H&E,4.391688413083719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804889,,,val,hesrt,samples/GSE244014/GSM7804889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804890,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E18.5,primary tissue,,,perturbation,luna,,CaV1.1 -/-,embryonic,age rule: embryonic day,embryonic,18.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1336,19465,counts,pixel,4.530111545340243,platform_constant,True,H&E,4.530111545340243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804890,,,val,hesrt,samples/GSE244014/GSM7804890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804891,GSE244014,GSE244014,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001103,diaphragm,diaphragm E18.5,primary tissue,,,perturbation,luna,,bCat cKO,embryonic,age rule: embryonic day,embryonic,18.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2166,19465,counts,pixel,4.531492751773592,platform_constant,True,H&E,4.531492751773592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804891,,,val,hesrt,samples/GSE244014/GSM7804891,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7806336,GSE244084,GSE244084,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adrenal Gland,primary tissue,,,normal,luna,,normal,adult,age rule: age in years,adult,31 years,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1073,36601,counts,pixel,0.4716981132075472,platform_constant,True,H&E,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806336,,,train,hesrt,samples/GSE244084/GSM7806336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7806337,GSE244084,GSE244084,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adrenal Gland,primary tissue,,,normal,luna,,normal,adult,age rule: age in years,adult,31 years,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,739,36601,counts,pixel,0.4716981132075472,platform_constant,True,H&E,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806337,,,train,hesrt,samples/GSE244084/GSM7806337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7806338,GSE244084,GSE244084,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adrenal Gland,primary tissue,,,normal,luna,,normal,adult,age rule: age in years,adult,31 years,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1488,36601,counts,pixel,0.4716981132075472,platform_constant,True,H&E,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806338,,,train,hesrt,samples/GSE244084/GSM7806338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7806339,GSE244084,GSE244084,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adrenal Gland,primary tissue,,,normal,luna,,normal,aged,age rule: age in years,aged,71 years,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,938,36601,counts,pixel,0.4716981132075472,platform_constant,True,H&E,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806339,,,train,hesrt,samples/GSE244084/GSM7806339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7818789,GSE244536,GSE244536,Deterministic reprogramming of neutrophils in tumors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4410,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.031861960080278,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain should be stated,38207030,,GSM7818789,,,test,sda-all,samples/GSE244536/GSM7818789,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 0.71}",,
GSM7818790,GSE244536,GSE244536,Deterministic reprogramming of neutrophils in tumors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4653,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.036343811594965,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),registration is correct; should be marked as non-H&E,38207030,,GSM7818790,,,test,sda-all,samples/GSE244536/GSM7818790,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 0.74}",organ,low_confidence_annotation
GSM7818791,GSE244536,GSE244536,Deterministic reprogramming of neutrophils in tumors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3402,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.037730886127165,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),registration is correct; the non-H&E modality should be stated,38207030,,GSM7818791,,,test,sda-all,samples/GSE244536/GSM7818791,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM7818792,GSE244536,GSE244536,Deterministic reprogramming of neutrophils in tumors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4225,32285,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,UNSURE,other,very poor image quality,38207030,,GSM7818792,,,test,sda-all,samples/GSE244536/GSM7818792,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 0.9500000000000001}",,
GSM7823010,GSE244641,GSE244641,Recirculating regulatory T cells mediate thymic regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,treatment: untreated; time point: day1; age: 02-month old,adult,age rule: age with unit,adult,2 months,unknown,not stated,,GSE244641:GSM7823010,GSM7823010,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1625,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823010,,,train,hesrt,samples/GSE244641/GSM7823010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7823011,GSE244641,GSE244641,Recirculating regulatory T cells mediate thymic regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,treatment: untreated; time point: day1; age: 18-month old,aged,age rule: age with unit,aged,18 months,unknown,not stated,,GSE244641:GSM7823011,GSM7823011,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1815,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823011,,,train,hesrt,samples/GSE244641/GSM7823011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7823012,GSE244641+GSE244674,GSE244641,Recirculating regulatory T cells mediate thymic regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,untreated,adult,age rule: age with unit,adult,02-month old,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,841,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.079163847879598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39892391,,GSM7823012,,,train,sda-all,samples/GSE244641/GSM7823012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7823013,GSE244641,GSE244641,Recirculating regulatory T cells mediate thymic regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,treatment: untreated; time point: day4; age: 18-month old,aged,age rule: age with unit,aged,18 months,unknown,not stated,,GSE244641:GSM7823013,GSM7823013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1613,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823013,,,train,hesrt,samples/GSE244641/GSM7823013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7823014,GSE244641,GSE244641,Recirculating regulatory T cells mediate thymic regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,treatment: untreated; time point: day7; age: 02-month old,adult,age rule: age with unit,adult,2 months,unknown,not stated,,GSE244641:GSM7823014,GSM7823014,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1612,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823014,,,train,hesrt,samples/GSE244641/GSM7823014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7823015,GSE244641,GSE244641,Recirculating regulatory T cells mediate thymic regeneration [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,treatment: untreated; time point: day7; age: 18-month old,aged,age rule: age with unit,aged,18 months,unknown,not stated,,GSE244641:GSM7823015,GSM7823015,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1443,32285,counts,pixel,0.970873786407767,platform_constant,True,H&E,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823015,,,train,hesrt,samples/GSE244641/GSM7823015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7823248,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1243,31053,counts,pixel,0.4659375412662524,platform_constant,True,H&E,0.5000044359891271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823248,,,train,hesrt,samples/GSE244650/GSM7823248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7823249,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1035,31053,counts,pixel,0.4673690398864138,platform_constant,True,H&E,0.4999942354791313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823249,,,train,hesrt,samples/GSE244650/GSM7823249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7823250,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1290,31053,counts,pixel,0.467439281380087,platform_constant,True,H&E,0.49999422517116493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823250,,,train,hesrt,samples/GSE244650/GSM7823250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM7823251,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1616,31053,counts,pixel,0.4672122667052516,platform_constant,True,H&E,0.49998595588176503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823251,,,train,hesrt,samples/GSE244650/GSM7823251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7823252,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1642,31053,counts,pixel,0.4656404298486533,platform_constant,True,H&E,0.5000028126831603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823252,,,train,hesrt,samples/GSE244650/GSM7823252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM7823253,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2146,31053,counts,pixel,0.46824394478694786,platform_constant,True,H&E,0.49999813383161945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823253,,,train,hesrt,samples/GSE244650/GSM7823253,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7823254,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1225,31053,counts,pixel,0.46685329959823757,platform_constant,True,H&E,0.5000040424593418,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823254,,,train,hesrt,samples/GSE244650/GSM7823254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7823255,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1312,31053,counts,pixel,0.47341307049202275,platform_constant,True,H&E,0.5000027404461999,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823255,,,train,hesrt,samples/GSE244650/GSM7823255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM7823256,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1053,31053,counts,pixel,0.46836746365911786,platform_constant,True,H&E,0.4999942315294803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823256,,,train,hesrt,samples/GSE244650/GSM7823256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7823257,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,913,31053,counts,pixel,0.4676297604809965,platform_constant,True,H&E,0.5000150100322324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823257,,,train,hesrt,samples/GSE244650/GSM7823257,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7823258,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1009,31053,counts,pixel,0.46709242349140306,platform_constant,True,H&E,0.49999807478060887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823258,,,train,hesrt,samples/GSE244650/GSM7823258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7823259,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1431,31053,counts,pixel,0.471669192002209,platform_constant,True,H&E,0.499997217087131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823259,,,train,hesrt,samples/GSE244650/GSM7823259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM7823260,GSE244650,GSE244650,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Apex resection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1626,31053,counts,pixel,0.46794545208201044,platform_constant,True,H&E,0.5000099095406314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823260,,,train,hesrt,samples/GSE244650/GSM7823260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM7823491,GSE244659,GSE244659,A diverse network of pericoerulear neurons control arousal states,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Mouse brain LC region,primary tissue,,,normal,luna,,wildtype,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh Frozen,Other,release v3,Pixel-seq,sequencing-based,other,,,cell,59200,27561,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40335695,,GSM7823491,,,train,sda-all,samples/GSE244659/GSM7823491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM7823492,GSE244659,GSE244659,A diverse network of pericoerulear neurons control arousal states,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Mouse brain LC region,primary tissue,,,normal,luna,,wildtype,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh Frozen,Other,release v3,Pixel-seq,sequencing-based,other,,,cell,17963,27561,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40335695,,GSM7823492,,,train,sda-all,samples/GSE244659/GSM7823492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM7825036,GSE244723,GSE244723,Spatial transcriptomics reveals expression of novel genes during the remodelling of the embryonic human heart,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0000948,heart,embryonic heart,primary tissue,,,normal,luna,,control,embryonic,age rule: Carnegie stage,embryonic,CS16,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,37,57486,counts,pixel,3.637241489832318,platform_constant,True,H&E,3.637241489832318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38011284,,GSM7825036,,,train,hesrt,samples/GSE244723/GSM7825036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7825037,GSE244723,GSE244723,Spatial transcriptomics reveals expression of novel genes during the remodelling of the embryonic human heart,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0000948,heart,embryonic heart,primary tissue,,,normal,luna,,control,embryonic,age rule: Carnegie stage,embryonic,CS16,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,61,57486,counts,pixel,3.5858299684584076,platform_constant,True,H&E,3.5858299684584076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38011284,,GSM7825037,,,train,hesrt,samples/GSE244723/GSM7825037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM7825038,GSE244723,GSE244723,Spatial transcriptomics reveals expression of novel genes during the remodelling of the embryonic human heart,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0000948,heart,embryonic heart,primary tissue,,,normal,luna,,control,embryonic,age rule: Carnegie stage,embryonic,CS16,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,59,57486,counts,pixel,3.534890945650585,platform_constant,True,H&E,3.534890945650585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38011284,,GSM7825038,,,train,hesrt,samples/GSE244723/GSM7825038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM7825039,GSE244723,GSE244723,Spatial transcriptomics reveals expression of novel genes during the remodelling of the embryonic human heart,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0000948,heart,embryonic heart,primary tissue,,,normal,luna,,control,embryonic,age rule: Carnegie stage,embryonic,CS16,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,60,57486,counts,pixel,3.649330911960079,platform_constant,True,H&E,3.649330911960079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38011284,,GSM7825039,,,train,hesrt,samples/GSE244723/GSM7825039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7829909,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,saline control,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,42666,22019,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829909,,,train,sda-all,samples/GSE244803/GSM7829909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM7829910,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,saline control,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,45840,22555,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829910,,,train,sda-all,samples/GSE244803/GSM7829910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM7829911,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,saline control,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,50181,22455,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829911,,,train,sda-all,samples/GSE244803/GSM7829911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM7829912,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,saline control,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,46304,22195,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829912,,,train,sda-all,samples/GSE244803/GSM7829912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM7829913,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,luna,,P chabaudi infected,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,37750,25727,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829913,,,train,sda-all,samples/GSE244803/GSM7829913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM7829914,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,luna,,P chabaudi infected,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,47385,25795,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829914,,,train,sda-all,samples/GSE244803/GSM7829914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7829915,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,luna,,P chabaudi infected,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,49514,26043,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829915,,,train,sda-all,samples/GSE244803/GSM7829915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM7829916,GSE244803,GSE244803,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005136,malaria,disease,luna,,P chabaudi infected,adult,age rule: age with unit,juvenile,6-12 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,46705,25078,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38848213,,GSM7829916,,,train,sda-all,samples/GSE244803/GSM7829916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM7836297,GSE245097+GSE245179,GSE245097,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0000043,tendon,Tendon + injured area,primary tissue,,,perturbation,luna,,Control (TrkA WT),adult,age rule: age with unit,adult,12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3047,32285,counts,pixel,18.287499981712457,platform_constant,True,H&E,18.287499981712457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836297,,,train,hesrt,samples/GSE245097/GSM7836297,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836298,GSE245097+GSE245179,GSE245097,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0000043,tendon,Tendon + injured area,primary tissue,,,disease,luna,,Control (TrkA WT),adult,age rule: age with unit,adult,12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2027,32285,counts,pixel,18.287499981712457,platform_constant,True,H&E,18.287499981712457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836298,,,train,hesrt,samples/GSE245097/GSM7836298,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM7836299,GSE245097+GSE245179,GSE245097,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0000043,tendon,Tendon + injured area,primary tissue,,,perturbation,luna,,1NMPP1 (TrkA F592A),adult,age rule: age with unit,adult,12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2837,32285,counts,pixel,18.287499981712457,platform_constant,True,H&E,18.287499981712457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836299,,,train,hesrt,samples/GSE245097/GSM7836299,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836300,GSE245097+GSE245179,GSE245097,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0000043,tendon,Tendon + injured area,primary tissue,,,perturbation,luna,,1NMPP1 (TrkA F592A),adult,age rule: age with unit,adult,12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2751,32285,counts,pixel,18.287499981712482,platform_constant,True,H&E,18.287499981712482,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836300,,,train,hesrt,samples/GSE245097/GSM7836300,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836929,GSE245111+GSE245112,GSE245111,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0002524,mediastinal lymph node,Mediastinal lymph node,primary tissue,,,perturbation,luna,,House dust mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,39721,24649,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38374265,,GSM7836929,,,train,sda-all,samples/GSE245111/GSM7836929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836930,GSE245111+GSE245112,GSE245111,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0002524,mediastinal lymph node,Mediastinal lymph node,primary tissue,,,disease,luna,,House dust mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,30242,25343,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38374265,,GSM7836930,,,train,sda-all,samples/GSE245111/GSM7836930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836931,GSE245111+GSE245112,GSE245111,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0002524,mediastinal lymph node,Mediastinal lymph node,primary tissue,,,perturbation,luna,,House dust mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,55186,22391,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38374265,,GSM7836931,,,train,sda-all,samples/GSE245111/GSM7836931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7836932,GSE245111+GSE245112,GSE245111,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0002524,mediastinal lymph node,Mediastinal lymph node,primary tissue,,,disease,luna,,House dust mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,51705,23405,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38374265,,GSM7836932,,,train,sda-all,samples/GSE245111/GSM7836932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836925,GSE245112,GSE245112,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002524,mediastinal lymph node,mediastinal lymph node,primary tissue,,,perturbation,luna,,House Dust Mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,657,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.446494575753199,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836925,,,train,sda-all,samples/GSE245112/GSM7836925,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836926,GSE245112,GSE245112,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002524,mediastinal lymph node,mediastinal lymph node,primary tissue,,,perturbation,luna,,House Dust Mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,582,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.450924709168884,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836926,,,train,sda-all,samples/GSE245112/GSM7836926,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836927,GSE245112,GSE245112,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002524,mediastinal lymph node,mediastinal lymph node,primary tissue,,,perturbation,luna,,House Dust Mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,621,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.4460830472134925,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836927,,,train,sda-all,samples/GSE245112/GSM7836927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836928,GSE245112,GSE245112,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002524,mediastinal lymph node,mediastinal lymph node,primary tissue,,,perturbation,luna,,House Dust Mite intranasal,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,885,32285,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.451862933083515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836928,,,train,sda-all,samples/GSE245112/GSM7836928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7839621,GSE245263,GSE245263,Spatial transcriptomics of brains from tumor-bearing C57BL/6 mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Control 28d,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2158,32272,counts,pixel,0.3460124757047214,platform_constant,True,H&E,0.5000049285355638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1101/2023.10.26.564166v1,GSM7839621,,,train,hesrt,samples/GSE245263/GSM7839621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.34, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM7840102,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3067,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840102,,,val,hesrt,samples/GSE245274/GSM7840102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840103,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3268,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840103,,,val,hesrt,samples/GSE245274/GSM7840103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840104,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3724,32285,counts,pixel,5.492008841412778,platform_constant,True,H&E,5.492008841412778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840104,,,val,hesrt,samples/GSE245274/GSM7840104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840105,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4039,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840105,,,val,hesrt,samples/GSE245274/GSM7840105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840106,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3779,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840106,,,val,hesrt,samples/GSE245274/GSM7840106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840107,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3795,32285,counts,pixel,5.4920417193261155,platform_constant,True,H&E,5.4920417193261155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840107,,,val,hesrt,samples/GSE245274/GSM7840107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840108,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3049,32285,counts,pixel,5.4920417193261155,platform_constant,True,H&E,5.4920417193261155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840108,,,val,hesrt,samples/GSE245274/GSM7840108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840109,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3616,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840109,,,val,hesrt,samples/GSE245274/GSM7840109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840110,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4639,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840110,,,val,hesrt,samples/GSE245274/GSM7840110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840111,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2761,32285,counts,pixel,5.492041719326132,platform_constant,True,H&E,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840111,,,val,hesrt,samples/GSE245274/GSM7840111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840112,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2578,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840112,,,val,hesrt,samples/GSE245274/GSM7840112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840113,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2964,32285,counts,pixel,5.475513139933125,platform_constant,True,H&E,5.475513139933125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840113,,,val,hesrt,samples/GSE245274/GSM7840113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840114,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4427,32285,counts,pixel,5.475513139933188,platform_constant,True,H&E,5.475513139933188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840114,,,val,hesrt,samples/GSE245274/GSM7840114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840115,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4414,32285,counts,pixel,5.492008841412744,platform_constant,True,H&E,5.492008841412744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840115,,,val,hesrt,samples/GSE245274/GSM7840115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840116,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2567,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840116,,,val,hesrt,samples/GSE245274/GSM7840116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840117,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2816,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840117,,,val,hesrt,samples/GSE245274/GSM7840117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840118,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3354,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840118,,,val,hesrt,samples/GSE245274/GSM7840118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840119,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2930,32285,counts,pixel,5.492041719326132,platform_constant,True,H&E,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840119,,,val,hesrt,samples/GSE245274/GSM7840119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840120,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3153,32285,counts,pixel,5.4920417193261155,platform_constant,True,H&E,5.4920417193261155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840120,,,val,hesrt,samples/GSE245274/GSM7840120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840121,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2568,32285,counts,pixel,5.492008841412778,platform_constant,True,H&E,5.492008841412778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840121,,,val,hesrt,samples/GSE245274/GSM7840121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840122,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2691,32285,counts,pixel,5.492008841412744,platform_constant,True,H&E,5.492008841412744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840122,,,val,hesrt,samples/GSE245274/GSM7840122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840123,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2434,32285,counts,pixel,5.492041719326132,platform_constant,True,H&E,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840123,,,val,hesrt,samples/GSE245274/GSM7840123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840124,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1765,32285,counts,pixel,5.492041719326132,platform_constant,True,H&E,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840124,,,val,hesrt,samples/GSE245274/GSM7840124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840125,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2625,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840125,,,val,hesrt,samples/GSE245274/GSM7840125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840126,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2882,32285,counts,pixel,5.475513139933142,platform_constant,True,H&E,5.475513139933142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840126,,,val,hesrt,samples/GSE245274/GSM7840126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7840127,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2181,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840127,,,val,hesrt,samples/GSE245274/GSM7840127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840128,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4389,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840128,,,val,hesrt,samples/GSE245274/GSM7840128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840129,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3719,32285,counts,pixel,5.473103644431904,platform_constant,True,H&E,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840129,,,val,hesrt,samples/GSE245274/GSM7840129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840130,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3323,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840130,,,val,hesrt,samples/GSE245274/GSM7840130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840131,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3622,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840131,,,val,hesrt,samples/GSE245274/GSM7840131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840132,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3528,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840132,,,val,hesrt,samples/GSE245274/GSM7840132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840133,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3696,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840133,,,val,hesrt,samples/GSE245274/GSM7840133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840134,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2817,32285,counts,pixel,5.511111308629315,platform_constant,True,H&E,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840134,,,val,hesrt,samples/GSE245274/GSM7840134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7840135,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,perturbation,luna,,FMT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2511,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840135,,,val,hesrt,samples/GSE245274/GSM7840135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840136,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4141,32285,counts,pixel,5.511111308629315,platform_constant,True,H&E,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840136,,,val,hesrt,samples/GSE245274/GSM7840136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840137,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3431,32285,counts,pixel,5.473103644431938,platform_constant,True,H&E,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840137,,,val,hesrt,samples/GSE245274/GSM7840137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840138,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3378,32285,counts,pixel,5.473103644431904,platform_constant,True,H&E,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840138,,,val,hesrt,samples/GSE245274/GSM7840138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840139,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4096,32285,counts,pixel,5.473103644431904,platform_constant,True,H&E,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840139,,,val,hesrt,samples/GSE245274/GSM7840139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840140,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3868,32285,counts,pixel,5.511111308629315,platform_constant,True,H&E,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840140,,,val,hesrt,samples/GSE245274/GSM7840140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840141,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3450,32285,counts,pixel,5.511111308629315,platform_constant,True,H&E,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840141,,,val,hesrt,samples/GSE245274/GSM7840141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840142,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2250,32285,counts,pixel,5.473103644431904,platform_constant,True,H&E,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840142,,,val,hesrt,samples/GSE245274/GSM7840142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840143,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2921,32285,counts,pixel,5.5109784259136525,platform_constant,True,H&E,5.5109784259136525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840143,,,val,hesrt,samples/GSE245274/GSM7840143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7840144,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3442,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840144,,,val,hesrt,samples/GSE245274/GSM7840144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840145,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3575,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840145,,,val,hesrt,samples/GSE245274/GSM7840145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7840146,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2924,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840146,,,val,hesrt,samples/GSE245274/GSM7840146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7840147,GSE245274+GSE245316,GSE245274,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,disease,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3514,32285,counts,pixel,5.492041719326099,platform_constant,True,H&E,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840147,,,val,hesrt,samples/GSE245274/GSM7840147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7840724,GSE245313+GSE245320,GSE245313,Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics],Xenopus laevis,8355,African clawed frog,Xenopus laevis,8355,,False,False,GEO organism field,Xenopus laevis,,other,luna,UBERON:0002415,tail,tail,primary tissue,,,perturbation,luna,,amputated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1805,44478,counts,pixel,4.527779653363857,platform_constant,True,H&E,4.527779653363857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39350302,,GSM7840724,,,train,hesrt,samples/GSE245313/GSM7840724,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840725,GSE245313+GSE245320,GSE245313,Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics],Xenopus laevis,8355,African clawed frog,Xenopus laevis,8355,,False,False,GEO organism field,Xenopus laevis,,other,luna,UBERON:0002415,tail,tail,primary tissue,,,perturbation,luna,,amputated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1267,44478,counts,pixel,4.527898528605814,platform_constant,True,H&E,4.527898528605814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39350302,,GSM7840725,,,train,hesrt,samples/GSE245313/GSM7840725,sda-tissue-disease-2.4,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7840726,GSE245313+GSE245320,GSE245313,Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics],Xenopus laevis,8355,African clawed frog,Xenopus laevis,8355,,False,False,GEO organism field,Xenopus laevis,,other,luna,UBERON:0002415,tail,tail,primary tissue,,,perturbation,luna,,amputated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2123,44478,counts,pixel,4.531211792132464,platform_constant,True,H&E,4.531211792132464,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39350302,,GSM7840726,,,train,hesrt,samples/GSE245313/GSM7840726,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7841727,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,64,36601,counts,pixel,4.246753212779202,platform_constant,True,H&E,4.246753212779202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841727,,,train,hesrt,samples/GSE245388/GSM7841727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841728,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,130,36601,counts,pixel,4.250649277113107,platform_constant,True,H&E,4.250649277113107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841728,,,train,hesrt,samples/GSE245388/GSM7841728,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7841729,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,235,36601,counts,pixel,4.248052033437787,platform_constant,True,H&E,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841729,,,train,hesrt,samples/GSE245388/GSM7841729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841730,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,149,36601,counts,pixel,4.246753212779202,platform_constant,True,H&E,4.246753212779202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841730,,,train,hesrt,samples/GSE245388/GSM7841730,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841731,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,444,36601,counts,pixel,4.248052033437787,platform_constant,True,H&E,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841731,,,train,hesrt,samples/GSE245388/GSM7841731,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7841732,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,99,36601,counts,pixel,4.248052033437787,platform_constant,True,H&E,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841732,,,train,hesrt,samples/GSE245388/GSM7841732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841733,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,498,36601,counts,pixel,4.248052033437787,platform_constant,True,H&E,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841733,,,train,hesrt,samples/GSE245388/GSM7841733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841734,GSE245388+GSE245389,GSE245388,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,302,36601,counts,pixel,4.250649277113107,platform_constant,True,H&E,4.250649277113107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841734,,,train,hesrt,samples/GSE245388/GSM7841734,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7843143,GSE205449+GSE245469,GSE245469,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0000033,head,Whole head,primary tissue,,,normal,luna,,Wild-type,embryonic,luna,embryonic,14.5 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1106,19465,counts,pixel,5.600000180991986,platform_constant,True,H&E,5.600000180991986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843143,,,train,hesrt,samples/GSE245469/GSM7843143,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7843144,GSE205449+GSE245469,GSE245469,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0000033,head,Whole head,primary tissue,,,normal,luna,,Wild-type,embryonic,luna,embryonic,14.5 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2310,19465,counts,pixel,4.208333375416684,platform_constant,True,H&E,4.208333375416684,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843144,,,train,hesrt,samples/GSE245469/GSM7843144,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7843145,GSE205449+GSE245469,GSE245469,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0000033,head,Whole head,primary tissue,,,normal,luna,,Wild-type,embryonic,luna,embryonic,15.5 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,989,19465,counts,pixel,5.600000180991986,platform_constant,True,H&E,5.600000180991986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843145,,,train,hesrt,samples/GSE245469/GSM7843145,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7843146,GSE205449+GSE245469,GSE245469,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0000033,head,Whole head,primary tissue,,,normal,luna,,Wild-type,embryonic,luna,embryonic,15.5 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1952,19465,counts,pixel,4.095348627527462,platform_constant,True,H&E,4.095348627527462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843146,,,train,hesrt,samples/GSE245469/GSM7843146,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7845285,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,TC vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,991,68886,counts,pixel,4.03355418778956,platform_constant,True,H&E,4.03355418778956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845285,,,test,hesrt,samples/GSE245582/GSM7845285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845286,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,TC vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1237,68886,counts,pixel,4.0971302690472395,platform_constant,True,H&E,4.0971302690472395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845286,,,test,hesrt,samples/GSE245582/GSM7845286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845287,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T0 untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2692,68886,counts,pixel,4.04061788949363,platform_constant,True,H&E,4.04061788949363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845287,,,test,hesrt,samples/GSE245582/GSM7845287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845288,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T0 untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2493,68886,counts,pixel,4.061810310498913,platform_constant,True,H&E,4.061810310498913,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845288,,,test,hesrt,samples/GSE245582/GSM7845288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845289,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T1 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,288,68886,counts,pixel,4.03355418778956,platform_constant,True,H&E,4.03355418778956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845289,,,test,hesrt,samples/GSE245582/GSM7845289,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845290,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T1 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,314,68886,counts,pixel,4.019425893704678,platform_constant,True,H&E,4.019425893704678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845290,,,test,hesrt,samples/GSE245582/GSM7845290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845291,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T2 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,790,68886,counts,pixel,4.005298045800094,platform_constant,True,H&E,4.005298045800094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845291,,,test,hesrt,samples/GSE245582/GSM7845291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845292,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T2 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,814,68886,counts,pixel,4.047681957038974,platform_constant,True,H&E,4.047681957038974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845292,,,test,hesrt,samples/GSE245582/GSM7845292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845293,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T3 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1134,68886,counts,pixel,4.04061788949363,platform_constant,True,H&E,4.04061788949363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845293,,,test,hesrt,samples/GSE245582/GSM7845293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.91}",,
GSM7845294,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T3 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,998,68886,counts,pixel,4.026490169303306,platform_constant,True,H&E,4.026490169303306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845294,,,test,hesrt,samples/GSE245582/GSM7845294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM7845295,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T4 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1625,68886,counts,pixel,4.026490169303315,platform_constant,True,H&E,4.026490169303315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845295,,,test,hesrt,samples/GSE245582/GSM7845295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM7845296,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4237-1 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T4 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1986,68886,counts,pixel,4.047681957038974,platform_constant,True,H&E,4.047681957038974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845296,,,test,hesrt,samples/GSE245582/GSM7845296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845297,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,TC vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1580,68886,counts,pixel,4.032891797361193,platform_constant,True,H&E,4.032891797361193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845297,,,test,hesrt,samples/GSE245582/GSM7845297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845298,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,TC vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1843,68886,counts,pixel,4.022074984962202,platform_constant,True,H&E,4.022074984962202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845298,,,test,hesrt,samples/GSE245582/GSM7845298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845299,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T0 untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1661,68886,counts,pixel,4.050110425574239,platform_constant,True,H&E,4.050110425574239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845299,,,test,hesrt,samples/GSE245582/GSM7845299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845300,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T0 untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1293,68886,counts,pixel,4.04922732638084,platform_constant,True,H&E,4.04922732638084,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845300,,,test,hesrt,samples/GSE245582/GSM7845300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM7845301,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T1 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1044,68886,counts,pixel,4.0331123980648975,platform_constant,True,H&E,4.0331123980648975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845301,,,test,hesrt,samples/GSE245582/GSM7845301,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845302,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T1 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1103,68886,counts,pixel,4.032891797361193,platform_constant,True,H&E,4.032891797361193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845302,,,test,hesrt,samples/GSE245582/GSM7845302,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845303,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T2 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1175,68886,counts,pixel,4.028145744980908,platform_constant,True,H&E,4.028145744980908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845303,,,test,hesrt,samples/GSE245582/GSM7845303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845304,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T2 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1134,68886,counts,pixel,4.0945917112683246,platform_constant,True,H&E,4.0945917112683246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845304,,,test,hesrt,samples/GSE245582/GSM7845304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845305,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T3 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1935,68886,counts,pixel,4.046026527358457,platform_constant,True,H&E,4.046026527358457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845305,,,test,hesrt,samples/GSE245582/GSM7845305,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845306,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T3 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1808,68886,counts,pixel,4.046909343671223,platform_constant,True,H&E,4.046909343671223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845306,,,test,hesrt,samples/GSE245582/GSM7845306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845307,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T4 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1574,68886,counts,pixel,4.0820089143155585,platform_constant,True,H&E,4.0820089143155585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845307,,,test,hesrt,samples/GSE245582/GSM7845307,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM7845308,GSE245582,GSE245582,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,WM4007 melanoma PDX,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,T4 dabrafenib/trametinib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1960,68886,counts,pixel,4.094260450555226,platform_constant,True,H&E,4.094260450555226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845308,,,test,hesrt,samples/GSE245582/GSM7845308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.9500000000000001}",,
GSM7845914,GSE245620,GSE245620,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,MONDO:0013433;MONDO:0005154,primary sclerosing cholangitis;liver disorder,disease,luna,Primary sclerosing cholangitis (PSC),,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3118,36601,counts,pixel,0.303951367781155,platform_constant,True,H&E,0.5000052358599784,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845914,,,train,hesrt,samples/GSE245620/GSM7845914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM7845915,GSE245620,GSE245620,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,MONDO:0013433;MONDO:0005154,primary sclerosing cholangitis;liver disorder,disease,luna,Primary sclerosing cholangitis (PSC),,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2670,36601,counts,pixel,0.30303030303030304,platform_constant,True,H&E,0.500000955148153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845915,,,train,hesrt,samples/GSE245620/GSM7845915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM7845916,GSE245620,GSE245620,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,MONDO:0013433;MONDO:0005154,primary sclerosing cholangitis;liver disorder,disease,luna,Primary sclerosing cholangitis (PSC),,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3322,36601,counts,pixel,0.303951367781155,platform_constant,True,H&E,0.5000054253234683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845916,,,train,hesrt,samples/GSE245620/GSM7845916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.76}",,
GSM7845917,GSE245620,GSE245620,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Adult Liver,primary tissue,MONDO:0013433;MONDO:0005154,primary sclerosing cholangitis;liver disorder,disease,luna,Primary sclerosing cholangitis (PSC),,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3174,36601,counts,pixel,0.303951367781155,platform_constant,True,H&E,0.49998875101574514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845917,,,train,hesrt,samples/GSE245620/GSM7845917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.9500000000000001}",,
GSM7847146,GSE245704,GSE245704,Spatial transcriptomic analysis of Gastric adenocarcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric adenocarcinoma,tumour tissue,MONDO:0005036,gastric adenocarcinoma,disease,luna,Gastric adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,GSE245704:GA48269,GA48269,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2560,18085,counts,pixel,14.449842842140209,platform_constant,True,H&E,14.449842842140209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39021298,,GSM7847146,,,train,hesrt,samples/GSE245704/GSM7847146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7850822,GSE245908+GSE245909,GSE245908,Identification of TREM1+CD163+ myeloid cells as a deleterious immune subset in HCC [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Hepatocellular Carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2261,36601,counts,pixel,5.66727241874641,platform_constant,True,H&E,5.66727241874641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38350444;41270217,,GSM7850822,,,train,hesrt,samples/GSE245908/GSM7850822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7850823,GSE245908+GSE245909,GSE245908,Identification of TREM1+CD163+ myeloid cells as a deleterious immune subset in HCC [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Hepatocellular Carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1987,36601,counts,pixel,5.8763632677981406,platform_constant,True,H&E,5.8763632677981406,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38350444;41270217,,GSM7850823,,,train,hesrt,samples/GSE245908/GSM7850823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7869821,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1334,17943,counts,pixel,3.9634616084166336,platform_constant,True,H&E,3.9634616084166336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869821,,,train,hesrt,samples/GSE246495/GSM7869821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7869822,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1342,17943,counts,pixel,3.9615384060769183,platform_constant,True,H&E,3.9615384060769183,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869822,,,train,hesrt,samples/GSE246495/GSM7869822,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7869823,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1268,17943,counts,pixel,3.9615384060769183,platform_constant,True,H&E,3.9615384060769183,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869823,,,train,hesrt,samples/GSE246495/GSM7869823,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7869824,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2169,17943,counts,pixel,3.9615384060769183,platform_constant,True,H&E,3.9615384060769183,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869824,,,train,hesrt,samples/GSE246495/GSM7869824,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7869825,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2659,17943,counts,pixel,4.428906345000082,platform_constant,True,H&E,4.428906345000082,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869825,,,train,hesrt,samples/GSE246495/GSM7869825,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7869826,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3029,17943,counts,pixel,4.515734082207103,platform_constant,True,H&E,4.515734082207103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869826,,,train,hesrt,samples/GSE246495/GSM7869826,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7869827,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2971,17943,counts,pixel,4.499206445714333,platform_constant,True,H&E,4.499206445714333,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869827,,,train,hesrt,samples/GSE246495/GSM7869827,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7869828,GSE246495,GSE246495,Spatial transcriptomics in human mid luteal endometrial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0000995,uterus,Endometrial biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2761,17943,counts,pixel,4.515734082207063,platform_constant,True,H&E,4.515734082207063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869828,,,train,hesrt,samples/GSE246495/GSM7869828,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7870036,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,disease,luna,,BRCA2,not stated,luna,not stated,,female,extracted field,female,GSE246518:0259,0259,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3340,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870036,,,train,sda-all,samples/GSE246518/GSM7870036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870037,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,disease,luna,,BRCA2,not stated,luna,not stated,,female,extracted field,female,GSE246518:0259,0259,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3601,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870037,,,train,sda-all,samples/GSE246518/GSM7870037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870038,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,BRCA2,not stated,luna,not stated,,female,extracted field,female,GSE246518:0011,0011,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1828,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870038,,,train,sda-all,samples/GSE246518/GSM7870038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.08, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870039,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,disease,luna,,BRCA2,not stated,luna,not stated,,female,extracted field,female,GSE246518:patient_1218,patient_1218,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1306,36601,counts,pixel,13.282759668653625,platform_constant,True,H&E,13.282759668653625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870039,,,train,hesrt,samples/GSE246518/GSM7870039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870040,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,BRCA2,not stated,luna,not stated,,female,extracted field,female,GSE246518:210727,210727,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3736,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870040,,,train,sda-all,samples/GSE246518/GSM7870040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.16, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7870041,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,disease,luna,,BRCA2,not stated,luna,not stated,,female,extracted field,female,GSE246518:patient_0006,patient_0006,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3617,36601,counts,pixel,15.174017668690784,platform_constant,True,H&E,15.174017668690784,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870041,,,train,hesrt,samples/GSE246518/GSM7870041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.24, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870042,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,Normal,not stated,luna,not stated,,female,extracted field,female,GSE246518:0059,0059,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3305,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870042,,,train,sda-all,samples/GSE246518/GSM7870042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7870043,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,Normal,not stated,luna,not stated,,female,extracted field,female,GSE246518:0131,0131,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3751,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870043,,,train,sda-all,samples/GSE246518/GSM7870043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7870044,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,Normal,not stated,luna,not stated,,female,extracted field,female,GSE246518:patient_0409,patient_0409,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2246,36601,counts,pixel,15.527950310559012,platform_constant,True,H&E,15.527950310559012,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870044,,,train,hesrt,samples/GSE246518/GSM7870044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7870045,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,Normal,not stated,luna,not stated,,female,extracted field,female,GSE246518:patient_0179,patient_0179,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2639,36601,counts,pixel,15.527950310559012,platform_constant,True,H&E,15.527950310559012,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870045,,,train,hesrt,samples/GSE246518/GSM7870045,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7870046,GSE246518,GSE246518,Spatial transcriptomics sequencing profiles of human breast tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,Normal,not stated,luna,not stated,,female,extracted field,female,GSE246518:0179,0179,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,645,36601,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870046,,,train,sda-all,samples/GSE246518/GSM7870046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7871985,GSE246584,GSE246584,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,tumour tissue,MONDO:0021042;MONDO:1011336,"glioma;nervous system disorder, non-human animal",disease,luna,,NestinTVA; p53FL/FL; H3f3aloxP-Stop-loxP-K27M-Tag/+;AtmFL/+,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,268046,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999925222033039,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871985,,,train,sda-all,samples/GSE246584/GSM7871985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7871986,GSE246584,GSE246584,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,tumour tissue,MONDO:0021042;MONDO:1011336,"glioma;nervous system disorder, non-human animal",disease,luna,,10 Gy x 3 focal brain irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,275571,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000027250926531,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871986,,,train,sda-all,samples/GSE246584/GSM7871986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7871987,GSE246584,GSE246584,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,tumour tissue,MONDO:0021042;MONDO:1011336,"glioma;nervous system disorder, non-human animal",disease,luna,,NestinTVA; p53FL/FL; H3f3aloxP-Stop-loxP-K27M-Tag/+;AtmFL/FL,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,201816,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999925222033039,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871987,,,train,sda-all,samples/GSE246584/GSM7871987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7871988,GSE246584,GSE246584,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,tumour tissue,MONDO:0021042;MONDO:1011336,"glioma;nervous system disorder, non-human animal",disease,luna,,10 Gy x 3 focal brain irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,44941,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999173143707626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871988,,,train,sda-all,samples/GSE246584/GSM7871988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7876407,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,xenograft,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1048,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876407,,,train,sda-all,samples/GSE246770/GSM7876407,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM7876408,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,xenograft,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1044,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876408,,,train,sda-all,samples/GSE246770/GSM7876408,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7876409,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,xenograft,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1702,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876409,,,train,sda-all,samples/GSE246770/GSM7876409,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.71, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM7876410,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,xenograft,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1678,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876410,,,train,sda-all,samples/GSE246770/GSM7876410,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM7876411,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,xenograft,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3135,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876411,,,train,sda-all,samples/GSE246770/GSM7876411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM7876412,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,xenograft,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2913,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876412,,,train,sda-all,samples/GSE246770/GSM7876412,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM7876413,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0000029,lymph node,periaortic lymph node met,metastasis,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2184,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876413,,,train,sda-all,samples/GSE246770/GSM7876413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM7876414,GSE246762+GSE246770,GSE246770,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0000029,lymph node,periaortic lymph node met,metastasis,MONDO:0005070,neoplasm,disease,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2158,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,39394434,,GSM7876414,,,train,sda-all,samples/GSE246770/GSM7876414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM7890128,GSE247450,GSE247450,MERFISH reveals embryonic endothelial heterogeneity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,whole embryo,whole embryo/organism,,,normal,luna,,wild type,embryonic,age rule: embryonic day,embryonic,E9.5,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1077,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38348657,,GSM7890128,,,train,sda-all,samples/GSE247450/GSM7890128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7890129,GSE247450,GSE247450,MERFISH reveals embryonic endothelial heterogeneity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,whole embryo,whole embryo/organism,,,normal,luna,,wild type,embryonic,age rule: embryonic day,embryonic,E9.5,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,6835,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38348657,,GSM7890129,,,train,sda-all,samples/GSE247450/GSM7890129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7890130,GSE247450,GSE247450,MERFISH reveals embryonic endothelial heterogeneity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,whole embryo,whole embryo/organism,,,normal,luna,,wild type,embryonic,age rule: embryonic day,embryonic,E15.5,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,219525,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,38348657,,GSM7890130,,,train,sda-all,samples/GSE247450/GSM7890130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308910,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,3364,31253,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308910,,,train,sda-all,samples/GSE247834/GSM8308910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308911,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,3600,31253,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308911,,,train,sda-all,samples/GSE247834/GSM8308911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308912,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,3364,31253,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308912,,,train,sda-all,samples/GSE247834/GSM8308912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8308913,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,3364,31253,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308913,,,train,sda-all,samples/GSE247834/GSM8308913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308914,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,1399,31253,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8308914,,,train,sda-all,samples/GSE247834/GSM8308914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308915,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,3390,31253,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308915,,,train,sda-all,samples/GSE247834/GSM8308915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308916,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,2681,31253,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8308916,,,train,sda-all,samples/GSE247834/GSM8308916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8308917,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,2633,31253,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8308917,,,train,sda-all,samples/GSE247834/GSM8308917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308918,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,1910,31253,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8308918,,,train,sda-all,samples/GSE247834/GSM8308918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308919,GSE247834,GSE247834,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E13.5,female,extracted field,Female,,,,,Other,release v3,Well-ST-seq,sequencing-based,other,,,spot,2497,31253,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8308919,,,train,sda-all,samples/GSE247834/GSM8308919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7905572,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Chow diet,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2282,32338,counts,pixel,4.244932219591538,platform_constant,True,H&E,4.244932219591538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905572,,,train,hesrt,samples/GSE248077/GSM7905572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7905573,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Chow diet,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1841,32338,counts,pixel,4.244570183798959,platform_constant,True,H&E,4.244570183798959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905573,,,train,hesrt,samples/GSE248077/GSM7905573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905574,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Chow diet,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1719,32338,counts,pixel,4.246259564987877,platform_constant,True,H&E,4.246259564987877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905574,,,train,hesrt,samples/GSE248077/GSM7905574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905575,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Chow diet,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2254,32338,counts,pixel,4.244232639482823,platform_constant,True,H&E,4.244232639482823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905575,,,train,hesrt,samples/GSE248077/GSM7905575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905576,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Chow diet,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2527,32338,counts,pixel,4.245439307106261,platform_constant,True,H&E,4.245439307106261,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905576,,,train,hesrt,samples/GSE248077/GSM7905576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905577,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Chow diet,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2165,32338,counts,pixel,4.245270460076306,platform_constant,True,H&E,4.245270460076306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905577,,,train,hesrt,samples/GSE248077/GSM7905577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905578,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1674,32338,counts,pixel,4.245439307106261,platform_constant,True,H&E,4.245439307106261,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905578,,,train,hesrt,samples/GSE248077/GSM7905578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905579,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1396,32338,counts,pixel,4.2457770414626665,platform_constant,True,H&E,4.2457770414626665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905579,,,train,hesrt,samples/GSE248077/GSM7905579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7905580,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3184,32338,counts,pixel,4.245246233712873,platform_constant,True,H&E,4.245246233712873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905580,,,train,hesrt,samples/GSE248077/GSM7905580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905581,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1699,32338,counts,pixel,4.245583672505967,platform_constant,True,H&E,4.245583672505967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905581,,,train,hesrt,samples/GSE248077/GSM7905581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905582,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2134,32338,counts,pixel,4.246090598376428,platform_constant,True,H&E,4.246090598376428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905582,,,train,hesrt,samples/GSE248077/GSM7905582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905583,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2993,32338,counts,pixel,4.245270460076306,platform_constant,True,H&E,4.245270460076306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905583,,,train,hesrt,samples/GSE248077/GSM7905583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905584,GSE248077,GSE248077,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,CDAA-HFD diet (NASH model),not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1932,32338,counts,pixel,4.245607900795063,platform_constant,True,H&E,4.245607900795063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905584,,,train,hesrt,samples/GSE248077/GSM7905584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7905760,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2611,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.087568027069517,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905760,,,train,sda-all,samples/GSE248082/GSM7905760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7905761,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4721,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.170410231199979,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905761,,,train,sda-all,samples/GSE248082/GSM7905761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905762,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4650,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.9557455975757967,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905762,,,train,sda-all,samples/GSE248082/GSM7905762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905763,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4430,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8650276233115766,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905763,,,train,sda-all,samples/GSE248082/GSM7905763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905765,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4235,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.9458412052593417,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905765,,,train,sda-all,samples/GSE248082/GSM7905765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905767,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4458,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.177569980258376,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905767,,,train,sda-all,samples/GSE248082/GSM7905767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905768,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0002771,idiopathic pulmonary fibrosis;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4653,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.6135596176196225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905768,,,train,sda-all,samples/GSE248082/GSM7905768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8087031,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Normal human lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4332,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.906857169053641,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087031,,,train,sda-all,samples/GSE248082/GSM8087031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087032,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Normal human lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2944,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.592366117860611,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087032,,,train,sda-all,samples/GSE248082/GSM8087032,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087033,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Normal human lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3393,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.7606806119995615,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087033,,,train,sda-all,samples/GSE248082/GSM8087033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087034,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Normal human lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1798,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.089491304762761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087034,,,train,sda-all,samples/GSE248082/GSM8087034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087035,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Normal human lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4547,36601,counts,um,1.0,verified,True,H&E,4.071984693334073,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087035,,,train,sda-all,samples/GSE248082/GSM8087035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8087038,GSE248082,GSE248082,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Idiopathic pulmonary fibrosis,primary tissue,MONDO:0800504;MONDO:0800497;MONDO:0002771,idiopathic pulmonary fibrosis;interstitial lung disease 2;pulmonary fibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2753,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.118531418106387,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087038,,,train,sda-all,samples/GSE248082/GSM8087038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908359,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,,,normal,luna,control,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1302,36601,counts,pixel,3.8981819055010924,platform_constant,True,H&E,3.8981819055010924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908359,,,test,hesrt,samples/GSE248205/GSM7908359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908360,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,,,normal,luna,control,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2290,36601,counts,pixel,3.970200272613379,platform_constant,True,H&E,3.970200272613379,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908360,,,test,hesrt,samples/GSE248205/GSM7908360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908361,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,MONDO:0007699,Hashimoto thyroiditis,disease,luna,Hashimoto's thyroiditis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2041,36601,counts,pixel,4.194545574006121,platform_constant,True,H&E,4.194545574006121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908361,,,test,hesrt,samples/GSE248205/GSM7908361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908362,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,MONDO:0007699,Hashimoto thyroiditis,disease,luna,Hashimoto's thyroiditis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2625,36601,counts,pixel,4.363636433454573,platform_constant,True,H&E,4.363636433454573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908362,,,test,hesrt,samples/GSE248205/GSM7908362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908363,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,MONDO:0007699,Hashimoto thyroiditis,disease,luna,Hashimoto's thyroiditis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2144,36601,counts,pixel,4.363636433454573,platform_constant,True,H&E,4.363636433454573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908363,,,test,hesrt,samples/GSE248205/GSM7908363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908364,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,MONDO:0005364,Graves disease,disease,luna,Graves' disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2279,36601,counts,pixel,4.363636433454573,platform_constant,True,H&E,4.363636433454573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908364,,,test,hesrt,samples/GSE248205/GSM7908364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908365,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,MONDO:0005364,Graves disease,disease,luna,Graves' disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2171,36601,counts,pixel,4.245544649555644,platform_constant,True,H&E,4.245544649555644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908365,,,test,hesrt,samples/GSE248205/GSM7908365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908366,GSE248205,GSE248205,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,MONDO:0005364,Graves disease,disease,luna,Graves' disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2133,36601,counts,pixel,3.8981819055010924,platform_constant,True,H&E,3.8981819055010924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908366,,,test,hesrt,samples/GSE248205/GSM7908366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908792,GSE248230,GSE248230,Generation of human neuromusculoskeletal tri-tissue organoids [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,510,36601,counts,pixel,4.011809216169323,platform_constant,True,H&E,4.011809216169323,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7908792,,,train,hesrt,samples/GSE248230/GSM7908792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7911864,GSE248347,GSE248347,Spatial transcriptomics to dissect molecular signature of cardiac fibroblasts in experimental autoimmune myocarditis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,d0,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1978,32285,counts,pixel,5.141131218215499,platform_constant,True,H&E,5.141131218215499,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41341993,,GSM7911864,,,train,hesrt,samples/GSE248347/GSM7911864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7911866,GSE248347,GSE248347,Spatial transcriptomics to dissect molecular signature of cardiac fibroblasts in experimental autoimmune myocarditis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0022519,autoimmune myocarditis,disease,mondo_predicate,,d19,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1811,32285,counts,pixel,4.475135310247175,platform_constant,True,H&E,4.475135310247175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41341993,,GSM7911866,,,train,hesrt,samples/GSE248347/GSM7911866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.15}",disease_status;life_stage,low_confidence_annotation
GSM7911966,GSE248356,GSE248356,Spatial transcriptomics reveals the pharmacological effects on tumors and TME structural heterogeneity under MASK vaccine treatment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,PBS,juvenile,age rule: age with unit,not stated,4 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4798,32589,counts,pixel,5.669230425602122,platform_constant,True,H&E,5.669230425602122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40303352,,GSM7911966,,,train,hesrt,samples/GSE248356/GSM7911966,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7911967,GSE248356,GSE248356,Spatial transcriptomics reveals the pharmacological effects on tumors and TME structural heterogeneity under MASK vaccine treatment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,"MASK vaccine, 7 days",juvenile,age rule: age with unit,not stated,4 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4898,32589,counts,pixel,5.036046611392796,platform_constant,True,H&E,5.036046611392796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40303352,,GSM7911967,,,train,hesrt,samples/GSE248356/GSM7911967,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7911968,GSE248356,GSE248356,Spatial transcriptomics reveals the pharmacological effects on tumors and TME structural heterogeneity under MASK vaccine treatment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,xenograft,MONDO:0005105,melanoma,disease,luna,melanoma,"MASK vaccine, 13 days",juvenile,age rule: age with unit,not stated,4 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4663,32589,counts,pixel,6.71452840267181,platform_constant,True,H&E,6.71452840267181,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40303352,,GSM7911968,,,train,hesrt,samples/GSE248356/GSM7911968,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7916286,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,normal,luna,,dim-reared control,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,575,32285,counts,pixel,4.547973562439277,platform_constant,True,H&E,4.547973562439277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916286,,,train,hesrt,samples/GSE248517/GSM7916286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916287,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,perturbation,luna,,1-day photo-oxidative damage,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,930,32285,counts,pixel,4.517288811231892,platform_constant,True,H&E,4.517288811231892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916287,,,train,hesrt,samples/GSE248517/GSM7916287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916288,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,perturbation,luna,,3-day photo-oxidative damage,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,968,32285,counts,pixel,4.351956975584891,platform_constant,True,H&E,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916288,,,train,hesrt,samples/GSE248517/GSM7916288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916289,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,perturbation,luna,,5-day photo-oxidative damage,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,733,32285,counts,pixel,4.351956975584891,platform_constant,True,H&E,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916289,,,train,hesrt,samples/GSE248517/GSM7916289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM7916290,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,normal,luna,,dim-reared control,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,975,32285,counts,pixel,4.520177712555967,platform_constant,True,H&E,4.520177712555967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916290,,,train,hesrt,samples/GSE248517/GSM7916290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7916291,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,perturbation,luna,,1-day photo-oxidative damage,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,575,32285,counts,pixel,4.52017771255599,platform_constant,True,H&E,4.52017771255599,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916291,,,train,hesrt,samples/GSE248517/GSM7916291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916292,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,perturbation,luna,,3-day photo-oxidative damage,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,566,32285,counts,pixel,4.351956975584891,platform_constant,True,H&E,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916292,,,train,hesrt,samples/GSE248517/GSM7916292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.46, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7916293,GSE248517,GSE248517,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eye,primary tissue,,,perturbation,luna,,5-day photo-oxidative damage,adult,age rule: age with unit,juvenile,6 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,573,32285,counts,pixel,4.351956975584891,platform_constant,True,H&E,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916293,,,train,hesrt,samples/GSE248517/GSM7916293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7916581,GSE248545,GSE248545,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,Dentate gyrus,primary tissue,,,normal,luna,,control,adult,age rule: age in years,adult,42 years,male,extracted field,male,GSE248545:GSM7916581,GSM7916581,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4431,36601,counts,pixel,4.129011939409985,platform_constant,True,H&E,4.129011939409985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916581,,,test,hesrt,samples/GSE248545/GSM7916581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7916582,GSE248545,GSE248545,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,Dentate gyrus,primary tissue,,,normal,luna,,control,adult,age rule: age in years,adult,43 years,male,extracted field,male,GSE248545:GSM7916582,GSM7916582,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2996,36601,counts,pixel,3.9824561797772193,platform_constant,True,H&E,3.9824561797772193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916582,,,test,hesrt,samples/GSE248545/GSM7916582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7916583,GSE248545,GSE248545,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,Dentate gyrus,primary tissue,,,normal,luna,,control,adult,age rule: age in years,adult,26 years,male,extracted field,male,GSE248545:GSM7916583,GSM7916583,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3667,36601,counts,pixel,4.087719196870186,platform_constant,True,H&E,4.087719196870186,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916583,,,test,hesrt,samples/GSE248545/GSM7916583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7916584,GSE248545,GSE248545,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,Dentate gyrus,primary tissue,,,normal,luna,,control,adult,age rule: age in years,adult,21 years,male,extracted field,male,GSE248545:GSM7916584,GSM7916584,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3129,36601,counts,pixel,3.9814843784175635,platform_constant,True,H&E,3.9814843784175635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916584,,,test,hesrt,samples/GSE248545/GSM7916584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7917894,GSE248608+GSE248610,GSE248608,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001537,anterior tibial artery,Anterior tibial artery,primary tissue,MONDO:0005015;MONDO:0002123,diabetes mellitus;calcinosis,disease,luna,diabetic macroangiopathy,calcified,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1786,37487,counts,pixel,4.476502823919202,platform_constant,True,H&E,4.476502823919202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917894,,,train,hesrt,samples/GSE248608/GSM7917894,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7917895,GSE248608+GSE248610,GSE248608,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001537,anterior tibial artery,Anterior tibial artery,primary tissue,MONDO:0005015;MONDO:0002123,diabetes mellitus;calcinosis,disease,luna,diabetic macroangiopathy,calcified,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1294,36601,counts,pixel,3.970959269348189,platform_constant,True,H&E,3.970959269348189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917895,,,train,hesrt,samples/GSE248608/GSM7917895,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7917896,GSE248608+GSE248610,GSE248608,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001537,anterior tibial artery,Anterior tibial artery,primary tissue,MONDO:0005015;MONDO:0002123,diabetes mellitus;calcinosis,disease,luna,diabetic macroangiopathy,calcified,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1644,36601,counts,pixel,4.07437178660968,platform_constant,True,H&E,4.07437178660968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917896,,,train,hesrt,samples/GSE248608/GSM7917896,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7917897,GSE248608+GSE248610,GSE248608,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001537,anterior tibial artery,Anterior tibial artery,primary tissue,,,disease,luna,diabetic macroangiopathy,non-calcified,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1381,37487,counts,pixel,4.126776088340984,platform_constant,True,H&E,4.126776088340984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917897,,,train,hesrt,samples/GSE248608/GSM7917897,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7917898,GSE248608+GSE248610,GSE248608,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001537,anterior tibial artery,Anterior tibial artery,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,diabetic macroangiopathy,non-calcified,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,709,36601,counts,pixel,3.9856057870141504,platform_constant,True,H&E,3.9856057870141504,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917898,,,train,hesrt,samples/GSE248608/GSM7917898,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7917899,GSE248608+GSE248610,GSE248608,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001537,anterior tibial artery,Anterior tibial artery,primary tissue,,,disease,luna,diabetic macroangiopathy,non-calcified,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1716,36601,counts,pixel,4.025879410854079,platform_constant,True,H&E,4.025879410854079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917899,,,train,hesrt,samples/GSE248608/GSM7917899,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7918345,GSE248646,GSE248646,Spatial Gene Expression in the Adult Rat Patellar Tendon,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,other,luna,UBERON:0003676,patellar ligament,Patellar tendon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2179,25399,counts,pixel,0.5847853223158802,platform_constant,True,H&E,0.5847853223158802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7918345,,,train,hesrt,samples/GSE248646/GSM7918345,sda-tissue-disease-2.4,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7918346,GSE248646,GSE248646,Spatial Gene Expression in the Adult Rat Patellar Tendon,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,other,luna,UBERON:0003676,patellar ligament,Patellar tendon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1624,25399,counts,pixel,0.5847853223158802,platform_constant,True,H&E,0.5847853223158802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7918346,,,train,hesrt,samples/GSE248646/GSM7918346,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7923470,GSE248953,GSE248953,Cellular Heterogeneity of Pluripotent Stem Cell Derived Cardiomyocyte Grafts is Mechanistically Linked to Treatable Arrhythmias,Homo sapiens,9606,human,Homo sapiens;Sus scrofa,9606;9823,,False,True,GEO organism field,"Homo sapiens
Sus scrofa",,heart,luna,UBERON:0000948,heart,heart,cell culture,MONDO:0007263,cardiac rhythm disease,disease,mondo_predicate (Luna: perturbation),,retinoic acid treatment,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2817,65446,counts,um,1.0,verified,True,H&E-like (heuristic),3.9151869621505315,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM7923470,,,train,sda-all,samples/GSE248953/GSM7923470,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM7923471,GSE248953,GSE248953,Cellular Heterogeneity of Pluripotent Stem Cell Derived Cardiomyocyte Grafts is Mechanistically Linked to Treatable Arrhythmias,Homo sapiens,9606,human,Homo sapiens;Sus scrofa,9606;9823,,False,True,GEO organism field,"Homo sapiens
Sus scrofa",,heart,luna,UBERON:0000948,heart,heart,cell culture,MONDO:0005267,heart disorder,disease,mondo_predicate,,standard treatment,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2742,65446,counts,um,1.0,verified,True,H&E-like (heuristic),3.8650725659718423,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM7923471,,,train,sda-all,samples/GSE248953/GSM7923471,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.39, ""uberon"": 0.64, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7926970,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_ADM_D2_Rep1,adult,age rule: age with unit,adult,28 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2764,19465,counts,pixel,4.131902457249005,platform_constant,True,H&E,4.131902457249005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926970,,,train,hesrt,samples/GSE249121/GSM7926970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926971,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_ADM_D2_Rep2,adult,age rule: age with unit,adult,20 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2386,19465,counts,pixel,4.11552959065595,platform_constant,True,H&E,4.11552959065595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926971,,,train,hesrt,samples/GSE249121/GSM7926971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926972,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_ADM_D4_Rep2,adult,age rule: age with unit,adult,24 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3102,19465,counts,pixel,4.025693156905992,platform_constant,True,H&E,4.025693156905992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926972,,,train,hesrt,samples/GSE249121/GSM7926972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926973,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_ADM_D4_Rep1,adult,age rule: age with unit,adult,18 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4124,19465,counts,pixel,4.131288474322492,platform_constant,True,H&E,4.131288474322492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926973,,,train,hesrt,samples/GSE249121/GSM7926973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926974,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_ADM_D7_Rep1,adult,age rule: age with unit,adult,18 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3079,19465,counts,pixel,4.120436844006502,platform_constant,True,H&E,4.120436844006502,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926974,,,train,hesrt,samples/GSE249121/GSM7926974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926975,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_ADM_D7_Rep2,adult,age rule: age with unit,adult,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3112,19465,counts,pixel,4.110074390456353,platform_constant,True,H&E,4.110074390456353,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926975,,,train,hesrt,samples/GSE249121/GSM7926975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7926976,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_Ctrl_D2_Rep1,adult,age rule: age with unit,adult,10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2979,19465,counts,pixel,4.08603943771149,platform_constant,True,H&E,4.08603943771149,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926976,,,train,hesrt,samples/GSE249121/GSM7926976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926977,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_Ctrl_D2_Rep2,adult,age rule: age with unit,adult,10 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2784,19465,counts,pixel,4.110544841703988,platform_constant,True,H&E,4.110544841703988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926977,,,train,hesrt,samples/GSE249121/GSM7926977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926978,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_Ctrl_D4_Rep1,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3757,19465,counts,pixel,4.1155295906559415,platform_constant,True,H&E,4.1155295906559415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926978,,,train,hesrt,samples/GSE249121/GSM7926978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7926979,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_AK_Ctrl_D7_Rep1,adult,age rule: age with unit,adult,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3533,19465,counts,pixel,4.1111473114016714,platform_constant,True,H&E,4.1111473114016714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926979,,,train,hesrt,samples/GSE249121/GSM7926979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7926980,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_Caer_ADM_D2_Rep1,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1849,19465,counts,pixel,4.1367300322727045,platform_constant,True,H&E,4.1367300322727045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926980,,,train,hesrt,samples/GSE249121/GSM7926980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926981,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_Caer_ADM_D2_Rep2,adult,age rule: age with unit,juvenile,6 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1030,19465,counts,pixel,4.201300739219314,platform_constant,True,H&E,4.201300739219314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926981,,,train,hesrt,samples/GSE249121/GSM7926981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926982,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_Caer_ADM_D4_Rep1,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1697,19465,counts,pixel,4.095485978854921,platform_constant,True,H&E,4.095485978854921,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926982,,,train,hesrt,samples/GSE249121/GSM7926982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926983,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_Caer_ADM_D4_Rep2,adult,age rule: age with unit,juvenile,6 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1563,19465,counts,pixel,4.084643294743274,platform_constant,True,H&E,4.084643294743274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926983,,,train,hesrt,samples/GSE249121/GSM7926983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926984,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_Caer_ADM_D7_Rep1,adult,age rule: age with unit,juvenile,7 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2105,19465,counts,pixel,4.130695485689417,platform_constant,True,H&E,4.130695485689417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926984,,,train,hesrt,samples/GSE249121/GSM7926984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926985,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,perturbation,luna,,Panc_Caer_ADM_D7_Rep2,adult,age rule: age with unit,juvenile,7 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2139,19465,counts,pixel,4.087246610185445,platform_constant,True,H&E,4.087246610185445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926985,,,train,hesrt,samples/GSE249121/GSM7926985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926986,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,,Panc_Saline_Ctrl_D2_Rep1,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1400,19465,counts,pixel,4.1870511383740965,platform_constant,True,H&E,4.1870511383740965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926986,,,train,hesrt,samples/GSE249121/GSM7926986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926987,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,,Panc_Saline_Ctrl_D2_Rep2,adult,age rule: age with unit,juvenile,6 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,788,19465,counts,pixel,4.206923488631324,platform_constant,True,H&E,4.206923488631324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926987,,,train,hesrt,samples/GSE249121/GSM7926987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926988,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,,Panc_Saline_Ctrl_D4_Rep1,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1455,19465,counts,pixel,4.111749817395417,platform_constant,True,H&E,4.111749817395417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926988,,,train,hesrt,samples/GSE249121/GSM7926988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926989,GSE249121+GSE249143,GSE249121,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,,Panc_Saline_Ctrl_D7_Rep1,adult,age rule: age with unit,juvenile,7 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2053,19465,counts,pixel,4.080607972216002,platform_constant,True,H&E,4.080607972216002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926989,,,train,hesrt,samples/GSE249121/GSM7926989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7932817,GSE249279,GSE249279,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,Scleroderma skin,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,846,33538,counts,um,1.0,verified,True,H&E,5.026784190167373,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932817,,,train,sda-all,samples/GSE249279/GSM7932817,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7932818,GSE249279,GSE249279,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,Scleroderma skin,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,907,33538,counts,um,1.0,verified,True,H&E,5.029370789652315,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932818,,,train,sda-all,samples/GSE249279/GSM7932818,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.34, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7932819,GSE249279,GSE249279,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,Scleroderma skin,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,841,33538,counts,um,1.0,verified,True,H&E,4.997927494858994,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932819,,,train,sda-all,samples/GSE249279/GSM7932819,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7932820,GSE249279,GSE249279,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,Scleroderma skin,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,951,33538,counts,um,1.0,verified,True,H&E,5.037297735402497,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932820,,,train,sda-all,samples/GSE249279/GSM7932820,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7946801,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,neonatal or infant,age rule: postnatal day,neonatal or infant,P7,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2664,55357,counts,um,1.0,verified,True,H&E,4.2986043374578236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946801,,,val,sda-all,samples/GSE249403/GSM7946801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946802,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,neonatal or infant,age rule: postnatal day,neonatal or infant,P7,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2692,55357,counts,um,1.0,verified,True,H&E,4.296879287066082,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946802,,,val,sda-all,samples/GSE249403/GSM7946802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946803,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,neonatal or infant,age rule: postnatal day,neonatal or infant,P7,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2587,55357,counts,um,1.0,verified,True,H&E,4.2972210257630294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946803,,,val,sda-all,samples/GSE249403/GSM7946803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946804,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,neonatal or infant,age rule: postnatal day,neonatal or infant,P7,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2558,55357,counts,um,1.0,verified,True,H&E,4.2941266994590475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946804,,,val,sda-all,samples/GSE249403/GSM7946804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946805,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2958,55357,counts,um,1.0,verified,True,H&E,4.067997459082854,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946805,,,val,sda-all,samples/GSE249403/GSM7946805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946806,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2816,55357,counts,um,1.0,verified,True,H&E,4.068311511074861,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946806,,,val,sda-all,samples/GSE249403/GSM7946806,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7946807,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2905,55357,counts,um,1.0,verified,True,H&E,4.072800677899719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946807,,,val,sda-all,samples/GSE249403/GSM7946807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7946808,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2874,55357,counts,um,1.0,verified,True,H&E,4.072396309426684,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946808,,,val,sda-all,samples/GSE249403/GSM7946808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946809,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2924,55357,counts,um,1.0,verified,True,H&E,4.300327509474562,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946809,,,val,sda-all,samples/GSE249403/GSM7946809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946810,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2967,55357,counts,um,1.0,verified,True,H&E,4.073620875615545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946810,,,val,sda-all,samples/GSE249403/GSM7946810,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946811,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2932,55357,counts,um,1.0,verified,True,H&E,4.074655972300991,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946811,,,val,sda-all,samples/GSE249403/GSM7946811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7946812,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3003,55357,counts,um,1.0,verified,True,H&E,4.300456784301363,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946812,,,val,sda-all,samples/GSE249403/GSM7946812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946813,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2508,55357,counts,um,1.0,verified,True,H&E,4.071323448795545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946813,,,val,sda-all,samples/GSE249403/GSM7946813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946814,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2494,55357,counts,um,1.0,verified,True,H&E,4.070560562436795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946814,,,val,sda-all,samples/GSE249403/GSM7946814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946815,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2978,55357,counts,um,1.0,verified,True,H&E,4.0714104153920925,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946815,,,val,sda-all,samples/GSE249403/GSM7946815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM7946816,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3009,55357,counts,um,1.0,verified,True,H&E,4.296695244196369,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946816,,,val,sda-all,samples/GSE249403/GSM7946816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946817,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2377,55357,counts,um,1.0,verified,True,H&E,4.070710749847536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946817,,,val,sda-all,samples/GSE249403/GSM7946817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946818,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2441,55357,counts,um,1.0,verified,True,H&E,4.071541812019311,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946818,,,val,sda-all,samples/GSE249403/GSM7946818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946819,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2819,55357,counts,um,1.0,verified,True,H&E,4.072059938856276,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946819,,,val,sda-all,samples/GSE249403/GSM7946819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946820,GSE249403+GSE249405,GSE249403,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,adult,age rule: postnatal day,juvenile,P56,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2930,55357,counts,um,1.0,verified,True,H&E,4.298114146573785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946820,,,val,sda-all,samples/GSE249403/GSM7946820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7962127,GSE249729,GSE249729,Spatial transcriptomics data of HS lesional skin and healthy skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,,,disease,luna,hidradenitis suppurativa,HS lesional skin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3766,17943,counts,pixel,4.000000160000006,platform_constant,True,H&E,4.000000160000006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38113104,,GSM7962127,,,train,hesrt,samples/GSE249729/GSM7962127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7962128,GSE249729,GSE249729,Spatial transcriptomics data of HS lesional skin and healthy skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,,,disease,luna,hidradenitis suppurativa,HS lesional skin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4437,17943,counts,pixel,3.993420950799328,platform_constant,True,H&E,3.993420950799328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38113104,,GSM7962128,,,train,hesrt,samples/GSE249729/GSM7962128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM7962129,GSE249729,GSE249729,Spatial transcriptomics data of HS lesional skin and healthy skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Normal control skin,primary tissue,,,normal,luna,,Normal control skin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1815,17943,counts,pixel,3.885143604834801,platform_constant,True,H&E,3.885143604834801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38113104,,GSM7962129,,,train,hesrt,samples/GSE249729/GSM7962129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7964513,GSE249803+GSE249804,GSE249803,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,Undamaged,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3371,54232,counts,pixel,4.515757243632539,platform_constant,True,H&E,4.515757243632539,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964513,,,train,hesrt,samples/GSE249803/GSM7964513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7964514,GSE249803+GSE249804,GSE249803,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,PHx24h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3658,54232,counts,pixel,4.50443352271427,platform_constant,True,H&E,4.50443352271427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964514,,,train,hesrt,samples/GSE249803/GSM7964514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7964515,GSE249803+GSE249804,GSE249803,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,PHx48h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3080,54232,counts,pixel,4.509610335715777,platform_constant,True,H&E,4.509610335715777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964515,,,train,hesrt,samples/GSE249803/GSM7964515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7964516,GSE249803+GSE249804,GSE249803,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,CCl4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2827,54232,counts,pixel,4.508963290416954,platform_constant,True,H&E,4.508963290416954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964516,,,train,hesrt,samples/GSE249803/GSM7964516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7968251,GSE249965,GSE249965,Spatial transcriptomics of primary human hepatoblastomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3212,17943,counts,pixel,4.370865117913649,platform_constant,True,H&E,4.370865117913649,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567523,,GSM7968251,,,train,hesrt,samples/GSE249965/GSM7968251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7968252,GSE249965,GSE249965,Spatial transcriptomics of primary human hepatoblastomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1350,17943,counts,pixel,4.8094019244333985,platform_constant,True,H&E,4.8094019244333985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567523,,GSM7968252,,,train,hesrt,samples/GSE249965/GSM7968252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7968253,GSE249965,GSE249965,Spatial transcriptomics of primary human hepatoblastomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Normal liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1729,17943,counts,pixel,4.807111908562388,platform_constant,True,H&E,4.807111908562388,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567523,,GSM7968253,,,train,hesrt,samples/GSE249965/GSM7968253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.28, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7974475,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,883,17943,counts,pixel,4.2799998866656095,platform_constant,True,H&E,4.2799998866656095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974475,,,train,hesrt,samples/GSE250138/GSM7974475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974476,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,724,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974476,,,train,hesrt,samples/GSE250138/GSM7974476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974477,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,388,17943,counts,pixel,4.275714031950661,platform_constant,True,H&E,4.275714031950661,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974477,,,train,hesrt,samples/GSE250138/GSM7974477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974478,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,624,17943,counts,pixel,4.278571638221454,platform_constant,True,H&E,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974478,,,train,hesrt,samples/GSE250138/GSM7974478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974479,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,686,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974479,,,train,hesrt,samples/GSE250138/GSM7974479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974480,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,537,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974480,,,train,hesrt,samples/GSE250138/GSM7974480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974481,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,869,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974481,,,train,hesrt,samples/GSE250138/GSM7974481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7974482,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,719,17943,counts,pixel,4.278571638221454,platform_constant,True,H&E,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974482,,,train,hesrt,samples/GSE250138/GSM7974482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974483,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,698,17943,counts,pixel,4.2799998866656095,platform_constant,True,H&E,4.2799998866656095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974483,,,train,hesrt,samples/GSE250138/GSM7974483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974484,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,999,17943,counts,pixel,4.278571638221454,platform_constant,True,H&E,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974484,,,train,hesrt,samples/GSE250138/GSM7974484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7974485,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,580,17943,counts,pixel,4.275714031950681,platform_constant,True,H&E,4.275714031950681,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974485,,,train,hesrt,samples/GSE250138/GSM7974485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974486,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,484,17943,counts,pixel,4.278571638221433,platform_constant,True,H&E,4.278571638221433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974486,,,train,hesrt,samples/GSE250138/GSM7974486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974487,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,469,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974487,,,train,hesrt,samples/GSE250138/GSM7974487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974488,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,549,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974488,,,train,hesrt,samples/GSE250138/GSM7974488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974489,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,749,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974489,,,train,hesrt,samples/GSE250138/GSM7974489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974490,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,724,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974490,,,train,hesrt,samples/GSE250138/GSM7974490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974491,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,944,17943,counts,pixel,4.278571638221433,platform_constant,True,H&E,4.278571638221433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974491,,,train,hesrt,samples/GSE250138/GSM7974491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974492,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,489,17943,counts,pixel,4.278571638221454,platform_constant,True,H&E,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974492,,,train,hesrt,samples/GSE250138/GSM7974492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974493,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,696,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974493,,,train,hesrt,samples/GSE250138/GSM7974493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974494,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0002462,glomerulonephritis,disease,luna,ANCA-associated glomerulonephritis,ANCA-GN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,632,17943,counts,pixel,4.277142870017056,platform_constant,True,H&E,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974494,,,train,hesrt,samples/GSE250138/GSM7974494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974495,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2997,17943,counts,pixel,4.227525725602321,platform_constant,True,H&E,4.227525725602321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974495,,,train,hesrt,samples/GSE250138/GSM7974495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974496,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3047,17943,counts,pixel,4.227525725602321,platform_constant,True,H&E,4.227525725602321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974496,,,train,hesrt,samples/GSE250138/GSM7974496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974497,GSE250138,GSE250138,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3609,17943,counts,pixel,4.228655344017829,platform_constant,True,H&E,4.228655344017829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974497,,,train,hesrt,samples/GSE250138/GSM7974497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974884,GSE250163,GSE250163,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,clear Cell Renal Cell Carcinoma,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear Cell Renal Cell Carcinoma,Stage III,aged,age rule: bare number read as years,aged,72,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1659,17943,counts,pixel,4.472133090263434,platform_constant,True,H&E,4.472133090263434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974884,,,test,hesrt,samples/GSE250163/GSM7974884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7974885,GSE250163,GSE250163,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,clear Cell Renal Cell Carcinoma,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear Cell Renal Cell Carcinoma,Stage III,aged,age rule: bare number read as years,aged,77,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3239,17943,counts,pixel,5.024209358646083,platform_constant,True,H&E,5.024209358646083,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974885,,,test,hesrt,samples/GSE250163/GSM7974885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7974886,GSE250163,GSE250163,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,clear Cell Renal Cell Carcinoma,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear Cell Renal Cell Carcinoma,Stage III,adult,age rule: bare number read as years,adult,51,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3076,17943,counts,pixel,4.657516317625369,platform_constant,True,H&E,4.657516317625369,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974886,,,test,hesrt,samples/GSE250163/GSM7974886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7974887,GSE250163,GSE250163,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,clear Cell Renal Cell Carcinoma,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear Cell Renal Cell Carcinoma,Stage III,adult,age rule: bare number read as years,adult,61,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2258,17943,counts,pixel,4.657516317625344,platform_constant,True,H&E,4.657516317625344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974887,,,test,hesrt,samples/GSE250163/GSM7974887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7974888,GSE250163,GSE250163,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,clear Cell Renal Cell Carcinoma,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,clear Cell Renal Cell Carcinoma,Stage III,adult,age rule: bare number read as years,adult,50,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3388,17943,counts,pixel,4.657516317625344,platform_constant,True,H&E,4.657516317625344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974888,,,test,hesrt,samples/GSE250163/GSM7974888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7990532,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,73785,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999885247406591,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990532,,,train,sda-all,samples/GSE250346/GSM7990532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990533,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,48,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,34998,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999742692466035,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990533,,,train,sda-all,samples/GSE250346/GSM7990533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990534,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,54,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,52165,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990534,,,train,sda-all,samples/GSE250346/GSM7990534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990535,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,40810,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990535,,,train,sda-all,samples/GSE250346/GSM7990535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990536,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,38293,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990536,,,train,sda-all,samples/GSE250346/GSM7990536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990537,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,31,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,23758,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999671214861088,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990537,,,train,sda-all,samples/GSE250346/GSM7990537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990538,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,64,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,12578,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499993830207305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990538,,,train,sda-all,samples/GSE250346/GSM7990538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990539,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,40,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,14940,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000390625000001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990539,,,train,sda-all,samples/GSE250346/GSM7990539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990540,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,12915,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499993830207305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990540,,,train,sda-all,samples/GSE250346/GSM7990540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990541,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,31189,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500006867188573,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990541,,,train,sda-all,samples/GSE250346/GSM7990541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990542,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,58,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,34750,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999823217442545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990542,,,train,sda-all,samples/GSE250346/GSM7990542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990543,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,58,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,27973,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965668772315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990543,,,train,sda-all,samples/GSE250346/GSM7990543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990544,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,69,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43183,529,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990544,,,train,sda-all,samples/GSE250346/GSM7990544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990545,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,69,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,38984,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000143867148964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990545,,,train,sda-all,samples/GSE250346/GSM7990545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7990546,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,66,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,24843,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000257484207635,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990546,,,train,sda-all,samples/GSE250346/GSM7990546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM7990547,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,66,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22585,518,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990547,,,train,sda-all,samples/GSE250346/GSM7990547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM7990548,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,66,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,140997,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000144675925925,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990548,,,train,sda-all,samples/GSE250346/GSM7990548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM7990549,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,63,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,72153,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999734857412208,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990549,,,train,sda-all,samples/GSE250346/GSM7990549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990550,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,133369,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999793268833204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990550,,,train,sda-all,samples/GSE250346/GSM7990550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990551,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,108131,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000091827364554,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990551,,,train,sda-all,samples/GSE250346/GSM7990551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990552,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,52,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,32868,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862693944803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990552,,,train,sda-all,samples/GSE250346/GSM7990552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990553,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,52,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22983,521,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990553,,,train,sda-all,samples/GSE250346/GSM7990553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990554,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,45690,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000154469312097,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990554,,,train,sda-all,samples/GSE250346/GSM7990554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990555,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,35179,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998969011429245,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990555,,,train,sda-all,samples/GSE250346/GSM7990555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990556,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,26396,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000343218012081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990556,,,train,sda-all,samples/GSE250346/GSM7990556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990557,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,16431,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041118421052,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990557,,,train,sda-all,samples/GSE250346/GSM7990557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7990558,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019338;MONDO:0015925,sarcoidosis;interstitial lung disease,disease,luna,,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,59609,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999823217442545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990558,,,train,sda-all,samples/GSE250346/GSM7990558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990559,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019338;MONDO:0015925,sarcoidosis;interstitial lung disease,disease,luna,,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,46277,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862693944803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990559,,,train,sda-all,samples/GSE250346/GSM7990559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8505448,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,27726,475,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505448,,,train,sda-all,samples/GSE250346/GSM8505448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505449,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,13287,435,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505449,,,train,sda-all,samples/GSE250346/GSM8505449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8505450,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,63,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,55542,528,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505450,,,train,sda-all,samples/GSE250346/GSM8505450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505451,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,32170,494,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505451,,,train,sda-all,samples/GSE250346/GSM8505451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505452,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,67,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,27533,497,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505452,,,train,sda-all,samples/GSE250346/GSM8505452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505453,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,37924,516,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505453,,,train,sda-all,samples/GSE250346/GSM8505453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505454,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,66,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,26521,490,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505454,,,train,sda-all,samples/GSE250346/GSM8505454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8505455,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,67,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,24071,466,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505455,,,train,sda-all,samples/GSE250346/GSM8505455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505456,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771;MONDO:0800504,pulmonary fibrosis;idiopathic pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,57958,532,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505456,,,train,sda-all,samples/GSE250346/GSM8505456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505457,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,58,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,43900,530,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505457,,,train,sda-all,samples/GSE250346/GSM8505457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505458,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, unaffected",primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,58,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8006,420,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505458,,,train,sda-all,samples/GSE250346/GSM8505458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505459,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, unaffected",primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,27074,485,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505459,,,train,sda-all,samples/GSE250346/GSM8505459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8505460,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, unaffected",primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,20364,446,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505460,,,train,sda-all,samples/GSE250346/GSM8505460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505461,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,aged,age rule: bare number read as years,aged,66,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,48565,486,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505461,,,train,sda-all,samples/GSE250346/GSM8505461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8505462,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,18743,438,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505462,,,train,sda-all,samples/GSE250346/GSM8505462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505463,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, less affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,62,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,42066,512,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505463,,,train,sda-all,samples/GSE250346/GSM8505463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505464,GSE250346,GSE250346,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,"Lung, more affected",primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,88753,512,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505464,,,train,sda-all,samples/GSE250346/GSM8505464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7978617,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000170,pair of lungs,lungs,primary tissue,,,disease,luna,,"bleomycin, post-injury day 14",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2831,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978617,,,train,hesrt,samples/GSE250398/GSM7978617,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.44, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM7978618,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000170,pair of lungs,lungs,primary tissue,,,disease,luna,,"bleomycin, post-injury day 35",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3048,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978618,,,train,hesrt,samples/GSE250398/GSM7978618,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM7978619,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lungs,primary tissue,,,disease,luna,,"bleomycin, post-injury day 14",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2775,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978619,,,train,hesrt,samples/GSE250398/GSM7978619,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM7978620,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000170,pair of lungs,lungs,primary tissue,,,disease,luna,,"bleomycin, post-injury day 35",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2013,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978620,,,train,hesrt,samples/GSE250398/GSM7978620,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.59, ""life_stage"": 0.6900000000000001}",uberon,low_confidence_annotation
GSM7978621,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000170,pair of lungs,lungs,primary tissue,,,normal,luna,,"control, post-injury day 0",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2086,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978621,,,train,hesrt,samples/GSE250398/GSM7978621,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7978622,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lungs,primary tissue,,,disease,luna,,"bleomycin, post-injury day 35",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2436,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978622,,,train,hesrt,samples/GSE250398/GSM7978622,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.47000000000000003, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM7978623,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000170,pair of lungs,lungs,primary tissue,,,disease,luna,,"bleomycin, post-injury day 14",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3464,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978623,,,train,hesrt,samples/GSE250398/GSM7978623,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM7978624,GSE250398,GSE250398,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000170,pair of lungs,lungs,primary tissue,,,normal,luna,,"control, post-injury day 0",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2848,32285,counts,pixel,0.7633365385053724,platform_constant,True,H&E,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978624,,,train,hesrt,samples/GSE250398/GSM7978624,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.59, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7980860,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,,,normal,luna,,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3401,36601,counts,pixel,3.898750084115541,platform_constant,True,H&E,3.898750084115541,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980860,,,train,hesrt,samples/GSE250521/GSM7980860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980861,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,,,normal,luna,,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3839,36601,counts,pixel,3.9500000306125242,platform_constant,True,H&E,3.9500000306125242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980861,,,train,hesrt,samples/GSE250521/GSM7980861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980862,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,,,normal,luna,,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4547,36601,counts,pixel,3.9346733920160775,platform_constant,True,H&E,3.9346733920160775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980862,,,train,hesrt,samples/GSE250521/GSM7980862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980863,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,primary tissue,,,normal,luna,,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3030,36601,counts,pixel,3.9201003116036954,platform_constant,True,H&E,3.9201003116036954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980863,,,train,hesrt,samples/GSE250521/GSM7980863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980864,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2270,36601,counts,pixel,3.8867497513840545,platform_constant,True,H&E,3.8867497513840545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980864,,,train,hesrt,samples/GSE250521/GSM7980864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980865,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4952,36601,counts,pixel,4.036180775881461,platform_constant,True,H&E,4.036180775881461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980865,,,train,hesrt,samples/GSE250521/GSM7980865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980866,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4524,36601,counts,pixel,3.8331174983489826,platform_constant,True,H&E,3.8331174983489826,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980866,,,train,hesrt,samples/GSE250521/GSM7980866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980867,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4748,36601,counts,pixel,3.9052241708332693,platform_constant,True,H&E,3.9052241708332693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980867,,,train,hesrt,samples/GSE250521/GSM7980867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980868,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Locally advanced papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1520,36601,counts,pixel,3.9102503694209068,platform_constant,True,H&E,3.9102503694209068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980868,,,train,hesrt,samples/GSE250521/GSM7980868,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980869,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Locally advanced papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4174,36601,counts,pixel,4.177959255555863,platform_constant,True,H&E,4.177959255555863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980869,,,train,hesrt,samples/GSE250521/GSM7980869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980870,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Locally advanced papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4633,36601,counts,pixel,4.0943180200926195,platform_constant,True,H&E,4.0943180200926195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980870,,,train,hesrt,samples/GSE250521/GSM7980870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980871,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0005075,thyroid gland papillary carcinoma,disease,luna,Locally advanced papillary thyroid carcinoma,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4737,36601,counts,pixel,4.317873153697997,platform_constant,True,H&E,4.317873153697997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980871,,,train,hesrt,samples/GSE250521/GSM7980871,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980872,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0006468,thyroid gland undifferentiated (anaplastic) carcinoma,disease,luna,Anaplastic thyroid cancer,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4722,36601,counts,pixel,3.874578937848402,platform_constant,True,H&E,3.874578937848402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980872,,,train,hesrt,samples/GSE250521/GSM7980872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980873,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0006468,thyroid gland undifferentiated (anaplastic) carcinoma,disease,luna,Anaplastic thyroid cancer,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2684,36601,counts,pixel,3.9460731879207307,platform_constant,True,H&E,3.9460731879207307,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980873,,,train,hesrt,samples/GSE250521/GSM7980873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7980874,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0006468,thyroid gland undifferentiated (anaplastic) carcinoma,disease,luna,Anaplastic thyroid cancer,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1622,36601,counts,pixel,4.046413066516737,platform_constant,True,H&E,4.046413066516737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980874,,,train,hesrt,samples/GSE250521/GSM7980874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980875,GSE250521,GSE250521,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,thyroid,luna,UBERON:0002046,thyroid gland,Thyroid,tumour tissue,MONDO:0006468,thyroid gland undifferentiated (anaplastic) carcinoma,disease,luna,Anaplastic thyroid cancer,none,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2594,36601,counts,pixel,3.9914143782646585,platform_constant,True,H&E,3.9914143782646585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980875,,,train,hesrt,samples/GSE250521/GSM7980875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7983358,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,Melanoma leptomeningeal metastasis (LMM),metastasis,MONDO:0700219;MONDO:0005105,neoplastic meningitis;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:B,B,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,520,36601,counts,pixel,4.04038458778878,platform_constant,True,H&E,4.04038458778878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983358,,,train,hesrt,samples/GSE250636/GSM7983358,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7983359,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0000975,sternum,Melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:A,A,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1667,36601,counts,pixel,3.986538441964556,platform_constant,True,H&E,3.986538441964556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983359,,,train,hesrt,samples/GSE250636/GSM7983359,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7983360,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Melanoma leptomeningeal metastasis (LMM),metastasis,MONDO:0700219;MONDO:0005105,neoplastic meningitis;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:A,A,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3787,36601,counts,pixel,4.0365385173839705,platform_constant,True,H&E,4.0365385173839705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983360,,,train,hesrt,samples/GSE250636/GSM7983360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7983361,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Melanoma leptomeningeal metastasis (LMM),metastasis,MONDO:0700219;MONDO:0005105,neoplastic meningitis;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:B,B,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2577,36601,counts,pixel,4.271153715242976,platform_constant,True,H&E,4.271153715242976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983361,,,train,hesrt,samples/GSE250636/GSM7983361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7983362,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Melanoma leptomeningeal metastasis (LMM),metastasis,MONDO:0700219;MONDO:0005105,neoplastic meningitis;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:B,B,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,637,36601,counts,pixel,4.007692300478453,platform_constant,True,H&E,4.007692300478453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983362,,,train,hesrt,samples/GSE250636/GSM7983362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7983363,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,Melanoma leptomeningeal metastasis (LMM),metastasis,MONDO:0700219;MONDO:0005105,neoplastic meningitis;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:B,B,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,769,36601,counts,pixel,4.042307632481531,platform_constant,True,H&E,4.042307632481531,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983363,,,train,hesrt,samples/GSE250636/GSM7983363,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 0.99}",,
GSM7983364,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:B,B,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,840,36601,counts,pixel,4.046153855540924,platform_constant,True,H&E,4.046153855540924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983364,,,train,hesrt,samples/GSE250636/GSM7983364,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7983365,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0016435,chest wall,Melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:B,B,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1789,36601,counts,pixel,4.028846313992795,platform_constant,True,H&E,4.028846313992795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983365,,,train,hesrt,samples/GSE250636/GSM7983365,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7983366,GSE250636,GSE250636,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE250636:A,A,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3263,36601,counts,pixel,4.334615317775617,platform_constant,True,H&E,4.334615317775617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983366,,,train,hesrt,samples/GSE250636/GSM7983366,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7986081,GSE251693,GSE251693,Double-negative B cells and DNASE1L3 colocalise with microbiota in gut-associated lymphoid tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,healthy,healthy,not stated,luna,not stated,,unknown,not stated,,GSE251693:FFPE block STA,FFPE block STA,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3408,17943,counts,pixel,4.110449198464235,platform_constant,True,H&E,4.110449198464235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744839,,GSM7986081,,,train,hesrt,samples/GSE251693/GSM7986081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7986082,GSE251693,GSE251693,Double-negative B cells and DNASE1L3 colocalise with microbiota in gut-associated lymphoid tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,healthy,healthy,not stated,luna,not stated,,unknown,not stated,,GSE251693:FFPE block STB,FFPE block STB,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2351,17943,counts,pixel,3.954093440915004,platform_constant,True,H&E,3.954093440915004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744839,,GSM7986082,,,train,hesrt,samples/GSE251693/GSM7986082,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990100,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,55400,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990100,,,train,sda-all,samples/GSE251926/GSM7990100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990101,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,52405,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990101,,,train,sda-all,samples/GSE251926/GSM7990101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990102,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,77868,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990102,,,train,sda-all,samples/GSE251926/GSM7990102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990103,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,47217,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990103,,,train,sda-all,samples/GSE251926/GSM7990103,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990104,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,38555,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990104,,,train,sda-all,samples/GSE251926/GSM7990104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990105,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,27542,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990105,,,train,sda-all,samples/GSE251926/GSM7990105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990106,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,54899,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990106,,,train,sda-all,samples/GSE251926/GSM7990106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990107,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,67206,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990107,,,train,sda-all,samples/GSE251926/GSM7990107,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990108,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,70879,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990108,,,train,sda-all,samples/GSE251926/GSM7990108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990109,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,80288,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990109,,,train,sda-all,samples/GSE251926/GSM7990109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990110,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,39167,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990110,,,train,sda-all,samples/GSE251926/GSM7990110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990111,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,66389,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990111,,,train,sda-all,samples/GSE251926/GSM7990111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990112,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,68177,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990112,,,train,sda-all,samples/GSE251926/GSM7990112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990113,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,39646,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990113,,,train,sda-all,samples/GSE251926/GSM7990113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990114,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,82583,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990114,,,train,sda-all,samples/GSE251926/GSM7990114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990115,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,63661,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990115,,,train,sda-all,samples/GSE251926/GSM7990115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990116,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,68138,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990116,,,train,sda-all,samples/GSE251926/GSM7990116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990117,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,57057,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990117,,,train,sda-all,samples/GSE251926/GSM7990117,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990118,GSE251926,GSE251926,Open-ST: High-resolution spatial transcriptomics in 3D,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,human metastatic level III cervical lymph node from 56-year old male with HNSCC,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Other,release v3,Open-ST,sequencing-based,other,,,cell,40692,28943,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,38917789,,GSM7990118,,,train,sda-all,samples/GSE251926/GSM7990118,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990295,GSE251938,GSE251938,Single-cell and In Situ Spatial Transcriptomics of Marjolin ulcers,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Marjolin's ulcer,tumour tissue,MONDO:0043839;MONDO:0043519,ulcer disease;burn,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,467969,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39128494,,GSM7990295,,,train,sda-all,samples/GSE251938/GSM7990295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990473,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3834,36601,counts,pixel,4.210239215857161,platform_constant,True,H&E,4.210239215857161,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990473,,,train,hesrt,samples/GSE251950/GSM7990473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7990474,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4274,36601,counts,pixel,4.028525425404048,platform_constant,True,H&E,4.028525425404048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990474,,,train,hesrt,samples/GSE251950/GSM7990474,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7990475,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3043,36601,counts,pixel,3.99166183320689,platform_constant,True,H&E,3.99166183320689,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990475,,,train,hesrt,samples/GSE251950/GSM7990475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7990476,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4244,36601,counts,pixel,3.9008485164826086,platform_constant,True,H&E,3.9008485164826086,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990476,,,train,hesrt,samples/GSE251950/GSM7990476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990477,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3577,36601,counts,pixel,4.039648976193794,platform_constant,True,H&E,4.039648976193794,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990477,,,train,hesrt,samples/GSE251950/GSM7990477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7990478,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2426,36601,counts,pixel,3.920107830988812,platform_constant,True,H&E,3.920107830988812,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990478,,,train,hesrt,samples/GSE251950/GSM7990478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990479,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Gastric Cancer Metastasis,metastasis,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer Metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2483,36601,counts,pixel,4.049560191014317,platform_constant,True,H&E,4.049560191014317,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990479,,,train,hesrt,samples/GSE251950/GSM7990479,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7990480,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1882,36601,counts,pixel,3.8924644867121243,platform_constant,True,H&E,3.8924644867121243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990480,,,train,hesrt,samples/GSE251950/GSM7990480,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990481,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3037,36601,counts,pixel,4.008508606517139,platform_constant,True,H&E,4.008508606517139,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990481,,,train,hesrt,samples/GSE251950/GSM7990481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990482,GSE251950,GSE251950,Spatial transcriptomics of gastric cancers (Visium 10X platform),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric Cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Gastric Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3491,36601,counts,pixel,3.9707450390309296,platform_constant,True,H&E,3.9707450390309296,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990482,,,train,hesrt,samples/GSE251950/GSM7990482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7993541,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,22156,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993541,,,val,sda-all,samples/GSE252090/GSM7993541,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993542,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,9948,98,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993542,,,val,sda-all,samples/GSE252090/GSM7993542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993543,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,40985,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993543,,,val,sda-all,samples/GSE252090/GSM7993543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993544,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,32878,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993544,,,val,sda-all,samples/GSE252090/GSM7993544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7993545,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,10485,100,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993545,,,val,sda-all,samples/GSE252090/GSM7993545,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993546,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,10656,98,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993546,,,val,sda-all,samples/GSE252090/GSM7993546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993547,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,14283,100,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993547,,,val,sda-all,samples/GSE252090/GSM7993547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993548,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,10210,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993548,,,val,sda-all,samples/GSE252090/GSM7993548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993549,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,1914,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993549,,,val,sda-all,samples/GSE252090/GSM7993549,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993550,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,15120,100,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993550,,,val,sda-all,samples/GSE252090/GSM7993550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993551,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,4519,97,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993551,,,val,sda-all,samples/GSE252090/GSM7993551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993552,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,13591,100,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993552,,,val,sda-all,samples/GSE252090/GSM7993552,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993553,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,7084,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993553,,,val,sda-all,samples/GSE252090/GSM7993553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993554,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,9052,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993554,,,val,sda-all,samples/GSE252090/GSM7993554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993555,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,5743,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993555,,,val,sda-all,samples/GSE252090/GSM7993555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993556,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,13004,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993556,,,val,sda-all,samples/GSE252090/GSM7993556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993557,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,6206,99,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993557,,,val,sda-all,samples/GSE252090/GSM7993557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993558,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,17905,119,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993558,,,val,sda-all,samples/GSE252090/GSM7993558,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993559,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,8547,115,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993559,,,val,sda-all,samples/GSE252090/GSM7993559,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993560,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,18026,120,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993560,,,val,sda-all,samples/GSE252090/GSM7993560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993561,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,4972,114,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993561,,,val,sda-all,samples/GSE252090/GSM7993561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993562,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,9726,119,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993562,,,val,sda-all,samples/GSE252090/GSM7993562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993563,GSE252090,GSE252090,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Tumor,tumour tissue,MONDO:0007959,medulloblastoma,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Molecular Cartography,GEO series text (assay_final.csv),Molecular Cartography,imaging-based,other,,,cell,28106,119,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993563,,,val,sda-all,samples/GSE252090/GSM7993563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7993714,GSE252108+GSE252113,GSE252108,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses [I],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,ACC,tumour tissue,MONDO:0006639,adrenal cortex carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1113,36601,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,,,,GSM7993714,,,train,sda-all,samples/GSE252108/GSM7993714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7993715,GSE252108+GSE252113,GSE252108,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses [I],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,ACC,tumour tissue,MONDO:0006639,adrenal cortex carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1165,36601,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,,,,GSM7993715,,,train,sda-all,samples/GSE252108/GSM7993715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM7993713,GSE252113,GSE252113,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,ACC,tumour tissue,MONDO:0006639,adrenal cortex carcinoma,disease,luna,adrenocortical carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1418,36601,counts,pixel,0.2538038367105339,platform_constant,True,H&E,0.4999911874291707,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993713,,,train,hesrt,samples/GSE252113/GSM7993713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 0.99}",,
GSM7993716,GSE252113,GSE252113,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,ACC,tumour tissue,MONDO:0006639,adrenal cortex carcinoma,disease,luna,adrenocortical carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1734,36601,counts,pixel,0.2538038367105339,platform_constant,True,H&E,0.5000084879572054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993716,,,train,hesrt,samples/GSE252113/GSM7993716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM7993717,GSE252113,GSE252113,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Normal Adrenal gland,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1734,36601,counts,pixel,0.2732199644969258,platform_constant,True,H&E,0.4999956798644899,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993717,,,train,hesrt,samples/GSE252113/GSM7993717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993718,GSE252113,GSE252113,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Normal Adrenal gland,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1939,36601,counts,pixel,0.2732199644969258,platform_constant,True,H&E,0.49998911713501887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993718,,,train,hesrt,samples/GSE252113/GSM7993718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7993719,GSE252113,GSE252113,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Normal Adrenal gland,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1400,36601,counts,pixel,0.2732199644969258,platform_constant,True,H&E,0.49998911713501887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993719,,,train,hesrt,samples/GSE252113/GSM7993719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996201,GSE252176,GSE252176,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3207,58825,counts,pixel,4.178250168884879,platform_constant,True,H&E,4.178250168884879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996201,,,val,hesrt,samples/GSE252176/GSM7996201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996202,GSE252176,GSE252176,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3023,58825,counts,pixel,4.132750048012227,platform_constant,True,H&E,4.132750048012227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996202,,,val,hesrt,samples/GSE252176/GSM7996202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996203,GSE252176,GSE252176,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3906,58825,counts,pixel,4.150249869113583,platform_constant,True,H&E,4.150249869113583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996203,,,val,hesrt,samples/GSE252176/GSM7996203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996204,GSE252176,GSE252176,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast tissue,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,triple negative breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3484,58825,counts,pixel,4.223749943190578,platform_constant,True,H&E,4.223749943190578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996204,,,val,hesrt,samples/GSE252176/GSM7996204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013395,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1880,33538,counts,pixel,3.963835824936114,platform_constant,True,H&E,3.963835824936114,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013395,,,test,hesrt,samples/GSE253080/GSM8013395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013396,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1817,33538,counts,pixel,4.042876524840361,platform_constant,True,H&E,4.042876524840361,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013396,,,test,hesrt,samples/GSE253080/GSM8013396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013397,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2449,33538,counts,pixel,3.98780835266996,platform_constant,True,H&E,3.98780835266996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013397,,,test,hesrt,samples/GSE253080/GSM8013397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013398,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2360,33538,counts,pixel,4.050000133629758,platform_constant,True,H&E,4.050000133629758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013398,,,test,hesrt,samples/GSE253080/GSM8013398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013399,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1428,33538,counts,pixel,4.03278673683935,platform_constant,True,H&E,4.03278673683935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013399,,,test,hesrt,samples/GSE253080/GSM8013399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013400,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2708,33538,counts,pixel,3.9787317860061173,platform_constant,True,H&E,3.9787317860061173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013400,,,test,hesrt,samples/GSE253080/GSM8013400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013401,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2293,33538,counts,pixel,4.039401916199206,platform_constant,True,H&E,4.039401916199206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013401,,,test,hesrt,samples/GSE253080/GSM8013401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013402,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3417,33538,counts,pixel,4.0902850427046715,platform_constant,True,H&E,4.0902850427046715,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013402,,,test,hesrt,samples/GSE253080/GSM8013402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013403,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4181,33538,counts,pixel,4.16419195602892,platform_constant,True,H&E,4.16419195602892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013403,,,test,hesrt,samples/GSE253080/GSM8013403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013404,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2953,33538,counts,pixel,4.043032364287294,platform_constant,True,H&E,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013404,,,test,hesrt,samples/GSE253080/GSM8013404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013405,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3394,33538,counts,pixel,4.043032364287294,platform_constant,True,H&E,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013405,,,test,hesrt,samples/GSE253080/GSM8013405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013406,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3298,33538,counts,pixel,4.015027456004419,platform_constant,True,H&E,4.015027456004419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013406,,,test,hesrt,samples/GSE253080/GSM8013406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013407,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3837,33538,counts,pixel,4.032450976540404,platform_constant,True,H&E,4.032450976540404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013407,,,test,hesrt,samples/GSE253080/GSM8013407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013408,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1841,33538,counts,pixel,4.043032364287294,platform_constant,True,H&E,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013408,,,test,hesrt,samples/GSE253080/GSM8013408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013409,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2851,33538,counts,pixel,4.043032364287294,platform_constant,True,H&E,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013409,,,test,hesrt,samples/GSE253080/GSM8013409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013410,GSE253080,GSE253080,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,WHO Grade IV GBM,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,GSE253080:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3565,33538,counts,pixel,4.02144844353098,platform_constant,True,H&E,4.02144844353098,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013410,,,test,hesrt,samples/GSE253080/GSM8013410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016272,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Normal,adult,age rule: bare number read as years,adult,61,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2675,18085,counts,pixel,5.93744648376846,platform_constant,True,H&E,5.93744648376846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016272,,,train,hesrt,samples/GSE253199/GSM8016272,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016273,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Normal,adult,age rule: bare number read as years,adult,61,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3246,18085,counts,pixel,4.767706412858211,platform_constant,True,H&E,4.767706412858211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016273,,,train,hesrt,samples/GSE253199/GSM8016273,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016274,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Normal,adult,age rule: bare number read as years,adult,55,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4261,18085,counts,pixel,5.339285962295545,platform_constant,True,H&E,5.339285962295545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016274,,,train,hesrt,samples/GSE253199/GSM8016274,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016275,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Normal,adult,age rule: bare number read as years,adult,54,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3534,18085,counts,pixel,4.957491254021968,platform_constant,True,H&E,4.957491254021968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016275,,,train,hesrt,samples/GSE253199/GSM8016275,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016276,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Normal,adult,age rule: bare number read as years,adult,56,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2200,18085,counts,pixel,5.1397898605908265,platform_constant,True,H&E,5.1397898605908265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016276,,,train,hesrt,samples/GSE253199/GSM8016276,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016277,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Normal,adult,age rule: bare number read as years,adult,61,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3163,18085,counts,pixel,6.337452450238914,platform_constant,True,H&E,6.337452450238914,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016277,,,train,hesrt,samples/GSE253199/GSM8016277,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016278,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Obese,adult,age rule: bare number read as years,adult,58,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3085,18085,counts,pixel,5.157213520919152,platform_constant,True,H&E,5.157213520919152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016278,,,train,hesrt,samples/GSE253199/GSM8016278,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016279,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Obese,adult,age rule: bare number read as years,adult,57,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2996,18085,counts,pixel,5.731736706465835,platform_constant,True,H&E,5.731736706465835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016279,,,train,hesrt,samples/GSE253199/GSM8016279,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016280,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Obese,adult,age rule: bare number read as years,adult,55,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2058,18085,counts,pixel,5.143046337802123,platform_constant,True,H&E,5.143046337802123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016280,,,train,hesrt,samples/GSE253199/GSM8016280,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016281,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Obese,adult,age rule: bare number read as years,adult,60,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3855,18085,counts,pixel,4.956349283172621,platform_constant,True,H&E,4.956349283172621,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016281,,,train,hesrt,samples/GSE253199/GSM8016281,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016282,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Obese,adult,age rule: bare number read as years,adult,61,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2341,18085,counts,pixel,4.387388601971234,platform_constant,True,H&E,4.387388601971234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016282,,,train,hesrt,samples/GSE253199/GSM8016282,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016283,GSE253199+GSE253200,GSE253199,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0016400,infrapatellar fat pad,Infrapatellar Fat Pad,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,osteoarthritis,Obese,adult,age rule: bare number read as years,adult,57,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3034,18085,counts,pixel,5.142652491531132,platform_constant,True,H&E,5.142652491531132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016283,,,train,hesrt,samples/GSE253199/GSM8016283,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8019441,GSE253378,GSE253378,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Normal Lung,primary tissue,,,normal,luna,,,adult,age rule: age with unit,not stated,9 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2808,68886,counts,pixel,0.7246376811594203,platform_constant,True,H&E,0.7246376811594203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019441,,,train,hesrt,samples/GSE253378/GSM8019441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8019442,GSE253378,GSE253378,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung Fibrosis,primary tissue,,,disease,luna,lung fibrosis,,adult,age rule: age with unit,not stated,9 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3421,68886,counts,pixel,0.7246376811594203,platform_constant,True,H&E,0.7246376811594203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019442,,,train,hesrt,samples/GSE253378/GSM8019442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8019443,GSE253378,GSE253378,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,lung,luna,UBERON:0002048,lung,Lung Fibrosis Treated with hMSCs,primary tissue,,,disease,luna,lung fibrosis,"Therapy with Normal bone marrow derived hMSC, prepared from Lonza™",not stated,luna,not stated,9 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2916,68886,counts,pixel,0.7246376811594203,platform_constant,True,H&E,0.7246376811594203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019443,,,train,hesrt,samples/GSE253378/GSM8019443,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8019444,GSE253378,GSE253378,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung Fibrosis,primary tissue,,,disease,luna,lung fibrosis,,adult,age rule: age with unit,not stated,9 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3739,68886,counts,pixel,0.5076142131979695,platform_constant,True,H&E,0.5076142131979695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019444,,,train,hesrt,samples/GSE253378/GSM8019444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8019445,GSE253378,GSE253378,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,lung,luna,UBERON:0002048,lung,Lung Fibrosis Treated with hMSCs,primary tissue,,,disease,luna,lung fibrosis,"Therapy with Normal bone marrow derived hMSC, prepared from Lonza™",not stated,luna,not stated,9 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3208,68886,counts,pixel,0.5076142131979695,platform_constant,True,H&E,0.5076142131979695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019445,,,train,hesrt,samples/GSE253378/GSM8019445,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8020616,GSE253428,GSE253428,Spatial transcriptomic sequencing of day 7 tumors in G422TN-GBM model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain-G422TN-GBM,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2807,31432,counts,um,1.0,verified,True,H&E-like (heuristic),3.3606570410234076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42474078,,GSM8020616,,,train,sda-all,samples/GSE253428/GSM8020616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.8300000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8020736,GSE253439,GSE253439,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Three biopsies with minimal change disease,primary tissue,MONDO:0006835,minimal change disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,55061,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020736,,,train,sda-all,samples/GSE253439/GSM8020736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8020737,GSE253439,GSE253439,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Three biopsies with  IgA nephropathy,primary tissue,MONDO:0005342,IgA glomerulonephritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,68118,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020737,,,train,sda-all,samples/GSE253439/GSM8020737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8020738,GSE253439,GSE253439,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Three biopsies with  IgA nephropathy,primary tissue,MONDO:0005342,IgA glomerulonephritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,60170,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020738,,,train,sda-all,samples/GSE253439/GSM8020738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8020739,GSE253439,GSE253439,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Four nephrectomy samples  with advanced pyelonephritis,primary tissue,MONDO:0006939,pyelonephritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,65971,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020739,,,train,sda-all,samples/GSE253439/GSM8020739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021238,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2458,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021238,,,train,sda-all,samples/GSE253474/GSM8021238,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021239,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2717,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021239,,,train,sda-all,samples/GSE253474/GSM8021239,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021240,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,749,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021240,,,train,sda-all,samples/GSE253474/GSM8021240,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021241,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,602,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021241,,,train,sda-all,samples/GSE253474/GSM8021241,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021242,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1393,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021242,,,train,sda-all,samples/GSE253474/GSM8021242,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021243,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1759,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021243,,,train,sda-all,samples/GSE253474/GSM8021243,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021244,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,47,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021244,,,train,sda-all,samples/GSE253474/GSM8021244,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021245,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,39,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021245,,,train,sda-all,samples/GSE253474/GSM8021245,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021246,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1131,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021246,,,train,sda-all,samples/GSE253474/GSM8021246,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021247,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2014,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021247,,,train,sda-all,samples/GSE253474/GSM8021247,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021248,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1304,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021248,,,train,sda-all,samples/GSE253474/GSM8021248,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021249,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1940,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021249,,,train,sda-all,samples/GSE253474/GSM8021249,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021250,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1051,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021250,,,train,sda-all,samples/GSE253474/GSM8021250,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021251,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1478,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021251,,,train,sda-all,samples/GSE253474/GSM8021251,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021252,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,916,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021252,,,train,sda-all,samples/GSE253474/GSM8021252,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021253,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,833,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021253,,,train,sda-all,samples/GSE253474/GSM8021253,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021254,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2440,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021254,,,train,sda-all,samples/GSE253474/GSM8021254,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021255,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2851,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021255,,,train,sda-all,samples/GSE253474/GSM8021255,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021256,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,671,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021256,,,train,sda-all,samples/GSE253474/GSM8021256,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021257,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,944,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021257,,,train,sda-all,samples/GSE253474/GSM8021257,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021258,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,565,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021258,,,train,sda-all,samples/GSE253474/GSM8021258,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021259,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1232,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021259,,,train,sda-all,samples/GSE253474/GSM8021259,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021260,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1150,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021260,,,train,sda-all,samples/GSE253474/GSM8021260,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021261,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2297,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021261,,,train,sda-all,samples/GSE253474/GSM8021261,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021262,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,799,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021262,,,train,sda-all,samples/GSE253474/GSM8021262,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021263,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1134,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021263,,,train,sda-all,samples/GSE253474/GSM8021263,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021264,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,984,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021264,,,train,sda-all,samples/GSE253474/GSM8021264,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021265,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1018,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021265,,,train,sda-all,samples/GSE253474/GSM8021265,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021266,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1268,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021266,,,train,sda-all,samples/GSE253474/GSM8021266,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021267,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1148,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021267,,,train,sda-all,samples/GSE253474/GSM8021267,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021268,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,872,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021268,,,train,sda-all,samples/GSE253474/GSM8021268,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021269,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1954,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021269,,,train,sda-all,samples/GSE253474/GSM8021269,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021270,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2281,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021270,,,train,sda-all,samples/GSE253474/GSM8021270,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021271,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2918,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021271,,,train,sda-all,samples/GSE253474/GSM8021271,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021272,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,673,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021272,,,train,sda-all,samples/GSE253474/GSM8021272,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021273,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,744,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021273,,,train,sda-all,samples/GSE253474/GSM8021273,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021274,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1308,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021274,,,train,sda-all,samples/GSE253474/GSM8021274,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021275,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1257,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021275,,,train,sda-all,samples/GSE253474/GSM8021275,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021276,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,681,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021276,,,train,sda-all,samples/GSE253474/GSM8021276,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021277,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1040,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021277,,,train,sda-all,samples/GSE253474/GSM8021277,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021278,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,782,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021278,,,train,sda-all,samples/GSE253474/GSM8021278,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021279,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2343,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021279,,,train,sda-all,samples/GSE253474/GSM8021279,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021280,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1127,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021280,,,train,sda-all,samples/GSE253474/GSM8021280,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021281,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2054,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021281,,,train,sda-all,samples/GSE253474/GSM8021281,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021282,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,964,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021282,,,train,sda-all,samples/GSE253474/GSM8021282,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021283,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1578,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021283,,,train,sda-all,samples/GSE253474/GSM8021283,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021284,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,780,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021284,,,train,sda-all,samples/GSE253474/GSM8021284,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021285,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,993,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021285,,,train,sda-all,samples/GSE253474/GSM8021285,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021286,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2361,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021286,,,train,sda-all,samples/GSE253474/GSM8021286,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021287,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3106,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021287,,,train,sda-all,samples/GSE253474/GSM8021287,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021288,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,760,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021288,,,train,sda-all,samples/GSE253474/GSM8021288,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021289,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,924,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021289,,,train,sda-all,samples/GSE253474/GSM8021289,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021290,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,608,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021290,,,train,sda-all,samples/GSE253474/GSM8021290,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021291,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1228,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021291,,,train,sda-all,samples/GSE253474/GSM8021291,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021292,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1318,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021292,,,train,sda-all,samples/GSE253474/GSM8021292,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8021293,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2068,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021293,,,train,sda-all,samples/GSE253474/GSM8021293,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021294,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,882,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021294,,,train,sda-all,samples/GSE253474/GSM8021294,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021295,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1057,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021295,,,train,sda-all,samples/GSE253474/GSM8021295,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021296,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1160,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021296,,,train,sda-all,samples/GSE253474/GSM8021296,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021297,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1402,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021297,,,train,sda-all,samples/GSE253474/GSM8021297,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021298,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1645,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021298,,,train,sda-all,samples/GSE253474/GSM8021298,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021299,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,613,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021299,,,train,sda-all,samples/GSE253474/GSM8021299,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021300,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,943,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021300,,,train,sda-all,samples/GSE253474/GSM8021300,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021301,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2181,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021301,,,train,sda-all,samples/GSE253474/GSM8021301,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021302,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1170,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021302,,,train,sda-all,samples/GSE253474/GSM8021302,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021303,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1256,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021303,,,train,sda-all,samples/GSE253474/GSM8021303,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021304,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,437,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021304,,,train,sda-all,samples/GSE253474/GSM8021304,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021305,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,436,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021305,,,train,sda-all,samples/GSE253474/GSM8021305,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021306,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1321,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021306,,,train,sda-all,samples/GSE253474/GSM8021306,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021307,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1691,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021307,,,train,sda-all,samples/GSE253474/GSM8021307,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021308,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,83,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1137,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021308,,,train,sda-all,samples/GSE253474/GSM8021308,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021309,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,83,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1111,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021309,,,train,sda-all,samples/GSE253474/GSM8021309,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021310,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,786,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021310,,,train,sda-all,samples/GSE253474/GSM8021310,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021311,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,924,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021311,,,train,sda-all,samples/GSE253474/GSM8021311,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021312,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2534,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021312,,,train,sda-all,samples/GSE253474/GSM8021312,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021313,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1338,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021313,,,train,sda-all,samples/GSE253474/GSM8021313,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021314,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1346,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021314,,,train,sda-all,samples/GSE253474/GSM8021314,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021315,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1901,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021315,,,train,sda-all,samples/GSE253474/GSM8021315,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021316,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2152,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021316,,,train,sda-all,samples/GSE253474/GSM8021316,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021317,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1647,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021317,,,train,sda-all,samples/GSE253474/GSM8021317,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021318,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1619,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021318,,,train,sda-all,samples/GSE253474/GSM8021318,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021319,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2043,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021319,,,train,sda-all,samples/GSE253474/GSM8021319,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021320,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1882,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021320,,,train,sda-all,samples/GSE253474/GSM8021320,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021321,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1337,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021321,,,train,sda-all,samples/GSE253474/GSM8021321,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021322,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,972,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021322,,,train,sda-all,samples/GSE253474/GSM8021322,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021323,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1086,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021323,,,train,sda-all,samples/GSE253474/GSM8021323,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021324,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,720,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021324,,,train,sda-all,samples/GSE253474/GSM8021324,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021325,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1922,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021325,,,train,sda-all,samples/GSE253474/GSM8021325,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021326,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1815,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021326,,,train,sda-all,samples/GSE253474/GSM8021326,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021327,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,851,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021327,,,train,sda-all,samples/GSE253474/GSM8021327,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021328,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1313,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021328,,,train,sda-all,samples/GSE253474/GSM8021328,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021329,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,87,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1234,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021329,,,train,sda-all,samples/GSE253474/GSM8021329,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021330,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,446,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021330,,,train,sda-all,samples/GSE253474/GSM8021330,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021331,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,359,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021331,,,train,sda-all,samples/GSE253474/GSM8021331,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021332,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1476,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021332,,,train,sda-all,samples/GSE253474/GSM8021332,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021333,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1458,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021333,,,train,sda-all,samples/GSE253474/GSM8021333,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021334,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,83,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,987,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021334,,,train,sda-all,samples/GSE253474/GSM8021334,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021335,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,83,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1178,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021335,,,train,sda-all,samples/GSE253474/GSM8021335,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021336,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,adult,age rule: bare number read as years,adult,53,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,711,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021336,,,train,sda-all,samples/GSE253474/GSM8021336,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021337,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1074,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021337,,,train,sda-all,samples/GSE253474/GSM8021337,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021338,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2144,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021338,,,train,sda-all,samples/GSE253474/GSM8021338,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021339,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1279,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021339,,,train,sda-all,samples/GSE253474/GSM8021339,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021340,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,72,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1279,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021340,,,train,sda-all,samples/GSE253474/GSM8021340,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021341,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1692,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021341,,,train,sda-all,samples/GSE253474/GSM8021341,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021342,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,85,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2202,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021342,,,train,sda-all,samples/GSE253474/GSM8021342,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021343,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1775,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021343,,,train,sda-all,samples/GSE253474/GSM8021343,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021344,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1603,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021344,,,train,sda-all,samples/GSE253474/GSM8021344,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021345,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1947,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021345,,,train,sda-all,samples/GSE253474/GSM8021345,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021346,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2468,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021346,,,train,sda-all,samples/GSE253474/GSM8021346,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021347,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1353,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021347,,,train,sda-all,samples/GSE253474/GSM8021347,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021348,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,951,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021348,,,train,sda-all,samples/GSE253474/GSM8021348,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021349,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1076,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021349,,,train,sda-all,samples/GSE253474/GSM8021349,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021350,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,655,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021350,,,train,sda-all,samples/GSE253474/GSM8021350,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021351,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2052,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021351,,,train,sda-all,samples/GSE253474/GSM8021351,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021352,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1738,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021352,,,train,sda-all,samples/GSE253474/GSM8021352,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021353,GSE253474,GSE253474,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,rapid autopsy lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,,aged,age rule: bare number read as years,aged,86,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,632,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021353,,,train,sda-all,samples/GSE253474/GSM8021353,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8022509,GSE253520,GSE253520,Mouse uterine gene expressions during peri-implantation period,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,normal,luna,,"pregnancy day 4, wildtype",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,296,32285,counts,pixel,4.279684859558498,platform_constant,True,H&E,4.279684859558498,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39377223;41803091,,GSM8022509,,,train,hesrt,samples/GSE253520/GSM8022509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8022510,GSE253520,GSE253520,Mouse uterine gene expressions during peri-implantation period,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,normal,luna,,"pregnancy day 6, wildtype, implantation site",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,502,32285,counts,pixel,4.278925726244035,platform_constant,True,H&E,4.278925726244035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39377223;41803091,,GSM8022510,,,train,hesrt,samples/GSE253520/GSM8022510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM9191330,GSE253520,GSE253520,Mouse uterine gene expressions during peri-implantation period,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,normal,luna,,"pregnancy day 5, wildtype, implantation site",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,508,32285,counts,pixel,4.280444020926789,platform_constant,True,H&E,4.280444020926789,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39377223;41803091,,GSM9191330,,,train,hesrt,samples/GSE253520/GSM9191330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8023885,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Normal mammary tissues,primary tissue,,,normal,luna,,ddH2O (pH6),not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2591,25399,counts,pixel,17.531403817084144,platform_constant,True,H&E,17.531403817084144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023885,,,test,hesrt,samples/GSE253585/GSM8023885,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023886,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Normal mammary tissues,primary tissue,,,normal,luna,,ddH2O (pH6),not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2543,25399,counts,pixel,17.486965632673993,platform_constant,True,H&E,17.486965632673993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023886,,,test,hesrt,samples/GSE253585/GSM8023886,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8023887,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Normal mammary tissues,primary tissue,,,normal,luna,,ddH2O (pH6),not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4072,25399,counts,pixel,17.23358792798867,platform_constant,True,H&E,17.23358792798867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023887,,,test,hesrt,samples/GSE253585/GSM8023887,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023888,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Normal mammary tissues,primary tissue,,,normal,luna,,ddH2O (pH6),not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3628,25399,counts,pixel,17.10297591178625,platform_constant,True,H&E,17.10297591178625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023888,,,test,hesrt,samples/GSE253585/GSM8023888,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023889,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1506,25399,counts,pixel,17.397978581497835,platform_constant,True,H&E,17.397978581497835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023889,,,test,hesrt,samples/GSE253585/GSM8023889,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.88, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023890,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2389,25399,counts,pixel,16.522405330265407,platform_constant,True,H&E,16.522405330265407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023890,,,test,hesrt,samples/GSE253585/GSM8023890,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8023891,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004992;MONDO:0005626,cancer;epithelial neoplasm,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3213,25399,counts,pixel,17.39647351059275,platform_constant,True,H&E,17.39647351059275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023891,,,test,hesrt,samples/GSE253585/GSM8023891,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.59, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023892,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3840,25399,counts,pixel,18.247091382597024,platform_constant,True,H&E,18.247091382597024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023892,,,test,hesrt,samples/GSE253585/GSM8023892,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8023893,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3636,25399,counts,pixel,18.387631280584174,platform_constant,True,H&E,18.387631280584174,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023893,,,test,hesrt,samples/GSE253585/GSM8023893,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.67, ""uberon"": 0.89, ""life_stage"": 0.98}",,
GSM8023894,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0007254;MONDO:0005626,breast cancer;epithelial neoplasm,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3930,25399,counts,pixel,18.24726859531423,platform_constant,True,H&E,18.24726859531423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023894,,,test,hesrt,samples/GSE253585/GSM8023894,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.9, ""disease_status"": 0.55, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023895,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3150,25399,counts,pixel,17.233532137714068,platform_constant,True,H&E,17.233532137714068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023895,,,test,hesrt,samples/GSE253585/GSM8023895,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023896,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0001911,mammary gland,Microlesions,primary tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3928,25399,counts,pixel,17.102812319218103,platform_constant,True,H&E,17.102812319218103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023896,,,test,hesrt,samples/GSE253585/GSM8023896,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023897,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3716,25399,counts,pixel,18.367233727369587,platform_constant,True,H&E,18.367233727369587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023897,,,test,hesrt,samples/GSE253585/GSM8023897,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023898,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2397,25399,counts,pixel,18.367543502765205,platform_constant,True,H&E,18.367543502765205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023898,,,test,hesrt,samples/GSE253585/GSM8023898,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023899,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3799,25399,counts,pixel,18.367791334366903,platform_constant,True,H&E,18.367791334366903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023899,,,test,hesrt,samples/GSE253585/GSM8023899,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023900,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1185,25399,counts,pixel,18.32014490417995,platform_constant,True,H&E,18.32014490417995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023900,,,test,hesrt,samples/GSE253585/GSM8023900,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023901,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1648,25399,counts,pixel,17.69543101837034,platform_constant,True,H&E,17.69543101837034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023901,,,test,hesrt,samples/GSE253585/GSM8023901,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023902,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3304,25399,counts,pixel,17.740457560401865,platform_constant,True,H&E,17.740457560401865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023902,,,test,hesrt,samples/GSE253585/GSM8023902,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023903,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2912,25399,counts,pixel,17.87686385184453,platform_constant,True,H&E,17.87686385184453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023903,,,test,hesrt,samples/GSE253585/GSM8023903,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8023904,GSE253585,GSE253585,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,breast,luna,UBERON:0000310,breast,Breast tumor,tumour tissue,MONDO:0004989,breast carcinoma,disease,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2898,25399,counts,pixel,17.74022783909607,platform_constant,True,H&E,17.74022783909607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023904,,,test,hesrt,samples/GSE253585/GSM8023904,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8026844,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,PBS inoculated,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1575,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.1455665611658645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026844,,,train,sda-all,samples/GSE253710/GSM8026844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026845,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,PBS inoculated,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2119,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.1423441623188575,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026845,,,train,sda-all,samples/GSE253710/GSM8026845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026846,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,PBS inoculated,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2065,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.142496675681384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026846,,,train,sda-all,samples/GSE253710/GSM8026846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026847,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,PBS inoculated,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1571,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.130546288677304,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026847,,,train,sda-all,samples/GSE253710/GSM8026847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026848,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:7770010,disease of primarily extrinsic mechanism,disease,luna,,PBS inoculated,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2598,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.149124038634425,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026848,,,train,sda-all,samples/GSE253710/GSM8026848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026849,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:7770010,disease of primarily extrinsic mechanism,disease,luna,,PBS inoculated,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1549,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.131523721494264,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026849,,,train,sda-all,samples/GSE253710/GSM8026849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8026850,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,PBS inoculated,adult,age rule: age with unit,adult,13.5 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2087,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.147865075245636,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026850,,,train,sda-all,samples/GSE253710/GSM8026850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026851,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,PBS inoculated,adult,age rule: age with unit,adult,13.5 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1827,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.142808297149267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026851,,,train,sda-all,samples/GSE253710/GSM8026851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026852,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,PBS inoculated,adult,age rule: age with unit,adult,13.5 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2056,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.11699276064244,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026852,,,train,sda-all,samples/GSE253710/GSM8026852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026853,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005812,influenza,disease,luna,,Influenza virus inoculated,adult,age rule: age with unit,adult,13.5 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2074,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.088580673995816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026853,,,train,sda-all,samples/GSE253710/GSM8026853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026854,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005812,influenza,disease,luna,,Influenza virus inoculated,adult,age rule: age with unit,adult,13.5 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2494,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.223367596136971,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026854,,,train,sda-all,samples/GSE253710/GSM8026854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026855,GSE253710,GSE253710,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005812,influenza,disease,luna,,Influenza virus inoculated,adult,age rule: age with unit,adult,13.5 weeks,male,extracted field,M,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1948,36178,counts,um,1.0,verified,True,H&E-like (heuristic),4.143473316311079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026855,,,train,sda-all,samples/GSE253710/GSM8026855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8028753,GSE253850+GSE253852,GSE253850,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,52 years,male,extracted field,Male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1216,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.551885118633454,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028753,,,train,sda-all,samples/GSE253850/GSM8028753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8028754,GSE253850+GSE253852,GSE253850,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,61 years,female,extracted field,Female,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2609,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.550215855995936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028754,,,train,sda-all,samples/GSE253850/GSM8028754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8028755,GSE253850+GSE253852,GSE253850,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,21 years,male,extracted field,Male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1361,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.5542178605123915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028755,,,train,sda-all,samples/GSE253850/GSM8028755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8028756,GSE253850+GSE253852,GSE253850,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,19 years,female,extracted field,Female,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1798,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.553005110575694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028756,,,train,sda-all,samples/GSE253850/GSM8028756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8874474,GSE253852,GSE253852,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,8 weeks,male,extracted field,Male,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,276508,32285,counts,um,1.0,verified,True,H&E-like (heuristic),1.2008360163485663,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8874474,,,train,sda-all,samples/GSE253852/GSM8874474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8874475,GSE253852,GSE253852,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,8 weeks,female,extracted field,Female,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,254720,32285,counts,um,1.0,verified,True,H&E-like (heuristic),0.9325438014927191,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8874475,,,train,sda-all,samples/GSE253852/GSM8874475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8030977,GSE253951,GSE253951,Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain [Mouse Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,adult,luna,adult,0.19,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse Brain Gene Expression,xenium-1.6.0.8,cell,49625,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39453813,,GSM8030977,,,train,sda-all,samples/GSE253951/GSM8030977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8030978,GSE253951,GSE253951,Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain [Mouse Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,,adult,luna,adult,0.19,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse Brain Gene Expression,xenium-1.6.0.8,cell,32448,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000160462130937,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39453813,,GSM8030978,,,train,sda-all,samples/GSE253951/GSM8030978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM8032725,GSE254056,GSE254056,Injury-Induced CLU-Positive Cardiomyocytes Drive Metabolic Reprogramming of Macrophage Function in Heart Regeneration [stero-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,GFP overexpressed,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stero-seq,,,bin,38298,26463,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41205597,,GSM8032725,,,val,sda-all,samples/GSE254056/GSM8032725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8032726,GSE254056,GSE254056,Injury-Induced CLU-Positive Cardiomyocytes Drive Metabolic Reprogramming of Macrophage Function in Heart Regeneration [stero-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,Clu overexpressed,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stero-seq,,,bin,34279,26817,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41205597,,GSM8032726,,,val,sda-all,samples/GSE254056/GSM8032726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8033213,GSE254087,GSE254087,Postnatal Subventricular Zone Injury Predicts Motor Impairment in Preterm Infants Following Intestinal Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,118945,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059143600663,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8033213,,,train,sda-all,samples/GSE254087/GSM8033213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8033214,GSE254087,GSE254087,Postnatal Subventricular Zone Injury Predicts Motor Impairment in Preterm Infants Following Intestinal Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole brain,primary tissue,MONDO:0005020;MONDO:1010128,intestinal disorder;peritonitis,disease,luna,,peritonitis,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,95892,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999872652021649,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8033214,,,train,sda-all,samples/GSE254087/GSM8033214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8035258,GSE254164,GSE254164,Dynamic fibroblast-immune interactions shape recovery after brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000956,cerebral cortex,Brain,primary tissue,MONDO:0043510,brain injury,disease,mondo_predicate (Luna: perturbation),,Rest and PT injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2743,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.195919015253666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035258,,,train,sda-all,samples/GSE254164/GSM8035258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.63, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8035259,GSE254164,GSE254164,Dynamic fibroblast-immune interactions shape recovery after brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0043510,brain injury,disease,mondo_predicate (Luna: perturbation),,PT injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1925,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.19353584438107,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035259,,,train,sda-all,samples/GSE254164/GSM8035259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.29, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8035260,GSE254164,GSE254164,Dynamic fibroblast-immune interactions shape recovery after brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000956,cerebral cortex,Brain,primary tissue,MONDO:0043510,brain injury,disease,mondo_predicate (Luna: perturbation),,PT injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2170,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.338095616480534,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035260,,,train,sda-all,samples/GSE254164/GSM8035260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.46, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8035261,GSE254164,GSE254164,Dynamic fibroblast-immune interactions shape recovery after brain injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000956,cerebral cortex,Brain,primary tissue,MONDO:0043510,brain injury,disease,mondo_predicate (Luna: perturbation),,PT injury,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2502,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),5.479491704876656,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035261,,,train,sda-all,samples/GSE254164/GSM8035261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.51, ""life_stage"": 0.93}",disease_status;uberon,low_confidence_annotation
GSM8041061,GSE254364,GSE254364,High-resolution analysis of mononuclear phagocytes reveals clinically relevant markers in human colo-rectal liver metastasis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,CLM,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,colo-rectal liver metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4160,17943,counts,pixel,4.032308285759785,platform_constant,True,H&E,4.032308285759785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36652202,,GSM8041061,,,test,hesrt,samples/GSE254364/GSM8041061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8041062,GSE254364,GSE254364,High-resolution analysis of mononuclear phagocytes reveals clinically relevant markers in human colo-rectal liver metastasis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,CLM,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,colo-rectal liver metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3070,17943,counts,pixel,3.9976444703163354,platform_constant,True,H&E,3.9976444703163354,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36652202,,GSM8041062,,,test,hesrt,samples/GSE254364/GSM8041062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8047864,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2207,32285,counts,pixel,3.908928593318572,platform_constant,True,H&E,3.908928593318572,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047864,,,train,hesrt,samples/GSE254652/GSM8047864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047865,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,CTRL,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1948,32285,counts,pixel,4.067857261231787,platform_constant,True,H&E,4.067857261231787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047865,,,train,hesrt,samples/GSE254652/GSM8047865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047866,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1220,32285,counts,pixel,4.028571531702853,platform_constant,True,H&E,4.028571531702853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047866,,,train,hesrt,samples/GSE254652/GSM8047866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047867,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,T-bet KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2238,32285,counts,pixel,4.024999937934508,platform_constant,True,H&E,4.024999937934508,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047867,,,train,hesrt,samples/GSE254652/GSM8047867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047868,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,592,19465,counts,pixel,4.0918920251239,platform_constant,True,H&E,4.0918920251239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047868,,,train,hesrt,samples/GSE254652/GSM8047868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047869,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,637,19465,counts,pixel,4.064922666835724,platform_constant,True,H&E,4.064922666835724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047869,,,train,hesrt,samples/GSE254652/GSM8047869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047870,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,833,19465,counts,pixel,4.124324291329729,platform_constant,True,H&E,4.124324291329729,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047870,,,train,hesrt,samples/GSE254652/GSM8047870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047871,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3224,32285,counts,pixel,4.117857088913223,platform_constant,True,H&E,4.117857088913223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047871,,,train,hesrt,samples/GSE254652/GSM8047871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047872,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2048,32285,counts,pixel,4.09821426214956,platform_constant,True,H&E,4.09821426214956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047872,,,train,hesrt,samples/GSE254652/GSM8047872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047873,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1877,32285,counts,pixel,4.012499803588139,platform_constant,True,H&E,4.012499803588139,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047873,,,train,hesrt,samples/GSE254652/GSM8047873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047874,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2222,32285,counts,pixel,3.9393937818182017,platform_constant,True,H&E,3.9393937818182017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047874,,,train,hesrt,samples/GSE254652/GSM8047874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047875,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,CTRL,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2213,32285,counts,pixel,3.9696968585454555,platform_constant,True,H&E,3.9696968585454555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047875,,,train,hesrt,samples/GSE254652/GSM8047875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8047876,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,CTRL,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2708,32285,counts,pixel,4.04107151765685,platform_constant,True,H&E,4.04107151765685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047876,,,train,hesrt,samples/GSE254652/GSM8047876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047877,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,T-bet KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2244,32285,counts,pixel,4.073214366363932,platform_constant,True,H&E,4.073214366363932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047877,,,train,hesrt,samples/GSE254652/GSM8047877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047878,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,T-bet KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2528,32285,counts,pixel,3.9696968585454555,platform_constant,True,H&E,3.9696968585454555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047878,,,train,hesrt,samples/GSE254652/GSM8047878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047879,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2034,19465,counts,pixel,4.122604529784976,platform_constant,True,H&E,4.122604529784976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047879,,,train,hesrt,samples/GSE254652/GSM8047879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047880,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1910,19465,counts,pixel,4.006060352076387,platform_constant,True,H&E,4.006060352076387,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047880,,,train,hesrt,samples/GSE254652/GSM8047880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047881,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1922,19465,counts,pixel,4.078350296864351,platform_constant,True,H&E,4.078350296864351,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047881,,,train,hesrt,samples/GSE254652/GSM8047881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047882,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1640,19465,counts,pixel,4.0453611098593205,platform_constant,True,H&E,4.0453611098593205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047882,,,train,hesrt,samples/GSE254652/GSM8047882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047883,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2553,19465,counts,pixel,3.1422571805497697,platform_constant,True,H&E,3.1422571805497697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047883,,,train,hesrt,samples/GSE254652/GSM8047883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047884,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2498,19465,counts,pixel,3.7326161140602196,platform_constant,True,H&E,3.7326161140602196,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047884,,,train,hesrt,samples/GSE254652/GSM8047884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047885,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2002,19465,counts,pixel,4.3574468977511565,platform_constant,True,H&E,4.3574468977511565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047885,,,train,hesrt,samples/GSE254652/GSM8047885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047886,GSE254652,GSE254652,Comparing 10x Visium spatial transcriptomic technologies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,MONDO:0005136,malaria,disease,luna,malaria infection,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1711,19465,counts,pixel,3.2250969397902605,platform_constant,True,H&E,3.2250969397902605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047886,,,train,hesrt,samples/GSE254652/GSM8047886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8058242,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2291,17943,counts,pixel,7.045871740007336,platform_constant,True,H&E,7.045871740007336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058242,,,train,hesrt,samples/GSE254829/GSM8058242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058243,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,high grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2172,17943,counts,pixel,7.04587174000728,platform_constant,True,H&E,7.04587174000728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058243,,,train,hesrt,samples/GSE254829/GSM8058243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058244,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2118,17943,counts,pixel,7.019042580984585,platform_constant,True,H&E,7.019042580984585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058244,,,train,hesrt,samples/GSE254829/GSM8058244,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058245,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,high grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2635,17943,counts,pixel,7.111111293155474,platform_constant,True,H&E,7.111111293155474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058245,,,train,hesrt,samples/GSE254829/GSM8058245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8058246,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2682,17943,counts,pixel,7.0844369538887015,platform_constant,True,H&E,7.0844369538887015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058246,,,train,hesrt,samples/GSE254829/GSM8058246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8058248,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,high grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2392,17943,counts,pixel,7.019042580984585,platform_constant,True,H&E,7.019042580984585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058248,,,train,hesrt,samples/GSE254829/GSM8058248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058249,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2119,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058249,,,train,hesrt,samples/GSE254829/GSM8058249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058250,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2689,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058250,,,train,hesrt,samples/GSE254829/GSM8058250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8058251,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2864,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058251,,,train,hesrt,samples/GSE254829/GSM8058251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058252,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2238,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058252,,,train,hesrt,samples/GSE254829/GSM8058252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8058253,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1484,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058253,,,train,hesrt,samples/GSE254829/GSM8058253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058254,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,low grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1893,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058254,,,train,hesrt,samples/GSE254829/GSM8058254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058255,GSE254829,GSE254829,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0002356;MONDO:0024474,pancreas disorder;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,high grade,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2573,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058255,,,train,hesrt,samples/GSE254829/GSM8058255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8059173,GSE254861,GSE254861,Spatial transcriptomics reveals C10 tumor transcriptomic changes generated by Smarta cell transfer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,PBS and Smarta,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7088,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.979048860590122,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42313973,,GSM8059173,,,train,sda-all,samples/GSE254861/GSM8059173,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8059174,GSE254861,GSE254861,Spatial transcriptomics reveals C10 tumor transcriptomic changes generated by Smarta cell transfer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,PBS and Smarta,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3480,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.480920773871659,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42313973,,GSM8059174,,,train,sda-all,samples/GSE254861/GSM8059174,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8066699,GSE255217,GSE255217,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Trephine BM Biopsy,tumour tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,829,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.9176169102112492,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066699,,,train,sda-all,samples/GSE255217/GSM8066699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.48, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8066700,GSE255217,GSE255217,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Trephine BM Biopsy,tumour tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,646,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.960321809451011,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066700,,,train,sda-all,samples/GSE255217/GSM8066700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8066701,GSE255217,GSE255217,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Trephine BM Biopsy,primary tissue,,,normal,luna,Healthy,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1305,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.975144876190975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066701,,,train,sda-all,samples/GSE255217/GSM8066701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8066702,GSE255217,GSE255217,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Trephine BM Biopsy,primary tissue,,,normal,luna,Healthy,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1454,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.977192174125382,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066702,,,train,sda-all,samples/GSE255217/GSM8066702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8070697,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:53,53,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1811,32285,counts,pixel,4.671428534057133,platform_constant,True,H&E,4.671428534057133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070697,,,train,hesrt,samples/GSE255370/GSM8070697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070698,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:53,53,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1763,32285,counts,pixel,4.487499887767627,platform_constant,True,H&E,4.487499887767627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070698,,,train,hesrt,samples/GSE255370/GSM8070698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8070699,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:53,53,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1938,32285,counts,pixel,4.530357007172927,platform_constant,True,H&E,4.530357007172927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070699,,,train,hesrt,samples/GSE255370/GSM8070699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070700,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:53,53,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2037,32285,counts,pixel,4.116325094516879,platform_constant,True,H&E,4.116325094516879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070700,,,train,hesrt,samples/GSE255370/GSM8070700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070701,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:13,13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2021,32285,counts,pixel,4.608928524740106,platform_constant,True,H&E,4.608928524740106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070701,,,train,hesrt,samples/GSE255370/GSM8070701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070702,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:13,13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2034,32285,counts,pixel,4.364285743962857,platform_constant,True,H&E,4.364285743962857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070702,,,train,hesrt,samples/GSE255370/GSM8070702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070703,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:13,13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1864,32285,counts,pixel,4.353571294350809,platform_constant,True,H&E,4.353571294350809,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070703,,,train,hesrt,samples/GSE255370/GSM8070703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070704,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:14,14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2222,32285,counts,pixel,4.116483245142776,platform_constant,True,H&E,4.116483245142776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070704,,,train,hesrt,samples/GSE255370/GSM8070704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070705,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:14,14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2102,32285,counts,pixel,4.317857244067707,platform_constant,True,H&E,4.317857244067707,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070705,,,train,hesrt,samples/GSE255370/GSM8070705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070706,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:14,14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2312,32285,counts,pixel,4.065878028226892,platform_constant,True,H&E,4.065878028226892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070706,,,train,hesrt,samples/GSE255370/GSM8070706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070707,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:45,45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2515,32285,counts,pixel,4.407142865163853,platform_constant,True,H&E,4.407142865163853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070707,,,train,hesrt,samples/GSE255370/GSM8070707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070708,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:45,45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2269,32285,counts,pixel,4.6625002564375135,platform_constant,True,H&E,4.6625002564375135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070708,,,train,hesrt,samples/GSE255370/GSM8070708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070709,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:45,45,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2409,32285,counts,pixel,4.512500085511859,platform_constant,True,H&E,4.512500085511859,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070709,,,train,hesrt,samples/GSE255370/GSM8070709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8070710,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:43,43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1574,32285,counts,pixel,4.074603328774912,platform_constant,True,H&E,4.074603328774912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070710,,,train,hesrt,samples/GSE255370/GSM8070710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070711,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:43,43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1720,32285,counts,pixel,4.487499887767627,platform_constant,True,H&E,4.487499887767627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070711,,,train,hesrt,samples/GSE255370/GSM8070711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070712,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:43,43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1670,32285,counts,pixel,4.255891530784454,platform_constant,True,H&E,4.255891530784454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070712,,,train,hesrt,samples/GSE255370/GSM8070712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8070713,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:46,46,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1887,32285,counts,pixel,4.221428514861422,platform_constant,True,H&E,4.221428514861422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070713,,,train,hesrt,samples/GSE255370/GSM8070713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070714,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:46,46,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1976,32285,counts,pixel,4.144403542087903,platform_constant,True,H&E,4.144403542087903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070714,,,train,hesrt,samples/GSE255370/GSM8070714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070715,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Cuprizone,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:46,46,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1813,32285,counts,pixel,4.236584587091667,platform_constant,True,H&E,4.236584587091667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070715,,,train,hesrt,samples/GSE255370/GSM8070715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070716,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:39,39,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2145,32285,counts,pixel,4.275000143554501,platform_constant,True,H&E,4.275000143554501,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070716,,,train,hesrt,samples/GSE255370/GSM8070716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070717,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:39,39,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2329,32285,counts,pixel,4.442857258371432,platform_constant,True,H&E,4.442857258371432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070717,,,train,hesrt,samples/GSE255370/GSM8070717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070718,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:39,39,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2314,32285,counts,pixel,4.418370551369466,platform_constant,True,H&E,4.418370551369466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070718,,,train,hesrt,samples/GSE255370/GSM8070718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070719,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:40,40,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1881,32285,counts,pixel,4.319642746883963,platform_constant,True,H&E,4.319642746883963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070719,,,train,hesrt,samples/GSE255370/GSM8070719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070720,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:40,40,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1916,32285,counts,pixel,4.319642746883942,platform_constant,True,H&E,4.319642746883942,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070720,,,train,hesrt,samples/GSE255370/GSM8070720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070721,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:40,40,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1617,32285,counts,pixel,4.407142865163864,platform_constant,True,H&E,4.407142865163864,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070721,,,train,hesrt,samples/GSE255370/GSM8070721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8070722,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:41,41,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2436,32285,counts,pixel,4.2558915307844565,platform_constant,True,H&E,4.2558915307844565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070722,,,train,hesrt,samples/GSE255370/GSM8070722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8070723,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:41,41,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2368,32285,counts,pixel,4.142857217428553,platform_constant,True,H&E,4.142857217428553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070723,,,train,hesrt,samples/GSE255370/GSM8070723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8070724,GSE255370,GSE255370,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,Recovery,adult,age rule: age with unit,not stated,6–8 weeks,male,extracted field,male,GSE255370:41,41,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2274,32285,counts,pixel,4.334736426463975,platform_constant,True,H&E,4.334736426463975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070724,,,train,hesrt,samples/GSE255370/GSM8070724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8072115,GSE255407,GSE255407,Single cell approaches define two mammalian oligodendrocyte precursor cell populations and their evolution over developmental time [Xenium In Situ Gene Expression],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000956,cerebral cortex,Postnatal mouse brain cortex,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,130242,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020664572656,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38579710,,GSM8072115,,,train,sda-all,samples/GSE255407/GSM8072115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8072116,GSE255407,GSE255407,Single cell approaches define two mammalian oligodendrocyte precursor cell populations and their evolution over developmental time [Xenium In Situ Gene Expression],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000956,cerebral cortex,Postnatal mouse brain cortex,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,124039,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38579710,,GSM8072116,,,train,sda-all,samples/GSE255407/GSM8072116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8072117,GSE255407,GSE255407,Single cell approaches define two mammalian oligodendrocyte precursor cell populations and their evolution over developmental time [Xenium In Situ Gene Expression],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000956,cerebral cortex,Postnatal mouse brain cortex,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,126119,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048249241797,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38579710,,GSM8072117,,,train,sda-all,samples/GSE255407/GSM8072117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8074615,GSE255552,GSE255552,Spatial transcriptomic analysis of liver-innervating cholinergic neurons,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,"ChAT-IRES-cre+GFP, HFD (control)",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2432,32285,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39436946,,GSM8074615,,,train,hesrt,samples/GSE255552/GSM8074615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8074616,GSE255552,GSE255552,Spatial transcriptomic analysis of liver-innervating cholinergic neurons,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,"ChAT-IRES-cre+dTA, HFD (ablation)",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,834,32285,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39436946,,GSM8074616,,,train,hesrt,samples/GSE255552/GSM8074616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8082300,GSE255892,GSE255892,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole brain,primary tissue,MONDO:0043510,brain injury,disease,luna,,perinatal hyopxia,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,924093,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082300,,,train,sda-all,samples/GSE255892/GSM8082300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8082301,GSE255892,GSE255892,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole brain,primary tissue,MONDO:0043510,brain injury,disease,mondo_predicate (Luna: perturbation),,perinatal hyopxia,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1550129,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082301,,,train,sda-all,samples/GSE255892/GSM8082301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8082302,GSE255892,GSE255892,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole brain,primary tissue,,,normal,luna,,perinatal normoxia,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,2177495,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082302,,,train,sda-all,samples/GSE255892/GSM8082302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8082303,GSE255892,GSE255892,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole brain,primary tissue,,,normal,luna,,perinatal normoxia,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,629688,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082303,,,train,sda-all,samples/GSE255892/GSM8082303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8082304,GSE255892,GSE255892,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole brain,primary tissue,,,normal,luna,,perinatal normoxia,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1422754,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082304,,,train,sda-all,samples/GSE255892/GSM8082304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8458769,GSE255942,GSE255942,The HIF-1α/PLOD2 axis integrates extracellular matrix organization and cell metabolism leading to aberrant musculoskeletal repair.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0000043,tendon,Tendon,primary tissue,MONDO:0043519,burn,disease,mondo_predicate (Luna: perturbation),,burn/tenotomy procedure,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3555,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.793691509347637,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38472175,,GSM8458769,,,train,sda-all,samples/GSE255942/GSM8458769,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8458770,GSE255942,GSE255942,The HIF-1α/PLOD2 axis integrates extracellular matrix organization and cell metabolism leading to aberrant musculoskeletal repair.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0000043,tendon,Tendon,primary tissue,MONDO:0043519,burn,disease,mondo_predicate (Luna: perturbation),,burn/tenotomy procedure,adult,age rule: age with unit,adult,10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3195,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.477394878902958,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38472175,,GSM8458770,,,train,sda-all,samples/GSE255942/GSM8458770,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8083339,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,53315,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38427564,,GSM8083339,,,train,sda-all,samples/GSE255953/GSM8083339,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8083340,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,56458,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38427564,,GSM8083340,,,train,sda-all,samples/GSE255953/GSM8083340,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8083341,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,52467,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38427564,,GSM8083341,,,train,sda-all,samples/GSE255953/GSM8083341,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8083342,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,55381,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083342,,,train,sda-all,samples/GSE255953/GSM8083342,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8083343,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,55610,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083343,,,train,sda-all,samples/GSE255953/GSM8083343,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8083344,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,60723,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083344,,,train,sda-all,samples/GSE255953/GSM8083344,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 0.98}",,
GSM8083345,GSE255953,GSE255953,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,50175,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083345,,,train,sda-all,samples/GSE255953/GSM8083345,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8091664,GSE256234,GSE256234,Longitudinal spatial transcriptomics of murine IL10KO colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4695,32285,counts,um,1.0,verified,True,H&E,4.394810740381603,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091664,,,train,sda-all,samples/GSE256234/GSM8091664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8091665,GSE256234,GSE256234,Longitudinal spatial transcriptomics of murine IL10KO colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,Il10KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3860,32285,counts,um,1.0,verified,True,H&E,4.516618161857579,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091665,,,train,sda-all,samples/GSE256234/GSM8091665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8091666,GSE256234,GSE256234,Longitudinal spatial transcriptomics of murine IL10KO colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005292,colitis,disease,luna,,Il10KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,32285,counts,um,1.0,verified,True,H&E,4.51564072073888,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091666,,,train,sda-all,samples/GSE256234/GSM8091666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8091667,GSE256234,GSE256234,Longitudinal spatial transcriptomics of murine IL10KO colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0004754;MONDO:0005292,rectal prolapse;colitis,disease,luna,,Il10KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,32285,counts,um,1.0,verified,True,H&E,4.770990611327005,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091667,,,train,sda-all,samples/GSE256234/GSM8091667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8093729,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,19327591,25727,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8093729,,,test,sda-all,samples/GSE256318/GSM8093729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8093730,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,10965430,22377,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8093730,,,test,sda-all,samples/GSE256318/GSM8093730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8093731,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,10336509,22138,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8093731,,,test,sda-all,samples/GSE256318/GSM8093731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8093732,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,11960717,24963,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8093732,,,test,sda-all,samples/GSE256318/GSM8093732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8093733,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,12802658,22263,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8093733,,,test,sda-all,samples/GSE256318/GSM8093733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8372199,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,12954685,23515,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8372199,,,test,sda-all,samples/GSE256318/GSM8372199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8372200,GSE256318,GSE256318,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,GEO series text (assay_final.csv),Nova-ST,sequencing-based,Nova-ST,,,bin,9923921,22061,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39111312,,GSM8372200,,,test,sda-all,samples/GSE256318/GSM8372200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8093734,GSE256319,GSE256319,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Stereo-Seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,161510,25712,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,39111312,,GSM8093734,,,val,sda-all,samples/GSE256319/GSM8093734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8097055,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,"sham, rostral 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1455,32285,counts,pixel,3.9375791862171408,platform_constant,True,H&E,3.9375791862171408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097055,,,train,hesrt,samples/GSE256397/GSM8097055,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097056,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,"sham, rostral 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1417,32285,counts,pixel,4.018055469770078,platform_constant,True,H&E,4.018055469770078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097056,,,train,hesrt,samples/GSE256397/GSM8097056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097057,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,"sham, caudal 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1273,32285,counts,pixel,4.02824256435091,platform_constant,True,H&E,4.02824256435091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097057,,,train,hesrt,samples/GSE256397/GSM8097057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097058,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,,,normal,luna,,"sham, caudal 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1440,32285,counts,pixel,3.983608335793203,platform_constant,True,H&E,3.983608335793203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097058,,,train,hesrt,samples/GSE256397/GSM8097058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097059,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,"3h post-transection, rostral 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1474,32285,counts,pixel,3.947342988432303,platform_constant,True,H&E,3.947342988432303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097059,,,train,hesrt,samples/GSE256397/GSM8097059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097060,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"3h post-transection, rostral 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1691,32285,counts,pixel,3.96666656496135,platform_constant,True,H&E,3.96666656496135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097060,,,train,hesrt,samples/GSE256397/GSM8097060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8097061,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,"3h post-transection, caudal 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1558,32285,counts,pixel,3.9527778828821396,platform_constant,True,H&E,3.9527778828821396,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097061,,,train,hesrt,samples/GSE256397/GSM8097061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097062,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,"3h post-transection, caudal 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1488,32285,counts,pixel,3.9989513134512764,platform_constant,True,H&E,3.9989513134512764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097062,,,train,hesrt,samples/GSE256397/GSM8097062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097063,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"24h post-transection, rostral 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1433,32285,counts,pixel,3.9529223900005603,platform_constant,True,H&E,3.9529223900005603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097063,,,train,hesrt,samples/GSE256397/GSM8097063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097064,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"24h post-transection, rostral 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1401,32285,counts,pixel,3.948611319202931,platform_constant,True,H&E,3.948611319202931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097064,,,train,hesrt,samples/GSE256397/GSM8097064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8097065,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"24h post-transection, caudal 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1500,32285,counts,pixel,3.9626861400242723,platform_constant,True,H&E,3.9626861400242723,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097065,,,train,hesrt,samples/GSE256397/GSM8097065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8097066,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"24h post-transection, caudal 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1610,32285,counts,pixel,3.9529223900005603,platform_constant,True,H&E,3.9529223900005603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097066,,,train,hesrt,samples/GSE256397/GSM8097066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097067,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"72h post-transection, rostral 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1264,32285,counts,pixel,3.940369000453341,platform_constant,True,H&E,3.940369000453341,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097067,,,train,hesrt,samples/GSE256397/GSM8097067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8097068,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,"72h post-transection, rostral 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1080,32285,counts,pixel,3.957106722033494,platform_constant,True,H&E,3.957106722033494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097068,,,train,hesrt,samples/GSE256397/GSM8097068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097069,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"72h post-transection, caudal 0.5mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1304,32285,counts,pixel,13.194444180555585,platform_constant,True,H&E,13.194444180555585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097069,,,train,hesrt,samples/GSE256397/GSM8097069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097070,GSE256397,GSE256397,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,"72h post-transection, caudal 1mm",adult,age rule: age with unit,not stated,8–9 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1400,32285,counts,pixel,3.9529223900005603,platform_constant,True,H&E,3.9529223900005603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097070,,,train,hesrt,samples/GSE256397/GSM8097070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115762,GSE256505,GSE256505,Sex differences in Non-Alcoholic Steatohepatitis (NASH) in mice evoked by a fructose-palmitate-cholesterol (FPC)-enriched diet,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,NASH,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1290,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39911943,,GSM8115762,,,train,sda-all,samples/GSE256505/GSM8115762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115763,GSE256505,GSE256505,Sex differences in Non-Alcoholic Steatohepatitis (NASH) in mice evoked by a fructose-palmitate-cholesterol (FPC)-enriched diet,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,NASH,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1613,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39911943,,GSM8115763,,,train,sda-all,samples/GSE256505/GSM8115763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8110784,GSE258959,GSE258959,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,hyperuricemia,Uox_KO,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2650,32285,counts,pixel,5.494422557947547,platform_constant,True,H&E,5.494422557947547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110784,,,train,hesrt,samples/GSE258959/GSM8110784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8110785,GSE258959,GSE258959,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,hyperuricemia,Uox_KO,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2590,32285,counts,pixel,5.128137697515024,platform_constant,True,H&E,5.128137697515024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110785,,,train,hesrt,samples/GSE258959/GSM8110785,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8110786,GSE258959,GSE258959,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2528,32285,counts,pixel,5.2909312324094655,platform_constant,True,H&E,5.2909312324094655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110786,,,train,hesrt,samples/GSE258959/GSM8110786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8110787,GSE258959,GSE258959,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3362,32285,counts,pixel,5.029445585230719,platform_constant,True,H&E,5.029445585230719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110787,,,train,hesrt,samples/GSE258959/GSM8110787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8114827,GSE259363,GSE259363,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,olive oil treatment; genotype HK2fl/fl; healthy control,adult,age rule: age with unit,adult,5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3064,19465,counts,pixel,4.457520343298791,platform_constant,True,H&E,4.457520343298791,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114827,,,train,hesrt,samples/GSE259363/GSM8114827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8114828,GSE259363,GSE259363,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,CCl4 treatment; genotype HK2fl/fl; fibrotic,adult,age rule: age with unit,adult,5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4134,19465,counts,pixel,4.211798810071486,platform_constant,True,H&E,4.211798810071486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114828,,,train,hesrt,samples/GSE259363/GSM8114828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8114829,GSE259363,GSE259363,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,CCl4 treatment; genotype PDGFRBcreERT2/Hk2fl/fl; HSC-specific HK2 deletion with CCl4,adult,age rule: age with unit,adult,5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3865,19465,counts,pixel,4.503693346854832,platform_constant,True,H&E,4.503693346854832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114829,,,train,hesrt,samples/GSE259363/GSM8114829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8114830,GSE259363,GSE259363,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,CCl4 treatment; genotype HK2fl/fl; fibrotic,adult,age rule: age with unit,adult,5 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2577,19465,counts,pixel,4.227055943155614,platform_constant,True,H&E,4.227055943155614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114830,,,train,hesrt,samples/GSE259363/GSM8114830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115651,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2153,32285,counts,pixel,4.150829984868192,platform_constant,True,H&E,4.150829984868192,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115651,,,train,hesrt,samples/GSE259405/GSM8115651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8115652,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2068,32285,counts,pixel,4.139420464867858,platform_constant,True,H&E,4.139420464867858,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115652,,,train,hesrt,samples/GSE259405/GSM8115652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115653,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2053,32285,counts,pixel,4.612678580134204,platform_constant,True,H&E,4.612678580134204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115653,,,train,hesrt,samples/GSE259405/GSM8115653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8115654,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2413,32285,counts,pixel,4.613283942366312,platform_constant,True,H&E,4.613283942366312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115654,,,train,hesrt,samples/GSE259405/GSM8115654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8115655,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2104,32285,counts,pixel,4.05899416943699,platform_constant,True,H&E,4.05899416943699,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115655,,,train,hesrt,samples/GSE259405/GSM8115655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115656,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2266,32285,counts,pixel,4.154273993134488,platform_constant,True,H&E,4.154273993134488,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115656,,,train,hesrt,samples/GSE259405/GSM8115656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115657,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2297,32285,counts,pixel,4.623004676845766,platform_constant,True,H&E,4.623004676845766,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115657,,,train,hesrt,samples/GSE259405/GSM8115657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115658,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2159,32285,counts,pixel,4.613283942366312,platform_constant,True,H&E,4.613283942366312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115658,,,train,hesrt,samples/GSE259405/GSM8115658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115659,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2166,32285,counts,pixel,4.617994768370472,platform_constant,True,H&E,4.617994768370472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115659,,,train,hesrt,samples/GSE259405/GSM8115659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8115660,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2478,32285,counts,pixel,4.618719460521873,platform_constant,True,H&E,4.618719460521873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115660,,,train,hesrt,samples/GSE259405/GSM8115660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115661,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2648,32285,counts,pixel,4.619081891897559,platform_constant,True,H&E,4.619081891897559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115661,,,train,hesrt,samples/GSE259405/GSM8115661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115662,GSE259405,GSE259405,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2733,32285,counts,pixel,4.618719460521873,platform_constant,True,H&E,4.618719460521873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115662,,,train,hesrt,samples/GSE259405/GSM8115662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054415,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,4,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,71227,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999810996563574,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054415,,,val,sda-all,samples/GSE260452/GSM9054415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054416,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,223613,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998392725936813,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054416,,,val,sda-all,samples/GSE260452/GSM9054416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054417,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,136005,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000167785234899,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054417,,,val,sda-all,samples/GSE260452/GSM9054417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054418,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,150258,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998709477596526,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054418,,,val,sda-all,samples/GSE260452/GSM9054418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054419,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,84565,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000245249896736,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054419,,,val,sda-all,samples/GSE260452/GSM9054419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9054420,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66638,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997938994229185,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054420,,,val,sda-all,samples/GSE260452/GSM9054420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM9054421,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,105149,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999044159816475,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054421,,,val,sda-all,samples/GSE260452/GSM9054421,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054422,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,122683,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000039826674313,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054422,,,val,sda-all,samples/GSE260452/GSM9054422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054423,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,144901,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500000739863865,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054423,,,val,sda-all,samples/GSE260452/GSM9054423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9054424,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,13,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,401858,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000058284115636,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054424,,,val,sda-all,samples/GSE260452/GSM9054424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054425,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,103335,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103334251861,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054425,,,val,sda-all,samples/GSE260452/GSM9054425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054426,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,97780,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000245249896736,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054426,,,val,sda-all,samples/GSE260452/GSM9054426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054428,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,180332,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997641509433954,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054428,,,val,sda-all,samples/GSE260452/GSM9054428,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9054429,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,160499,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500017686593562,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054429,,,val,sda-all,samples/GSE260452/GSM9054429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054430,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,160738,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000265330188679,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054430,,,val,sda-all,samples/GSE260452/GSM9054430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9054431,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,147881,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000029491565412,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054431,,,val,sda-all,samples/GSE260452/GSM9054431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054432,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,147265,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999140775364304,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054432,,,val,sda-all,samples/GSE260452/GSM9054432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054433,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,93702,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000186196623635,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054433,,,val,sda-all,samples/GSE260452/GSM9054433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9054434,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,<1,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,104023,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999830788899752,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054434,,,val,sda-all,samples/GSE260452/GSM9054434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054435,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,7,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,132602,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137892995036,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054435,,,val,sda-all,samples/GSE260452/GSM9054435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054436,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,2,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61129,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206213912566,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054436,,,val,sda-all,samples/GSE260452/GSM9054436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9054437,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,2,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56479,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999140775364304,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054437,,,val,sda-all,samples/GSE260452/GSM9054437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM9054438,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,adult,age rule: bare number read as years,adult,19,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,166042,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999793268833204,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054438,,,val,sda-all,samples/GSE260452/GSM9054438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054439,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,adult,age rule: bare number read as years,adult,19,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,164677,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998553121124434,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054439,,,val,sda-all,samples/GSE260452/GSM9054439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054440,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37655,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000513347022587,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054440,,,val,sda-all,samples/GSE260452/GSM9054440,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.72}",,
GSM9054441,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37144,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000082318077049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054441,,,val,sda-all,samples/GSE260452/GSM9054441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.74}",,
GSM9054442,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,neonatal or infant,luna,neonatal or infant,,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41761,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999230137548756,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054442,,,val,sda-all,samples/GSE260452/GSM9054442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM9054443,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51207,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999609053497942,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054443,,,val,sda-all,samples/GSE260452/GSM9054443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054444,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,10,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,105323,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000229610580456,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054444,,,val,sda-all,samples/GSE260452/GSM9054444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054445,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57730,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017186855493,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054445,,,val,sda-all,samples/GSE260452/GSM9054445,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054446,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67235,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999837892006602,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054446,,,val,sda-all,samples/GSE260452/GSM9054446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM9054447,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,17,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83329,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054447,,,val,sda-all,samples/GSE260452/GSM9054447,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.98}",,
GSM9054448,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52068,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017186855493,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054448,,,val,sda-all,samples/GSE260452/GSM9054448,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054449,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,10,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,109123,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000150409866887,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054449,,,val,sda-all,samples/GSE260452/GSM9054449,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054450,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60116,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000309363398872,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054450,,,val,sda-all,samples/GSE260452/GSM9054450,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054451,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54367,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000082318077049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054451,,,val,sda-all,samples/GSE260452/GSM9054451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054452,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,17,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67934,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137570504883,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054452,,,val,sda-all,samples/GSE260452/GSM9054452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054453,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,3,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54212,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999263058601584,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054453,,,val,sda-all,samples/GSE260452/GSM9054453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054454,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,17,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67897,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054454,,,val,sda-all,samples/GSE260452/GSM9054454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054455,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,17,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75274,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999140775364304,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054455,,,val,sda-all,samples/GSE260452/GSM9054455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054456,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,10,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,104122,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054456,,,val,sda-all,samples/GSE260452/GSM9054456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054457,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,5,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,107594,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000183772856749,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054457,,,val,sda-all,samples/GSE260452/GSM9054457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054458,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,9,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67027,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214877,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054458,,,val,sda-all,samples/GSE260452/GSM9054458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054459,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,11,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,324636,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054459,,,val,sda-all,samples/GSE260452/GSM9054459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9054460,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,5,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,80938,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017186855493,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054460,,,val,sda-all,samples/GSE260452/GSM9054460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054461,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,11,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,40976,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999609053497942,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054461,,,val,sda-all,samples/GSE260452/GSM9054461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054462,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,9,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,73817,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979353773098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054462,,,val,sda-all,samples/GSE260452/GSM9054462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054463,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,11,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,343803,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000067063356581,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054463,,,val,sda-all,samples/GSE260452/GSM9054463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054464,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,11,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37767,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054464,,,val,sda-all,samples/GSE260452/GSM9054464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054465,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77223,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000029491565412,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054465,,,val,sda-all,samples/GSE260452/GSM9054465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054466,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61946,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206213912566,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054466,,,val,sda-all,samples/GSE260452/GSM9054466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054467,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43147,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999512119967132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054467,,,val,sda-all,samples/GSE260452/GSM9054467,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054468,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68740,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054468,,,val,sda-all,samples/GSE260452/GSM9054468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054469,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45275,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999512119967132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054469,,,val,sda-all,samples/GSE260452/GSM9054469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054470,GSE260452+GSE300146,GSE260452,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0850340;MONDO:0016698,supratentorial ependymoma;ependymoma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,6,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64052,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999867272298254,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054470,,,val,sda-all,samples/GSE260452/GSM9054470,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8124394,GSE260779,GSE260779,Spatial transcriptomic sequencing of repaired lung transplanted with human P63+ progenitor [STOmics-seq],Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,75179,78647,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,39900892,,GSM8124394,,,test,sda-all,samples/GSE260779/GSM8124394,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8124718,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,Colorectal pre-malignant lesion,primary tissue,MONDO:0005575,colorectal cancer,disease,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,35123,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124718,,,test,sda-all,samples/GSE260801/GSM8124718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8124719,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,Colorectal pre-malignant lesion,primary tissue,MONDO:0005575,colorectal cancer,disease,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,35277,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124719,,,test,sda-all,samples/GSE260801/GSM8124719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8124720,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,Colorectal pre-malignant lesion,primary tissue,MONDO:0005575,colorectal cancer,disease,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,26564,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124720,,,test,sda-all,samples/GSE260801/GSM8124720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.68, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8124721,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,Colorectal pre-malignant lesion,primary tissue,MONDO:0005575,colorectal cancer,disease,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,35311,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124721,,,test,sda-all,samples/GSE260801/GSM8124721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8124722,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,34781,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124722,,,test,sda-all,samples/GSE260801/GSM8124722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8124723,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,33673,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124723,,,test,sda-all,samples/GSE260801/GSM8124723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8124724,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,43109,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124724,,,test,sda-all,samples/GSE260801/GSM8124724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8124725,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,42394,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124725,,,test,sda-all,samples/GSE260801/GSM8124725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8124726,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,Colorectal pre-malignant lesion,primary tissue,MONDO:0005575,colorectal cancer,disease,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,51162,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124726,,,test,sda-all,samples/GSE260801/GSM8124726,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8124727,GSE260797+GSE260801,GSE260801,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,Colorectal pre-malignant lesion,primary tissue,MONDO:0005575,colorectal cancer,disease,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,48034,17160,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124727,,,test,sda-all,samples/GSE260801/GSM8124727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8125592,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1792,25340,counts,pixel,4.167749934337109,platform_constant,True,H&E,4.167749934337109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125592,,,train,hesrt,samples/GSE260847/GSM8125592,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125593,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1984,25340,counts,pixel,4.052210356538153,platform_constant,True,H&E,4.052210356538153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125593,,,train,hesrt,samples/GSE260847/GSM8125593,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125594,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1723,25340,counts,pixel,4.0457499881864045,platform_constant,True,H&E,4.0457499881864045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125594,,,train,hesrt,samples/GSE260847/GSM8125594,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8125595,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2084,25340,counts,pixel,4.168000079358731,platform_constant,True,H&E,4.168000079358731,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125595,,,train,hesrt,samples/GSE260847/GSM8125595,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125596,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2182,25340,counts,pixel,4.20245948334639,platform_constant,True,H&E,4.20245948334639,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125596,,,train,hesrt,samples/GSE260847/GSM8125596,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8125597,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2132,25340,counts,pixel,4.09013169578027,platform_constant,True,H&E,4.09013169578027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125597,,,train,hesrt,samples/GSE260847/GSM8125597,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8125598,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2291,25340,counts,pixel,4.147990002925978,platform_constant,True,H&E,4.147990002925978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125598,,,train,hesrt,samples/GSE260847/GSM8125598,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125599,GSE260847,GSE260847,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,brain,luna,UBERON:0002298,brainstem,Brainstem,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2199,25340,counts,pixel,4.357999932538152,platform_constant,True,H&E,4.357999932538152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125599,,,train,hesrt,samples/GSE260847/GSM8125599,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8993724,GSE260926,GSE260926,scMultiome-seq and single-cell spatial HD data for the developing human knee,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001465,knee,knee,primary tissue,,,normal,luna,,,fetal,luna,fetal,E67,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,88814,18085,counts,um,1.0,verified,True,other bright-field stain (heuristic),1.5602449029106054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41520766,,GSM8993724,,,train,sda-all,samples/GSE260926/GSM8993724,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 0.58}",organ;life_stage,low_confidence_annotation
GSM8131850,GSE260998,GSE260998,Germinal Center Dark Zone harbors ATR-dependent determinants of T-cell exclusion that are also identified in aggressive lymphoma – Visium_FFPE_Spatial_Trasciptomics_project,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,mesenteric lymph node,primary tissue,,,perturbation,luna,,B6.129P2-Aicda tm1(cre)Mnz/J,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,706,32589,counts,pixel,4.009137142675485,platform_constant,True,H&E,4.009137142675485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38562878;40674145,,GSM8131850,,,train,hesrt,samples/GSE260998/GSM8131850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8131851,GSE260998,GSE260998,Germinal Center Dark Zone harbors ATR-dependent determinants of T-cell exclusion that are also identified in aggressive lymphoma – Visium_FFPE_Spatial_Trasciptomics_project,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,mesenteric lymph node,primary tissue,,,perturbation,luna,,B6N;129-Ilk tm1Star/J,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1272,32589,counts,pixel,3.9824122275628153,platform_constant,True,H&E,3.9824122275628153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38562878;40674145,,GSM8131851,,,train,hesrt,samples/GSE260998/GSM8131851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8134145,GSE261085,GSE261085,Spatial transcriptome sequencing of the human corpus cavernosum with normal erectile function,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0006609,corpus cavernosum,corpus cavernosum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,2292759,58735,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,zero_count_observations,VERIFIED,,,,39299236,,GSM8134145,,,train,sda-all,samples/GSE261085/GSM8134145,sda-tissue-disease-2.3,"{""organ"": 0.38, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8145250,GSE261487,GSE261487,Spatial transcriptome sequencing of the rat corpus cavernosum with normal erectile function,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,other,luna,UBERON:0006609,corpus cavernosum,corpus cavernosum,primary tissue,,,normal,luna,,normal,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU S1000,,,,2823,32883,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39299236,,GSM8145250,,,train,hesrt,samples/GSE261487/GSM8145250,sda-tissue-disease-2.4,"{""organ"": 0.84, ""sample_kind"": 0.8300000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8146484,GSE261545,GSE261545,Histopathological-based analysis of human kidney spatial transcriptomics data: toward precision pathology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,diabetic nephropathy,chronic kidney disease,adult,age rule: age in years,not stated,33 years,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2802,18085,counts,pixel,4.812409077079983,platform_constant,True,H&E,4.812409077079983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39097165,,GSM8146484,,,train,hesrt,samples/GSE261545/GSM8146484,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8153336,GSE261872,GSE261872,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,,Col4a3+/- Vehicle,adult,age rule: age with unit,adult,25 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2709,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.49999158312893416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153336,,,train,hesrt,samples/GSE261872/GSM8153336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8153337,GSE261872,GSE261872,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,,Col4a3+/- Nicotinamide riboside,adult,age rule: age with unit,adult,25 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1921,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.500008967578919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153337,,,train,hesrt,samples/GSE261872/GSM8153337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8153338,GSE261872,GSE261872,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,Alport syndrome,Col4a3-/- Vehicle,adult,age rule: age with unit,adult,25 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1474,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.500008967578919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153338,,,train,hesrt,samples/GSE261872/GSM8153338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8153339,GSE261872,GSE261872,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,Alport syndrome,Col4a3-/- Nicotinamide riboside,adult,age rule: age with unit,adult,25 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2644,32285,counts,pixel,0.3787851613880087,platform_constant,True,H&E,0.499993516198358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153339,,,train,hesrt,samples/GSE261872/GSM8153339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8153570,GSE261890,GSE261890,Cancer cell self-built physical barriers promote acquired resistance to immunotherapy [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,"immunotherapy-sensitive+veh, immunotherapy-resistant+veh",not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,bin,195289,28001,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8153570,,,train,sda-all,samples/GSE261890/GSM8153570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8153571,GSE261890,GSE261890,Cancer cell self-built physical barriers promote acquired resistance to immunotherapy [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,"immunotherapy-sensitive+anti-PD1, immunotherapy-resistant+anti-PD1",not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,bin,195868,28001,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8153571,,,train,sda-all,samples/GSE261890/GSM8153571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8155169,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4046,17943,counts,pixel,4.015000040149996,platform_constant,True,H&E,4.015000040149996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155169,,,train,hesrt,samples/GSE261958/GSM8155169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155170,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2897,17943,counts,pixel,4.133333399466673,platform_constant,True,H&E,4.133333399466673,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155170,,,train,hesrt,samples/GSE261958/GSM8155170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155171,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3784,17943,counts,pixel,4.196666537409335,platform_constant,True,H&E,4.196666537409335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155171,,,train,hesrt,samples/GSE261958/GSM8155171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155172,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4123,17943,counts,pixel,4.054166584569796,platform_constant,True,H&E,4.054166584569796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155172,,,train,hesrt,samples/GSE261958/GSM8155172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155173,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4644,17943,counts,pixel,4.233054180692269,platform_constant,True,H&E,4.233054180692269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155173,,,train,hesrt,samples/GSE261958/GSM8155173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155174,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3679,17943,counts,pixel,4.355162874581166,platform_constant,True,H&E,4.355162874581166,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155174,,,train,hesrt,samples/GSE261958/GSM8155174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155175,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3333,17943,counts,pixel,4.1522552882411885,platform_constant,True,H&E,4.1522552882411885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155175,,,train,hesrt,samples/GSE261958/GSM8155175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155176,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4372,17943,counts,pixel,4.420621160285734,platform_constant,True,H&E,4.420621160285734,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155176,,,train,hesrt,samples/GSE261958/GSM8155176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155177,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3726,17943,counts,pixel,4.149235570952363,platform_constant,True,H&E,4.149235570952363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155177,,,train,hesrt,samples/GSE261958/GSM8155177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155178,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4049,17943,counts,pixel,4.068364966377711,platform_constant,True,H&E,4.068364966377711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155178,,,train,hesrt,samples/GSE261958/GSM8155178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657777,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,331,18085,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657777,,,train,hesrt,samples/GSE261958/GSM8657777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657778,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4439,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657778,,,train,hesrt,samples/GSE261958/GSM8657778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657779,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4845,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657779,,,train,hesrt,samples/GSE261958/GSM8657779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657780,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4816,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657780,,,train,hesrt,samples/GSE261958/GSM8657780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657781,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4192,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657781,,,train,hesrt,samples/GSE261958/GSM8657781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657782,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4661,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657782,,,train,hesrt,samples/GSE261958/GSM8657782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657783,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4983,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657783,,,train,hesrt,samples/GSE261958/GSM8657783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657784,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4694,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657784,,,train,hesrt,samples/GSE261958/GSM8657784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657785,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4938,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657785,,,train,hesrt,samples/GSE261958/GSM8657785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657786,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,4563,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657786,,,train,hesrt,samples/GSE261958/GSM8657786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8657787,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,337,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657787,,,train,hesrt,samples/GSE261958/GSM8657787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657788,GSE261958+GSE283207,GSE261958,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Formalin-fixed paraffin-embedded hepatoblastoma,tumour tissue,MONDO:0018666,hepatoblastoma,disease,luna,hepatoblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,462,18085,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657788,,,train,hesrt,samples/GSE261958/GSM8657788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8157269,GSE262082,GSE262082,Molecular lineage and spatial distribution of subplate neurons in the human fetal cerebral cortex.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex of fetal brain,primary tissue,,,normal,luna,,,fetal,luna,fetal,gestational week 12 and 13,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1162,58735,counts,pixel,4.346336949619924,platform_constant,True,H&E,4.346336949619924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39495628,,GSM8157269,,,train,hesrt,samples/GSE262082/GSM8157269,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8157272,GSE262083,GSE262083,Young and Aged Striatal Astrocyte MERFISH Panel,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Bilateral Striatal Slice,primary tissue,,,normal,luna,,Aged,aged,luna,aged,18mo.,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,75494,383,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41006292,,GSM8157272,,,val,sda-all,samples/GSE262083/GSM8157272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8157273,GSE262083,GSE262083,Young and Aged Striatal Astrocyte MERFISH Panel,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Bilateral Striatal Slice,primary tissue,,,normal,luna,,Aged,aged,luna,aged,18mo.,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,82713,383,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41006292,,GSM8157273,,,val,sda-all,samples/GSE262083/GSM8157273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8158989,GSE262162+GSE262166,GSE262162,Treatment of cholangiocarcinoma using humanized monoclonal antibodies targeting Claudin-1 (CCA patient tissues),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,,tumour tissue,MONDO:0019087,cholangiocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,37234,970,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42234772,,GSM8158989,,,test,sda-all,samples/GSE262162/GSM8158989,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8158990,GSE262162+GSE262166,GSE262162,Treatment of cholangiocarcinoma using humanized monoclonal antibodies targeting Claudin-1 (CCA patient tissues),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,,tumour tissue,MONDO:0019087,cholangiocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,42587,970,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42234772,,GSM8158990,,,test,sda-all,samples/GSE262162/GSM8158990,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8161011,GSE262245,GSE262245,NEST: Spatially-mapped cell-cell communication patterns using a deep learning-based attention mechanism,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary resected tumor from pancreatic ductal adenocarcinoma stage II B,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,pancreatic ductal adenocarcinoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1406,36601,counts,pixel,4.429489157471357,platform_constant,True,H&E,4.429489157471357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40481363,,GSM8161011,,,train,hesrt,samples/GSE262245/GSM8161011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8161012,GSE262245,GSE262245,NEST: Spatially-mapped cell-cell communication patterns using a deep learning-based attention mechanism,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary resected tumor from pancreatic ductal adenocarcinoma stage II B,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,pancreatic ductal adenocarcinoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2298,36601,counts,pixel,4.157591222258848,platform_constant,True,H&E,4.157591222258848,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40481363,,GSM8161012,,,train,hesrt,samples/GSE262245/GSM8161012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8162516,GSE262276,GSE262276,Spatial transcriptomics of intraductal carcinoma of the prostate (IDCP),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,prostatic cancer,tumour tissue,MONDO:0005159;MONDO:0004970,prostate carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma pT2bN0M0, Gleason Score 4+5 with IDCP",,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4763,18085,counts,pixel,9.09988798586886,platform_constant,True,H&E,9.09988798586886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38732035,,GSM8162516,,,train,hesrt,samples/GSE262276/GSM8162516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8163337,GSE262322,GSE262322,Deep learning of enhancer codes highlights similarities between mammalian and avian telencephalon cell types [stereoseq],Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,109949,25237,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,39946451,,GSM8163337,,,train,sda-all,samples/GSE262322/GSM8163337,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8169577,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3548,25399,counts,pixel,4.0384615061538405,platform_constant,True,H&E,4.0384615061538405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169577,,,val,hesrt,samples/GSE262430/GSM8169577,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8169578,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4488,25399,counts,pixel,5.142222168889641,platform_constant,True,H&E,5.142222168889641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169578,,,val,hesrt,samples/GSE262430/GSM8169578,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8169579,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),IR surgery,intramyocardial injection of ECM hydrogel,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3923,25399,counts,pixel,5.035267291420124,platform_constant,True,H&E,5.035267291420124,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169579,,,val,hesrt,samples/GSE262430/GSM8169579,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8169580,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,IR surgery,intramyocardial injection of ECM hydrogel,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3735,25399,counts,pixel,4.036206387194961,platform_constant,True,H&E,4.036206387194961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169580,,,val,hesrt,samples/GSE262430/GSM8169580,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8169581,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4101,25399,counts,pixel,4.132400209967662,platform_constant,True,H&E,4.132400209967662,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169581,,,val,hesrt,samples/GSE262430/GSM8169581,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8169582,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4065,25399,counts,pixel,4.088943626421445,platform_constant,True,H&E,4.088943626421445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169582,,,val,hesrt,samples/GSE262430/GSM8169582,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8169583,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,mondo_predicate (Luna: perturbation),IR surgery,intramyocardial injection of ECM hydrogel,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3072,25399,counts,pixel,4.15433583677824,platform_constant,True,H&E,4.15433583677824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169583,,,val,hesrt,samples/GSE262430/GSM8169583,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8169584,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,IR surgery,intramyocardial injection of ECM hydrogel,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3929,25399,counts,pixel,4.25597190699202,platform_constant,True,H&E,4.25597190699202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169584,,,val,hesrt,samples/GSE262430/GSM8169584,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8169585,GSE262430,GSE262430,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,IR surgery,intramyocardial injection of ECM hydrogel,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2593,25399,counts,pixel,4.203448146269752,platform_constant,True,H&E,4.203448146269752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169585,,,val,hesrt,samples/GSE262430/GSM8169585,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171818,GSE262569,GSE262569,Smooth muscle-derived resident vascular adventitial progenitor cell contribution to cardiac fibrosis and inflammation is dependent on KLF4 [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Saline 4-Week,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1769,32574,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.9651846736715086,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the fluorescence should be stated,,,GSM8171818,,,train,sda-all,samples/GSE262569/GSM8171818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8171819,GSE262569,GSE262569,Smooth muscle-derived resident vascular adventitial progenitor cell contribution to cardiac fibrosis and inflammation is dependent on KLF4 [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,perturbation,luna,,AngII 4-Week,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2622,32574,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.9928171725595636,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the fluorescence should be stated,,,GSM8171819,,,train,sda-all,samples/GSE262569/GSM8171819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8182904,GSE262998,GSE262998,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Sarcoid Lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,660,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.88927179530109,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182904,,,train,sda-all,samples/GSE262998/GSM8182904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8182905,GSE262998,GSE262998,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Sarcoid Lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1859,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.8843875524453697,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182905,,,train,sda-all,samples/GSE262998/GSM8182905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8182906,GSE262998,GSE262998,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Sarcoid Lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1051,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.890638332560795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182906,,,train,sda-all,samples/GSE262998/GSM8182906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8182907,GSE262998,GSE262998,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Healthy Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1642,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.902021087768381,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182907,,,train,sda-all,samples/GSE262998/GSM8182907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184299,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4917,18085,counts,pixel,4.988340860649879,platform_constant,True,H&E,4.988340860649879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184299,,,train,hesrt,samples/GSE263034/GSM8184299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184300,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,11.05129738483503,platform_constant,True,H&E,11.05129738483503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184300,,,train,hesrt,samples/GSE263034/GSM8184300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184301,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.391629991765962,platform_constant,True,H&E,10.391629991765962,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184301,,,train,hesrt,samples/GSE263034/GSM8184301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184302,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.34242166060639,platform_constant,True,H&E,10.34242166060639,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184302,,,train,hesrt,samples/GSE263034/GSM8184302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184303,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,11.984236117368583,platform_constant,True,H&E,11.984236117368583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184303,,,train,hesrt,samples/GSE263034/GSM8184303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184304,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.177050334329818,platform_constant,True,H&E,10.177050334329818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184304,,,train,hesrt,samples/GSE263034/GSM8184304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184305,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.69675579679064,platform_constant,True,H&E,10.69675579679064,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184305,,,train,hesrt,samples/GSE263034/GSM8184305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184306,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,8.222903640285452,platform_constant,True,H&E,8.222903640285452,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184306,,,train,hesrt,samples/GSE263034/GSM8184306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184307,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,9.680247158006635,platform_constant,True,H&E,9.680247158006635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184307,,,train,hesrt,samples/GSE263034/GSM8184307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8184308,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.62915681510135,platform_constant,True,H&E,10.62915681510135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184308,,,train,hesrt,samples/GSE263034/GSM8184308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184309,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,14.46942691558419,platform_constant,True,H&E,14.46942691558419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184309,,,train,hesrt,samples/GSE263034/GSM8184309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184310,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.086504850478617,platform_constant,True,H&E,10.086504850478617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184310,,,train,hesrt,samples/GSE263034/GSM8184310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184311,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,9.680247158006528,platform_constant,True,H&E,9.680247158006528,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184311,,,train,hesrt,samples/GSE263034/GSM8184311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184312,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,12.662086444888521,platform_constant,True,H&E,12.662086444888521,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184312,,,train,hesrt,samples/GSE263034/GSM8184312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184313,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,12.436032983035675,platform_constant,True,H&E,12.436032983035675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184313,,,train,hesrt,samples/GSE263034/GSM8184313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184314,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,11.393140193817283,platform_constant,True,H&E,11.393140193817283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184314,,,train,hesrt,samples/GSE263034/GSM8184314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184315,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,9.780759016376019,platform_constant,True,H&E,9.780759016376019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184315,,,train,hesrt,samples/GSE263034/GSM8184315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184316,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,11.001881113189224,platform_constant,True,H&E,11.001881113189224,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184316,,,train,hesrt,samples/GSE263034/GSM8184316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184317,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,Alzheimer's disease,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.62915681510146,platform_constant,True,H&E,10.62915681510146,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184317,,,train,hesrt,samples/GSE263034/GSM8184317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184318,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,,,normal,luna,,Non-Neurological Disease (NND),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,12.98669571985796,platform_constant,True,H&E,12.98669571985796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184318,,,train,hesrt,samples/GSE263034/GSM8184318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184319,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,,,normal,luna,,Non-Neurological Disease (NND),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.450141305118581,platform_constant,True,H&E,10.450141305118581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184319,,,train,hesrt,samples/GSE263034/GSM8184319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184320,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,,,normal,luna,,Non-Neurological Disease (NND),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4488,18085,counts,pixel,8.891429813877663,platform_constant,True,H&E,8.891429813877663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184320,,,train,hesrt,samples/GSE263034/GSM8184320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184321,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,,,normal,luna,,Non-Neurological Disease (NND),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4687,18085,counts,pixel,13.215280191943878,platform_constant,True,H&E,13.215280191943878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184321,,,train,hesrt,samples/GSE263034/GSM8184321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184322,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,,,normal,luna,,Non-Neurological Disease (NND),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4332,18085,counts,pixel,12.133697678222337,platform_constant,True,H&E,12.133697678222337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184322,,,train,hesrt,samples/GSE263034/GSM8184322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184323,GSE263034,GSE263034,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001870,frontal cortex,Frontal Cortex,primary tissue,,,normal,luna,,Non-Neurological Disease (NND),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4973,18085,counts,pixel,13.215125311343094,platform_constant,True,H&E,13.215125311343094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184323,,,train,hesrt,samples/GSE263034/GSM8184323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185212,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002702,middle frontal gyrus,Left Middle Frontal Gyrus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-3fdc3d774636,library_alias,GSM8185220,train,sda-all,samples/GSE263079/GSM8185212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8185213,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002769,superior temporal gyrus,Left Superior Temporal Gyrus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-97e7bcbfe560,library_alias,GSM8185221,train,sda-all,samples/GSE263079/GSM8185213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185214,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006088,inferior parietal cortex,Left Inferior Parietal Lobule,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-7fbf26e24598,library_alias,GSM8185222,train,sda-all,samples/GSE263079/GSM8185214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8185215,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Posterior Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,40050704,,CG-72e422188c38,library_alias,GSM8185223,train,sda-all,samples/GSE263079/GSM8185215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8185216,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002702,middle frontal gyrus,Left Middle Frontal Gyrus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,lecanemab Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-91e1b6442348,library_alias,GSM8185224,train,sda-all,samples/GSE263079/GSM8185216,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8185217,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002769,superior temporal gyrus,Left Superior Temporal Gyrus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,lecanemab Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-35378630e986,library_alias,GSM8185225,train,sda-all,samples/GSE263079/GSM8185217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185218,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006088,inferior parietal cortex,Left Inferior Parietal Lobule,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,lecanemab Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-df1157fd57ff,library_alias,GSM8185226,train,sda-all,samples/GSE263079/GSM8185218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8185219,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Posterior Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,lecanemab Immunized AD (iAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,,,,40050704,,CG-f4632808653b,library_alias,GSM8185227,train,sda-all,samples/GSE263079/GSM8185219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8675576,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002702,middle frontal gyrus,Left Middle Frontal Gyrus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7441,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,40050704,,CG-33248fbf5205,library_alias,GSM8675584,train,sda-all,samples/GSE263079/GSM8675576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675577,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002769,superior temporal gyrus,Left Superior Temporal Gyrus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14108,18120,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,40050704,,CG-82d11bb923f1,library_alias,GSM8675585,train,sda-all,samples/GSE263079/GSM8675577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8675578,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006088,inferior parietal cortex,Left Inferior Parietal Lobule,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9564,18120,counts,um,1.0,verified,True,fluorescence: immunofluorescence,7.075183968716441,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40050704,,CG-5baa762b2007,library_alias,GSM8675586,train,sda-all,samples/GSE263079/GSM8675578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675579,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Posterior Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10764,18120,counts,um,1.0,verified,True,fluorescence: immunofluorescence,7.253270006680917,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40050704,,CG-55668d846e68,library_alias,GSM8675587,train,sda-all,samples/GSE263079/GSM8675579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675582,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006088,inferior parietal cortex,Left Inferior Parietal Lobule,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13299,18120,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,,,,40050704,,CG-3c3335769421,library_alias,GSM8675590,train,sda-all,samples/GSE263079/GSM8675582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675583,GSE263079,GSE263079,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Posterior Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-Immunized AD (nAD),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10003,18120,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,,,,40050704,,CG-cc036fae2592,library_alias,GSM8675591,train,sda-all,samples/GSE263079/GSM8675583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8185653,GSE263088,GSE263088,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2716,19465,counts,um,1.0,verified,True,H&E-like (heuristic),3.8958036958173055,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185653,,,train,sda-all,samples/GSE263088/GSM8185653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8185654,GSE263088,GSE263088,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019338,sarcoidosis,disease,mondo_predicate (Luna: perturbation),,"Rapamycin, 8h",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2276,19465,counts,um,1.0,verified,True,H&E-like (heuristic),3.9266904613119595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185654,,,train,sda-all,samples/GSE263088/GSM8185654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185655,GSE263088,GSE263088,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019338,sarcoidosis,disease,mondo_predicate (Luna: perturbation),,"Rapamycin, 2h",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2791,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.001259568355681,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185655,,,train,sda-all,samples/GSE263088/GSM8185655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185656,GSE263088,GSE263088,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019338,sarcoidosis,disease,mondo_predicate (Luna: perturbation),,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2174,19465,counts,um,1.0,verified,True,H&E-like (heuristic),3.8960284112791475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185656,,,train,sda-all,samples/GSE263088/GSM8185656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8187469,GSE263196,GSE263196,Spatial transcriptomic sequencing data of human small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3860,33542,counts,um,1.0,verified,True,undetermined,13.590174146641075,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187469,,,train,sda-all,samples/GSE263196/GSM8187469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8187470,GSE263196,GSE263196,Spatial transcriptomic sequencing data of human small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2709,33542,counts,um,1.0,verified,True,H&E-like (heuristic),14.042014367231154,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187470,,,train,sda-all,samples/GSE263196/GSM8187470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8187471,GSE263196,GSE263196,Spatial transcriptomic sequencing data of human small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3030,33542,counts,um,1.0,verified,True,H&E-like (heuristic),13.835421726948812,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187471,,,train,sda-all,samples/GSE263196/GSM8187471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8187472,GSE263196,GSE263196,Spatial transcriptomic sequencing data of human small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3520,33542,counts,um,1.0,verified,True,H&E-like (heuristic),14.14559453296679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187472,,,train,sda-all,samples/GSE263196/GSM8187472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8187473,GSE263196,GSE263196,Spatial transcriptomic sequencing data of human small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2655,33542,counts,um,1.0,verified,True,undetermined,13.480321660050468,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187473,,,train,sda-all,samples/GSE263196/GSM8187473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189150,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,male,extracted field,male,GSE263281:canine 1,canine 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,798,35555,counts,pixel,4.137396499963007,platform_constant,True,H&E,4.137396499963007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189150,,,train,hesrt,samples/GSE263281/GSM8189150,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189151,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,perturbation,luna,,Grafted,not stated,luna,not stated,,male,extracted field,male,GSE263281:canine 1,canine 1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,968,35555,counts,pixel,7.511637446338835,platform_constant,True,H&E,7.511637446338835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189151,,,train,hesrt,samples/GSE263281/GSM8189151,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189152,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,male,extracted field,male,GSE263281:canine 2,canine 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,393,35555,counts,pixel,5.934545435554907,platform_constant,True,H&E,5.934545435554907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189152,,,train,hesrt,samples/GSE263281/GSM8189152,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189153,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,perturbation,luna,,Distension,not stated,luna,not stated,,male,extracted field,male,GSE263281:canine 2,canine 2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,916,35555,counts,pixel,5.934545435554907,platform_constant,True,H&E,5.934545435554907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189153,,,train,hesrt,samples/GSE263281/GSM8189153,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8189154,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,male,extracted field,male,GSE263281:canine 3,canine 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,305,35555,counts,pixel,4.36454555084916,platform_constant,True,H&E,4.36454555084916,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189154,,,train,hesrt,samples/GSE263281/GSM8189154,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8189155,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,perturbation,luna,,Distension,not stated,luna,not stated,,male,extracted field,male,GSE263281:canine 3,canine 3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,725,35555,counts,pixel,6.54545402181822,platform_constant,True,H&E,6.54545402181822,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189155,,,train,hesrt,samples/GSE263281/GSM8189155,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8189156,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,female,extracted field,female,GSE263281:canine 4,canine 4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,305,35555,counts,pixel,4.04814825105208,platform_constant,True,H&E,4.04814825105208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189156,,,train,hesrt,samples/GSE263281/GSM8189156,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8189157,GSE263281,GSE263281,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,blood vessel,luna,UBERON:0001106,cephalic vein,Cephalic vein,primary tissue,,,perturbation,luna,,Distension,not stated,luna,not stated,,female,extracted field,female,GSE263281:canine 4,canine 4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,493,35555,counts,pixel,4.092592482092592,platform_constant,True,H&E,4.092592482092592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189157,,,train,hesrt,samples/GSE263281/GSM8189157,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189707,GSE263333,GSE263333,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2133,48440,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,no image,39345645;39870864,,GSM8189707,,,train,sda-all,samples/GSE263333/GSM8189707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189709,GSE263333,GSE263333,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2224,48440,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,no image,39345645;39870864,,GSM8189709,,,train,sda-all,samples/GSE263333/GSM8189709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8189712,GSE263333,GSE263333,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,fixed frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2500,48440,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,FAIL,registration correct (acceptance too strict),"expression looks correct, but the image is missing",39345645;39870864,,GSM8189712,,,train,sda-all,samples/GSE263333/GSM8189712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8494158,GSE263333,GSE263333,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,9686,48440,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,no image at all,39345645;39870864,,GSM8494158,,,train,sda-all,samples/GSE263333/GSM8494158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8192449,GSE263450,GSE263450,Spatial transcriptomic mapping of the mouse brain in chronic stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,C57BL/6J,not stated,luna,not stated,,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,37036,30011,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192449,,,test,sda-all,samples/GSE263450/GSM8192449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192450,GSE263450,GSE263450,Spatial transcriptomic mapping of the mouse brain in chronic stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,41790,30011,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192450,,,test,sda-all,samples/GSE263450/GSM8192450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8192451,GSE263450,GSE263450,Spatial transcriptomic mapping of the mouse brain in chronic stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,52151,30011,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192451,,,test,sda-all,samples/GSE263450/GSM8192451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192452,GSE263450,GSE263450,Spatial transcriptomic mapping of the mouse brain in chronic stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,52334,30011,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192452,,,test,sda-all,samples/GSE263450/GSM8192452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192453,GSE263450,GSE263450,Spatial transcriptomic mapping of the mouse brain in chronic stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,C57BL/6J,not stated,luna,not stated,,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,36509,30011,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192453,,,test,sda-all,samples/GSE263450/GSM8192453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192454,GSE263450,GSE263450,Spatial transcriptomic mapping of the mouse brain in chronic stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,C57BL/6J,not stated,luna,not stated,,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,46848,30011,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192454,,,test,sda-all,samples/GSE263450/GSM8192454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8193670,GSE263498,GSE263498,Open-ST: High-resolution spatial transcriptomics in 3D [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,laryngeal squamous cell carcinoma (pT3 pN2c (2/29) L0 V0 Pn0 G2 R0),tumour tissue,MONDO:0005595,laryngeal squamous cell carcinoma,disease,luna,,,adult,age rule: age in years,adult,56 year old,male,extracted field,male,,,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,159362,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000088600118133,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38917789,,GSM8193670,,,train,sda-all,samples/GSE263498/GSM8193670,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8193671,GSE263498,GSE263498,Open-ST: High-resolution spatial transcriptomics in 3D [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,metastatic level III cervical lymph node,metastasis,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,adult,age rule: age in years,adult,56 year old,male,extracted field,male,,,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,309309,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000008611780916,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38917789,,GSM8193671,,,train,sda-all,samples/GSE263498/GSM8193671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8194116,GSE263536,GSE263536,An Allele Agnostic Mutant KRAS Inhibitor Demonstrates Broad Spectrum Tumour Growth Inhibition in Pancreatic Ductal Adenocarcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,Vehicle/PanKRASi,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4996,19465,counts,pixel,6.354021690692121,platform_constant,True,H&E,6.354021690692121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8194116,,,train,hesrt,samples/GSE263536/GSM8194116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.64, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8195047,GSE263591+GSE263607,GSE263591,Cardiac organoids for Hypertophic cardiomyopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0000948,heart,Cardiac organoids,organoid,MONDO:0004994,cardiomyopathy,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,male,extracted field,Male,,,,,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,21457,986,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39594661,,GSM8195047,,,train,sda-all,samples/GSE263591/GSM8195047,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.78, ""life_stage"": 0.99}",,
GSM8196101,GSE263658,GSE263658,Spatial Transcriptomics in Bone Mechanomics: Exploring the Mechanoregulation of Fracture Healing in the Era of Spatial Omics.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000981,femur,Femur,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1962,19465,counts,pixel,4.117466871137864,platform_constant,True,H&E,4.117466871137864,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39742473,10.1126/sciadv.adp8496,GSM8196101,,,train,hesrt,samples/GSE263658/GSM8196101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8196102,GSE263658,GSE263658,Spatial Transcriptomics in Bone Mechanomics: Exploring the Mechanoregulation of Fracture Healing in the Era of Spatial Omics.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000981,femur,Femur,primary tissue,,,perturbation,luna,,Loaded,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1436,19465,counts,pixel,4.545454545454546,platform_constant,True,H&E,4.545454545454546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39742473,10.1126/sciadv.adp8496,GSM8196102,,,train,hesrt,samples/GSE263658/GSM8196102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8199179,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,APP-NLGF,aged,age rule: age with unit,aged,18M,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,176772,26730,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199179,,,train,sda-all,samples/GSE263793/GSM8199179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8199180,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,APP-NLGF,aged,age rule: age with unit,aged,18M,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,176867,27040,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199180,,,train,sda-all,samples/GSE263793/GSM8199180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8199181,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,C57BL/6J,aged,age rule: age with unit,aged,18M,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,177831,26362,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199181,,,train,sda-all,samples/GSE263793/GSM8199181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8199182,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,APP-NLGF &  C57BL/6J,adult,age rule: age with unit,adult,3M,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,180057,27281,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199182,,,train,sda-all,samples/GSE263793/GSM8199182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8199183,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,APP-NLGF &  C57BL/6J,adult,age rule: age with unit,adult,3M,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,176768,26811,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199183,,,train,sda-all,samples/GSE263793/GSM8199183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8199188,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,MONDO:0019065,amyloidosis,disease,luna,AD,,aged,age rule: age with unit,aged,18M,male,extracted field,male,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,21713,960,counts,pixel,,unresolved,False,,,ABSENT,FAILED,VERIFIED,,,VERIFIED,,,,38819990,,GSM8199188,,,train,sda-all,samples/GSE263793/GSM8199188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8199189,GSE263793,GSE263793,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,MONDO:0019065,amyloidosis,disease,luna,AD,,aged,age rule: age with unit,aged,18M,male,extracted field,male,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,21404,960,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38819990,,GSM8199189,,,train,sda-all,samples/GSE263793/GSM8199189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8200276,GSE263860,GSE263860,"Multi-omics sequencing reveals the signature of the genome, cell composition and transcriptome of nodal RDD [ST]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,RDD lesion,tumour tissue,,,disease,luna,Rosai-Dorfman disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3472,58825,counts,pixel,4.056830777646162,platform_constant,True,H&E,4.056830777646162,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8200276,,,train,hesrt,samples/GSE263860/GSM8200276,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.55, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8207499,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Non-recurrent,adult,age rule: bare number read as years,adult,51,female,extracted field,female,GSE263920:GSM8207499,GSM8207499,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3496,36601,counts,pixel,2.7236735535142165,platform_constant,True,H&E,2.7236735535142165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207499,,,val,hesrt,samples/GSE263920/GSM8207499,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207500,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,,,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Non-recurrent,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE263920:GSM8207500,GSM8207500,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3598,36601,counts,pixel,2.6315789473684212,platform_constant,True,H&E,2.6315789473684212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207500,,,val,hesrt,samples/GSE263920/GSM8207500,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207501,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Non-recurrent,adult,age rule: bare number read as years,adult,64,female,extracted field,female,GSE263920:GSM8207501,GSM8207501,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2632,36601,counts,pixel,2.7236735535142165,platform_constant,True,H&E,2.7236735535142165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207501,,,val,hesrt,samples/GSE263920/GSM8207501,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207502,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Recurrent,adult,age rule: bare number read as years,adult,45,female,extracted field,female,GSE263920:GSM8207502,GSM8207502,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3613,36601,counts,pixel,2.7896417632583534,platform_constant,True,H&E,2.7896417632583534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207502,,,val,hesrt,samples/GSE263920/GSM8207502,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207503,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Recurrent,adult,age rule: bare number read as years,adult,61,female,extracted field,female,GSE263920:GSM8207503,GSM8207503,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4033,36601,counts,pixel,2.7896417632583534,platform_constant,True,H&E,2.7896417632583534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207503,,,val,hesrt,samples/GSE263920/GSM8207503,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207504,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,,,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Recurrent,adult,age rule: bare number read as years,adult,49,female,extracted field,female,GSE263920:GSM8207504,GSM8207504,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4555,36601,counts,pixel,2.9411764705882355,platform_constant,True,H&E,2.9411764705882355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207504,,,val,hesrt,samples/GSE263920/GSM8207504,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8207505,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,,,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Recurrent,adult,age rule: bare number read as years,adult,49,female,extracted field,female,GSE263920:GSM8207505,GSM8207505,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3100,36601,counts,pixel,2.7236735535142165,platform_constant,True,H&E,2.7236735535142165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207505,,,val,hesrt,samples/GSE263920/GSM8207505,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.31, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207506,GSE263920,GSE263920,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,high-grade serous ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,high-grade serous ovarian cancer,Recurrent,adult,age rule: bare number read as years,adult,34,female,extracted field,female,GSE263920:GSM8207506,GSM8207506,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4520,36601,counts,pixel,2.7777777777777777,platform_constant,True,H&E,2.7777777777777777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207506,,,val,hesrt,samples/GSE263920/GSM8207506,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 0.98}",organ;uberon,low_confidence_annotation
GSM8211614,GSE264107,GSE264107,A Single-Cell Woodchuck Liver Atlas Identifies Healthy and Disease-related Cellular Programs Conserved in Human [spatial transcriptomics],Marmota monax,9995,woodchuck,Marmota monax,9995,,False,False,GEO organism field,Marmota monax,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2948,27295,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8211614,,,train,sda-all,samples/GSE264107/GSM8211614,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8211615,GSE264107,GSE264107,A Single-Cell Woodchuck Liver Atlas Identifies Healthy and Disease-related Cellular Programs Conserved in Human [spatial transcriptomics],Marmota monax,9995,woodchuck,Marmota monax,9995,,False,False,GEO organism field,Marmota monax,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2888,27295,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8211615,,,train,sda-all,samples/GSE264107/GSM8211615,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8208231,GSE264233,GSE264233,Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1977,17943,counts,pixel,5.307478107790751,platform_constant,True,H&E,5.307478107790751,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8208231,,,val,hesrt,samples/GSE264233/GSM8208231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8208232,GSE264233,GSE264233,Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1036,17943,counts,pixel,4.737964914563186,platform_constant,True,H&E,4.737964914563186,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8208232,,,val,hesrt,samples/GSE264233/GSM8208232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.21, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8208234,GSE264233,GSE264233,Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2025,17943,counts,pixel,5.307778701767571,platform_constant,True,H&E,5.307778701767571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8208234,,,val,hesrt,samples/GSE264233/GSM8208234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8216244,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005148,type 2 diabetes mellitus,disease,luna,T2D,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1081,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.005930677188378,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40890166,,GSM8216244,,,train,sda-all,samples/GSE264331/GSM8216244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216245,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005148,type 2 diabetes mellitus,disease,luna,T2D,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1026,36601,counts,pixel,4.375739824765737,platform_constant,True,H&E,4.375739824765737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216245,,,train,hesrt,samples/GSE264331/GSM8216245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216246,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1849,36601,counts,pixel,4.091154468787698,platform_constant,True,H&E,4.091154468787698,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216246,,,train,hesrt,samples/GSE264331/GSM8216246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216247,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1774,36601,counts,pixel,4.091193209374453,platform_constant,True,H&E,4.091193209374453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216247,,,train,hesrt,samples/GSE264331/GSM8216247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216248,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1619,36601,counts,pixel,4.137718946994637,platform_constant,True,H&E,4.137718946994637,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216248,,,train,hesrt,samples/GSE264331/GSM8216248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216249,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1681,36601,counts,pixel,4.142251447535965,platform_constant,True,H&E,4.142251447535965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216249,,,train,hesrt,samples/GSE264331/GSM8216249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216252,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005148,type 2 diabetes mellitus,disease,luna,T2D,T2D,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,702,36601,counts,pixel,0.2923926611579401,platform_constant,True,H&E,0.500010119615907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216252,,,train,hesrt,samples/GSE264331/GSM8216252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216253,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005148,type 2 diabetes mellitus,disease,luna,T2D,T2D,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,721,36601,counts,pixel,0.2923926611579401,platform_constant,True,H&E,0.5000054916841026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216253,,,train,hesrt,samples/GSE264331/GSM8216253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216254,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,NGT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1690,36601,counts,pixel,0.29238641194261267,platform_constant,True,H&E,0.5000125783953269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216254,,,train,hesrt,samples/GSE264331/GSM8216254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216255,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,NGT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1575,36601,counts,pixel,0.2923926611579401,platform_constant,True,H&E,0.4999980259939613,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216255,,,train,hesrt,samples/GSE264331/GSM8216255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216256,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,NGT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2168,36601,counts,pixel,0.29239641087947615,platform_constant,True,H&E,0.50000159555097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216256,,,train,hesrt,samples/GSE264331/GSM8216256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216257,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,NGT,NGT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1934,36601,counts,pixel,0.29239641087947615,platform_constant,True,H&E,0.4999992844196634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216257,,,train,hesrt,samples/GSE264331/GSM8216257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216258,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005148,type 2 diabetes mellitus,disease,luna,T2D,T2D,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2284,36601,counts,pixel,0.2915439504656608,platform_constant,True,H&E,0.5000054280006929,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216258,,,train,hesrt,samples/GSE264331/GSM8216258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216259,GSE264331,GSE264331,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005148,type 2 diabetes mellitus,disease,luna,T2D,T2D,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2257,36601,counts,pixel,0.29239641087947615,platform_constant,True,H&E,0.4999941301106646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216259,,,train,hesrt,samples/GSE264331/GSM8216259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216268,GSE264334,GSE264334,Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Renal Biopsy,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,Renal Disease Biopsy: IgAN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,30802,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49995580636388354,VERIFIED,ABSENT,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,38898271,,GSM8216268,,,train,sda-all,samples/GSE264334/GSM8216268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8217624,GSE264398,GSE264398,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Fetal lung tissue,primary tissue,,,normal,luna,,,fetal,luna,fetal,15 gestational weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3949,18085,counts,pixel,5.732491793201414,platform_constant,True,H&E,5.732491793201414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003323,,GSM8217624,,,train,hesrt,samples/GSE264398/GSM8217624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8217625,GSE264398,GSE264398,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Fetal lung tissue,primary tissue,,,normal,luna,,,fetal,luna,fetal,18 gestational weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4002,18085,counts,pixel,6.537362568589588,platform_constant,True,H&E,6.537362568589588,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003323,,GSM8217625,,,train,hesrt,samples/GSE264398/GSM8217625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8217893,GSE264425,GSE264425,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,fetal lung tissue,primary tissue,,,normal,luna,,,fetal,luna,fetal,GW 15,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,864688,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999427681882697,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39003323,,GSM8217893,,,train,sda-all,samples/GSE264425/GSM8217893,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8217894,GSE264425,GSE264425,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,fetal lung tissue,primary tissue,,,normal,luna,,,fetal,luna,fetal,GW 18,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,980410,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896351575456,VERIFIED,ABSENT,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,39003323,,GSM8217894,,,train,sda-all,samples/GSE264425/GSM8217894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226199,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br2720,Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3762,36601,counts,pixel,4.451057817558416,platform_constant,True,H&E,4.451057817558416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226199,,,train,hesrt,samples/GSE264692/GSM8226199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8226200,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br2743,Br2743,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2618,36601,counts,pixel,4.5489169722171505,platform_constant,True,H&E,4.5489169722171505,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226200,,,train,hesrt,samples/GSE264692/GSM8226200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8226201,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br3942,Br3942,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,4.548706784421283,platform_constant,True,H&E,4.548706784421283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226201,,,train,hesrt,samples/GSE264692/GSM8226201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226202,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br6423,Br6423,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3675,36601,counts,pixel,5.259746926708571,platform_constant,True,H&E,5.259746926708571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226202,,,train,hesrt,samples/GSE264692/GSM8226202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8226203,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br6432,Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4697,36601,counts,pixel,4.548736425703956,platform_constant,True,H&E,4.548736425703956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226203,,,train,hesrt,samples/GSE264692/GSM8226203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226204,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br6471,Br6471,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4669,36601,counts,pixel,4.4350181268238265,platform_constant,True,H&E,4.4350181268238265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226204,,,train,hesrt,samples/GSE264692/GSM8226204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226205,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br6522,Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4873,36601,counts,pixel,4.4350181268238265,platform_constant,True,H&E,4.4350181268238265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226205,,,train,hesrt,samples/GSE264692/GSM8226205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8226206,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br8325,Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4518,36601,counts,pixel,4.435198694809457,platform_constant,True,H&E,4.435198694809457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226206,,,train,hesrt,samples/GSE264692/GSM8226206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8226207,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br8492,Br8492,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4625,36601,counts,pixel,4.4350181268238265,platform_constant,True,H&E,4.4350181268238265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226207,,,train,hesrt,samples/GSE264692/GSM8226207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8226208,GSE264692,GSE264692,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,hippocampus,primary tissue,,,normal,luna,normal,neurotypical,not stated,luna,not stated,,unknown,not stated,,GSE264692:Br8667,Br8667,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4686,36601,counts,pixel,5.23176881557771,platform_constant,True,H&E,5.23176881557771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226208,,,train,hesrt,samples/GSE264692/GSM8226208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8229742,GSE265828,GSE265828,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1175,21885,counts,um,1.0,verified,True,H&E-like (heuristic),4.085602430747868,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229742,,,val,sda-all,samples/GSE265828/GSM8229742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8229743,GSE265828,GSE265828,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,myocardial infarction,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1825,21885,counts,um,1.0,verified,True,H&E-like (heuristic),4.49347478608157,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229743,,,val,sda-all,samples/GSE265828/GSM8229743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8229744,GSE265828,GSE265828,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,myocardial infarction,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1572,21885,counts,um,1.0,verified,True,H&E-like (heuristic),4.48399375653996,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229744,,,val,sda-all,samples/GSE265828/GSM8229744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8229745,GSE265828,GSE265828,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,myocardial infarction,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1424,21885,counts,um,1.0,verified,True,H&E-like (heuristic),4.378208948140522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229745,,,val,sda-all,samples/GSE265828/GSM8229745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8582411,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,751,39210,unknown,um,1.0,verified,True,toluidine blue,4.282080640123186,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582411,,,train,sda-all,samples/GSE266007/GSM8582411,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.86}",,
GSM8582412,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,831,39210,unknown,um,1.0,verified,True,toluidine blue,4.274474613489253,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582412,,,train,sda-all,samples/GSE266007/GSM8582412,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.78}",,
GSM8582413,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,753,39210,unknown,um,1.0,verified,True,toluidine blue,4.264804506840143,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582413,,,train,sda-all,samples/GSE266007/GSM8582413,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.8}",,
GSM8582414,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,507,39210,unknown,um,1.0,verified,True,toluidine blue,4.175114022264149,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,"plant stain, probably not H&E; registration is correct",41039501,,GSM8582414,,,train,sda-all,samples/GSE266007/GSM8582414,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.6900000000000001}",,
GSM8582415,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,492,39210,unknown,um,1.0,verified,True,toluidine blue,4.17650682309922,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,"plant stain, probably not H&E; registration is correct",41039501,,GSM8582415,,,train,sda-all,samples/GSE266007/GSM8582415,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": NaN, ""life_stage"": 0.73}",,
GSM8582416,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1121,39210,unknown,um,1.0,verified,True,toluidine blue,4.175509943788373,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,plant sample,41039501,,GSM8582416,,,train,sda-all,samples/GSE266007/GSM8582416,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": NaN, ""life_stage"": 0.71}",,
GSM8582417,GSE266007,GSE266007,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,Zea mays,4577,maize,Zea mays,4577,,False,False,GEO organism field,Zea mays,,plant,luna,,,early ear,primary tissue,,,normal,luna,,B73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,772,39210,unknown,um,1.0,verified,True,toluidine blue,4.172914482879154,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582417,,,train,sda-all,samples/GSE266007/GSM8582417,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": NaN, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM8241316,GSE266136,GSE266136,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,proximal small intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Standard_Diet_6dpi,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3831,32285,counts,pixel,4.148965623454898,platform_constant,True,H&E,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241316,,,val,hesrt,samples/GSE266136/GSM8241316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8241317,GSE266136,GSE266136,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,proximal small intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,GW3965_Diet_6dpi,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4679,32285,counts,pixel,4.092517111571127,platform_constant,True,H&E,4.092517111571127,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241317,,,val,hesrt,samples/GSE266136/GSM8241317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8241318,GSE266136,GSE266136,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,proximal small intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Standard_Diet_14dpi,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4346,32285,counts,pixel,4.148965623454898,platform_constant,True,H&E,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241318,,,val,hesrt,samples/GSE266136/GSM8241318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM8241319,GSE266136,GSE266136,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,proximal small intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,GW3965_Diet_14dpi,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3478,32285,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241319,,,val,hesrt,samples/GSE266136/GSM8241319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM8241481,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3115,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241481,,,train,sda-all,samples/GSE266147/GSM8241481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8241482,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,5 x 2Gy Irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3078,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241482,,,train,sda-all,samples/GSE266147/GSM8241482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8241483,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2538,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241483,,,train,sda-all,samples/GSE266147/GSM8241483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8241484,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,5 x 2Gy Irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3099,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241484,,,train,sda-all,samples/GSE266147/GSM8241484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8241485,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,5 x 2Gy Irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2087,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241485,,,train,sda-all,samples/GSE266147/GSM8241485,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241486,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1602,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241486,,,train,sda-all,samples/GSE266147/GSM8241486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8241487,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2466,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241487,,,train,sda-all,samples/GSE266147/GSM8241487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241488,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3281,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241488,,,train,sda-all,samples/GSE266147/GSM8241488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8241489,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2760,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241489,,,train,sda-all,samples/GSE266147/GSM8241489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241490,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,5 x 2Gy Irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3077,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241490,,,train,sda-all,samples/GSE266147/GSM8241490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241491,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,5 x 2Gy Irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2481,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241491,,,train,sda-all,samples/GSE266147/GSM8241491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8241492,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,5 x 2Gy Irradiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3316,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241492,,,train,sda-all,samples/GSE266147/GSM8241492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8241493,GSE266147+GSE266149,GSE266147,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0001657,brain cancer,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3347,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39137777,,GSM8241493,,,train,sda-all,samples/GSE266147/GSM8241493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8243006,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0009951,main olfactory bulb,Main Olfactory Bulb,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,Female,,,fresh frozen,fresh-frozen,Other,release v3,Array-seq,sequencing-based,Array-seq,,,spot,974016,32285,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,39562752,,GSM8243006,,,train,sda-all,samples/GSE266244/GSM8243006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8243007,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Other,release v3,Array-seq,sequencing-based,Array-seq,,,,28907,17853,non-integer,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243007,,,train,hesrt,samples/GSE266244/GSM8243007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243008,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Other,release v3,Array-seq,sequencing-based,Array-seq,,,,26893,17992,non-integer,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243008,,,train,hesrt,samples/GSE266244/GSM8243008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243009,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Other,release v3,Array-seq,sequencing-based,Array-seq,,,,30111,18716,non-integer,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243009,,,train,hesrt,samples/GSE266244/GSM8243009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8243010,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Other,release v3,Array-seq,sequencing-based,Array-seq,,,,35691,18819,non-integer,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243010,,,train,hesrt,samples/GSE266244/GSM8243010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243011,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3055,16594,non-integer,pixel,2.2222222222222223,platform_constant,True,H&E,2.2222222222222223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243011,,,train,hesrt,samples/GSE266244/GSM8243011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8243012,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3102,16679,non-integer,pixel,2.2222222222222223,platform_constant,True,H&E,2.2222222222222223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243012,,,train,hesrt,samples/GSE266244/GSM8243012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8243013,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3747,16816,non-integer,pixel,2.2222222222222223,platform_constant,True,H&E,2.2222222222222223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243013,,,train,hesrt,samples/GSE266244/GSM8243013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243014,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,Female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3886,32285,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,39562752,,GSM8243014,,,train,sda-all,samples/GSE266244/GSM8243014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243015,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,Female,,,fresh frozen,fresh-frozen,Other,release v3,Array-seq,sequencing-based,Array-seq,,,spot,92769,15144,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,39562752,,GSM8243015,,,train,sda-all,samples/GSE266244/GSM8243015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243016,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,"Multiple Organ Types (Brain, Kidney, Liver)",primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,6 weeks,female,extracted field,Female,,,fresh frozen,fresh-frozen,Other,release v3,Array-seq,sequencing-based,Array-seq,,,spot,974016,32285,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,39562752,,GSM8243016,,,train,sda-all,samples/GSE266244/GSM8243016,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8243017,GSE266244,GSE266244,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,,aged,age rule: age in years,aged,70 years,female,extracted field,female,,,,,Other,release v3,Array-seq,sequencing-based,Array-seq,,,,750640,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243017,,,train,hesrt,samples/GSE266244/GSM8243017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8260100,GSE266518+GSE266680,GSE266518,Transcriptional and functional architecture of the whole neutrophil compartment I,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005812,influenza,disease,luna,,100 PFU of the virus strain A/PR8/34 (H1N1) were administered intra-nasally,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1635,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.164034570126449,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260100,,,val,sda-all,samples/GSE266518/GSM8260100,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8260101,GSE266518+GSE266680,GSE266518,Transcriptional and functional architecture of the whole neutrophil compartment I,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0005138,lung carcinoma,disease,luna,,intravenous injection of Lewis Lung Carcinoma (LLC),not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1724,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.173252709730219,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260101,,,val,sda-all,samples/GSE266518/GSM8260101,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.38, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8260102,GSE266518+GSE266680,GSE266518,Transcriptional and functional architecture of the whole neutrophil compartment I,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0005138,lung carcinoma,disease,luna,,intravenous injection of Lewis Lung Carcinoma (LLC),not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2070,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.168517413482142,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260102,,,val,sda-all,samples/GSE266518/GSM8260102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8260103,GSE266518+GSE266680,GSE266518,Transcriptional and functional architecture of the whole neutrophil compartment I,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2087,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.254704928498514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260103,,,val,sda-all,samples/GSE266518/GSM8260103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8252056,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,normal,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3122,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.271410437870461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252056,,,train,sda-all,samples/GSE266585/GSM8252056,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.96, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252057,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,normal,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3122,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.466661659231058,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252057,,,train,sda-all,samples/GSE266585/GSM8252057,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8252058,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3393,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.315961484721912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252058,,,train,sda-all,samples/GSE266585/GSM8252058,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252059,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,normal,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3241,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.318939717413582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252059,,,train,sda-all,samples/GSE266585/GSM8252059,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252060,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1704,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.543900539343128,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-5307b8e2e862,cross_gse_redeposit,GSM6219596,train,sda-all,samples/GSE266585/GSM8252060,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8252061,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2888,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.660776779375602,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-b9c4851f031e,cross_gse_redeposit,GSM6219595,train,sda-all,samples/GSE266585/GSM8252061,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8252062,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2432,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.533227002803857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252062,,,train,sda-all,samples/GSE266585/GSM8252062,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252063,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ECM treated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2815,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.765917101967729,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252063,,,train,sda-all,samples/GSE266585/GSM8252063,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8252064,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ECM treated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2835,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.316907336243141,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252064,,,train,sda-all,samples/GSE266585/GSM8252064,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8252065,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1945,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.806886702266913,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-4bc47558cd84,cross_gse_redeposit,GSM6219598,train,sda-all,samples/GSE266585/GSM8252065,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8252066,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2600,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.921398611224263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252066,,,train,sda-all,samples/GSE266585/GSM8252066,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8252067,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ECM treated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2291,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.759608278896929,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252067,,,train,sda-all,samples/GSE266585/GSM8252067,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8252068,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,ECM treated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2574,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.317780416543537,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252068,,,train,sda-all,samples/GSE266585/GSM8252068,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8252069,GSE266585,GSE266585,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,,,perturbation,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2099,32704,counts,um,1.0,verified,True,H&E-like (heuristic),4.535651692384362,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-300ad5df8365,cross_gse_redeposit,GSM6219597,train,sda-all,samples/GSE266585/GSM8252069,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8252339,GSE266604,GSE266604,Spatial transcriptome analysis for placental tissue of preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,normal,luna,,Normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12267,18085,counts,pixel,8.200900693238728,platform_constant,True,H&E,8.200900693238728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41604492,,GSM8252339,,,train,hesrt,samples/GSE266604/GSM8252339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8252340,GSE266604,GSE266604,Spatial transcriptome analysis for placental tissue of preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,MONDO:0005081,preeclampsia,disease,luna,Preeclampsia,Preeclampsia,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12410,18085,counts,pixel,8.40412491794964,platform_constant,True,H&E,8.40412491794964,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41604492,,GSM8252340,,,train,hesrt,samples/GSE266604/GSM8252340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.85}",,
GSM9021740,GSE266680,GSE266680,Architecture of the neutrophil compartment in mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0000170,pair of lungs,Lung,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,263684,18085,counts,um,1.0,verified,True,H&E-like (heuristic),2.4854680880158564,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM9021740,,,train,sda-all,samples/GSE266680/GSM9021740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8253800,GSE266688,GSE266688,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,203891,315,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253800,,,train,sda-all,samples/GSE266688/GSM8253800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8253801,GSE266688,GSE266688,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,193744,315,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253801,,,train,sda-all,samples/GSE266688/GSM8253801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8253802,GSE266688,GSE266688,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,,primary tissue,,,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,265455,315,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253802,,,train,sda-all,samples/GSE266688/GSM8253802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8253803,GSE266688,GSE266688,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,,primary tissue,,,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,95624,315,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253803,,,train,sda-all,samples/GSE266688/GSM8253803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8253804,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,normal,luna,,control,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,118939,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999963510752165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253804,,,train,sda-all,samples/GSE266689/GSM8253804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8253805,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,normal,luna,,control,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,111183,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999939169789284,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253805,,,train,sda-all,samples/GSE266689/GSM8253805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8253806,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,cuprizone-rapamycin,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,127215,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948328424534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253806,,,train,sda-all,samples/GSE266689/GSM8253806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8253807,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,cuprizone-rapamycin,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,120337,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999173143707626,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253807,,,train,sda-all,samples/GSE266689/GSM8253807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 0.99}",,
GSM8647384,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,normal,luna,,,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,116173,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999993908975733,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647384,,,train,sda-all,samples/GSE266689/GSM8647384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647385,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,normal,luna,,,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,116358,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097456388266,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647385,,,train,sda-all,samples/GSE266689/GSM8647385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647386,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,normal,luna,,,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,110739,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097059737032,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647386,,,train,sda-all,samples/GSE266689/GSM8647386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8647387,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,cuprizone-rapamycin,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,135899,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647387,,,train,sda-all,samples/GSE266689/GSM8647387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8647388,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,cuprizone-rapamycin,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,122729,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000096519772764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647388,,,train,sda-all,samples/GSE266689/GSM8647388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647389,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,disease,luna,,cuprizone-rapamycin,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,159849,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500009697439876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647389,,,train,sda-all,samples/GSE266689/GSM8647389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8647390,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,BSA infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,133619,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999517268012794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647390,,,train,sda-all,samples/GSE266689/GSM8647390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8647391,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,BSA infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,123765,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499998620917917,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647391,,,train,sda-all,samples/GSE266689/GSM8647391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8647392,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,BSA infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,121071,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000110344827586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647392,,,train,sda-all,samples/GSE266689/GSM8647392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647393,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,BSA infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,121843,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000036907995749,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647393,,,train,sda-all,samples/GSE266689/GSM8647393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647394,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,BSA infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,120877,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000096519772764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647394,,,train,sda-all,samples/GSE266689/GSM8647394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8647395,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,BSA infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,125103,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000055151114052,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647395,,,train,sda-all,samples/GSE266689/GSM8647395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647396,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,OSM infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,152129,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097059737032,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647396,,,train,sda-all,samples/GSE266689/GSM8647396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647397,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,OSM infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,144934,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917236813065,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647397,,,train,sda-all,samples/GSE266689/GSM8647397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8647398,GSE266689,GSE266689,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,brain,primary tissue,,,perturbation,luna,,OSM infused,adult,luna,adult,adult,mixed,extracted field,M/F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,139480,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999875862068965,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647398,,,train,sda-all,samples/GSE266689/GSM8647398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257561,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,juvenile,luna,juvenile,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,78110,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000116219008265,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257561,,,train,sda-all,samples/GSE266969/GSM8257561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8257562,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32377,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000307566126717,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257562,,,train,sda-all,samples/GSE266969/GSM8257562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8257563,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37985,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000129172264132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257563,,,train,sda-all,samples/GSE266969/GSM8257563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM8257564,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,juvenile,luna,juvenile,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23109,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000167785234899,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257564,,,train,sda-all,samples/GSE266969/GSM8257564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8257565,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,98705,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500010350742296,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257565,,,train,sda-all,samples/GSE266969/GSM8257565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8257566,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38244,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998798076923084,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257566,,,train,sda-all,samples/GSE266969/GSM8257566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8257567,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,91954,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025815778604,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257567,,,train,sda-all,samples/GSE266969/GSM8257567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8257568,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83416,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862372694742,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257568,,,train,sda-all,samples/GSE266969/GSM8257568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257569,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60974,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257569,,,train,sda-all,samples/GSE266969/GSM8257569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257570,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,112292,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999827839500504,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257570,,,train,sda-all,samples/GSE266969/GSM8257570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257571,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,124619,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012903891814,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257571,,,train,sda-all,samples/GSE266969/GSM8257571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257572,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,39076,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000236155390246,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257572,,,train,sda-all,samples/GSE266969/GSM8257572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257573,GSE266969,GSE266969,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,Glioblastoma,Ntva-INK4a_ARF−/−,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,134142,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998709477596526,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257573,,,train,sda-all,samples/GSE266969/GSM8257573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263823,GSE267315,GSE267315,Spatial transcriptomic characteristics of the aging human ovary,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,juvenile,age rule: bare number read as years,juvenile,12,unknown,not stated,,,,,,Stereo-seq,release v3,scStereo-seq,sequencing-based,scStereo-seq,,,bin,78790,29825,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263823,,,train,sda-all,samples/GSE267315/GSM8263823,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263824,GSE267315,GSE267315,Spatial transcriptomic characteristics of the aging human ovary,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,32,unknown,not stated,,,,,,Stereo-seq,release v3,scStereo-seq,sequencing-based,scStereo-seq,,,bin,61577,31922,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263824,,,train,sda-all,samples/GSE267315/GSM8263824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263825,GSE267315,GSE267315,Spatial transcriptomic characteristics of the aging human ovary,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,34,unknown,not stated,,,,,,Stereo-seq,release v3,scStereo-seq,sequencing-based,scStereo-seq,,,bin,50340,31016,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263825,,,train,sda-all,samples/GSE267315/GSM8263825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263826,GSE267315,GSE267315,Spatial transcriptomic characteristics of the aging human ovary,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,42,unknown,not stated,,,,,,Stereo-seq,release v3,scStereo-seq,sequencing-based,scStereo-seq,,,bin,91519,33245,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263826,,,train,sda-all,samples/GSE267315/GSM8263826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8265211,GSE267401,GSE267401,Spatial transcriptomics of colorectal cancer tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,primary tissue,not stated,luna,not stated,,unknown,not stated,,GSE267401:21,21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4690,37082,counts,pixel,10.243201685526548,platform_constant,True,H&E,10.243201685526548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265211,,,train,hesrt,samples/GSE267401/GSM8265211,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.63, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8265212,GSE267401,GSE267401,Spatial transcriptomics of colorectal cancer tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer,metastasis,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,metastasis tissue,not stated,luna,not stated,,unknown,not stated,,GSE267401:21,21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3884,37082,counts,pixel,11.173462403761958,platform_constant,True,H&E,11.173462403761958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265212,,,train,hesrt,samples/GSE267401/GSM8265212,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8265213,GSE267401,GSE267401,Spatial transcriptomics of colorectal cancer tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,primary tissue,not stated,luna,not stated,,unknown,not stated,,GSE267401:17,17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3721,37082,counts,pixel,11.17346240376202,platform_constant,True,H&E,11.17346240376202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265213,,,train,hesrt,samples/GSE267401/GSM8265213,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 0.56, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8265214,GSE267401,GSE267401,Spatial transcriptomics of colorectal cancer tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer,metastasis,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,metastasis tissue,not stated,luna,not stated,,unknown,not stated,,GSE267401:17,17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4757,37082,counts,pixel,9.079342695409164,platform_constant,True,H&E,9.079342695409164,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265214,,,train,hesrt,samples/GSE267401/GSM8265214,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.71, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8268371,GSE267534,GSE267534,TLR4-dependent fibroblast-monocyte axis in tumor-draining lymph nodes contributes to metastasis in triple-negative breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001097,axillary lymph node,Lymph node (axillary),primary tissue,,,normal,luna,,Control (naïve),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,809,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.329489421081613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain / fluorescence should be stated,40957419,,GSM8268371,,,train,sda-all,samples/GSE267534/GSM8268371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8268372,GSE267534,GSE267534,TLR4-dependent fibroblast-monocyte axis in tumor-draining lymph nodes contributes to metastasis in triple-negative breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001097,axillary lymph node,Lymph node (axillary),primary tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,Tumor mice 67NR,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1954,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.306185796326132,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain / fluorescence should be stated,40957419,,GSM8268372,,,train,sda-all,samples/GSE267534/GSM8268372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8268373,GSE267534,GSE267534,TLR4-dependent fibroblast-monocyte axis in tumor-draining lymph nodes contributes to metastasis in triple-negative breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001097,axillary lymph node,Lymph node (axillary),primary tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,Tumor mice 4T1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1652,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.271101254152593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain / fluorescence should be stated,40957419,,GSM8268373,,,train,sda-all,samples/GSE267534/GSM8268373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8279107,GSE267806,GSE267806,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Desmoplastic Small Round Cell Tumor,tumour tissue,MONDO:0019373,desmoplastic small round cell tumor,disease,luna,Desmoplastic Small Round Cell Tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4240,17943,counts,pixel,3.9622128599461375,platform_constant,True,H&E,3.9622128599461375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279107,,,train,hesrt,samples/GSE267806/GSM8279107,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8279108,GSE267806,GSE267806,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Desmoplastic Small Round Cell Tumor,tumour tissue,MONDO:0019373,desmoplastic small round cell tumor,disease,luna,Desmoplastic Small Round Cell Tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3452,17943,counts,pixel,3.9974448514766765,platform_constant,True,H&E,3.9974448514766765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279108,,,train,hesrt,samples/GSE267806/GSM8279108,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8279109,GSE267806,GSE267806,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Desmoplastic Small Round Cell Tumor,tumour tissue,MONDO:0019373,desmoplastic small round cell tumor,disease,luna,Desmoplastic Small Round Cell Tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3583,17943,counts,pixel,4.0917422324035275,platform_constant,True,H&E,4.0917422324035275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279109,,,train,hesrt,samples/GSE267806/GSM8279109,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8279110,GSE267806,GSE267806,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Desmoplastic Small Round Cell Tumor,tumour tissue,MONDO:0019373,desmoplastic small round cell tumor,disease,luna,Desmoplastic Small Round Cell Tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3537,17943,counts,pixel,4.06203675876404,platform_constant,True,H&E,4.06203675876404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279110,,,train,hesrt,samples/GSE267806/GSM8279110,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8279111,GSE267806,GSE267806,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Desmoplastic Small Round Cell Tumor,tumour tissue,MONDO:0019373,desmoplastic small round cell tumor,disease,luna,Desmoplastic Small Round Cell Tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3215,17943,counts,pixel,4.053448175843248,platform_constant,True,H&E,4.053448175843248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279111,,,train,hesrt,samples/GSE267806/GSM8279111,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8279112,GSE267806,GSE267806,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Desmoplastic Small Round Cell Tumor,tumour tissue,MONDO:0019373,desmoplastic small round cell tumor,disease,luna,Desmoplastic Small Round Cell Tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3697,17943,counts,pixel,4.301034700347972,platform_constant,True,H&E,4.301034700347972,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279112,,,train,hesrt,samples/GSE267806/GSM8279112,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8281384,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4475,32285,counts,pixel,4.005576749644748,platform_constant,True,H&E,4.005576749644748,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281384,,,train,hesrt,samples/GSE267904/GSM8281384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8281385,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3906,32285,counts,pixel,4.031267449596859,platform_constant,True,H&E,4.031267449596859,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281385,,,train,hesrt,samples/GSE267904/GSM8281385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8281386,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4521,32285,counts,pixel,4.087681730064042,platform_constant,True,H&E,4.087681730064042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281386,,,train,hesrt,samples/GSE267904/GSM8281386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8281387,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3609,32285,counts,pixel,4.115053249433274,platform_constant,True,H&E,4.115053249433274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281387,,,train,hesrt,samples/GSE267904/GSM8281387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8281388,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3875,32285,counts,pixel,4.07115099887133,platform_constant,True,H&E,4.07115099887133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281388,,,train,hesrt,samples/GSE267904/GSM8281388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281389,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4104,32285,counts,pixel,4.094265730366453,platform_constant,True,H&E,4.094265730366453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281389,,,train,hesrt,samples/GSE267904/GSM8281389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8281390,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4050,32285,counts,pixel,4.098691971774496,platform_constant,True,H&E,4.098691971774496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281390,,,train,hesrt,samples/GSE267904/GSM8281390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281391,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4166,32285,counts,pixel,4.069575883406268,platform_constant,True,H&E,4.069575883406268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281391,,,train,hesrt,samples/GSE267904/GSM8281391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281392,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3831,32285,counts,pixel,3.9941703975375105,platform_constant,True,H&E,3.9941703975375105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281392,,,train,hesrt,samples/GSE267904/GSM8281392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8281393,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4444,32285,counts,pixel,4.006204793980877,platform_constant,True,H&E,4.006204793980877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281393,,,train,hesrt,samples/GSE267904/GSM8281393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281394,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3881,32285,counts,pixel,4.033026602886546,platform_constant,True,H&E,4.033026602886546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281394,,,train,hesrt,samples/GSE267904/GSM8281394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281395,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3931,32285,counts,pixel,4.031603548868118,platform_constant,True,H&E,4.031603548868118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281395,,,train,hesrt,samples/GSE267904/GSM8281395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281396,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4479,32285,counts,pixel,4.030262280128959,platform_constant,True,H&E,4.030262280128959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281396,,,train,hesrt,samples/GSE267904/GSM8281396,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.29}",disease_status;life_stage,low_confidence_annotation
GSM8281397,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3514,32285,counts,pixel,4.0352884163574,platform_constant,True,H&E,4.0352884163574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281397,,,train,hesrt,samples/GSE267904/GSM8281397,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8281398,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4378,32285,counts,pixel,4.031770093011953,platform_constant,True,H&E,4.031770093011953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281398,,,train,hesrt,samples/GSE267904/GSM8281398,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8281399,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4108,32285,counts,pixel,4.041571145277497,platform_constant,True,H&E,4.041571145277497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281399,,,train,hesrt,samples/GSE267904/GSM8281399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8281400,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4197,32285,counts,pixel,4.138325579224917,platform_constant,True,H&E,4.138325579224917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281400,,,train,hesrt,samples/GSE267904/GSM8281400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8281401,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4117,32285,counts,pixel,4.063183713379932,platform_constant,True,H&E,4.063183713379932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281401,,,train,hesrt,samples/GSE267904/GSM8281401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8281402,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3046,32285,counts,pixel,4.0571522889538505,platform_constant,True,H&E,4.0571522889538505,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281402,,,train,hesrt,samples/GSE267904/GSM8281402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8281403,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3496,32285,counts,pixel,4.06001999496172,platform_constant,True,H&E,4.06001999496172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281403,,,train,hesrt,samples/GSE267904/GSM8281403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM8281404,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4326,32285,counts,pixel,4.014680844062496,platform_constant,True,H&E,4.014680844062496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281404,,,train,hesrt,samples/GSE267904/GSM8281404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM8281405,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2957,32285,counts,pixel,4.1300987039365005,platform_constant,True,H&E,4.1300987039365005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281405,,,train,hesrt,samples/GSE267904/GSM8281405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM8281406,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3643,32285,counts,pixel,4.124000999160059,platform_constant,True,H&E,4.124000999160059,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281406,,,train,hesrt,samples/GSE267904/GSM8281406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8281407,GSE267904,GSE267904,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,Bleomycin,not stated,luna,not stated,8 weeks + 5 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4136,32285,counts,pixel,4.079094342828535,platform_constant,True,H&E,4.079094342828535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281407,,,train,hesrt,samples/GSE267904/GSM8281407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM8282531,GSE267960,GSE267960,Spatial transcriptome profile of EGFR-TKI resistant non-small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Lung cancer,Osimertinib resistant,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4886,18085,counts,pixel,6.70150567926141,platform_constant,True,H&E,6.70150567926141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40843133,,GSM8282531,,,train,hesrt,samples/GSE267960/GSM8282531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8282532,GSE267960,GSE267960,Spatial transcriptome profile of EGFR-TKI resistant non-small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Lung cancer,Osimertinib resistant,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4518,18085,counts,pixel,4.831860356729648,platform_constant,True,H&E,4.831860356729648,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40843133,,GSM8282532,,,train,hesrt,samples/GSE267960/GSM8282532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8283897,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4048,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.202588970146706,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283897,,,train,sda-all,samples/GSE268014/GSM8283897,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283898,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4096,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.136999964749101,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283898,,,train,sda-all,samples/GSE268014/GSM8283898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283899,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3333,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.110902711251165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283899,,,train,sda-all,samples/GSE268014/GSM8283899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283900,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4128,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.224056325718585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283900,,,train,sda-all,samples/GSE268014/GSM8283900,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283901,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3606,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.359943033394903,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283901,,,train,sda-all,samples/GSE268014/GSM8283901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283902,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2685,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.051652192352865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283902,,,train,sda-all,samples/GSE268014/GSM8283902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283903,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2978,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.141943666607662,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283903,,,train,sda-all,samples/GSE268014/GSM8283903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283904,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4908,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.350514188432381,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283904,,,train,sda-all,samples/GSE268014/GSM8283904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283905,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4054,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.331721753687592,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283905,,,train,sda-all,samples/GSE268014/GSM8283905,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283906,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3416,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.492171207803419,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283906,,,train,sda-all,samples/GSE268014/GSM8283906,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283907,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3371,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.526127910334503,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283907,,,train,sda-all,samples/GSE268014/GSM8283907,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283908,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3137,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.24839878333888,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283908,,,train,sda-all,samples/GSE268014/GSM8283908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283909,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3676,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.201423305768077,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283909,,,train,sda-all,samples/GSE268014/GSM8283909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283910,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4541,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.361009552284944,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283910,,,train,sda-all,samples/GSE268014/GSM8283910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283911,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2263,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.336324878158438,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283911,,,train,sda-all,samples/GSE268014/GSM8283911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283912,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4423,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.386677992451901,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283912,,,train,sda-all,samples/GSE268014/GSM8283912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283913,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3632,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.0692674143063545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283913,,,train,sda-all,samples/GSE268014/GSM8283913,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283914,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3440,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.4937800136787205,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283914,,,train,sda-all,samples/GSE268014/GSM8283914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283915,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3467,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.15493491430915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283915,,,train,sda-all,samples/GSE268014/GSM8283915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283916,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1057,36634,counts,um,1.0,verified,True,H&E-like (heuristic),4.487668094598339,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283916,,,train,sda-all,samples/GSE268014/GSM8283916,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283917,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3050,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.4381567412979885,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283917,,,train,sda-all,samples/GSE268014/GSM8283917,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283918,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1351,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.593705512672028,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283918,,,train,sda-all,samples/GSE268014/GSM8283918,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283919,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3213,33538,counts,um,1.0,verified,True,H&E-like (heuristic),5.133714446309122,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283919,,,train,sda-all,samples/GSE268014/GSM8283919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283920,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3816,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.33283413782567,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283920,,,train,sda-all,samples/GSE268014/GSM8283920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283921,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2882,33538,counts,um,1.0,verified,True,H&E-like (heuristic),4.320122703561482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283921,,,train,sda-all,samples/GSE268014/GSM8283921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8348695,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,533,36601,counts,um,1.0,verified,True,H&E,7.29043321628233,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8348695,,,train,sda-all,samples/GSE268014/GSM8348695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM9701483,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,169359,18085,counts,um,1.0,verified,True,H&E,4.037573106425636,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM9701483,,,train,sda-all,samples/GSE268014/GSM9701483,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9701484,GSE268014,GSE268014,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck mucosal squamous cell carcinoma,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,166335,18085,counts,um,1.0,verified,True,H&E,3.350706343751767,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM9701484,,,train,sda-all,samples/GSE268014/GSM9701484,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283927,GSE268015,GSE268015,Spatial transcriptome analysis of lung squamous cell carcinoma arising from interstitial pneumonia provides insights into tumor heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005097;MONDO:0005249,squamous cell lung carcinoma;pneumonia,disease,luna,squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2104,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.352029578887781,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39756106,,GSM8283927,,,train,sda-all,samples/GSE268015/GSM8283927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8283929,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23270,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283929,,,train,sda-all,samples/GSE268018/GSM8283929,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM8283930,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22307,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283930,,,train,sda-all,samples/GSE268018/GSM8283930,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM8283931,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,27014,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283931,,,train,sda-all,samples/GSE268018/GSM8283931,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8283932,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23434,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283932,,,train,sda-all,samples/GSE268018/GSM8283932,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8283933,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21564,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283933,,,train,sda-all,samples/GSE268018/GSM8283933,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM8283934,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21406,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283934,,,train,sda-all,samples/GSE268018/GSM8283934,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8283935,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23629,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283935,,,train,sda-all,samples/GSE268018/GSM8283935,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.91}",,
GSM8283936,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,26506,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283936,,,train,sda-all,samples/GSE268018/GSM8283936,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.91}",,
GSM8283937,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22951,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283937,,,train,sda-all,samples/GSE268018/GSM8283937,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM8283938,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,20831,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283938,,,train,sda-all,samples/GSE268018/GSM8283938,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8283939,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23079,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283939,,,train,sda-all,samples/GSE268018/GSM8283939,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8283940,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,26583,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283940,,,train,sda-all,samples/GSE268018/GSM8283940,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8283941,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21410,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283941,,,train,sda-all,samples/GSE268018/GSM8283941,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8283942,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23047,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283942,,,train,sda-all,samples/GSE268018/GSM8283942,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8283943,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23314,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283943,,,train,sda-all,samples/GSE268018/GSM8283943,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8283944,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,20757,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283944,,,train,sda-all,samples/GSE268018/GSM8283944,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8283945,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21638,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283945,,,train,sda-all,samples/GSE268018/GSM8283945,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM8283946,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21701,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283946,,,train,sda-all,samples/GSE268018/GSM8283946,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM8283947,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,25108,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283947,,,train,sda-all,samples/GSE268018/GSM8283947,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8283948,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23583,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283948,,,train,sda-all,samples/GSE268018/GSM8283948,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8283949,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23329,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283949,,,train,sda-all,samples/GSE268018/GSM8283949,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8283950,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21671,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283950,,,train,sda-all,samples/GSE268018/GSM8283950,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8283951,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23516,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283951,,,train,sda-all,samples/GSE268018/GSM8283951,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8283952,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23027,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283952,,,train,sda-all,samples/GSE268018/GSM8283952,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8283953,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23304,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283953,,,train,sda-all,samples/GSE268018/GSM8283953,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM8283954,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21648,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283954,,,train,sda-all,samples/GSE268018/GSM8283954,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM8283955,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22456,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283955,,,train,sda-all,samples/GSE268018/GSM8283955,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8283956,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22092,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283956,,,train,sda-all,samples/GSE268018/GSM8283956,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8283957,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,19032,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283957,,,train,sda-all,samples/GSE268018/GSM8283957,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8283958,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21649,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283958,,,train,sda-all,samples/GSE268018/GSM8283958,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8283959,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,23603,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283959,,,train,sda-all,samples/GSE268018/GSM8283959,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM8283960,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22599,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283960,,,train,sda-all,samples/GSE268018/GSM8283960,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM8283961,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21013,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283961,,,train,sda-all,samples/GSE268018/GSM8283961,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM8283962,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,20376,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283962,,,train,sda-all,samples/GSE268018/GSM8283962,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM8283963,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,21417,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283963,,,train,sda-all,samples/GSE268018/GSM8283963,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8283964,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,20967,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283964,,,train,sda-all,samples/GSE268018/GSM8283964,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8283965,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22477,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283965,,,train,sda-all,samples/GSE268018/GSM8283965,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8283966,GSE268018,GSE268018,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),Mus musculus,10090,house mouse,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,1934,22202,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39160174,,GSM8283966,,,train,sda-all,samples/GSE268018/GSM8283966,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8284978,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,659,37733,counts,pixel,4.179591922332745,platform_constant,True,H&E,4.179591922332745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284978,,,train,hesrt,samples/GSE268049/GSM8284978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284979,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,490,37733,counts,pixel,4.179591922332745,platform_constant,True,H&E,4.179591922332745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284979,,,train,hesrt,samples/GSE268049/GSM8284979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284980,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,661,37733,counts,pixel,4.179591922332725,platform_constant,True,H&E,4.179591922332725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284980,,,train,hesrt,samples/GSE268049/GSM8284980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284981,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,509,37733,counts,pixel,4.179591922332745,platform_constant,True,H&E,4.179591922332745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284981,,,train,hesrt,samples/GSE268049/GSM8284981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284982,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,748,37733,counts,pixel,4.138218356474405,platform_constant,True,H&E,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284982,,,train,hesrt,samples/GSE268049/GSM8284982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284983,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,427,37733,counts,pixel,4.138218356474405,platform_constant,True,H&E,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284983,,,train,hesrt,samples/GSE268049/GSM8284983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284984,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,967,37733,counts,pixel,4.138218356474405,platform_constant,True,H&E,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284984,,,train,hesrt,samples/GSE268049/GSM8284984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284985,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,278,37733,counts,pixel,4.138218356474405,platform_constant,True,H&E,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284985,,,train,hesrt,samples/GSE268049/GSM8284985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284986,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,731,37733,counts,pixel,4.138218356474405,platform_constant,True,H&E,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284986,,,train,hesrt,samples/GSE268049/GSM8284986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8284987,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,804,37733,counts,pixel,4.137373822107152,platform_constant,True,H&E,4.137373822107152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284987,,,train,hesrt,samples/GSE268049/GSM8284987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284988,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,315,37733,counts,pixel,4.137373822107152,platform_constant,True,H&E,4.137373822107152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284988,,,train,hesrt,samples/GSE268049/GSM8284988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8284989,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,605,37733,counts,pixel,4.027121283976648,platform_constant,True,H&E,4.027121283976648,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284989,,,train,hesrt,samples/GSE268049/GSM8284989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284990,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,636,37733,counts,pixel,4.055246865356935,platform_constant,True,H&E,4.055246865356935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284990,,,train,hesrt,samples/GSE268049/GSM8284990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284991,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,537,37733,counts,pixel,4.055246865356935,platform_constant,True,H&E,4.055246865356935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284991,,,train,hesrt,samples/GSE268049/GSM8284991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284992,GSE268049,GSE268049,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tumor,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,lung adenocarcinoma,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1157,37733,counts,pixel,4.055246865356935,platform_constant,True,H&E,4.055246865356935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284992,,,train,hesrt,samples/GSE268049/GSM8284992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8285399,GSE268068,GSE268068,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected and control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2902,60646,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285399,,,train,hesrt,samples/GSE268068/GSM8285399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8285400,GSE268068,GSE268068,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected and control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2693,60646,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285400,,,train,hesrt,samples/GSE268068/GSM8285400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8285401,GSE268068,GSE268068,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected and control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2999,60646,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285401,,,train,hesrt,samples/GSE268068/GSM8285401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8285402,GSE268068,GSE268068,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,infected and control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2676,60646,counts,pixel,4.141824546650327,platform_constant,True,H&E,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285402,,,train,hesrt,samples/GSE268068/GSM8285402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289548,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3446,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.0384562901986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289548,,,train,sda-all,samples/GSE268312/GSM8289548,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM8289549,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3080,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.037811307901734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289549,,,train,sda-all,samples/GSE268312/GSM8289549,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289550,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3152,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.0240193794868615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289550,,,train,sda-all,samples/GSE268312/GSM8289550,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8289551,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2907,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.022676160445223,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289551,,,train,sda-all,samples/GSE268312/GSM8289551,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8289552,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2991,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.986661333911779,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289552,,,train,sda-all,samples/GSE268312/GSM8289552,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289553,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2563,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.92133822598847,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289553,,,train,sda-all,samples/GSE268312/GSM8289553,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289554,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3461,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.09295384059742,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289554,,,train,sda-all,samples/GSE268312/GSM8289554,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289555,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3670,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.0944936743951414,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289555,,,train,sda-all,samples/GSE268312/GSM8289555,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289556,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4043,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.880142847860696,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289556,,,train,sda-all,samples/GSE268312/GSM8289556,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289557,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3973,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.01898030954403,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289557,,,train,sda-all,samples/GSE268312/GSM8289557,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8289558,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3137,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.110725302303756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289558,,,train,sda-all,samples/GSE268312/GSM8289558,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289559,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2839,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.11203517045289,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289559,,,train,sda-all,samples/GSE268312/GSM8289559,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289560,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2789,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9274236364735726,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289560,,,train,sda-all,samples/GSE268312/GSM8289560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289561,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3633,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9616194607097874,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289561,,,train,sda-all,samples/GSE268312/GSM8289561,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289562,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2695,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9160169941909313,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289562,,,train,sda-all,samples/GSE268312/GSM8289562,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289563,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3516,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9165007623954353,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289563,,,train,sda-all,samples/GSE268312/GSM8289563,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289564,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3261,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.916405626523529,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289564,,,train,sda-all,samples/GSE268312/GSM8289564,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289565,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3364,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.915008513292004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289565,,,train,sda-all,samples/GSE268312/GSM8289565,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289566,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3515,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9995996217750003,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289566,,,train,sda-all,samples/GSE268312/GSM8289566,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289567,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3641,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9753775841130916,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289567,,,train,sda-all,samples/GSE268312/GSM8289567,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289568,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4126,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.92916736123975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289568,,,train,sda-all,samples/GSE268312/GSM8289568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8289569,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3510,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.97596015379836,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289569,,,train,sda-all,samples/GSE268312/GSM8289569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8764276,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3511,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.913264070524145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764276,,,train,sda-all,samples/GSE268312/GSM8764276,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8764277,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3291,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9156806735119645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764277,,,train,sda-all,samples/GSE268312/GSM8764277,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8764278,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4181,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9039653352658843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764278,,,train,sda-all,samples/GSE268312/GSM8764278,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8764279,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3845,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.91900502829734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764279,,,train,sda-all,samples/GSE268312/GSM8764279,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8764280,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3329,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9004454034411076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764280,,,train,sda-all,samples/GSE268312/GSM8764280,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8764281,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2509,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9032682091849704,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764281,,,train,sda-all,samples/GSE268312/GSM8764281,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8764282,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3287,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.902184198336741,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764282,,,train,sda-all,samples/GSE268312/GSM8764282,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8764283,GSE268312,GSE268312,Spatial transcriptomics analysis of a panel of PDX models of GBM,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,brain,luna,UBERON:0000955,brain,Brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3770,68886,counts,um,1.0,verified,True,H&E-like (heuristic),3.9002792301916815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764283,,,train,sda-all,samples/GSE268312/GSM8764283,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8291069,GSE268427,GSE268427,snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Breast cancer liver metastasis,metastasis,MONDO:1060295;MONDO:1060297,metastatic breast cancer in the liver;metastatic malignant neoplasm in the liver,disease,luna,breast cancer,Luminal liver metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2848,18085,counts,pixel,0.6493369596450738,platform_constant,True,H&E,0.6493369596450738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414943,10.1101/2023.12.07.570700,GSM8291069,,,test,hesrt,samples/GSE268427/GSM8291069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291070,GSE268427,GSE268427,snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary human breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,breast cancer,HER2 amplified primary breast cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4955,18085,counts,pixel,0.6454837769292928,platform_constant,True,H&E,0.6454837769292928,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414943,10.1101/2023.12.07.570700,GSM8291070,,,test,hesrt,samples/GSE268427/GSM8291070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291071,GSE268427,GSE268427,snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Breast cancer liver metastasis,metastasis,MONDO:1060295;MONDO:1060297;MONDO:0005494,metastatic breast cancer in the liver;metastatic malignant neoplasm in the liver;triple-negative breast carcinoma,disease,luna,breast cancer,TNBC liver metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,0.6454837769292928,platform_constant,True,H&E,0.6454837769292928,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414943,10.1101/2023.12.07.570700,GSM8291071,,,test,hesrt,samples/GSE268427/GSM8291071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291962,GSE268492,GSE268492,Senescent-like microglia limit remyelination through the senescence associated secretory phenotype,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,Spinal Cord,primary tissue,,,disease,luna,,LPC focal demyelination,adult,age rule: age with unit,adult,3 months,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,24113,462,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,40055369,,GSM8291962,,,train,sda-all,samples/GSE268492/GSM8291962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291963,GSE268492,GSE268492,Senescent-like microglia limit remyelination through the senescence associated secretory phenotype,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,Spinal Cord,primary tissue,,,disease,luna,,LPC focal demyelination,aged,age rule: age with unit,aged,18 months,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,10999,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40055369,,GSM8291963,,,train,sda-all,samples/GSE268492/GSM8291963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292463,GSE268523,GSE268523,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,MONDO:0009258,classic galactosemia,disease,luna,classic galactosemia,CG,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2828,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-835cd744f002,cross_gse_redeposit,GSM9241518,train,hesrt,samples/GSE268523/GSM8292463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292464,GSE268523,GSE268523,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,MONDO:0009258,classic galactosemia,disease,luna,classic galactosemia,CG,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2000,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-125efab9f9b2,cross_gse_redeposit,GSM9241519,train,hesrt,samples/GSE268523/GSM8292464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292465,GSE268523,GSE268523,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,MONDO:0009258,classic galactosemia,disease,luna,classic galactosemia,CG,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1225,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-2cf57dbd8a98,cross_gse_redeposit,GSM9241520,train,hesrt,samples/GSE268523/GSM8292465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292466,GSE268523,GSE268523,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,MONDO:0005089,sarcoma,disease,luna,Ewing sarcoma,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,946,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,GSM8292466,,,train,hesrt,samples/GSE268523/GSM8292466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.27, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8292467,GSE268523,GSE268523,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,Dock9 deficiency,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5067,18085,counts,pixel,7.142856785714368,platform_constant,True,H&E,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,GSM8292467,,,train,hesrt,samples/GSE268523/GSM8292467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8292468,GSE268523,GSE268523,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,medulloblastoma,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1739,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-01e98b2b16a7,cross_gse_redeposit,GSM9241522,train,hesrt,samples/GSE268523/GSM8292468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8294434,GSE268577,GSE268577,Spatial transcriptomics of 3 H3.3K27M pDMG samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Midline,tumour tissue,MONDO:0021042,glioma,disease,luna,Diffusion Midline Glioma (DMG),H3.3 K27M,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,577,17943,counts,pixel,4.030263032311737,platform_constant,True,H&E,4.030263032311737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39373720,10.7554/elife.91313.3,GSM8294434,,,train,hesrt,samples/GSE268577/GSM8294434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8294435,GSE268577,GSE268577,Spatial transcriptomics of 3 H3.3K27M pDMG samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Midline,tumour tissue,MONDO:0021042,glioma,disease,luna,Diffusion Midline Glioma (DMG),H3.3 K27M,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,856,17943,counts,pixel,4.032895034268122,platform_constant,True,H&E,4.032895034268122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39373720,10.7554/elife.91313.3,GSM8294435,,,train,hesrt,samples/GSE268577/GSM8294435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8294436,GSE268577,GSE268577,Spatial transcriptomics of 3 H3.3K27M pDMG samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Midline,tumour tissue,MONDO:0021042,glioma,disease,luna,Diffusion Midline Glioma (DMG),H3.3 K27M,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,217,17943,counts,pixel,3.936842092665259,platform_constant,True,H&E,3.936842092665259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39373720,10.7554/elife.91313.3,GSM8294436,,,train,hesrt,samples/GSE268577/GSM8294436,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8299015,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797;MONDO:0043975,spinal cord injury;autonomic dysreflexia,disease,mondo_predicate (Luna: perturbation),,"Spinal cord injury, subjected to autonomic dysreflexia",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3746,32285,counts,pixel,3.943705260611831,platform_constant,True,H&E,3.943705260611831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299015,,,train,hesrt,samples/GSE268779/GSM8299015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299016,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797;MONDO:0043975,spinal cord injury;autonomic dysreflexia,disease,mondo_predicate (Luna: perturbation),,"Spinal cord injury, subjected to autonomic dysreflexia",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4243,32285,counts,pixel,3.8869514222785115,platform_constant,True,H&E,3.8869514222785115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299016,,,train,hesrt,samples/GSE268779/GSM8299016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8299017,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797;MONDO:0043975,spinal cord injury;autonomic dysreflexia,disease,luna,,"Spinal cord injury, subjected to autonomic dysreflexia",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3842,32285,counts,pixel,3.965889055538643,platform_constant,True,H&E,3.965889055538643,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299017,,,train,hesrt,samples/GSE268779/GSM8299017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299018,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,Spinal cord injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3985,32285,counts,pixel,3.9503181338774565,platform_constant,True,H&E,3.9503181338774565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299018,,,train,hesrt,samples/GSE268779/GSM8299018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299019,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,Spinal cord injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3291,32285,counts,pixel,3.9640658728068594,platform_constant,True,H&E,3.9640658728068594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299019,,,train,hesrt,samples/GSE268779/GSM8299019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299020,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,mondo_predicate (Luna: perturbation),,Spinal cord injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3578,32285,counts,pixel,3.9814246036086542,platform_constant,True,H&E,3.9814246036086542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299020,,,train,hesrt,samples/GSE268779/GSM8299020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299021,GSE268779,GSE268779,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0043797;MONDO:0043975,spinal cord injury;autonomic dysreflexia,disease,mondo_predicate (Luna: perturbation),,"Spinal cord injury, subjected to autonomic dysreflexia",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2448,32285,counts,pixel,3.9749923646678087,platform_constant,True,H&E,3.9749923646678087,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299021,,,train,hesrt,samples/GSE268779/GSM8299021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8301085,GSE268847,GSE268847,Implant renal injury-responsive cells to supplement erythropoietin and protect kidney [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3025,55450,counts,um,1.0,verified,True,H&E-like (heuristic),4.04941225826671,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41179707,,GSM8301085,,,train,sda-all,samples/GSE268847/GSM8301085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8301086,GSE268847,GSE268847,Implant renal injury-responsive cells to supplement erythropoietin and protect kidney [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2823,61692,counts,um,1.0,verified,True,H&E-like (heuristic),4.043487882863929,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41179707,,GSM8301086,,,train,sda-all,samples/GSE268847/GSM8301086,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.47000000000000003, ""uberon"": 0.96, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8305455,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,912,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.194609930399362,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305455,,,train,sda-all,samples/GSE269043/GSM8305455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305456,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,938,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.273557750382263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305456,,,train,sda-all,samples/GSE269043/GSM8305456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305457,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1279,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.143947553900407,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305457,,,train,sda-all,samples/GSE269043/GSM8305457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.16, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305458,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,581,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.19249997934899,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305458,,,train,sda-all,samples/GSE269043/GSM8305458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305459,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,474,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.178049636293641,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305459,,,train,sda-all,samples/GSE269043/GSM8305459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305460,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1839,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.108255471479863,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305460,,,train,sda-all,samples/GSE269043/GSM8305460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.13, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305461,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2208,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.296015375569938,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305461,,,train,sda-all,samples/GSE269043/GSM8305461,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305462,GSE269043+GSE269045,GSE269043,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1794,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.202606006506583,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305462,,,train,sda-all,samples/GSE269043/GSM8305462,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305629,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2579,32285,counts,pixel,4.2750625881116635,platform_constant,True,H&E,4.2750625881116635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305629,,,train,hesrt,samples/GSE269054/GSM8305629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305633,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,,,perturbation,luna,myocardial infarction,30 min I/R surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2757,32285,counts,pixel,4.4725977970036235,platform_constant,True,H&E,4.4725977970036235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305633,,,train,hesrt,samples/GSE269054/GSM8305633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305634,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2148,32285,counts,pixel,4.2750625881116635,platform_constant,True,H&E,4.2750625881116635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305634,,,train,hesrt,samples/GSE269054/GSM8305634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305635,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2215,32285,counts,pixel,4.275062588111642,platform_constant,True,H&E,4.275062588111642,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305635,,,train,hesrt,samples/GSE269054/GSM8305635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305639,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1052,32285,counts,pixel,4.244223770924469,platform_constant,True,H&E,4.244223770924469,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305639,,,train,hesrt,samples/GSE269054/GSM8305639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8305640,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2526,32285,counts,pixel,4.18690910740551,platform_constant,True,H&E,4.18690910740551,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305640,,,train,hesrt,samples/GSE269054/GSM8305640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305641,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2530,32285,counts,pixel,4.1869091074055005,platform_constant,True,H&E,4.1869091074055005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305641,,,train,hesrt,samples/GSE269054/GSM8305641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305642,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2280,32285,counts,pixel,4.4725977970036235,platform_constant,True,H&E,4.4725977970036235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305642,,,train,hesrt,samples/GSE269054/GSM8305642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8305643,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2435,32285,counts,pixel,4.275090852894863,platform_constant,True,H&E,4.275090852894863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305643,,,train,hesrt,samples/GSE269054/GSM8305643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305644,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,,,perturbation,luna,myocardial infarction,30 min I/R surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2045,32285,counts,pixel,4.7673042609998415,platform_constant,True,H&E,4.7673042609998415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305644,,,train,hesrt,samples/GSE269054/GSM8305644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305645,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2409,32285,counts,pixel,4.122810398176053,platform_constant,True,H&E,4.122810398176053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305645,,,train,hesrt,samples/GSE269054/GSM8305645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305646,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2808,32285,counts,pixel,4.122782940871393,platform_constant,True,H&E,4.122782940871393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305646,,,train,hesrt,samples/GSE269054/GSM8305646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305647,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery + antibody treatment,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2516,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305647,,,train,hesrt,samples/GSE269054/GSM8305647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305648,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2721,32285,counts,pixel,4.275090852894863,platform_constant,True,H&E,4.275090852894863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305648,,,train,hesrt,samples/GSE269054/GSM8305648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305649,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2150,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305649,,,train,hesrt,samples/GSE269054/GSM8305649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8305650,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1936,32285,counts,pixel,4.1778919676385655,platform_constant,True,H&E,4.1778919676385655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305650,,,train,hesrt,samples/GSE269054/GSM8305650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305651,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1784,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305651,,,train,hesrt,samples/GSE269054/GSM8305651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305652,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,"WT, MI surgery",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2135,32285,counts,pixel,4.2750908528948415,platform_constant,True,H&E,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305652,,,train,hesrt,samples/GSE269054/GSM8305652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305653,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2392,32285,counts,pixel,4.4001730111066655,platform_constant,True,H&E,4.4001730111066655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305653,,,train,hesrt,samples/GSE269054/GSM8305653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM8305655,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2375,32285,counts,pixel,4.417647432954104,platform_constant,True,H&E,4.417647432954104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305655,,,train,hesrt,samples/GSE269054/GSM8305655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305656,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2466,32285,counts,pixel,4.122782940871393,platform_constant,True,H&E,4.122782940871393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305656,,,train,hesrt,samples/GSE269054/GSM8305656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305657,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2341,32285,counts,pixel,4.137884507628592,platform_constant,True,H&E,4.137884507628592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305657,,,train,hesrt,samples/GSE269054/GSM8305657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305659,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2511,32285,counts,pixel,4.366954928291586,platform_constant,True,H&E,4.366954928291586,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305659,,,train,hesrt,samples/GSE269054/GSM8305659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305660,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2349,32285,counts,pixel,4.122810398176053,platform_constant,True,H&E,4.122810398176053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305660,,,train,hesrt,samples/GSE269054/GSM8305660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305661,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2088,32285,counts,pixel,4.470069310669543,platform_constant,True,H&E,4.470069310669543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305661,,,train,hesrt,samples/GSE269054/GSM8305661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305662,GSE269054,GSE269054,Spatially clustered type I interferon responses at injury borderzones,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,myocardial infarction,MI surgery,adult,age rule: age with unit,not stated,10–12 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2222,32285,counts,pixel,4.122810398176053,platform_constant,True,H&E,4.122810398176053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305662,,,train,hesrt,samples/GSE269054/GSM8305662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8305769,GSE269063,GSE269063,scRNA-Seq reveals anti-fibrotic mechanisms of TRPC6 inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0003329,ureteral obstruction,disease,luna,renal fibrosis,"unilateral ureteral obstruction (UUO), SH045 treatment",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,790,32285,counts,pixel,4.8111356219028325,platform_constant,True,H&E,4.8111356219028325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8305769,,,train,hesrt,samples/GSE269063/GSM8305769,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305770,GSE269063,GSE269063,scRNA-Seq reveals anti-fibrotic mechanisms of TRPC6 inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0003329,ureteral obstruction,disease,luna,renal fibrosis,"unilateral ureteral obstruction (UUO), Vehicle treatment",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,570,32285,counts,pixel,4.85086271377426,platform_constant,True,H&E,4.85086271377426,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8305770,,,train,hesrt,samples/GSE269063/GSM8305770,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8312343,GSE269283,GSE269283,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Foxc1 WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1321,32285,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312343,,,train,hesrt,samples/GSE269283/GSM8312343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8312344,GSE269283,GSE269283,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Foxc1 WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1620,32285,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312344,,,train,hesrt,samples/GSE269283/GSM8312344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8312345,GSE269283,GSE269283,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Foxc1 KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2155,32285,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312345,,,train,hesrt,samples/GSE269283/GSM8312345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8312346,GSE269283,GSE269283,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Foxc1 KO,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1523,32285,counts,pixel,4.118779114954516,platform_constant,True,H&E,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312346,,,train,hesrt,samples/GSE269283/GSM8312346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8313236,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,MONDO:0002447,endometrial carcinoma,disease,mondo_predicate (Luna: perturbation),,Normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,446,50560,counts,pixel,4.187233610495957,platform_constant,True,H&E,4.187233610495957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313236,,,train,hesrt,samples/GSE269332/GSM8313236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM8313237,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,disease,luna,,Normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,207,50560,counts,pixel,4.118140943577113,platform_constant,True,H&E,4.118140943577113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313237,,,train,hesrt,samples/GSE269332/GSM8313237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8313238,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,tumour tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,343,50560,counts,pixel,4.118140943577113,platform_constant,True,H&E,4.118140943577113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313238,,,train,hesrt,samples/GSE269332/GSM8313238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8313239,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,296,50560,counts,pixel,4.118140943577097,platform_constant,True,H&E,4.118140943577097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313239,,,train,hesrt,samples/GSE269332/GSM8313239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM8313240,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,tumour tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,408,50560,counts,pixel,4.118140943577099,platform_constant,True,H&E,4.118140943577099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313240,,,train,hesrt,samples/GSE269332/GSM8313240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8313241,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,MONDO:0004993;MONDO:0011962,carcinoma;endometrial cancer,disease,luna,,Pre-dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,213,50560,counts,pixel,4.080769095695792,platform_constant,True,H&E,4.080769095695792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313241,,,train,hesrt,samples/GSE269332/GSM8313241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8313242,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,MONDO:0005213;MONDO:0011962,uterine carcinoma;endometrial cancer,disease,luna,,Pre-dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,310,50560,counts,pixel,4.086538333834155,platform_constant,True,H&E,4.086538333834155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313242,,,train,hesrt,samples/GSE269332/GSM8313242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM8313243,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,MONDO:0005213;MONDO:0011962,uterine carcinoma;endometrial cancer,disease,luna,,Pre-dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,206,50560,counts,pixel,4.152013710001935,platform_constant,True,H&E,4.152013710001935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313243,,,train,hesrt,samples/GSE269332/GSM8313243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8313244,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Pre-dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,257,50560,counts,pixel,4.134615198557692,platform_constant,True,H&E,4.134615198557692,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313244,,,train,hesrt,samples/GSE269332/GSM8313244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8313245,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,tumour tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,417,50560,counts,pixel,4.126923294824628,platform_constant,True,H&E,4.126923294824628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313245,,,train,hesrt,samples/GSE269332/GSM8313245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8313246,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,tumour tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,405,50560,counts,pixel,4.11346168270007,platform_constant,True,H&E,4.11346168270007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313246,,,train,hesrt,samples/GSE269332/GSM8313246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8313247,GSE269332,GSE269332,Cell state dynamics during early stages of serous endometrial carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,tumour tissue,MONDO:0002447,endometrial carcinoma,disease,luna,,Dysplastic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,331,50560,counts,pixel,4.107692255113847,platform_constant,True,H&E,4.107692255113847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313247,,,train,hesrt,samples/GSE269332/GSM8313247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8313612,GSE269354,GSE269354,Xenium In Situ Gene Expression of healthy and asthmatic lung endobronchial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,luna,UBERON:0002048,lung,Lung endobronchial biopsies,primary tissue,MONDO:0004979,asthma,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,62732,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,40399607,,GSM8313612,,,train,sda-all,samples/GSE269354/GSM8313612,sda-tissue-disease-2.5,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8313613,GSE269354,GSE269354,Xenium In Situ Gene Expression of healthy and asthmatic lung endobronchial biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,luna,UBERON:0001005,respiratory airway,Lung endobronchial biopsies,primary tissue,MONDO:0004979,asthma,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43572,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,40399607,,GSM8313613,,,train,sda-all,samples/GSE269354/GSM8313613,sda-tissue-disease-2.5,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8314106,GSE269377,GSE269377,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,mouse spinal cord,primary tissue,,,normal,luna,,non-transgenic and FUS R521H,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,934,32285,counts,pixel,0.2398074639364216,platform_constant,True,H&E,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314106,,,train,hesrt,samples/GSE269377/GSM8314106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM8314107,GSE269377,GSE269377,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,mouse spinal cord,primary tissue,,,normal,luna,,non-transgenic and FUS R521H,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1043,32285,counts,pixel,0.2398074639364216,platform_constant,True,H&E,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314107,,,train,hesrt,samples/GSE269377/GSM8314107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM8314108,GSE269377,GSE269377,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,mouse spinal cord,primary tissue,,,normal,luna,,non-transgenic and FUS R521H,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,792,32285,counts,pixel,0.2398074639364216,platform_constant,True,H&E,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314108,,,train,hesrt,samples/GSE269377/GSM8314108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM8314109,GSE269377,GSE269377,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,mouse spinal cord,primary tissue,,,normal,luna,,non-transgenic and FUS R521H,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,928,32285,counts,pixel,0.2398074639364216,platform_constant,True,H&E,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314109,,,train,hesrt,samples/GSE269377/GSM8314109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM8968967,GSE269379,GSE269379,The CXCL16/CXCR6 axis is linked to immune effector cell-associated neurotoxicity in chimeric antigen receptor (CAR) T cell therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005527,toxic encephalopathy,disease,mondo_predicate (Luna: perturbation),,anti-CD19 CAR T-cell therapy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,302297,18085,counts,um,1.0,verified,True,H&E,4.708497817302379,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40588764,,GSM8968967,,,train,sda-all,samples/GSE269379/GSM8968967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321863,GSE269543,GSE269543,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,median folate,neonatal or infant,age rule: postnatal day,not stated,21 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3602,19465,counts,pixel,4.243684086780494,platform_constant,True,H&E,4.243684086780494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,CG-fb6b97b170cd,cross_gse_redeposit,GSM8741265,train,hesrt,samples/GSE269543/GSM8321863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8321864,GSE269543,GSE269543,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,median folate,neonatal or infant,age rule: postnatal day,not stated,21 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3316,19465,counts,pixel,4.244210577925419,platform_constant,True,H&E,4.244210577925419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,CG-9bec1c12cdf6,cross_gse_redeposit,GSM8741266,train,hesrt,samples/GSE269543/GSM8321864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321865,GSE269543,GSE269543,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,high folate,neonatal or infant,age rule: postnatal day,not stated,21 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3202,19465,counts,pixel,4.243684086780514,platform_constant,True,H&E,4.243684086780514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321865,,,train,hesrt,samples/GSE269543/GSM8321865,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8321866,GSE269543,GSE269543,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,high folate,neonatal or infant,age rule: postnatal day,not stated,21 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3350,19465,counts,pixel,4.37789481043452,platform_constant,True,H&E,4.37789481043452,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321866,,,train,hesrt,samples/GSE269543/GSM8321866,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321875,GSE269545,GSE269545,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,1x PBS injection,adult,age rule: age with unit,not stated,10 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2208,32285,counts,pixel,3.903846054298088,platform_constant,True,H&E,3.903846054298088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321875,,,train,hesrt,samples/GSE269545/GSM8321875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321876,GSE269545,GSE269545,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,1x PBS injection,adult,age rule: age with unit,not stated,10 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2673,32285,counts,pixel,3.8935388810577543,platform_constant,True,H&E,3.8935388810577543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321876,,,train,hesrt,samples/GSE269545/GSM8321876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321877,GSE269545,GSE269545,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021042,glioma,disease,luna,glioma,"1x 80,000 GL261 cells injection",adult,age rule: age with unit,not stated,10 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2327,32285,counts,pixel,3.9661318724347616,platform_constant,True,H&E,3.9661318724347616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321877,,,train,hesrt,samples/GSE269545/GSM8321877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8321878,GSE269545,GSE269545,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021042,glioma,disease,luna,glioma,"1x 80,000 GL261 cells injection",adult,age rule: age with unit,not stated,10 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2769,32285,counts,pixel,4.050515534656392,platform_constant,True,H&E,4.050515534656392,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321878,,,train,hesrt,samples/GSE269545/GSM8321878,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8322399,GSE269576,GSE269576,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0001828,gingiva,Gingival mucosa,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,126,32285,counts,pixel,3.9432237423488132,platform_constant,True,H&E,3.9432237423488132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322399,,,train,hesrt,samples/GSE269576/GSM8322399,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8322400,GSE269576,GSE269576,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0001828,gingiva,Gingival mucosa,primary tissue,,,normal,luna,,GF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,128,32285,counts,pixel,3.9178841007178096,platform_constant,True,H&E,3.9178841007178096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322400,,,train,hesrt,samples/GSE269576/GSM8322400,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8322401,GSE269576,GSE269576,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0001828,gingiva,Gingival mucosa,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,139,32285,counts,pixel,3.8970702941635476,platform_constant,True,H&E,3.8970702941635476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322401,,,train,hesrt,samples/GSE269576/GSM8322401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8322402,GSE269576,GSE269576,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0001828,gingiva,Gingival mucosa,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,144,32285,counts,pixel,3.9927598365655967,platform_constant,True,H&E,3.9927598365655967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322402,,,train,hesrt,samples/GSE269576/GSM8322402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323030,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 18,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,392559,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323030,,,train,sda-all,samples/GSE269617/GSM8323030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM8323031,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 18,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,377651,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323031,,,train,sda-all,samples/GSE269617/GSM8323031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 0.63}",,
GSM8323032,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 18,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,447449,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323032,,,train,sda-all,samples/GSE269617/GSM8323032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM8323033,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 18,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,405842,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323033,,,train,sda-all,samples/GSE269617/GSM8323033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM8323034,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 18,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,445350,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323034,,,train,sda-all,samples/GSE269617/GSM8323034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8323035,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,332172,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323035,,,train,sda-all,samples/GSE269617/GSM8323035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8323036,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,235509,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323036,,,train,sda-all,samples/GSE269617/GSM8323036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8323037,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,212162,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323037,,,train,sda-all,samples/GSE269617/GSM8323037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8323038,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,201299,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323038,,,train,sda-all,samples/GSE269617/GSM8323038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.84, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8323039,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,191883,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323039,,,train,sda-all,samples/GSE269617/GSM8323039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8323040,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,252334,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323040,,,train,sda-all,samples/GSE269617/GSM8323040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323041,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,437323,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323041,,,train,sda-all,samples/GSE269617/GSM8323041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323042,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,271192,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323042,,,train,sda-all,samples/GSE269617/GSM8323042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.92, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8323043,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,289578,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323043,,,train,sda-all,samples/GSE269617/GSM8323043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8323044,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,normal,luna,,Control (PBS treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,282747,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323044,,,train,sda-all,samples/GSE269617/GSM8323044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.88, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8323045,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,404930,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323045,,,train,sda-all,samples/GSE269617/GSM8323045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323046,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,393954,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323046,,,train,sda-all,samples/GSE269617/GSM8323046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8323047,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,378211,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323047,,,train,sda-all,samples/GSE269617/GSM8323047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.9500000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8323048,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,317677,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323048,,,train,sda-all,samples/GSE269617/GSM8323048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323049,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,356514,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323049,,,train,sda-all,samples/GSE269617/GSM8323049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8323050,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,460960,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323050,,,train,sda-all,samples/GSE269617/GSM8323050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8323051,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,541746,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323051,,,train,sda-all,samples/GSE269617/GSM8323051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323052,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,304263,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323052,,,train,sda-all,samples/GSE269617/GSM8323052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8323053,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,351740,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323053,,,train,sda-all,samples/GSE269617/GSM8323053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8323054,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (MIA treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,362238,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323054,,,train,sda-all,samples/GSE269617/GSM8323054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8323055,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,239190,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323055,,,train,sda-all,samples/GSE269617/GSM8323055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8323056,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,274235,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323056,,,train,sda-all,samples/GSE269617/GSM8323056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8323057,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,260441,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323057,,,train,sda-all,samples/GSE269617/GSM8323057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8323058,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,254538,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323058,,,train,sda-all,samples/GSE269617/GSM8323058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8323059,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,male,extracted field,male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,90244,500,unknown,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,near_duplicate_observations,VERIFIED,,,,,,GSM8323059,,,train,sda-all,samples/GSE269617/GSM8323059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8323060,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,77918,500,unknown,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,near_duplicate_observations,VERIFIED,,,,,,GSM8323060,,,train,sda-all,samples/GSE269617/GSM8323060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323061,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,320109,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323061,,,train,sda-all,samples/GSE269617/GSM8323061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323062,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,368523,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323062,,,train,sda-all,samples/GSE269617/GSM8323062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8323063,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,91271,500,unknown,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,near_duplicate_observations,VERIFIED,,,,,,GSM8323063,,,train,sda-all,samples/GSE269617/GSM8323063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323064,GSE269617,GSE269617,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Whole embryonic brain,primary tissue,,,perturbation,luna,,Condition (Abx treated),embryonic,age rule: embryonic day,embryonic,Embryonic day 14,female,extracted field,female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,277689,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323064,,,train,sda-all,samples/GSE269617/GSM8323064,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8324905,GSE269695,GSE269695,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Primary lymphoid tissue,primary tissue,,,disease,luna,,Original biopsy,not stated,luna,not stated,,unknown,not stated,,GSE269695:patient 03,patient 03,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1001,17943,counts,pixel,4.026521732285349,platform_constant,True,H&E,4.026521732285349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324905,,,val,hesrt,samples/GSE269695/GSM8324905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8324906,GSE269695,GSE269695,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001744,lymphoid tissue,Primary lymphoid tissue,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,DLBCL,Original biopsy,not stated,luna,not stated,,unknown,not stated,,GSE269695:patient 08,patient 08,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,349,17943,counts,pixel,3.948260899453538,platform_constant,True,H&E,3.948260899453538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324906,,,val,hesrt,samples/GSE269695/GSM8324906,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8324907,GSE269695,GSE269695,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001744,lymphoid tissue,Lymphoid tissue explants,organoid,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,DLBCL,Control,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,GSE269695:patient 08,patient 08,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,378,17943,counts,pixel,4.038830716445008,platform_constant,True,H&E,4.038830716445008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324907,,,val,hesrt,samples/GSE269695/GSM8324907,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 0.49, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.98}",organ;sample_kind,low_confidence_annotation
GSM8324908,GSE269695,GSE269695,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001744,lymphoid tissue,Lymphoid tissue explants,organoid,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,DLBCL,Ibrutinib,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,GSE269695:patient 08,patient 08,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,135,17943,counts,pixel,4.024990096144494,platform_constant,True,H&E,4.024990096144494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324908,,,val,hesrt,samples/GSE269695/GSM8324908,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8324909,GSE269695,GSE269695,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001744,lymphoid tissue,Lymphoid tissue explants,organoid,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,DLBCL,Idelalisib,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,GSE269695:patient 08,patient 08,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,191,17943,counts,pixel,3.9765219305601986,platform_constant,True,H&E,3.9765219305601986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324909,,,val,hesrt,samples/GSE269695/GSM8324909,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8325615,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,111858,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999226086059223,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325615,,,val,sda-all,samples/GSE269719/GSM8325615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325616,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,84419,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325616,,,val,sda-all,samples/GSE269719/GSM8325616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325617,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,99904,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325617,,,val,sda-all,samples/GSE269719/GSM8325617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325618,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,114493,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000250501002004,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325618,,,val,sda-all,samples/GSE269719/GSM8325618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325619,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,108869,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325619,,,val,sda-all,samples/GSE269719/GSM8325619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8325620,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,112097,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000064486174165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325620,,,val,sda-all,samples/GSE269719/GSM8325620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325621,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,101456,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961268332989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325621,,,val,sda-all,samples/GSE269719/GSM8325621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325622,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,96671,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000265330188679,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325622,,,val,sda-all,samples/GSE269719/GSM8325622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8325623,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,152532,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000250501002004,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325623,,,val,sda-all,samples/GSE269719/GSM8325623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325624,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,148234,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000265330188679,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325624,,,val,sda-all,samples/GSE269719/GSM8325624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325625,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,152574,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999767873723305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325625,,,val,sda-all,samples/GSE269719/GSM8325625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM8325626,GSE269719,GSE269719,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,126332,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000141884222474,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325626,,,val,sda-all,samples/GSE269719/GSM8325626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8329284,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,perturbation,luna,,control,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1254,19465,counts,pixel,4.390954935983405,platform_constant,True,H&E,4.390954935983405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329284,,,train,hesrt,samples/GSE269875/GSM8329284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329285,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,perturbation,luna,,control,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1157,19465,counts,pixel,4.522384718818935,platform_constant,True,H&E,4.522384718818935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329285,,,train,hesrt,samples/GSE269875/GSM8329285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329286,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693;MONDO:1013329,"plasma cell myeloma;plasma cell myeloma, non-human animal",disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,574,19465,counts,pixel,4.608058668043672,platform_constant,True,H&E,4.608058668043672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329286,,,train,hesrt,samples/GSE269875/GSM8329286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329287,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693;MONDO:1013329,"plasma cell myeloma;plasma cell myeloma, non-human animal",disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,772,19465,counts,pixel,4.339447378189332,platform_constant,True,H&E,4.339447378189332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329287,,,train,hesrt,samples/GSE269875/GSM8329287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329288,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693;MONDO:1013329,"plasma cell myeloma;plasma cell myeloma, non-human animal",disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,920,19465,counts,pixel,4.277387044174472,platform_constant,True,H&E,4.277387044174472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329288,,,train,hesrt,samples/GSE269875/GSM8329288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329289,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693;MONDO:1013329,"plasma cell myeloma;plasma cell myeloma, non-human animal",disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,531,19465,counts,pixel,4.298241424380833,platform_constant,True,H&E,4.298241424380833,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329289,,,train,hesrt,samples/GSE269875/GSM8329289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329290,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2055,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329290,,,train,hesrt,samples/GSE269875/GSM8329290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329291,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,822,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329291,,,train,hesrt,samples/GSE269875/GSM8329291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329292,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1254,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329292,,,train,hesrt,samples/GSE269875/GSM8329292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329293,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,373,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329293,,,train,hesrt,samples/GSE269875/GSM8329293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8329294,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,876,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329294,,,train,hesrt,samples/GSE269875/GSM8329294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8329295,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,977,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329295,,,train,hesrt,samples/GSE269875/GSM8329295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329296,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1126,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329296,,,train,hesrt,samples/GSE269875/GSM8329296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329297,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2993,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329297,,,train,hesrt,samples/GSE269875/GSM8329297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8329298,GSE269875,GSE269875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,Multiple Myeloma,Multiple Myeloma,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,875,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329298,,,train,hesrt,samples/GSE269875/GSM8329298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8330060,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,93793,43620,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330060,,,train,sda-all,samples/GSE269906/GSM8330060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330061,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,80183,44092,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330061,,,train,sda-all,samples/GSE269906/GSM8330061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8330062,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,88683,39808,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330062,,,train,sda-all,samples/GSE269906/GSM8330062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330063,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,98835,46330,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330063,,,train,sda-all,samples/GSE269906/GSM8330063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330064,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,72490,42758,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,39779708,,GSM8330064,,,train,sda-all,samples/GSE269906/GSM8330064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330065,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,80404,44135,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330065,,,train,sda-all,samples/GSE269906/GSM8330065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330066,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,86345,44083,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330066,,,train,sda-all,samples/GSE269906/GSM8330066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330067,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,84904,41697,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330067,,,train,sda-all,samples/GSE269906/GSM8330067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330068,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,80655,41162,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330068,,,train,sda-all,samples/GSE269906/GSM8330068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330069,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,68943,42696,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330069,,,train,sda-all,samples/GSE269906/GSM8330069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330070,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0013541,Brodmann (1909) area 10,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,82056,44011,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330070,,,train,sda-all,samples/GSE269906/GSM8330070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330071,GSE269906,GSE269906,Stereo-seq on human prefrontal cortex from six AD and six normal samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000451,prefrontal cortex,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,49729,42355,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39779708,,GSM8330071,,,train,sda-all,samples/GSE269906/GSM8330071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8341551,GSE270389,GSE270389,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,uninjected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3047,31053,counts,pixel,4.357633515253452,platform_constant,True,H&E,4.357633515253452,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341551,,,train,hesrt,samples/GSE270389/GSM8341551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8341552,GSE270389,GSE270389,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,uninjected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3040,31053,counts,pixel,4.358015139616476,platform_constant,True,H&E,4.358015139616476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341552,,,train,hesrt,samples/GSE270389/GSM8341552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8341553,GSE270389,GSE270389,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,injected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2610,31053,counts,pixel,4.358015139616476,platform_constant,True,H&E,4.358015139616476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341553,,,train,hesrt,samples/GSE270389/GSM8341553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8341554,GSE270389,GSE270389,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,injected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2581,31053,counts,pixel,4.7942748633595915,platform_constant,True,H&E,4.7942748633595915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341554,,,train,hesrt,samples/GSE270389/GSM8341554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349861,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 01,Donor 01,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1453,36601,counts,pixel,4.5079234171845375,platform_constant,True,H&E,4.5079234171845375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349861,,,train,hesrt,samples/GSE270678/GSM8349861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349862,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 01,Donor 01,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1390,36601,counts,pixel,4.526502847127605,platform_constant,True,H&E,4.526502847127605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349862,,,train,hesrt,samples/GSE270678/GSM8349862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349863,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 02,Donor 02,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1618,36601,counts,pixel,4.461166078631851,platform_constant,True,H&E,4.461166078631851,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349863,,,train,hesrt,samples/GSE270678/GSM8349863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349864,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 02,Donor 02,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1319,36601,counts,pixel,4.459764431630373,platform_constant,True,H&E,4.459764431630373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349864,,,train,hesrt,samples/GSE270678/GSM8349864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349865,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 03,Donor 03,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2303,36601,counts,pixel,4.463317823093222,platform_constant,True,H&E,4.463317823093222,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349865,,,train,hesrt,samples/GSE270678/GSM8349865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349866,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 03,Donor 03,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2229,36601,counts,pixel,4.461399914110597,platform_constant,True,H&E,4.461399914110597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349866,,,train,hesrt,samples/GSE270678/GSM8349866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349867,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 07,Donor 07,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1793,36601,counts,pixel,6.241666711762731,platform_constant,True,H&E,6.241666711762731,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349867,,,train,hesrt,samples/GSE270678/GSM8349867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8349868,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 09,Donor 09,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1190,36601,counts,pixel,4.618538561166521,platform_constant,True,H&E,4.618538561166521,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349868,,,train,hesrt,samples/GSE270678/GSM8349868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349869,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 09,Donor 09,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1943,36601,counts,pixel,4.61853856116652,platform_constant,True,H&E,4.61853856116652,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349869,,,train,hesrt,samples/GSE270678/GSM8349869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8349870,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 10,Donor 10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2516,36601,counts,pixel,4.329603662547855,platform_constant,True,H&E,4.329603662547855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349870,,,train,hesrt,samples/GSE270678/GSM8349870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8349871,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 11,Donor 11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1787,36601,counts,pixel,4.513020802414612,platform_constant,True,H&E,4.513020802414612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349871,,,train,hesrt,samples/GSE270678/GSM8349871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8349872,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 11,Donor 11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1792,36601,counts,pixel,4.513020802414603,platform_constant,True,H&E,4.513020802414603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349872,,,train,hesrt,samples/GSE270678/GSM8349872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8349873,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 12,Donor 12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1899,36601,counts,pixel,4.9427776607327925,platform_constant,True,H&E,4.9427776607327925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349873,,,train,hesrt,samples/GSE270678/GSM8349873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8349874,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 12,Donor 12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1447,36601,counts,pixel,4.9427776607327925,platform_constant,True,H&E,4.9427776607327925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349874,,,train,hesrt,samples/GSE270678/GSM8349874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349875,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 15,Donor 15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2218,36601,counts,pixel,4.9343526125989206,platform_constant,True,H&E,4.9343526125989206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349875,,,train,hesrt,samples/GSE270678/GSM8349875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349876,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 15,Donor 15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1810,36601,counts,pixel,4.9343526125989206,platform_constant,True,H&E,4.9343526125989206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349876,,,train,hesrt,samples/GSE270678/GSM8349876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349877,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 16,Donor 16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1359,36601,counts,pixel,4.815934116742177,platform_constant,True,H&E,4.815934116742177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349877,,,train,hesrt,samples/GSE270678/GSM8349877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349878,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 16,Donor 16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1520,36601,counts,pixel,4.789617536869264,platform_constant,True,H&E,4.789617536869264,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349878,,,train,hesrt,samples/GSE270678/GSM8349878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349879,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 18,Donor 18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3166,36601,counts,pixel,4.4450895109334025,platform_constant,True,H&E,4.4450895109334025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349879,,,train,hesrt,samples/GSE270678/GSM8349879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349880,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 20,Donor 20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1067,36601,counts,pixel,4.5234971223743665,platform_constant,True,H&E,4.5234971223743665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349880,,,train,hesrt,samples/GSE270678/GSM8349880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349881,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 20,Donor 20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3037,36601,counts,pixel,4.5234971223743665,platform_constant,True,H&E,4.5234971223743665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349881,,,train,hesrt,samples/GSE270678/GSM8349881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349882,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 21,Donor 21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1949,36601,counts,pixel,4.513008999491088,platform_constant,True,H&E,4.513008999491088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349882,,,train,hesrt,samples/GSE270678/GSM8349882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349883,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 21,Donor 21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,794,36601,counts,pixel,4.513053178625199,platform_constant,True,H&E,4.513053178625199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349883,,,train,hesrt,samples/GSE270678/GSM8349883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349884,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 22,Donor 22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1593,36601,counts,pixel,4.30666676709813,platform_constant,True,H&E,4.30666676709813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349884,,,train,hesrt,samples/GSE270678/GSM8349884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349885,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 23,Donor 23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1784,36601,counts,pixel,4.638105780062523,platform_constant,True,H&E,4.638105780062523,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349885,,,train,hesrt,samples/GSE270678/GSM8349885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349886,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 24,Donor 24,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3557,36601,counts,pixel,4.216367252596353,platform_constant,True,H&E,4.216367252596353,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349886,,,train,hesrt,samples/GSE270678/GSM8349886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349887,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 24,Donor 24,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2156,36601,counts,pixel,4.445854105003441,platform_constant,True,H&E,4.445854105003441,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349887,,,train,hesrt,samples/GSE270678/GSM8349887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349888,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 26,Donor 26,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3455,36601,counts,pixel,4.857948425945679,platform_constant,True,H&E,4.857948425945679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349888,,,train,hesrt,samples/GSE270678/GSM8349888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349889,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 26,Donor 26,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2834,36601,counts,pixel,4.698068051856702,platform_constant,True,H&E,4.698068051856702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349889,,,train,hesrt,samples/GSE270678/GSM8349889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349890,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 26,Donor 26,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2282,36601,counts,pixel,4.770591243121117,platform_constant,True,H&E,4.770591243121117,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349890,,,train,hesrt,samples/GSE270678/GSM8349890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349891,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 27,Donor 27,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1369,36601,counts,pixel,4.505000115395577,platform_constant,True,H&E,4.505000115395577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349891,,,train,hesrt,samples/GSE270678/GSM8349891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349892,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 27,Donor 27,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2047,36601,counts,pixel,4.3427775891275315,platform_constant,True,H&E,4.3427775891275315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349892,,,train,hesrt,samples/GSE270678/GSM8349892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349893,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 28,Donor 28,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2044,36601,counts,pixel,4.271110808716454,platform_constant,True,H&E,4.271110808716454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349893,,,train,hesrt,samples/GSE270678/GSM8349893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349894,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 01,Donor 01,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1762,36601,counts,pixel,4.559444392307212,platform_constant,True,H&E,4.559444392307212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349894,,,train,hesrt,samples/GSE270678/GSM8349894,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8349895,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 01,Donor 01,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1666,36601,counts,pixel,4.414999926931739,platform_constant,True,H&E,4.414999926931739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349895,,,train,hesrt,samples/GSE270678/GSM8349895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349896,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 03,Donor 03,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3478,36601,counts,pixel,4.541111261512718,platform_constant,True,H&E,4.541111261512718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349896,,,train,hesrt,samples/GSE270678/GSM8349896,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349897,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 03,Donor 03,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3294,36601,counts,pixel,4.58333319010414,platform_constant,True,H&E,4.58333319010414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349897,,,train,hesrt,samples/GSE270678/GSM8349897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349898,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 07,Donor 07,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2082,36601,counts,pixel,6.241666711762709,platform_constant,True,H&E,6.241666711762709,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349898,,,train,hesrt,samples/GSE270678/GSM8349898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349899,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 10,Donor 10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1560,36601,counts,pixel,5.354444494401423,platform_constant,True,H&E,5.354444494401423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349899,,,train,hesrt,samples/GSE270678/GSM8349899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349900,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 10,Donor 10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1806,36601,counts,pixel,5.354444494401423,platform_constant,True,H&E,5.354444494401423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349900,,,train,hesrt,samples/GSE270678/GSM8349900,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.87}",,
GSM8349901,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 11,Donor 11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2388,36601,counts,pixel,4.505000115395566,platform_constant,True,H&E,4.505000115395566,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349901,,,train,hesrt,samples/GSE270678/GSM8349901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349902,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 11,Donor 11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2385,36601,counts,pixel,4.721666718132844,platform_constant,True,H&E,4.721666718132844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349902,,,train,hesrt,samples/GSE270678/GSM8349902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349903,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 11,Donor 11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1428,36601,counts,pixel,4.505000115395577,platform_constant,True,H&E,4.505000115395577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349903,,,train,hesrt,samples/GSE270678/GSM8349903,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8349904,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 11,Donor 11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1342,36601,counts,pixel,4.721666718132831,platform_constant,True,H&E,4.721666718132831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349904,,,train,hesrt,samples/GSE270678/GSM8349904,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.84}",,
GSM8349905,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 15,Donor 15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2675,36601,counts,pixel,5.091666545739547,platform_constant,True,H&E,5.091666545739547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349905,,,train,hesrt,samples/GSE270678/GSM8349905,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349906,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 15,Donor 15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1845,36601,counts,pixel,5.091666545739547,platform_constant,True,H&E,5.091666545739547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349906,,,train,hesrt,samples/GSE270678/GSM8349906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349907,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 16,Donor 16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,613,36601,counts,pixel,4.8116668138796275,platform_constant,True,H&E,4.8116668138796275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349907,,,train,hesrt,samples/GSE270678/GSM8349907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349908,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 16,Donor 16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,650,36601,counts,pixel,4.77555548258507,platform_constant,True,H&E,4.77555548258507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349908,,,train,hesrt,samples/GSE270678/GSM8349908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349909,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 16,Donor 16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2182,36601,counts,pixel,4.8116668138796275,platform_constant,True,H&E,4.8116668138796275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349909,,,train,hesrt,samples/GSE270678/GSM8349909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8349910,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 16,Donor 16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1962,36601,counts,pixel,4.77555548258507,platform_constant,True,H&E,4.77555548258507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349910,,,train,hesrt,samples/GSE270678/GSM8349910,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8349911,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 18,Donor 18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3072,36601,counts,pixel,4.721666718132844,platform_constant,True,H&E,4.721666718132844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349911,,,train,hesrt,samples/GSE270678/GSM8349911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349912,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 18,Donor 18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2140,36601,counts,pixel,4.672405056236847,platform_constant,True,H&E,4.672405056236847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349912,,,train,hesrt,samples/GSE270678/GSM8349912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349913,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 20,Donor 20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,984,36601,counts,pixel,5.537777904039106,platform_constant,True,H&E,5.537777904039106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349913,,,train,hesrt,samples/GSE270678/GSM8349913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8349914,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 20,Donor 20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2883,36601,counts,pixel,5.537777904039106,platform_constant,True,H&E,5.537777904039106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349914,,,train,hesrt,samples/GSE270678/GSM8349914,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8349915,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 21,Donor 21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1655,36601,counts,pixel,4.7983334351539675,platform_constant,True,H&E,4.7983334351539675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349915,,,train,hesrt,samples/GSE270678/GSM8349915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8349916,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 21,Donor 21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1924,36601,counts,pixel,4.711111243022193,platform_constant,True,H&E,4.711111243022193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349916,,,train,hesrt,samples/GSE270678/GSM8349916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM8349917,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 21,Donor 21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1291,36601,counts,pixel,4.798333435153994,platform_constant,True,H&E,4.798333435153994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349917,,,train,hesrt,samples/GSE270678/GSM8349917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349918,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 21,Donor 21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1395,36601,counts,pixel,4.711111243022193,platform_constant,True,H&E,4.711111243022193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349918,,,train,hesrt,samples/GSE270678/GSM8349918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349919,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 22,Donor 22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1338,36601,counts,pixel,4.654636926778667,platform_constant,True,H&E,4.654636926778667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349919,,,train,hesrt,samples/GSE270678/GSM8349919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8349920,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 23,Donor 23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2005,36601,counts,pixel,4.617435479847994,platform_constant,True,H&E,4.617435479847994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349920,,,train,hesrt,samples/GSE270678/GSM8349920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8349921,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 24,Donor 24,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3960,36601,counts,pixel,4.834444496559747,platform_constant,True,H&E,4.834444496559747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349921,,,train,hesrt,samples/GSE270678/GSM8349921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM8349922,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 24,Donor 24,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2759,36601,counts,pixel,4.3427775891275315,platform_constant,True,H&E,4.3427775891275315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349922,,,train,hesrt,samples/GSE270678/GSM8349922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349923,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 26,Donor 26,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3706,36601,counts,pixel,4.8741436810769185,platform_constant,True,H&E,4.8741436810769185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349923,,,train,hesrt,samples/GSE270678/GSM8349923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349924,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 26,Donor 26,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3505,36601,counts,pixel,4.529720414242332,platform_constant,True,H&E,4.529720414242332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349924,,,train,hesrt,samples/GSE270678/GSM8349924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349925,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 26,Donor 26,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2812,36601,counts,pixel,4.620270435391185,platform_constant,True,H&E,4.620270435391185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349925,,,train,hesrt,samples/GSE270678/GSM8349925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349926,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 27,Donor 27,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2534,36601,counts,pixel,4.746373628925057,platform_constant,True,H&E,4.746373628925057,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349926,,,train,hesrt,samples/GSE270678/GSM8349926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349927,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 27,Donor 27,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3367,36601,counts,pixel,4.325000052981256,platform_constant,True,H&E,4.325000052981256,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349927,,,train,hesrt,samples/GSE270678/GSM8349927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8349928,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 27,Donor 27,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4105,36601,counts,pixel,4.600222821297506,platform_constant,True,H&E,4.600222821297506,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349928,,,train,hesrt,samples/GSE270678/GSM8349928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8349929,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Edge,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 27,Donor 27,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2212,36601,counts,pixel,4.69304373232092,platform_constant,True,H&E,4.69304373232092,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349929,,,train,hesrt,samples/GSE270678/GSM8349929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349930,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,In-between,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 28,Donor 28,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1592,36601,counts,pixel,4.474723894149122,platform_constant,True,H&E,4.474723894149122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349930,,,train,hesrt,samples/GSE270678/GSM8349930,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349931,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 30,Donor 30,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2226,36601,counts,pixel,4.325000052981245,platform_constant,True,H&E,4.325000052981245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349931,,,train,hesrt,samples/GSE270678/GSM8349931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349932,GSE270678,GSE270678,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Gastric cancer tumor,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,gastric cancer,Core,not stated,luna,not stated,,unknown,not stated,,GSE270678:Donor 30,Donor 30,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2861,36601,counts,pixel,4.765555585959783,platform_constant,True,H&E,4.765555585959783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349932,,,train,hesrt,samples/GSE270678/GSM8349932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8367223,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,,,normal,luna,,C57BL/6J,adult,luna,adult,75 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1196,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.664392717443788,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367223,,,train,sda-all,samples/GSE271011/GSM8367223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.27, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8367224,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,,,normal,luna,,C57BL/6J,adult,luna,adult,150 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,852,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.661277560142778,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367224,,,train,sda-all,samples/GSE271011/GSM8367224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.32, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8367225,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),juvenile,luna,juvenile,75 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,872,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.665033645134912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367225,,,train,sda-all,samples/GSE271011/GSM8367225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8367226,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),adult,luna,adult,150 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,518,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.664779328415307,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367226,,,train,sda-all,samples/GSE271011/GSM8367226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8367227,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),juvenile,luna,juvenile,75 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,640,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.675533288169167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367227,,,train,sda-all,samples/GSE271011/GSM8367227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8367228,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),juvenile,luna,juvenile,75 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,616,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.665193036058008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367228,,,train,sda-all,samples/GSE271011/GSM8367228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 0.99}",,
GSM8367229,GSE271011,GSE271011,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001386,extensor digitorum longus,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),adult,luna,adult,150 days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,594,32285,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",4.668393205739615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367229,,,train,sda-all,samples/GSE271011/GSM8367229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8368271,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,normal,luna,,Wild type,embryonic,age rule: embryonic day,embryonic,E14.5,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,854,32589,counts,um,1.0,verified,True,H&E-like (heuristic),4.429583071033197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8368271,,,train,sda-all,samples/GSE271077/GSM8368271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8368272,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0005893,leg bone,leg bone,primary tissue,,,normal,luna,,Wild type,neonatal or infant,age rule: postnatal day,neonatal or infant,P8,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,1094,32589,counts,um,1.0,verified,True,H&E-like (heuristic),4.426673987262891,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8368272,,,train,sda-all,samples/GSE271077/GSM8368272,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8368273,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,Wild type,adult,luna,adult,Adult,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,1038,32589,counts,um,1.0,verified,True,H&E-like (heuristic),4.428467484015576,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8368273,,,train,sda-all,samples/GSE271077/GSM8368273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8407228,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,leg bone,primary tissue,,,normal,luna,,No treatment,aged,luna,aged,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,934,32589,counts,um,1.0,verified,True,H&E-like (heuristic),4.303681791192756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8407228,,,train,sda-all,samples/GSE271077/GSM8407228,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM8927829,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,normal,luna,,No treatment,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,491,32589,counts,um,1.0,verified,True,H&E-like (heuristic),4.430306304725564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8927829,,,train,sda-all,samples/GSE271077/GSM8927829,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8927830,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,leg bone,primary tissue,,,normal,luna,,EDTA (0.5M) treatment for 5 days,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,814,32589,counts,um,1.0,verified,True,H&E-like (heuristic),3.8450828640302017,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8927830,,,train,sda-all,samples/GSE271077/GSM8927830,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.49, ""life_stage"": 0.46}",disease_status;uberon;life_stage,low_confidence_annotation
GSM9745604,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,normal,luna,,No treatment,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2353,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.489653726080569,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745604,,,train,sda-all,samples/GSE271077/GSM9745604,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9745605,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,normal,luna,,No treatment,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,806,19465,counts,um,1.0,verified,True,H&E-like (heuristic),2.233243670779976,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745605,,,train,sda-all,samples/GSE271077/GSM9745605,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9745606,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,perturbation,luna,,No treatment,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2195,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.731872304914385,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745606,,,train,sda-all,samples/GSE271077/GSM9745606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.84, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9745607,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,perturbation,luna,,No treatment,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,589,19465,counts,um,1.0,verified,True,H&E-like (heuristic),2.11814985926101,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745607,,,train,sda-all,samples/GSE271077/GSM9745607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.64, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9745608,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1430,19465,counts,um,1.0,verified,True,H&E-like (heuristic),2.5032242493768666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745608,,,train,sda-all,samples/GSE271077/GSM9745608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9745609,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2009,19465,counts,um,1.0,verified,True,H&E-like (heuristic),3.3509299297348063,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745609,,,train,sda-all,samples/GSE271077/GSM9745609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9745610,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,perturbation,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1341,19465,counts,um,1.0,verified,True,H&E-like (heuristic),2.5417282261293583,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745610,,,train,sda-all,samples/GSE271077/GSM9745610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9745611,GSE271077,GSE271077,Spatial mapping reveals erythroid niches in mice during development and stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,perturbation,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1371,19465,counts,um,1.0,verified,True,H&E-like (heuristic),2.4673171272000234,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745611,,,train,sda-all,samples/GSE271077/GSM9745611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370059,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6743,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370059,,,train,sda-all,samples/GSE271118/GSM8370059,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.43, ""life_stage"": 0.99}",organ;uberon,low_confidence_annotation
GSM8370060,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,3289,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8370060,,,train,sda-all,samples/GSE271118/GSM8370060,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.54, ""life_stage"": 0.99}",organ;uberon,low_confidence_annotation
GSM8370061,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,3166,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8370061,,,train,sda-all,samples/GSE271118/GSM8370061,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM8370062,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6426,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370062,,,train,sda-all,samples/GSE271118/GSM8370062,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.39, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8370063,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13929,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370063,,,train,sda-all,samples/GSE271118/GSM8370063,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM8370064,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7745,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370064,,,train,sda-all,samples/GSE271118/GSM8370064,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.6000000000000001, ""life_stage"": 0.99}",,
GSM8370065,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8232,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370065,,,train,sda-all,samples/GSE271118/GSM8370065,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM8370066,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5031,136,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations;shared_positions,VERIFIED,,,,,,GSM8370066,,,train,sda-all,samples/GSE271118/GSM8370066,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.46, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8370067,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,3368,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8370067,,,train,sda-all,samples/GSE271118/GSM8370067,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.78, ""life_stage"": 0.97}",,
GSM8370068,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,,,normal,luna,,WT,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,4311,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8370068,,,train,sda-all,samples/GSE271118/GSM8370068,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6900000000000001, ""life_stage"": 0.93}",,
GSM8981692,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6824,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981692,,,train,sda-all,samples/GSE271118/GSM8981692,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.61, ""life_stage"": 0.99}",organ;disease_status,low_confidence_annotation
GSM8981693,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,mondo_predicate (Luna: perturbation),,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,2776,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8981693,,,train,sda-all,samples/GSE271118/GSM8981693,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8981694,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,2229,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8981694,,,train,sda-all,samples/GSE271118/GSM8981694,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8981695,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,3845,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8981695,,,train,sda-all,samples/GSE271118/GSM8981695,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8981696,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,mondo_predicate (Luna: perturbation),,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6641,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981696,,,train,sda-all,samples/GSE271118/GSM8981696,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM8981697,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8117,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981697,,,train,sda-all,samples/GSE271118/GSM8981697,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8981698,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5852,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981698,,,train,sda-all,samples/GSE271118/GSM8981698,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.54, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8981699,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5251,136,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations;shared_positions,VERIFIED,,,,,,GSM8981699,,,train,sda-all,samples/GSE271118/GSM8981699,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.4, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM8981700,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,3706,136,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8981700,,,train,sda-all,samples/GSE271118/GSM8981700,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8981701,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,mondo_predicate (Luna: perturbation),,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7892,136,counts,unstated,,unresolved,False,,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981701,,,train,sda-all,samples/GSE271118/GSM8981701,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.53, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM8981702,GSE271118,GSE271118,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0001891,midbrain,human midbrain-like organoids,organoid,MONDO:0005180,Parkinson disease,disease,luna,,DJ-1 KO,not stated,rule: culture or organoid (culture time is not a life stage),not stated,60,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5075,136,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations;shared_positions,VERIFIED,,,,,,GSM8981702,,,train,sda-all,samples/GSE271118/GSM8981702,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8370814,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Fetal liver,primary tissue,,,normal,luna,,No treatment,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3103,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.425783786824677,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370814,,,train,sda-all,samples/GSE271150/GSM8370814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8370815,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3595,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.382861470927495,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370815,,,train,sda-all,samples/GSE271150/GSM8370815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370816,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3586,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.397649616032367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370816,,,train,sda-all,samples/GSE271150/GSM8370816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370817,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,1950,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.380084542291267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370817,,,train,sda-all,samples/GSE271150/GSM8370817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370818,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,2944,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.379195256879274,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370818,,,train,sda-all,samples/GSE271150/GSM8370818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370819,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3067,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.380274847428818,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370819,,,train,sda-all,samples/GSE271150/GSM8370819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8370820,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,1451,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.386501014841959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370820,,,train,sda-all,samples/GSE271150/GSM8370820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370821,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,2816,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.918504243158633,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370821,,,train,sda-all,samples/GSE271150/GSM8370821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370822,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3336,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.9195368190367805,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370822,,,train,sda-all,samples/GSE271150/GSM8370822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370823,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,1952,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.911146702888269,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370823,,,train,sda-all,samples/GSE271150/GSM8370823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370824,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3523,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.915569589516483,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370824,,,train,sda-all,samples/GSE271150/GSM8370824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370825,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3860,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.915488053892097,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370825,,,train,sda-all,samples/GSE271150/GSM8370825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8370826,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,2971,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.919549640307393,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370826,,,train,sda-all,samples/GSE271150/GSM8370826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8940307,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow clot,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3382,37082,counts,um,1.0,verified,True,H&E-like (heuristic),5.132637810025819,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8940307,,,train,sda-all,samples/GSE271150/GSM8940307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9745612,GSE271150,GSE271150,Spatial mapping reveals erythroid niches in human during development and stress,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,fetal liver,primary tissue,,,normal,luna,,No treatment,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,2155,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.422394891397117,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745612,,,train,sda-all,samples/GSE271150/GSM9745612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.98}",,
GSM8375640,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4683,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.9779483610087203,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375640,,,test,sda-all,samples/GSE271370/GSM8375640,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8375641,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3649,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.921036428580514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375641,,,test,sda-all,samples/GSE271370/GSM8375641,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8375642,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4768,17943,counts,um,1.0,verified,True,other bright-field stain (see review notes),4.1913004409291155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375642,,,test,sda-all,samples/GSE271370/GSM8375642,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8375643,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2204,17943,counts,um,1.0,verified,True,other bright-field stain (see review notes),4.235897075204899,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375643,,,test,sda-all,samples/GSE271370/GSM8375643,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8387358,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4409,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.200465971071704,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387358,,,test,sda-all,samples/GSE271370/GSM8387358,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8387359,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3963,17943,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.291432367138355,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387359,,,test,sda-all,samples/GSE271370/GSM8387359,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387360,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4127,17943,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.211683383825733,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387360,,,test,sda-all,samples/GSE271370/GSM8387360,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387361,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4816,17943,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.16448769937006,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387361,,,test,sda-all,samples/GSE271370/GSM8387361,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387362,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4213,17943,counts,um,1.0,verified,True,undetermined,4.197293301703671,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387362,,,test,sda-all,samples/GSE271370/GSM8387362,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8387363,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4613,17943,counts,um,1.0,verified,True,undetermined,4.336667244342068,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387363,,,test,sda-all,samples/GSE271370/GSM8387363,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387364,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3849,17943,counts,um,1.0,verified,True,other bright-field stain (see review notes),4.268687229154004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387364,,,test,sda-all,samples/GSE271370/GSM8387364,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387365,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4212,17943,counts,um,1.0,verified,True,other bright-field stain (see review notes),4.277671357939148,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387365,,,test,sda-all,samples/GSE271370/GSM8387365,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387366,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Proliferative DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4498,17943,counts,um,1.0,verified,True,other bright-field stain (see review notes),4.151952103388087,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387366,,,test,sda-all,samples/GSE271370/GSM8387366,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387367,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3717,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.8971653273397564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387367,,,test,sda-all,samples/GSE271370/GSM8387367,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387368,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3643,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.9518118693154496,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387368,,,test,sda-all,samples/GSE271370/GSM8387368,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8387369,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3264,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.9273535251806795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387369,,,test,sda-all,samples/GSE271370/GSM8387369,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8387370,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4620,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.094136098593613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387370,,,test,sda-all,samples/GSE271370/GSM8387370,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387371,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4619,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.207434820821884,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387371,,,test,sda-all,samples/GSE271370/GSM8387371,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8387372,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4602,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.235773512219491,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387372,,,test,sda-all,samples/GSE271370/GSM8387372,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8387373,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275;MONDO:0100096,lung disorder;COVID-19,disease,luna,Acute DAD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4561,17943,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.226008892608912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,reviewer could not judge any sample of GSE271370,,,GSM8387373,,,test,sda-all,samples/GSE271370/GSM8387373,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8387374,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4542,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.913108283085134,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387374,,,test,sda-all,samples/GSE271370/GSM8387374,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387375,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3517,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),3.8981134943626183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387375,,,test,sda-all,samples/GSE271370/GSM8387375,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8387376,GSE271370,GSE271370,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4086,17943,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.085333504092165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387376,,,test,sda-all,samples/GSE271370/GSM8387376,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8376639,GSE271422,GSE271422,spatialGE is a User-Friendly Web Application that Facilitates Spatial Transcriptomics Data Analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,melanoma metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1732,36601,counts,pixel,4.996153721050163,platform_constant,True,H&E,4.996153721050163,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39636739,,GSM8376639,,,train,hesrt,samples/GSE271422/GSM8376639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8376640,GSE271422,GSE271422,spatialGE is a User-Friendly Web Application that Facilitates Spatial Transcriptomics Data Analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,melanoma metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1302,36601,counts,pixel,4.057692301605761,platform_constant,True,H&E,4.057692301605761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39636739,,GSM8376640,,,train,hesrt,samples/GSE271422/GSM8376640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8376641,GSE271422,GSE271422,spatialGE is a User-Friendly Web Application that Facilitates Spatial Transcriptomics Data Analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain melanoma metastasis,metastasis,MONDO:0005105,melanoma,disease,luna,melanoma metastasis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1425,36601,counts,pixel,4.007692300478453,platform_constant,True,H&E,4.007692300478453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39636739,,GSM8376641,,,train,hesrt,samples/GSE271422/GSM8376641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8382626,GSE271693,GSE271693,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,WT mice embryo E14.5 days fetal liver,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117329,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000112099889624,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382626,,,train,sda-all,samples/GSE271693/GSM8382626,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8382627,GSE271693,GSE271693,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,8 days postnatal WT mice bone marrow,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52594,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000047006618532,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382627,,,train,sda-all,samples/GSE271693/GSM8382627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8382628,GSE271693,GSE271693,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Adult WT mice spleen,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,108338,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000308641975308,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382628,,,train,sda-all,samples/GSE271693/GSM8382628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8382629,GSE271693,GSE271693,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,PHZ treated mice spleen,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,94582,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077407369181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382629,,,train,sda-all,samples/GSE271693/GSM8382629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8945653,GSE271693,GSE271693,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,WT mice embryo E13.5 days fetal liver,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5285,13617,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999488543371522,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8945653,,,train,sda-all,samples/GSE271693/GSM8945653,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8945654,GSE271693,GSE271693,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,89 weeks old WT mice bone marrow,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,143810,13617,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999812030075186,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8945654,,,train,sda-all,samples/GSE271693/GSM8945654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.71}",,
GSM8383560,GSE271725,GSE271725,A soil-grown wheat root atlas with validated cross-species cluster annotations allows to delineate conserved tissue specific marker genes [Spatial Transcriptomics],Triticum aestivum,4565,bread wheat,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,plant,luna,,,Root,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,159278,77502,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,39893633,,GSM8383560,,,val,sda-all,samples/GSE271725/GSM8383560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8383561,GSE271725,GSE271725,A soil-grown wheat root atlas with validated cross-species cluster annotations allows to delineate conserved tissue specific marker genes [Spatial Transcriptomics],Triticum aestivum,4565,bread wheat,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,plant,luna,,,Root,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,167120,96646,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,39893633,,GSM8383561,,,val,sda-all,samples/GSE271725/GSM8383561,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8385442,GSE271795,GSE271795,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,esophagus,luna,UBERON:0001043,esophagus,mouse embryo,primary tissue,,,normal,luna,,not treated,embryonic,age rule: embryonic day,embryonic,E13.5,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3228,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.680371432066744,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385442,,,train,sda-all,samples/GSE271795/GSM8385442,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8385443,GSE271795,GSE271795,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,esophagus,luna,UBERON:0001043,esophagus,mouse embryo,primary tissue,,,normal,luna,,not treated,embryonic,age rule: embryonic day,embryonic,E16.5,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3593,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.6331995258967344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385443,,,train,sda-all,samples/GSE271795/GSM8385443,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8385444,GSE271795,GSE271795,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,esophagus,luna,UBERON:0001043,esophagus,esophagus,primary tissue,,,normal,luna,,not treated,neonatal or infant,age rule: postnatal day,neonatal or infant,P0,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,366,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.949407132378689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385444,,,train,sda-all,samples/GSE271795/GSM8385444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8385445,GSE271795,GSE271795,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,esophagus,luna,UBERON:0001043,esophagus,esophagus,primary tissue,,,normal,luna,,not treated,neonatal or infant,age rule: postnatal day,neonatal or infant,P0,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,271,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.080174294689524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385445,,,train,sda-all,samples/GSE271795/GSM8385445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8386295,GSE271824,GSE271824,High resolution mapping of erythroid niches in human using subcellular spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,16 weeks GA fetal liver,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_94g,xenium-1.7.1.0,cell,224957,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999885247406591,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8386295,,,train,sda-all,samples/GSE271824/GSM8386295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8386296,GSE271824,GSE271824,High resolution mapping of erythroid niches in human using subcellular spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,normal case bone marrow,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_94g,xenium-1.7.1.0,cell,40939,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999827705031013,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8386296,,,train,sda-all,samples/GSE271824/GSM8386296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8386297,GSE271824,GSE271824,High resolution mapping of erythroid niches in human using subcellular spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,MDS patient bone marrow,primary tissue,MONDO:0018881,myelodysplastic syndrome,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_94g,xenium-1.7.1.0,cell,38492,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000072314049586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8386297,,,train,sda-all,samples/GSE271824/GSM8386297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8389375,GSE271936,GSE271936,Immune and tumor cell landscape in pediatric high grade gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Diffuse High Grade Glioma,tumour tissue,MONDO:1010030,pediatric high-grade glioma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,8,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,94660,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998621576916,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40315846,,GSM8389375,,,train,sda-all,samples/GSE271936/GSM8389375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8389376,GSE271936,GSE271936,Immune and tumor cell landscape in pediatric high grade gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Ependymoma,tumour tissue,MONDO:0100342;MONDO:0016698;MONDO:0006517,malignant glioma;ependymoma;childhood malignant neoplasm,disease,luna,,,neonatal or infant,luna,neonatal or infant,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56117,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499980638166047,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40315846,,GSM8389376,,,train,sda-all,samples/GSE271936/GSM8389376,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.8200000000000001}",,
GSM8389378,GSE271936,GSE271936,Immune and tumor cell landscape in pediatric high grade gliomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Diffuse High Grade Glioma,tumour tissue,MONDO:1010030,pediatric high-grade glioma,disease,luna,,,juvenile,age rule: bare number read as years,juvenile,7,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,104642,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000186196623635,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40315846,,GSM8389378,,,train,sda-all,samples/GSE271936/GSM8389378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8396159,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1462,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.226894534517015,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396159,,,train,sda-all,samples/GSE272236/GSM8396159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8396160,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1398,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.248756506898975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339360,,GSM8396160,,,train,sda-all,samples/GSE272236/GSM8396160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8396161,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2723,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.232015608494873,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396161,,,train,sda-all,samples/GSE272236/GSM8396161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8396162,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1921,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.224432986778781,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396162,,,train,sda-all,samples/GSE272236/GSM8396162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8396163,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2301,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.2317715981227115,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396163,,,train,sda-all,samples/GSE272236/GSM8396163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8396164,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2383,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.226974064634488,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396164,,,train,sda-all,samples/GSE272236/GSM8396164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8396165,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2725,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.236681021294811,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396165,,,train,sda-all,samples/GSE272236/GSM8396165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8396166,GSE272236,GSE272236,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,no treatment applied,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2887,21834,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.234191405533975,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396166,,,train,sda-all,samples/GSE272236/GSM8396166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398121,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,adult,luna,adult,7,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,57703,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999051724137916,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398121,,,test,sda-all,samples/GSE272303/GSM8398121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398122,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,adult,luna,adult,7,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,60632,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999939675973803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398122,,,test,sda-all,samples/GSE272303/GSM8398122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398123,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,adult,luna,adult,7,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,61273,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999624229670825,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398123,,,test,sda-all,samples/GSE272303/GSM8398123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398124,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,,,normal,luna,,,adult,luna,adult,7,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,59214,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017247326665,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398124,,,test,sda-all,samples/GSE272303/GSM8398124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398125,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,MONDO:0000510,synucleinopathy,disease,luna,,,adult,luna,adult,7,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,51863,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999803881090007,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398125,,,test,sda-all,samples/GSE272303/GSM8398125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398126,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,MONDO:0000510,synucleinopathy,disease,luna,,,adult,luna,adult,7,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,55349,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000187941662908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398126,,,test,sda-all,samples/GSE272303/GSM8398126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398127,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,MONDO:0000510,synucleinopathy,disease,luna,,,adult,luna,adult,7,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,52795,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998873281754674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398127,,,test,sda-all,samples/GSE272303/GSM8398127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398128,GSE272303,GSE272303,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Coronal brain section,primary tissue,MONDO:0000510,synucleinopathy,disease,luna,,,adult,luna,adult,7,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,56900,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000187941662908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398128,,,test,sda-all,samples/GSE272303/GSM8398128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398717,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1903,17943,counts,pixel,4.400369126900356,platform_constant,True,H&E,4.400369126900356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398717,,,train,hesrt,samples/GSE272334/GSM8398717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398718,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2215,17943,counts,pixel,4.400339168674096,platform_constant,True,H&E,4.400339168674096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398718,,,train,hesrt,samples/GSE272334/GSM8398718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398719,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2804,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398719,,,train,hesrt,samples/GSE272334/GSM8398719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398720,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2730,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398720,,,train,hesrt,samples/GSE272334/GSM8398720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398721,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3879,17943,counts,pixel,4.400339168674117,platform_constant,True,H&E,4.400339168674117,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398721,,,train,hesrt,samples/GSE272334/GSM8398721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398722,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2519,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398722,,,train,hesrt,samples/GSE272334/GSM8398722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398723,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1814,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398723,,,train,hesrt,samples/GSE272334/GSM8398723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398724,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1889,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398724,,,train,hesrt,samples/GSE272334/GSM8398724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398725,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3659,17943,counts,pixel,4.400369126900356,platform_constant,True,H&E,4.400369126900356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398725,,,train,hesrt,samples/GSE272334/GSM8398725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398726,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3332,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398726,,,train,hesrt,samples/GSE272334/GSM8398726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398727,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Radiotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1586,17943,counts,pixel,4.400339168674096,platform_constant,True,H&E,4.400339168674096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398727,,,train,hesrt,samples/GSE272334/GSM8398727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398728,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3205,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398728,,,train,hesrt,samples/GSE272334/GSM8398728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8398729,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2247,17943,counts,pixel,4.69372706869371,platform_constant,True,H&E,4.69372706869371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398729,,,train,hesrt,samples/GSE272334/GSM8398729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8398730,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3262,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398730,,,train,hesrt,samples/GSE272334/GSM8398730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8398731,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3396,17943,counts,pixel,4.4003391686741065,platform_constant,True,H&E,4.4003391686741065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398731,,,train,hesrt,samples/GSE272334/GSM8398731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398732,GSE272334,GSE272334,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2773,17943,counts,pixel,4.400339168674118,platform_constant,True,H&E,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398732,,,train,hesrt,samples/GSE272334/GSM8398732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398743,GSE272337,GSE272337,Xenium spatial transcriptomics reveals C10 tumor transcriptomic changes induced by Smarta cell,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,C10 subcutaneous tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,PBS or Smarta treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mTumor_307g,xenium-1.7.1.0,cell,720758,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999967345872518,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42313973,,GSM8398743,,,train,sda-all,samples/GSE272337/GSM8398743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8398744,GSE272337,GSE272337,Xenium spatial transcriptomics reveals C10 tumor transcriptomic changes induced by Smarta cell,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,C10 subcutaneous tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,PBS or Smarta treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mTumor_307g,xenium-1.7.1.0,cell,710015,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500003810477725,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42313973,,GSM8398744,,,train,sda-all,samples/GSE272337/GSM8398744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8401816,GSE272421,GSE272421,Spatial transcriptomics stereo-seq was used to reveal the functional compartmentalization of Unicentric Castleman Disease.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,MONDO:0015564,Castleman disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,47829,29783,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8401816,,,val,sda-all,samples/GSE272421/GSM8401816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8404653,GSE272564+GSE272566,GSE272564,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,APAP 0h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1483,32285,counts,pixel,4.253865152198557,platform_constant,True,H&E,4.253865152198557,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404653,,,train,hesrt,samples/GSE272564/GSM8404653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8404654,GSE272564+GSE272566,GSE272564,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,APAP 3h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1723,32285,counts,pixel,4.160419378674996,platform_constant,True,H&E,4.160419378674996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404654,,,train,hesrt,samples/GSE272564/GSM8404654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8404655,GSE272564+GSE272566,GSE272564,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,APAP 6h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1585,32285,counts,pixel,4.160419378674996,platform_constant,True,H&E,4.160419378674996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404655,,,train,hesrt,samples/GSE272564/GSM8404655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8404656,GSE272564+GSE272566,GSE272564,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,APAP 24h,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1655,32285,counts,pixel,4.049117658768747,platform_constant,True,H&E,4.049117658768747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404656,,,train,hesrt,samples/GSE272564/GSM8404656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8413261,GSE272833,GSE272833,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005096;MONDO:0008170;MONDO:0003517,squamous cell carcinoma;ovarian cancer;mature teratoma,disease,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,not stated,luna,not stated,,unknown,not stated,,GSE272833:Patient_1,Patient_1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,476,36601,counts,pixel,4.298348295306839,platform_constant,True,H&E,4.298348295306839,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413261,,,train,hesrt,samples/GSE272833/GSM8413261,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8413262,GSE272833,GSE272833,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005096;MONDO:0008170;MONDO:0003517,squamous cell carcinoma;ovarian cancer;mature teratoma,disease,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,not stated,luna,not stated,,unknown,not stated,,GSE272833:Patient_2,Patient_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,869,36601,counts,pixel,4.29720302518842,platform_constant,True,H&E,4.29720302518842,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413262,,,train,hesrt,samples/GSE272833/GSM8413262,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8413263,GSE272833,GSE272833,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005096;MONDO:0008170;MONDO:0003517,squamous cell carcinoma;ovarian cancer;mature teratoma,disease,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,not stated,luna,not stated,,unknown,not stated,,GSE272833:Patient_3,Patient_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2597,36601,counts,pixel,4.368956848044238,platform_constant,True,H&E,4.368956848044238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413263,,,train,hesrt,samples/GSE272833/GSM8413263,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8413264,GSE272833,GSE272833,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005096;MONDO:0008170;MONDO:0003517,squamous cell carcinoma;ovarian cancer;mature teratoma,disease,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,not stated,luna,not stated,,unknown,not stated,,GSE272833:Patient_3,Patient_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2750,36601,counts,pixel,4.801156231088131,platform_constant,True,H&E,4.801156231088131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413264,,,train,hesrt,samples/GSE272833/GSM8413264,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8415601,GSE272960,GSE272960,EWS-FLI1 Expression in Human Embryonic Mesenchymal Stem Cells Leads to Defective DNA Damage Repair and Ewing Sarcoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,cell culture,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1365,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.000775996672156,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136396,,GSM8415601,,,val,sda-all,samples/GSE272960/GSM8415601,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.58, ""disease_status"": 0.48, ""uberon"": 0.9, ""life_stage"": 0.98}",sample_kind;disease_status,low_confidence_annotation
GSM8415602,GSE272960,GSE272960,EWS-FLI1 Expression in Human Embryonic Mesenchymal Stem Cells Leads to Defective DNA Damage Repair and Ewing Sarcoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor mass,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1381,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.007700421361625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136396,,GSM8415602,,,val,sda-all,samples/GSE272960/GSM8415602,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8425592,GSE273275,GSE273275,stRNA-seq of brain glioblastoma sample,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,GBM surround,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4233,36601,counts,pixel,4.091665845934915,platform_constant,True,H&E,4.091665845934915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39933531,10.1016/j.devcel.2025.01.014,GSM8425592,,,train,hesrt,samples/GSE273275/GSM8425592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8425593,GSE273275,GSE273275,stRNA-seq of brain glioblastoma sample,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,GBM centre,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3869,36601,counts,pixel,4.102767356618687,platform_constant,True,H&E,4.102767356618687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39933531,10.1016/j.devcel.2025.01.014,GSM8425593,,,train,hesrt,samples/GSE273275/GSM8425593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427428,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,68,male,extracted field,male,GSE273378:30868,30868,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2401,17943,counts,pixel,4.074791939763849,platform_constant,True,H&E,4.074791939763849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427428,,,train,hesrt,samples/GSE273378/GSM8427428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8427429,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,68,male,extracted field,male,GSE273378:30868,30868,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2756,17943,counts,pixel,4.139593638518339,platform_constant,True,H&E,4.139593638518339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427429,,,train,hesrt,samples/GSE273378/GSM8427429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8427430,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE273378:21448,21448,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2724,17943,counts,pixel,4.200198979418035,platform_constant,True,H&E,4.200198979418035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427430,,,train,hesrt,samples/GSE273378/GSM8427430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427431,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE273378:21448,21448,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1728,17943,counts,pixel,4.023532142130024,platform_constant,True,H&E,4.023532142130024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427431,,,train,hesrt,samples/GSE273378/GSM8427431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8427432,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE273378:27086,27086,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3922,17943,counts,pixel,4.38967506668645,platform_constant,True,H&E,4.38967506668645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427432,,,train,hesrt,samples/GSE273378/GSM8427432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427433,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE273378:4710,4710,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3525,17943,counts,pixel,4.449015474663473,platform_constant,True,H&E,4.449015474663473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427433,,,train,hesrt,samples/GSE273378/GSM8427433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8427434,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,aged,age rule: bare number read as years,aged,72,male,extracted field,male,GSE273378:611,611,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3230,17943,counts,pixel,4.3133289525714895,platform_constant,True,H&E,4.3133289525714895,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427434,,,train,hesrt,samples/GSE273378/GSM8427434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427435,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,65,male,extracted field,male,GSE273378:9475,9475,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3784,17943,counts,pixel,4.098780991094822,platform_constant,True,H&E,4.098780991094822,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427435,,,train,hesrt,samples/GSE273378/GSM8427435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427436,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LMP,adult,age rule: bare number read as years,adult,52,female,extracted field,female,GSE273378:1984,1984,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2833,17943,counts,pixel,4.209633668685756,platform_constant,True,H&E,4.209633668685756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427436,,,train,hesrt,samples/GSE273378/GSM8427436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427437,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE273378:11980,11980,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2855,17943,counts,pixel,4.158626158747832,platform_constant,True,H&E,4.158626158747832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427437,,,train,hesrt,samples/GSE273378/GSM8427437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8427438,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,VI,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE273378:3255,3255,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2801,17943,counts,pixel,4.138583478281284,platform_constant,True,H&E,4.138583478281284,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427438,,,train,hesrt,samples/GSE273378/GSM8427438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427439,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,aged,age rule: bare number read as years,aged,69,male,extracted field,male,GSE273378:29063,29063,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2620,17943,counts,pixel,4.350449412695565,platform_constant,True,H&E,4.350449412695565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427439,,,train,hesrt,samples/GSE273378/GSM8427439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427440,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE273378:13034,13034,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3604,17943,counts,pixel,4.279743380674974,platform_constant,True,H&E,4.279743380674974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427440,,,train,hesrt,samples/GSE273378/GSM8427440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427441,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE273378:915,915,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2912,17943,counts,pixel,4.122927155623384,platform_constant,True,H&E,4.122927155623384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427441,,,train,hesrt,samples/GSE273378/GSM8427441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427442,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,aged,age rule: bare number read as years,aged,72,female,extracted field,female,GSE273378:22809,22809,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1915,17943,counts,pixel,4.198178671948288,platform_constant,True,H&E,4.198178671948288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427442,,,train,hesrt,samples/GSE273378/GSM8427442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427443,GSE273378,GSE273378,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,NST,aged,age rule: bare number read as years,aged,75,female,extracted field,female,GSE273378:25115,25115,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1744,17943,counts,pixel,4.1731791269700595,platform_constant,True,H&E,4.1731791269700595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427443,,,train,hesrt,samples/GSE273378/GSM8427443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8428199,GSE273432,GSE273432,The roles of glioma-associated macrophages/microglia in human GBM,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,5.355519526324199,platform_constant,True,H&E,5.355519526324199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428199,,,train,hesrt,samples/GSE273432/GSM8428199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8428200,GSE273432,GSE273432,The roles of glioma-associated macrophages/microglia in human GBM,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3638,18085,counts,pixel,4.7759914035569775,platform_constant,True,H&E,4.7759914035569775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428200,,,train,hesrt,samples/GSE273432/GSM8428200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8428201,GSE273432,GSE273432,The roles of glioma-associated macrophages/microglia in human GBM,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4437,18085,counts,pixel,6.263487657307462,platform_constant,True,H&E,6.263487657307462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428201,,,train,hesrt,samples/GSE273432/GSM8428201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8428202,GSE273432,GSE273432,The roles of glioma-associated macrophages/microglia in human GBM,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4635,18085,counts,pixel,5.981682021878986,platform_constant,True,H&E,5.981682021878986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428202,,,train,hesrt,samples/GSE273432/GSM8428202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8428408,GSE273439,GSE273439,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,uberon_chain,UBERON:0012282,mammary fat pad,Breast tumor,xenograft,MONDO:0007254,breast cancer,disease,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE273439:GSM8428408,GSM8428408,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2596,19465,counts,pixel,6.8464286891871495,platform_constant,True,H&E,6.8464286891871495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428408,,,train,hesrt,samples/GSE273439/GSM8428408,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.45, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 0.92}",sample_kind,low_confidence_annotation
GSM8428409,GSE273439,GSE273439,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0007254,breast cancer,disease,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE273439:GSM8428409,GSM8428409,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1697,19465,counts,pixel,6.612765993420255,platform_constant,True,H&E,6.612765993420255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428409,,,train,hesrt,samples/GSE273439/GSM8428409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.74}",sample_kind,low_confidence_annotation
GSM8428410,GSE273439,GSE273439,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,uberon_chain,UBERON:0012282,mammary fat pad,Breast tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE273439:GSM8428410,GSM8428410,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2372,19465,counts,pixel,6.756521775885902,platform_constant,True,H&E,6.756521775885902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428410,,,train,hesrt,samples/GSE273439/GSM8428410,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.51, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 0.87}",sample_kind,low_confidence_annotation
GSM8428411,GSE273439,GSE273439,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0007254,breast cancer,disease,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,GSE273439:GSM8428411,GSM8428411,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2780,19465,counts,pixel,6.4249992866730095,platform_constant,True,H&E,6.4249992866730095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428411,,,train,hesrt,samples/GSE273439/GSM8428411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM8429991,GSE273489,GSE273489,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,colorectal carcinoma,isotype control,adult,age rule: age with unit,not stated,8–12 weeks,female,extracted field,female,GSE273489:C57BL/6J x CC080/TauUncJ,C57BL/6J x CC080/TauUncJ,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2787,32285,counts,pixel,4.090066160640678,platform_constant,True,H&E,4.090066160640678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429991,,,train,hesrt,samples/GSE273489/GSM8429991,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8429992,GSE273489,GSE273489,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,colorectal carcinoma,isotype control,adult,age rule: age with unit,not stated,8–12 weeks,female,extracted field,female,GSE273489:C57BL/6J x CC075/UncJ,C57BL/6J x CC075/UncJ,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2710,32285,counts,pixel,4.090066160640678,platform_constant,True,H&E,4.090066160640678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429992,,,train,hesrt,samples/GSE273489/GSM8429992,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8429993,GSE273489,GSE273489,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,colorectal carcinoma,isotype control,adult,age rule: age with unit,not stated,8–12 weeks,female,extracted field,female,GSE273489:C57BL/6J x CC080/TauUncJ,C57BL/6J x CC080/TauUncJ,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3174,32285,counts,pixel,4.090066160640678,platform_constant,True,H&E,4.090066160640678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429993,,,train,hesrt,samples/GSE273489/GSM8429993,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.78, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8429994,GSE273489,GSE273489,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,colorectal carcinoma,isotype control,adult,age rule: age with unit,not stated,8–12 weeks,female,extracted field,female,GSE273489:C57BL/6J x CC075/UncJ,C57BL/6J x CC075/UncJ,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3276,32285,counts,pixel,4.090066160640669,platform_constant,True,H&E,4.090066160640669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429994,,,train,hesrt,samples/GSE273489/GSM8429994,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.78, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8431774,GSE273530,GSE273530,Programmed cell death-1 receptor deficiency enhances CD30+ T regulatory cell function in Melanoma [Murine NanoString CosMx SMI],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,Melanoma tumours,tumour tissue,MONDO:0005105,melanoma,disease,luna,,WTTeff:WT Treg or WTTeff:PD1KO Treg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,9231,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40457060,,GSM8431774,,,train,sda-all,samples/GSE273530/GSM8431774,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8432292,GSE273557,GSE273557,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,56,female,extracted field,female,GSE273557:2103-02139,2103-02139,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45239,496,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432292,,,train,sda-all,samples/GSE273557/GSM8432292,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8432293,GSE273557,GSE273557,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,23,male,extracted field,male,GSE273557:2106-05090,2106-05090,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27162,496,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432293,,,train,sda-all,samples/GSE273557/GSM8432293,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8432294,GSE273557,GSE273557,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,23,male,extracted field,male,GSE273557:2106-05090,2106-05090,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,40896,512,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432294,,,train,sda-all,samples/GSE273557/GSM8432294,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8432295,GSE273557,GSE273557,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,23,male,extracted field,male,GSE273557:2106-05090,2106-05090,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38021,520,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432295,,,train,sda-all,samples/GSE273557/GSM8432295,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8433816,GSE273606,GSE273606,In vivo armed macrophages curb liver metastasis through tumor reactive T cell rejuvenation (MERFISH),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,211627,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40216735,,GSM8433816,,,test,sda-all,samples/GSE273606/GSM8433816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8433817,GSE273606,GSE273606,In vivo armed macrophages curb liver metastasis through tumor reactive T cell rejuvenation (MERFISH),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,249986,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,40216735,,GSM8433817,,,test,sda-all,samples/GSE273606/GSM8433817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8440303,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4794,17943,counts,pixel,5.727853719982235,platform_constant,True,H&E,5.727853719982235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440303,,,train,hesrt,samples/GSE273952/GSM8440303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440304,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4991,17943,counts,pixel,5.753886136883518,platform_constant,True,H&E,5.753886136883518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440304,,,train,hesrt,samples/GSE273952/GSM8440304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8440305,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4793,17943,counts,pixel,5.308699731640132,platform_constant,True,H&E,5.308699731640132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440305,,,train,hesrt,samples/GSE273952/GSM8440305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440306,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4547,17943,counts,pixel,5.260274309260301,platform_constant,True,H&E,5.260274309260301,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440306,,,train,hesrt,samples/GSE273952/GSM8440306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8440308,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4962,17943,counts,pixel,6.487670945550741,platform_constant,True,H&E,6.487670945550741,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440308,,,train,hesrt,samples/GSE273952/GSM8440308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8440309,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4693,17943,counts,pixel,6.19348278241706,platform_constant,True,H&E,6.19348278241706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440309,,,train,hesrt,samples/GSE273952/GSM8440309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8440310,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4958,17943,counts,pixel,7.364383829353919,platform_constant,True,H&E,7.364383829353919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440310,,,train,hesrt,samples/GSE273952/GSM8440310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440312,GSE273952,GSE273952,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,renal cell cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4943,17943,counts,pixel,6.106357473557294,platform_constant,True,H&E,6.106357473557294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440312,,,train,hesrt,samples/GSE273952/GSM8440312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440997,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,Sham Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2300,19465,counts,pixel,4.806106985575569,platform_constant,True,H&E,4.806106985575569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8440997,,,train,hesrt,samples/GSE273978/GSM8440997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8440998,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2151,19465,counts,pixel,4.808396885786738,platform_constant,True,H&E,4.808396885786738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8440998,,,train,hesrt,samples/GSE273978/GSM8440998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8440999,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO CH6824025,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2218,19465,counts,pixel,4.806488282377554,platform_constant,True,H&E,4.806488282377554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8440999,,,train,hesrt,samples/GSE273978/GSM8440999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8441000,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO CH6824025,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2423,19465,counts,pixel,4.8076337470150765,platform_constant,True,H&E,4.8076337470150765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441000,,,train,hesrt,samples/GSE273978/GSM8441000,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8441001,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1974,19465,counts,pixel,4.3674300320928845,platform_constant,True,H&E,4.3674300320928845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441001,,,train,hesrt,samples/GSE273978/GSM8441001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8441002,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2051,19465,counts,pixel,4.809020154111703,platform_constant,True,H&E,4.809020154111703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441002,,,train,hesrt,samples/GSE273978/GSM8441002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8441003,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO CH6824025,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2027,19465,counts,pixel,4.8076337470150765,platform_constant,True,H&E,4.8076337470150765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441003,,,train,hesrt,samples/GSE273978/GSM8441003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8441004,GSE273978,GSE273978,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,disease,luna,,UUO CH6824025,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2320,19465,counts,pixel,4.808396885786738,platform_constant,True,H&E,4.808396885786738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441004,,,train,hesrt,samples/GSE273978/GSM8441004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8442438,GSE274042,GSE274042,Spatiotemporal liver dynamics shapes hepatocellular heterogeneity and impacts in vivo gene engineering [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,26037,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8442438,,,train,sda-all,samples/GSE274042/GSM8442438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8442439,GSE274042,GSE274042,Spatiotemporal liver dynamics shapes hepatocellular heterogeneity and impacts in vivo gene engineering [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,85929,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8442439,,,train,sda-all,samples/GSE274042/GSM8442439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8442674,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV+ Burkitt Lymphoma,tumour tissue,MONDO:0007243,Burkitt lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_5,Luf_5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3687,18085,counts,pixel,6.796875821980031,platform_constant,True,H&E,6.796875821980031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442674,,,train,hesrt,samples/GSE274051/GSM8442674,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442675,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV+ Polymorphic Lymphoma,tumour tissue,MONDO:0018908;MONDO:0017343,non-Hodgkin lymphoma;Epstein-Barr virus-associated lymphoproliferative disorder,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_9,Luf_9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6308,18085,counts,pixel,8.161027852456357,platform_constant,True,H&E,8.161027852456357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442675,,,train,hesrt,samples/GSE274051/GSM8442675,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442676,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV+ Immunoblastic Lymphoma,tumour tissue,MONDO:0018905;MONDO:0017343,diffuse large B-cell lymphoma;Epstein-Barr virus-associated lymphoproliferative disorder,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_1,Luf_1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9776,18085,counts,pixel,6.866895181199018,platform_constant,True,H&E,6.866895181199018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442676,,,train,hesrt,samples/GSE274051/GSM8442676,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442677,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV+ Plasmablastic Lymphoma,tumour tissue,MONDO:0017347,plasmablastic lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_3,Luf_3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2814,18085,counts,pixel,5.6042598542451225,platform_constant,True,H&E,5.6042598542451225,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442677,,,train,hesrt,samples/GSE274051/GSM8442677,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442678,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV+ High Grade Plasma Cell Neoplasm,tumour tissue,MONDO:0004959;MONDO:0018905;MONDO:0017343,plasma cell neoplasm;diffuse large B-cell lymphoma;Epstein-Barr virus-associated lymphoproliferative disorder,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_7,Luf_7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3371,18085,counts,pixel,4.308339312511227,platform_constant,True,H&E,4.308339312511227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442678,,,train,hesrt,samples/GSE274051/GSM8442678,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442679,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV- High Grade GC B cell NHL,tumour tissue,MONDO:0015759,B-cell non-Hodgkin lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_4,Luf_4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13945,18085,counts,pixel,8.490553590176166,platform_constant,True,H&E,8.490553590176166,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442679,,,train,hesrt,samples/GSE274051/GSM8442679,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442680,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV- GC DLBCL,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,not stated,luna,not stated,,female,extracted field,female,GSE274051:Luf_2,Luf_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3470,18085,counts,pixel,3.825631669354788,platform_constant,True,H&E,3.825631669354788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442680,,,train,hesrt,samples/GSE274051/GSM8442680,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442681,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV- DLBCL with Plasma Cell features,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_6,Luf_6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9020,18085,counts,pixel,7.564352226404502,platform_constant,True,H&E,7.564352226404502,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442681,,,train,hesrt,samples/GSE274051/GSM8442681,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442682,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV- non-GC DLBCL (relapse),tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_8,Luf_8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3980,18085,counts,pixel,5.724477700702643,platform_constant,True,H&E,5.724477700702643,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442682,,,train,hesrt,samples/GSE274051/GSM8442682,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442683,GSE274051,GSE274051,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,EBV- non-GC DLBCL (recurrence),tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,not stated,luna,not stated,,male,extracted field,male,GSE274051:Luf_10,Luf_10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4370,18085,counts,pixel,6.915073208828963,platform_constant,True,H&E,6.915073208828963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442683,,,train,hesrt,samples/GSE274051/GSM8442683,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442776,GSE274059,GSE274059,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Hif2a-flox/flox,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,369,32285,counts,pixel,4.301019898098783,platform_constant,True,H&E,4.301019898098783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442776,,,train,hesrt,samples/GSE274059/GSM8442776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM8442777,GSE274059,GSE274059,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Hif2s-flox/flox; Pgr-Cre/+,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,533,32285,counts,pixel,4.302928210239887,platform_constant,True,H&E,4.302928210239887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442777,,,train,hesrt,samples/GSE274059/GSM8442777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8442778,GSE274059,GSE274059,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Lox-flox/flox,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,662,32285,counts,pixel,4.299999935930002,platform_constant,True,H&E,4.299999935930002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442778,,,train,hesrt,samples/GSE274059/GSM8442778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM8442779,GSE274059,GSE274059,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Lox-flox/flox,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,436,32285,counts,pixel,4.2996182326834935,platform_constant,True,H&E,4.2996182326834935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442779,,,train,hesrt,samples/GSE274059/GSM8442779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM8442780,GSE274059,GSE274059,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Lox-flox/flox; Pgr-Cre/+,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,454,32285,counts,pixel,4.301526457314896,platform_constant,True,H&E,4.301526457314896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442780,,,train,hesrt,samples/GSE274059/GSM8442780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM8442781,GSE274059,GSE274059,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Lox-flox/flox; Pgr-Cre/+,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,408,32285,counts,pixel,4.3007635457758076,platform_constant,True,H&E,4.3007635457758076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442781,,,train,hesrt,samples/GSE274059/GSM8442781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8443449,GSE274103,GSE274103,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,78.9,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4987,17943,counts,pixel,4.650537450014783,platform_constant,True,H&E,4.650537450014783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443449,,,train,hesrt,samples/GSE274103/GSM8443449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443450,GSE274103,GSE274103,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,80.9,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4380,17943,counts,pixel,4.477304139549158,platform_constant,True,H&E,4.477304139549158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443450,,,train,hesrt,samples/GSE274103/GSM8443450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443451,GSE274103,GSE274103,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,78.2,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4134,17943,counts,pixel,4.464487715384358,platform_constant,True,H&E,4.464487715384358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443451,,,train,hesrt,samples/GSE274103/GSM8443451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443452,GSE274103,GSE274103,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,77.3,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4983,17943,counts,pixel,4.477419175240472,platform_constant,True,H&E,4.477419175240472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443452,,,train,hesrt,samples/GSE274103/GSM8443452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443453,GSE274103,GSE274103,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,84.8,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4952,17943,counts,pixel,4.477419175240484,platform_constant,True,H&E,4.477419175240484,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443453,,,train,hesrt,samples/GSE274103/GSM8443453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8447269,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_MUT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1761,36601,counts,pixel,4.1806450435633495,platform_constant,True,H&E,4.1806450435633495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447269,,,train,hesrt,samples/GSE274314/GSM8447269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8447270,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0001422,primary aldosteronism,disease,mondo_predicate,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1141,36601,counts,pixel,4.1806450435633495,platform_constant,True,H&E,4.1806450435633495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447270,,,train,hesrt,samples/GSE274314/GSM8447270,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447271,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_WT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,394,36601,counts,pixel,4.129399245160178,platform_constant,True,H&E,4.129399245160178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447271,,,train,hesrt,samples/GSE274314/GSM8447271,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8447272,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0003009,hyperaldosteronism,disease,luna,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,756,36601,counts,pixel,4.129399245160178,platform_constant,True,H&E,4.129399245160178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447272,,,train,hesrt,samples/GSE274314/GSM8447272,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447273,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0003009,hyperaldosteronism,disease,luna,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,830,36601,counts,pixel,4.178471586154414,platform_constant,True,H&E,4.178471586154414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447273,,,train,hesrt,samples/GSE274314/GSM8447273,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.31, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447274,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_MUT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2024,36601,counts,pixel,4.315795907440296,platform_constant,True,H&E,4.315795907440296,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447274,,,train,hesrt,samples/GSE274314/GSM8447274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8447275,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0003009,hyperaldosteronism,disease,mondo_predicate,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient4,Patient4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,414,36601,counts,pixel,4.180379720869155,platform_constant,True,H&E,4.180379720869155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447275,,,train,hesrt,samples/GSE274314/GSM8447275,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447276,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_WT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient4,Patient4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,404,36601,counts,pixel,4.077419305909678,platform_constant,True,H&E,4.077419305909678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447276,,,train,hesrt,samples/GSE274314/GSM8447276,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8447277,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0001422,primary aldosteronism,disease,mondo_predicate,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient5,Patient5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1086,36601,counts,pixel,4.3138852855971175,platform_constant,True,H&E,4.3138852855971175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447277,,,train,hesrt,samples/GSE274314/GSM8447277,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.96, ""disease_status"": 0.37, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447278,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_MUT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient5,Patient5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1005,36601,counts,pixel,4.339678235324803,platform_constant,True,H&E,4.339678235324803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447278,,,train,hesrt,samples/GSE274314/GSM8447278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8447279,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0003009,hyperaldosteronism,disease,mondo_predicate,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient6,Patient6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1906,36601,counts,pixel,4.218614830370244,platform_constant,True,H&E,4.218614830370244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447279,,,train,hesrt,samples/GSE274314/GSM8447279,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447280,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_WT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient6,Patient6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1608,36601,counts,pixel,4.359023129524562,platform_constant,True,H&E,4.359023129524562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447280,,,train,hesrt,samples/GSE274314/GSM8447280,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8447281,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adjacent,primary tissue,MONDO:0001422,primary aldosteronism,disease,mondo_predicate,,adjacent,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient7,Patient7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1945,36601,counts,pixel,4.2494025026260225,platform_constant,True,H&E,4.2494025026260225,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447281,,,train,hesrt,samples/GSE274314/GSM8447281,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447282,GSE274314,GSE274314,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,APA,tumour tissue,MONDO:0001422;MONDO:0004972,primary aldosteronism;adenoma,disease,luna,primary aldosteronism,KCNJ5_MUT,not stated,luna,not stated,,unknown,not stated,,GSE274314:Patient7,Patient7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1380,36601,counts,pixel,4.237732365145434,platform_constant,True,H&E,4.237732365145434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447282,,,train,hesrt,samples/GSE274314/GSM8447282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8449354,GSE274447,GSE274447,In vivo Spatial Perturb-Seq in the mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001869,cerebral hemisphere,brain coronal hemisphere,primary tissue,,,perturbation,luna,,Injected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOMICS,,,cell,39862,26280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41723140,,GSM8449354,,,train,sda-all,samples/GSE274447/GSM8449354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM8450059,GSE274489,GSE274489,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018824,pyoderma gangrenosum,disease,luna,pyoderma gangrenosum,Untreated,not stated,luna,not stated,,unknown,not stated,,GSE274489:DP22,DP22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1616,18085,counts,pixel,2.909064555617312,platform_constant,True,H&E,2.909064555617312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450059,,,train,hesrt,samples/GSE274489/GSM8450059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450060,GSE274489,GSE274489,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018824,pyoderma gangrenosum,disease,luna,pyoderma gangrenosum,Untreated,not stated,luna,not stated,,unknown,not stated,,GSE274489:DP22,DP22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1304,18085,counts,pixel,5.167862986124308,platform_constant,True,H&E,5.167862986124308,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450060,,,train,hesrt,samples/GSE274489/GSM8450060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450061,GSE274489,GSE274489,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018824,pyoderma gangrenosum,disease,luna,pyoderma gangrenosum,ustekinumab,not stated,luna,not stated,,unknown,not stated,,GSE274489:DP23,DP23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,919,18085,counts,pixel,2.9049645985007713,platform_constant,True,H&E,2.9049645985007713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450061,,,train,hesrt,samples/GSE274489/GSM8450061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450062,GSE274489,GSE274489,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018824,pyoderma gangrenosum,disease,luna,pyoderma gangrenosum,ustekinumab,not stated,luna,not stated,,unknown,not stated,,GSE274489:DP23,DP23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1838,18085,counts,pixel,3.3846617139460684,platform_constant,True,H&E,3.3846617139460684,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450062,,,train,hesrt,samples/GSE274489/GSM8450062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450394,GSE274497,GSE274497,Spatial transcriptomics of murine eyelid,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0001711,eyelid,eyelid,primary tissue,,,normal,luna,,wild type,adult,age rule: age with unit,adult,8 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,375,32285,counts,pixel,5.83384571514098,platform_constant,True,H&E,5.83384571514098,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39955307,,GSM8450394,,,train,hesrt,samples/GSE274497/GSM8450394,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8450578,GSE274509,GSE274509,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,ovarian cancer,Untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2823,19465,counts,pixel,3.986277110945238,platform_constant,True,H&E,3.986277110945238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450578,,,train,hesrt,samples/GSE274509/GSM8450578,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.25, ""life_stage"": 1.0}",organ;sample_kind;uberon,low_confidence_annotation
GSM8450579,GSE274509,GSE274509,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovarian cancer,metastasis,MONDO:0008170,ovarian cancer,disease,luna,ovarian cancer,ACT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2312,19465,counts,pixel,4.004158773964351,platform_constant,True,H&E,4.004158773964351,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450579,,,train,hesrt,samples/GSE274509/GSM8450579,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.28, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450580,GSE274509,GSE274509,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,ovarian cancer,OV-FC + ACT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1676,19465,counts,pixel,3.940793294660439,platform_constant,True,H&E,3.940793294660439,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450580,,,train,hesrt,samples/GSE274509/GSM8450580,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 0.51, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",organ;sample_kind;uberon,low_confidence_annotation
GSM8450581,GSE274509,GSE274509,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,ovarian cancer,OV-CXCR4 + ACT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2329,19465,counts,pixel,3.974449856511901,platform_constant,True,H&E,3.974449856511901,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450581,,,train,hesrt,samples/GSE274509/GSM8450581,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.39, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",sample_kind;uberon,low_confidence_annotation
GSM8452847,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE274557:Pt-1,Pt-1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2753,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999927144634293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452847,,,train,hesrt,samples/GSE274557/GSM8452847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452848,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE274557:Pt-1,Pt-1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2956,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000058427649042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452848,,,train,hesrt,samples/GSE274557/GSM8452848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452849,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE274557:Pt-1,Pt-1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3047,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000149192692016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452849,,,train,hesrt,samples/GSE274557/GSM8452849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452850,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-2,Pt-2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2674,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000118152387497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452850,,,train,hesrt,samples/GSE274557/GSM8452850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452851,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-2,Pt-2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2867,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.49999953486251936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452851,,,train,hesrt,samples/GSE274557/GSM8452851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8452852,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-2,Pt-2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2322,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000152423169756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452852,,,train,hesrt,samples/GSE274557/GSM8452852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452853,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,89,female,extracted field,female,GSE274557:Pt-3,Pt-3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2999,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000115204718785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452853,,,train,hesrt,samples/GSE274557/GSM8452853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452854,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,89,female,extracted field,female,GSE274557:Pt-3,Pt-3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2696,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000127304900693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452854,,,train,hesrt,samples/GSE274557/GSM8452854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8452855,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,89,female,extracted field,female,GSE274557:Pt-3,Pt-3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2537,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999857108665287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452855,,,train,hesrt,samples/GSE274557/GSM8452855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452856,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-4,Pt-4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3155,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000059724147943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452856,,,train,hesrt,samples/GSE274557/GSM8452856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452857,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-4,Pt-4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2773,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000087145489853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452857,,,train,hesrt,samples/GSE274557/GSM8452857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452858,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-4,Pt-4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2623,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999995407581715,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452858,,,train,hesrt,samples/GSE274557/GSM8452858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8452859,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE274557:Pt-4,Pt-4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3493,36601,counts,pixel,0.36339618107142985,platform_constant,True,H&E,0.4999894283204744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452859,,,train,hesrt,samples/GSE274557/GSM8452859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452860,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,84,female,extracted field,female,GSE274557:Pt-5,Pt-5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2931,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000100504532755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452860,,,train,hesrt,samples/GSE274557/GSM8452860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452861,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,84,female,extracted field,female,GSE274557:Pt-5,Pt-5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2772,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.49999636134732034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452861,,,train,hesrt,samples/GSE274557/GSM8452861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452862,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,84,female,extracted field,female,GSE274557:Pt-5,Pt-5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2397,36601,counts,pixel,0.36230932827735274,platform_constant,True,H&E,0.5000022098220016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452862,,,train,hesrt,samples/GSE274557/GSM8452862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452863,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",adult,age rule: bare number read as years,adult,60,male,extracted field,male,GSE274557:Pt-6,Pt-6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1758,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.4999985487332786,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452863,,,train,hesrt,samples/GSE274557/GSM8452863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452864,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",adult,age rule: bare number read as years,adult,60,male,extracted field,male,GSE274557:Pt-6,Pt-6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2686,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999967594302893,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452864,,,train,hesrt,samples/GSE274557/GSM8452864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452865,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",adult,age rule: bare number read as years,adult,60,male,extracted field,male,GSE274557:Pt-6,Pt-6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2260,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.49999123105793136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452865,,,train,hesrt,samples/GSE274557/GSM8452865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452866,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",adult,age rule: bare number read as years,adult,60,male,extracted field,male,GSE274557:Pt-6,Pt-6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2660,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.49999899616229193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452866,,,train,hesrt,samples/GSE274557/GSM8452866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452867,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE274557:Pt-7,Pt-7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3954,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000038501323162,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452867,,,train,hesrt,samples/GSE274557/GSM8452867,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452868,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE274557:Pt-7,Pt-7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3435,36601,counts,pixel,0.36234500327489005,platform_constant,True,H&E,0.500003313116337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452868,,,train,hesrt,samples/GSE274557/GSM8452868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452869,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE274557:Pt-7,Pt-7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2731,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999865879944379,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452869,,,train,hesrt,samples/GSE274557/GSM8452869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452870,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE274557:Pt-7,Pt-7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3226,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.500000568265801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452870,,,train,hesrt,samples/GSE274557/GSM8452870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452871,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-8,Pt-8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3952,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000100504532755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452871,,,train,hesrt,samples/GSE274557/GSM8452871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8452872,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-8,Pt-8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2531,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000050510198927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452872,,,train,hesrt,samples/GSE274557/GSM8452872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.9500000000000001}",,
GSM8452873,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-8,Pt-8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2915,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000128514410137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452873,,,train,hesrt,samples/GSE274557/GSM8452873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8452874,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-8,Pt-8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2327,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.500000568265801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452874,,,train,hesrt,samples/GSE274557/GSM8452874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452875,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",adult,age rule: bare number read as years,adult,60,female,extracted field,female,GSE274557:Pt-9,Pt-9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3177,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000149990864193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452875,,,train,hesrt,samples/GSE274557/GSM8452875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452876,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",adult,age rule: bare number read as years,adult,60,female,extracted field,female,GSE274557:Pt-9,Pt-9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2887,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.49999911940979325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452876,,,train,hesrt,samples/GSE274557/GSM8452876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8452877,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",adult,age rule: bare number read as years,adult,60,female,extracted field,female,GSE274557:Pt-9,Pt-9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3271,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999967901893513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452877,,,train,hesrt,samples/GSE274557/GSM8452877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452878,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",adult,age rule: bare number read as years,adult,60,female,extracted field,female,GSE274557:Pt-9,Pt-9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2169,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.5000145114779667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452878,,,train,hesrt,samples/GSE274557/GSM8452878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452879,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",adult,age rule: bare number read as years,adult,64,male,extracted field,male,GSE274557:Pt-10,Pt-10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2225,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000035966630161,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452879,,,train,hesrt,samples/GSE274557/GSM8452879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452880,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",adult,age rule: bare number read as years,adult,64,male,extracted field,male,GSE274557:Pt-10,Pt-10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2686,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000132927400555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452880,,,train,hesrt,samples/GSE274557/GSM8452880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8452881,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",adult,age rule: bare number read as years,adult,64,male,extracted field,male,GSE274557:Pt-10,Pt-10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1873,36601,counts,pixel,0.36363636363636365,platform_constant,True,H&E,0.4999972622691409,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452881,,,train,hesrt,samples/GSE274557/GSM8452881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452882,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",adult,age rule: bare number read as years,adult,64,male,extracted field,male,GSE274557:Pt-10,Pt-10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2008,36601,counts,pixel,0.36225940097871767,platform_constant,True,H&E,0.4999964636307883,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452882,,,train,hesrt,samples/GSE274557/GSM8452882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8452883,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-11,Pt-11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3563,36601,counts,pixel,0.36220236647500226,platform_constant,True,H&E,0.5000070934717877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452883,,,train,hesrt,samples/GSE274557/GSM8452883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452884,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-11,Pt-11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2741,36601,counts,pixel,0.3636339594528438,platform_constant,True,H&E,0.4999995075326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452884,,,train,hesrt,samples/GSE274557/GSM8452884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM8452885,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-11,Pt-11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2635,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.5000138767150525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452885,,,train,hesrt,samples/GSE274557/GSM8452885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8452886,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-11,Pt-11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2845,36601,counts,pixel,0.3634825919587946,platform_constant,True,H&E,0.5000044411668702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452886,,,train,hesrt,samples/GSE274557/GSM8452886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.91}",,
GSM8452887,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,gemcitabine,aged,age rule: bare number read as years,aged,78,female,extracted field,female,GSE274557:Pt-12,Pt-12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2892,36601,counts,pixel,0.36230932827735274,platform_constant,True,H&E,0.5000143475559576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452887,,,train,hesrt,samples/GSE274557/GSM8452887,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452888,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,gemcitabine,aged,age rule: bare number read as years,aged,78,female,extracted field,female,GSE274557:Pt-12,Pt-12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2123,36601,counts,pixel,0.36230932827735274,platform_constant,True,H&E,0.4999907230539818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452888,,,train,hesrt,samples/GSE274557/GSM8452888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452889,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,gemcitabine,aged,age rule: bare number read as years,aged,78,female,extracted field,female,GSE274557:Pt-12,Pt-12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3361,36601,counts,pixel,0.36230932827735274,platform_constant,True,H&E,0.4999907230539818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452889,,,train,hesrt,samples/GSE274557/GSM8452889,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452890,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,gemcitabine,aged,age rule: bare number read as years,aged,78,female,extracted field,female,GSE274557:Pt-12,Pt-12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2696,36601,counts,pixel,0.36223325682025953,platform_constant,True,H&E,0.5000146957989255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452890,,,train,hesrt,samples/GSE274557/GSM8452890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8452891,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3073,36601,counts,pixel,0.362316462433881,platform_constant,True,H&E,0.4999885772321251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452891,,,train,hesrt,samples/GSE274557/GSM8452891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452892,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver metastasis,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2815,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.5000095108155265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452892,,,train,hesrt,samples/GSE274557/GSM8452892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452893,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2622,36601,counts,pixel,0.36231884057971014,platform_constant,True,H&E,0.4999936419356128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452893,,,train,hesrt,samples/GSE274557/GSM8452893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452894,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2160,36601,counts,pixel,0.36223325682025953,platform_constant,True,H&E,0.5000057348416402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452894,,,train,hesrt,samples/GSE274557/GSM8452894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452895,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneal metastasis,metastasis,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2883,36601,counts,pixel,0.36230932827735274,platform_constant,True,H&E,0.5000031942562603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452895,,,train,hesrt,samples/GSE274557/GSM8452895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8714177,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,No treatment,aged,age rule: bare number read as years,aged,89,female,extracted field,female,GSE274557:Pt-3,Pt-3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,444,36601,counts,pixel,0.36442993808207597,platform_constant,True,H&E,0.5000051644949799,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714177,,,train,hesrt,samples/GSE274557/GSM8714177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714178,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",adult,age rule: bare number read as years,adult,60,male,extracted field,male,GSE274557:Pt-6,Pt-6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,660,36601,counts,pixel,0.8308846776785371,platform_constant,True,H&E,0.8308846776785371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714178,,,train,hesrt,samples/GSE274557/GSM8714178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714179,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",adult,age rule: bare number read as years,adult,60,male,extracted field,male,GSE274557:Pt-6,Pt-6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1829,36601,counts,pixel,0.8308846776785371,platform_constant,True,H&E,0.8308846776785371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714179,,,train,hesrt,samples/GSE274557/GSM8714179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714180,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",aged,age rule: bare number read as years,aged,67,male,extracted field,male,GSE274557:Pt-8,Pt-8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1453,36601,counts,pixel,0.3726262461981637,platform_constant,True,H&E,0.49998692982712944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714180,,,train,hesrt,samples/GSE274557/GSM8714180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8714181,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,419,36601,counts,pixel,0.35842293906810035,platform_constant,True,H&E,0.49999099439851585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714181,,,train,hesrt,samples/GSE274557/GSM8714181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714182,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1701,36601,counts,pixel,0.35842293906810035,platform_constant,True,H&E,0.49999099439851585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714182,,,train,hesrt,samples/GSE274557/GSM8714182,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714183,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,PDX for primary PDAC,xenograft,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",adult,age rule: bare number read as years,adult,64,male,extracted field,male,GSE274557:Pt-10,Pt-10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4339,18085,counts,pixel,0.2499617275404812,platform_constant,True,H&E,0.4999957924351921,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714183,,,train,hesrt,samples/GSE274557/GSM8714183,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8714184,GSE274557,GSE274557,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,PDX for primary PDAC,xenograft,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",aged,age rule: bare number read as years,aged,82,female,extracted field,female,GSE274557:Pt-13,Pt-13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2108,18085,counts,pixel,0.24936958011822588,platform_constant,True,H&E,0.49999677407367976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714184,,,train,hesrt,samples/GSE274557/GSM8714184,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8453028,GSE274572,GSE274572,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Plaque section from human aorta,primary tissue,,,disease,luna,atherosclerosis,,adult,age rule: age in years,not stated,54 years,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2329,33538,counts,pixel,4.42231342594175,platform_constant,True,H&E,4.42231342594175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453028,,,train,hesrt,samples/GSE274572/GSM8453028,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453029,GSE274572,GSE274572,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Plaque section from human aorta,primary tissue,,,disease,luna,atherosclerosis,,adult,age rule: age in years,not stated,54 years,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2497,33538,counts,pixel,4.422313425941773,platform_constant,True,H&E,4.422313425941773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453029,,,train,hesrt,samples/GSE274572/GSM8453029,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453030,GSE274572,GSE274572,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Plaque section from human aorta,primary tissue,,,disease,luna,atherosclerosis,,adult,age rule: age in years,not stated,54 years,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2426,33538,counts,pixel,4.422313425941749,platform_constant,True,H&E,4.422313425941749,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453030,,,train,hesrt,samples/GSE274572/GSM8453030,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453031,GSE274572,GSE274572,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Plaque section from human aorta,primary tissue,,,disease,luna,atherosclerosis,,adult,age rule: age in years,not stated,54 years,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2470,33538,counts,pixel,4.4223134259417725,platform_constant,True,H&E,4.4223134259417725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453031,,,train,hesrt,samples/GSE274572/GSM8453031,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453520,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PBS injected_D75,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3907,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.032613753097282,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453520,,,train,sda-all,samples/GSE274605/GSM8453520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM8453521,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PBS injected_D75,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3542,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.006985100846799,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41736854,,GSM8453521,,,train,sda-all,samples/GSE274605/GSM8453521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453522,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PFF injected_D45,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3372,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.061166825449159,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453522,,,train,sda-all,samples/GSE274605/GSM8453522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453523,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PFF injected_D45,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3198,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.044645017166047,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453523,,,train,sda-all,samples/GSE274605/GSM8453523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8453524,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PFF injected_D45,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3018,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.97170824989874,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453524,,,train,sda-all,samples/GSE274605/GSM8453524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453525,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PFF injected_D75,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3627,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.006168434863913,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453525,,,train,sda-all,samples/GSE274605/GSM8453525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453526,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PFF injected_D75,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2954,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.003189915222444,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453526,,,train,sda-all,samples/GSE274605/GSM8453526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8453527,GSE274605,GSE274605,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0000510;MONDO:0005180,synucleinopathy;Parkinson disease,disease,luna,,PFF injected_D75,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2273,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.003272830896644,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453527,,,train,sda-all,samples/GSE274605/GSM8453527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453700,GSE274617,GSE274617,Single cell transcriptomes of pancreatic pre-invasive lesions and cancer reveal acinar metaplastic cells’ heterogeneity [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0004992,cancer,disease,luna,,"PTI, Ptf1a-CreER, LSL-Kras-G12D, LSL-tdTomato",adult,luna,adult,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,392164,228,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41758082,,GSM8453700,,,train,sda-all,samples/GSE274617/GSM8453700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8453748,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,143537,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059084194978,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453748,,,train,sda-all,samples/GSE274623/GSM8453748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453749,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,81284,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999839523154516,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453749,,,train,sda-all,samples/GSE274623/GSM8453749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8453750,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,138417,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051627292252,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453750,,,train,sda-all,samples/GSE274623/GSM8453750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453751,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,46399,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453751,,,train,sda-all,samples/GSE274623/GSM8453751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453752,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,103438,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000144675925925,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453752,,,train,sda-all,samples/GSE274623/GSM8453752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453753,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,164762,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999483556436947,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453753,,,train,sda-all,samples/GSE274623/GSM8453753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8453754,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,81602,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000111968579894,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453754,,,train,sda-all,samples/GSE274623/GSM8453754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453755,GSE274623,GSE274623,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,46807,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011456328476,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453755,,,train,sda-all,samples/GSE274623/GSM8453755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8454077,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,Normal,Patho-DBiT Protocol,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1408,21093,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454077,,,train,sda-all,samples/GSE274641/GSM8454077,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.67, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8454078,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,Normal,Patho-DBiT Protocol,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1369,25201,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454078,,,train,sda-all,samples/GSE274641/GSM8454078,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8454079,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,normal,luna,Normal,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2003,25047,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454079,,,train,sda-all,samples/GSE274641/GSM8454079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8454080,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,Normal,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1455,25104,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454080,,,train,sda-all,samples/GSE274641/GSM8454080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8454081,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,tumour tissue,MONDO:0004928;MONDO:0005062,lymph node disorder;lymphoma,disease,luna,Lymphoma,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2497,26397,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454081,,,train,sda-all,samples/GSE274641/GSM8454081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454082,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,tumour tissue,MONDO:0004928;MONDO:0005062,lymph node disorder;lymphoma,disease,luna,Lymphoma,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,8632,67517,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454082,,,train,sda-all,samples/GSE274641/GSM8454082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454083,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,normal,luna,Normal,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2365,25735,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454083,,,train,sda-all,samples/GSE274641/GSM8454083,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454084,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,tumour tissue,MONDO:0004928;MONDO:0018905,lymph node disorder;diffuse large B-cell lymphoma,disease,luna,Lymphoma,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2116,26147,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454084,,,train,sda-all,samples/GSE274641/GSM8454084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8454085,GSE274641,GSE274641,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,tumour tissue,MONDO:0004928;MONDO:0018905,lymph node disorder;diffuse large B-cell lymphoma,disease,luna,Lymphoma,Patho-DBiT Protocol,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2170,25172,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,39353436,,GSM8454085,,,train,sda-all,samples/GSE274641/GSM8454085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454234,GSE274657+GSE274659,GSE274657,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,JAK1_high,adult,age rule: bare number read as years,adult,60,unknown,not stated,,GSE274657:Patient_2,Patient_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1534,18085,counts,pixel,3.5903003297938754,platform_constant,True,H&E,3.5903003297938754,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454234,,,train,hesrt,samples/GSE274657/GSM8454234,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM8454235,GSE274657+GSE274659,GSE274657,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,JAK1_high,adult,age rule: bare number read as years,adult,58,unknown,not stated,,GSE274657:Patient_8,Patient_8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4116,18085,counts,pixel,4.785282332147371,platform_constant,True,H&E,4.785282332147371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454235,,,train,hesrt,samples/GSE274657/GSM8454235,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8454236,GSE274657+GSE274659,GSE274657,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,JAK1_low,adult,age rule: bare number read as years,adult,43,unknown,not stated,,GSE274657:Patient_16,Patient_16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4592,18085,counts,pixel,7.315563969495602,platform_constant,True,H&E,7.315563969495602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454236,,,train,hesrt,samples/GSE274657/GSM8454236,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8454237,GSE274657+GSE274659,GSE274657,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,ovarian cancer,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,JAK1_low,aged,age rule: bare number read as years,aged,69,unknown,not stated,,GSE274657:Patient_17,Patient_17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,7.315038519907406,platform_constant,True,H&E,7.315038519907406,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454237,,,train,hesrt,samples/GSE274657/GSM8454237,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8454387,GSE246459+GSE274665,GSE274665,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2234,17943,counts,pixel,4.881172164031463,platform_constant,True,H&E,4.881172164031463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454387,,,train,hesrt,samples/GSE274665/GSM8454387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8454388,GSE246459+GSE274665,GSE274665,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4118,17943,counts,pixel,4.875520484156295,platform_constant,True,H&E,4.875520484156295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454388,,,train,hesrt,samples/GSE274665/GSM8454388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8454389,GSE246459+GSE274665,GSE274665,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2932,17943,counts,pixel,4.438143042897383,platform_constant,True,H&E,4.438143042897383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454389,,,train,hesrt,samples/GSE274665/GSM8454389,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454390,GSE246459+GSE274665,GSE274665,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3966,17943,counts,pixel,4.433568913264562,platform_constant,True,H&E,4.433568913264562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454390,,,train,hesrt,samples/GSE274665/GSM8454390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454446,GSE274673,GSE274673,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic ductal adenocarcinoma (PDAC),tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic ductal adenocarcinoma (PDAC),treatment-naïve,not stated,luna,not stated,,unknown,not stated,,GSE274673:Patient 1,Patient 1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,166982,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000125502008033,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454446,,,train,sda-all,samples/GSE274673/GSM8454446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454447,GSE274673,GSE274673,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic ductal adenocarcinoma (PDAC),tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic ductal adenocarcinoma (PDAC),chemoradiotherapy-treated,not stated,luna,not stated,,unknown,not stated,,GSE274673:Patient 2,Patient 2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,97229,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999187063970674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454447,,,train,sda-all,samples/GSE274673/GSM8454447,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454448,GSE274673,GSE274673,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic ductal adenocarcinoma (PDAC),tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic ductal adenocarcinoma (PDAC),chemoradiotherapy-treated,not stated,luna,not stated,,unknown,not stated,,GSE274673:Patient 3,Patient 3,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,28375,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999931394072447,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454448,,,train,sda-all,samples/GSE274673/GSM8454448,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454449,GSE274673,GSE274673,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic ductal adenocarcinoma (PDAC),tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic ductal adenocarcinoma (PDAC),treatment-naïve,not stated,luna,not stated,,unknown,not stated,,GSE274673:Patient 4,Patient 4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,102797,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454449,,,train,sda-all,samples/GSE274673/GSM8454449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454450,GSE274673,GSE274673,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic ductal adenocarcinoma (PDAC),tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic ductal adenocarcinoma (PDAC),treatment-naïve,not stated,luna,not stated,,unknown,not stated,,GSE274673:Patient 5,Patient 5,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,273201,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454450,,,train,sda-all,samples/GSE274673/GSM8454450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454451,GSE274673,GSE274673,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic ductal adenocarcinoma (PDAC),tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic ductal adenocarcinoma (PDAC),chemoradiotherapy-treated,not stated,luna,not stated,,unknown,not stated,,GSE274673:Patient 6,Patient 6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,42116,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454451,,,train,sda-all,samples/GSE274673/GSM8454451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455199,GSE274697,GSE274697,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,GBM,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4180,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.12046255811988,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain has some problems,41559043,,GSM8455199,,,val,sda-all,samples/GSE274697/GSM8455199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455200,GSE274697,GSE274697,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,GBM,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3954,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.261251954141597,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain has some problems,41559043,,GSM8455200,,,val,sda-all,samples/GSE274697/GSM8455200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455201,GSE274697,GSE274697,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,GBM,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4362,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.525835186226113,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain has some problems,41559043,,GSM8455201,,,val,sda-all,samples/GSE274697/GSM8455201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455202,GSE274697,GSE274697,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,GBM+IF,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4019,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.332183001037512,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41559043,,GSM8455202,,,val,sda-all,samples/GSE274697/GSM8455202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455203,GSE274697,GSE274697,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,GBM+IF,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3786,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.6973764882012095,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41559043,,GSM8455203,,,val,sda-all,samples/GSE274697/GSM8455203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455204,GSE274697,GSE274697,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,GBM+IF,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3894,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.568355332286101,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41559043,,GSM8455204,,,val,sda-all,samples/GSE274697/GSM8455204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457566,GSE274767,GSE274767,Spatial Transcriptomics of Lungs Infected with Coccidioides posadasii,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Day 0,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2218,32589,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39611685,10.1128/mbio.02562-24,GSM8457566,,,val,hesrt,samples/GSE274767/GSM8457566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457567,GSE274767,GSE274767,Spatial Transcriptomics of Lungs Infected with Coccidioides posadasii,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Day 14,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3982,32589,counts,pixel,7.1428567857142955,platform_constant,True,H&E,7.1428567857142955,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39611685,10.1128/mbio.02562-24,GSM8457567,,,val,hesrt,samples/GSE274767/GSM8457567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457833,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2349,32285,counts,pixel,4.400262376240797,platform_constant,True,H&E,4.400262376240797,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457833,,,train,hesrt,samples/GSE274782/GSM8457833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8457834,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2162,32285,counts,pixel,4.410406430999422,platform_constant,True,H&E,4.410406430999422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457834,,,train,hesrt,samples/GSE274782/GSM8457834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8457835,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2225,32285,counts,pixel,4.409465345055363,platform_constant,True,H&E,4.409465345055363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457835,,,train,hesrt,samples/GSE274782/GSM8457835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457836,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2257,32285,counts,pixel,4.400262376240819,platform_constant,True,H&E,4.400262376240819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457836,,,train,hesrt,samples/GSE274782/GSM8457836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457837,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1592,32285,counts,pixel,4.342184753681936,platform_constant,True,H&E,4.342184753681936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457837,,,train,hesrt,samples/GSE274782/GSM8457837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457838,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2129,32285,counts,pixel,4.410243883893371,platform_constant,True,H&E,4.410243883893371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457838,,,train,hesrt,samples/GSE274782/GSM8457838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457839,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1871,32285,counts,pixel,4.411493162156672,platform_constant,True,H&E,4.411493162156672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457839,,,train,hesrt,samples/GSE274782/GSM8457839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457840,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2082,32285,counts,pixel,4.409827690667172,platform_constant,True,H&E,4.409827690667172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457840,,,train,hesrt,samples/GSE274782/GSM8457840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457841,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2142,32285,counts,pixel,4.40652784225494,platform_constant,True,H&E,4.40652784225494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457841,,,train,hesrt,samples/GSE274782/GSM8457841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8457842,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,sham,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1609,32285,counts,pixel,4.347282542040089,platform_constant,True,H&E,4.347282542040089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457842,,,train,hesrt,samples/GSE274782/GSM8457842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457843,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,iTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1895,32285,counts,pixel,4.3434191827962705,platform_constant,True,H&E,4.3434191827962705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457843,,,train,hesrt,samples/GSE274782/GSM8457843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8457844,GSE274782,GSE274782,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,cTBS,adult,age rule: age with unit,aged,57–72 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2125,32285,counts,pixel,4.343177555359486,platform_constant,True,H&E,4.343177555359486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457844,,,train,hesrt,samples/GSE274782/GSM8457844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8463210,GSE274970,GSE274970,Morphogenic accommodations for unidirectional airflow in the chicken lung,Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,lung,luna,UBERON:0002048,lung,E20 lung,primary tissue,,,normal,luna,,Leghorn,fetal,luna,fetal,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,315012,27771,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8463210,,,train,sda-all,samples/GSE274970/GSM8463210,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM8464544,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Cx3cr1CreErt2/+(Litt),adult,age rule: age with unit,adult,8 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,112993,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8464544,,,val,sda-all,samples/GSE275026/GSM8464544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8464545,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,Cx3cr1CreErt2/+(Litt); 5xFAD,adult,age rule: age with unit,adult,8 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,120378,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8464545,,,val,sda-all,samples/GSE275026/GSM8464545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8464546,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,Cx3cr1CreErt2/+(Litt); 5xFAD,adult,age rule: age with unit,adult,10 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,103501,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8464546,,,val,sda-all,samples/GSE275026/GSM8464546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8464547,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,5xFAD; Cx3cr1CreErt2/+(Litt);Spi1fl/+,adult,age rule: age with unit,adult,10 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,124048,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8464547,,,val,sda-all,samples/GSE275026/GSM8464547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8464548,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,5xFAD; Cx3cr1CreErt2/+(Litt);R26FLAG-Spi1/+,adult,age rule: age with unit,adult,8 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,113880,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8464548,,,val,sda-all,samples/GSE275026/GSM8464548,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8970742,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Cx3cr1CreErt2/+(Litt),adult,age rule: age with unit,adult,12 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,126024,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8970742,,,val,sda-all,samples/GSE275026/GSM8970742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8970743,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,Cx3cr1CreErt2/+(Litt); 5xFAD,adult,age rule: age with unit,adult,11 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,131251,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8970743,,,val,sda-all,samples/GSE275026/GSM8970743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8970744,GSE275026,GSE275026,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,5xFAD; Cx3cr1CreErt2/+(Litt);Spi1fl/+,adult,age rule: age with unit,adult,13 months,male,extracted field,M,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,120318,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193812,,GSM8970744,,,val,sda-all,samples/GSE275026/GSM8970744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8465980,GSE275125,GSE275125,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1650,32378,counts,pixel,0.6578947368421053,platform_constant,True,H&E,0.6578947368421053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8465980,,,train,hesrt,samples/GSE275125/GSM8465980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8465981,GSE275125,GSE275125,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1876,32378,counts,pixel,0.6578947368421053,platform_constant,True,H&E,0.6578947368421053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8465981,,,train,hesrt,samples/GSE275125/GSM8465981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8465982,GSE275125,GSE275125,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1858,32378,counts,pixel,0.7352941176470589,platform_constant,True,H&E,0.7352941176470589,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8465982,,,train,hesrt,samples/GSE275125/GSM8465982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8465983,GSE275125,GSE275125,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1887,32378,counts,pixel,0.6711409395973155,platform_constant,True,H&E,0.6711409395973155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8465983,,,train,hesrt,samples/GSE275125/GSM8465983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8471249,GSE275131,GSE275131,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control (DMSO; 0.11 ul/hour infusion rate) - WT,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2934,32285,counts,pixel,4.355401436942718,platform_constant,True,H&E,4.355401436942718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471249,,,test,hesrt,samples/GSE275131/GSM8471249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8471250,GSE275131,GSE275131,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,Control (DMSO; 0.11 ul/hour infusion rate) - 3xTg,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3080,32285,counts,pixel,4.761410998503646,platform_constant,True,H&E,4.761410998503646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471250,,,test,hesrt,samples/GSE275131/GSM8471250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8471251,GSE275131,GSE275131,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Stearoyl-CoA desaturase inhibitor (SCDi; 80 uM) - WT,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2789,32285,counts,pixel,4.53387806511062,platform_constant,True,H&E,4.53387806511062,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471251,,,test,hesrt,samples/GSE275131/GSM8471251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8471252,GSE275131,GSE275131,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,Alzheimer's disease,Stearoyl-CoA desaturase inhibitor (SCDi; 80 uM) - 3xTg,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3126,32285,counts,pixel,4.708342708720574,platform_constant,True,H&E,4.708342708720574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471252,,,test,hesrt,samples/GSE275131/GSM8471252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8471388,GSE275144,GSE275144,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0001262,wall of intestine,Intestinal Stricture,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,Intestinal Stricture,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2422,36601,counts,pixel,4.804783733096434,platform_constant,True,H&E,4.804783733096434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967215,,GSM8471388,,,train,hesrt,samples/GSE275144/GSM8471388,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8471389,GSE275144,GSE275144,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0001262,wall of intestine,Intestinal Stricture,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,Intestinal Stricture,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1630,36601,counts,pixel,4.806691810516939,platform_constant,True,H&E,4.806691810516939,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967215,,GSM8471389,,,train,hesrt,samples/GSE275144/GSM8471389,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8472671,GSE275201,GSE275201,Spatial Transcriptomics of Brains Infected with VEEV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Uninfected controls,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2757,32589,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39749347,,GSM8472671,,,val,hesrt,samples/GSE275201/GSM8472671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8472672,GSE275201,GSE275201,Spatial Transcriptomics of Brains Infected with VEEV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Infected with VEEV,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2798,32589,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39749347,,GSM8472672,,,val,hesrt,samples/GSE275201/GSM8472672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8473629,GSE275252,GSE275252,The G Protein-Coupled Receptor ADGRG6 Maintains Mouse Growth Plate Homeostasis by Negatively Regulating IHH Signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002103,hindlimb,hindlimb,primary tissue,,,perturbation,luna,,WT & Adgrg6 mutant,neonatal or infant,age rule: postnatal day,not stated,20 postnatal days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1852,19465,counts,pixel,4.788324088563911,platform_constant,True,H&E,4.788324088563911,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39236220,,GSM8473629,,,train,hesrt,samples/GSE275252/GSM8473629,sda-tissue-disease-2.3,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8476393,GSE275405+GSE275406,GSE275405,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,normal feed,adult,luna,adult,5 Months 7 days,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3645,19465,counts,pixel,14.921828364186497,platform_constant,True,H&E,14.921828364186497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476393,,,train,hesrt,samples/GSE275405/GSM8476393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8476394,GSE275405+GSE275406,GSE275405,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,normal feed,adult,luna,adult,5 Months 7 days,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4047,19465,counts,pixel,8.463687503554567,platform_constant,True,H&E,8.463687503554567,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476394,,,train,hesrt,samples/GSE275405/GSM8476394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8476395,GSE275405+GSE275406,GSE275405,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,doxycycline feed,adult,luna,adult,5 Months 4 days,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3677,19465,counts,pixel,8.911183380186221,platform_constant,True,H&E,8.911183380186221,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476395,,,train,hesrt,samples/GSE275405/GSM8476395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8476396,GSE275405+GSE275406,GSE275405,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0004286,pancreatic intraductal papillary-mucinous neoplasm,disease,luna,,doxycycline feed,adult,luna,adult,5 Months 4 days,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3236,19465,counts,pixel,9.696456075364956,platform_constant,True,H&E,9.696456075364956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476396,,,train,hesrt,samples/GSE275405/GSM8476396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8480469,GSE275590,GSE275590,Novel cell-to-cell communications between macrophages and fibroblasts regulate obesity-induced adipose tissue fibrosis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,luna,UBERON:0014454,visceral abdominal adipose tissue,visceral adipose tissue,primary tissue,,,normal,luna,,"standard diet, 36 weeks",adult,luna,adult,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2334,19465,counts,pixel,4.3625354682456265,platform_constant,True,H&E,4.3625354682456265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40063503,10.2337/db24-0762,GSM8480469,,,train,hesrt,samples/GSE275590/GSM8480469,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM8480470,GSE275590,GSE275590,Novel cell-to-cell communications between macrophages and fibroblasts regulate obesity-induced adipose tissue fibrosis [spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adipose tissue,luna,UBERON:0014454,visceral abdominal adipose tissue,visceral adipose tissue,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,"high-fat diet, 36 weeks",not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3769,19465,counts,pixel,4.278846175240398,platform_constant,True,H&E,4.278846175240398,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40063503,10.2337/db24-0762,GSM8480470,,,train,hesrt,samples/GSE275590/GSM8480470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8488517,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,perturbation,luna,,PLX5622,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11148,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488517,,,train,sda-all,samples/GSE275954/GSM8488517,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488518,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,perturbation,luna,,PLX5622,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,24469,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488518,,,train,sda-all,samples/GSE275954/GSM8488518,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488519,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,perturbation,luna,,PLX5622,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,20449,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488519,,,train,sda-all,samples/GSE275954/GSM8488519,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488520,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,normal,luna,,control food,adult,luna,adult,Adult; 12 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6274,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488520,,,train,sda-all,samples/GSE275954/GSM8488520,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488521,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,normal,luna,,control food,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,4676,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488521,,,train,sda-all,samples/GSE275954/GSM8488521,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488522,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,normal,luna,,control food,adult,luna,adult,Adult; 12 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,865,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488522,,,train,sda-all,samples/GSE275954/GSM8488522,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488523,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,normal,luna,,control food,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,3361,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488523,,,train,sda-all,samples/GSE275954/GSM8488523,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8488524,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,perturbation,luna,,PLX5622,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,4939,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488524,,,train,sda-all,samples/GSE275954/GSM8488524,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488527,GSE275954,GSE275954,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,peripheral nerve,luna,UBERON:0000941,cranial nerve II,Optic Nerves,primary tissue,,,perturbation,luna,,PLX5622,aged,age rule: age with unit,aged,Aging; 24 mounths,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6951,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488527,,,train,sda-all,samples/GSE275954/GSM8488527,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490672,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,MTB,,adult,age rule: bare number read as years,adult,49,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,87095,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490672,,,train,sda-all,samples/GSE276083/GSM8490672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490673,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,NTM,,aged,age rule: bare number read as years,aged,71,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,39986,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490673,,,train,sda-all,samples/GSE276083/GSM8490673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490674,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,NTM,,adult,age rule: bare number read as years,adult,51,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,39571,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490674,,,train,sda-all,samples/GSE276083/GSM8490674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490675,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,MTB,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,49910,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490675,,,train,sda-all,samples/GSE276083/GSM8490675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490676,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,MTB,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,45717,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490676,,,train,sda-all,samples/GSE276083/GSM8490676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490677,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,NTM,,adult,age rule: bare number read as years,adult,56,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,62491,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490677,,,train,sda-all,samples/GSE276083/GSM8490677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490678,GSE276083,GSE276083,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,mycobacteria-infected lung tissue,primary tissue,MONDO:0020590,mycobacterial infectious disease,disease,luna,NTM,,adult,age rule: bare number read as years,adult,63,female,extracted field,F,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,52676,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490678,,,train,sda-all,samples/GSE276083/GSM8490678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8494455,GSE276273,GSE276273,Mouse Skin Xenium In Situ Spatial Gene Expression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,disease,luna,,MmuPV1,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,295245,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999137415466705,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,39672169,,GSM8494455,,,train,sda-all,samples/GSE276273/GSM8494455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8500534,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3384,17943,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.319136050715769,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500534,,,train,sda-all,samples/GSE276542/GSM8500534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8500535,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3318,17943,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.323414332541781,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500535,,,train,sda-all,samples/GSE276542/GSM8500535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.32, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8500536,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL biopsies,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1197,17943,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.324173730530275,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500536,,,train,sda-all,samples/GSE276542/GSM8500536,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500537,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL biopsies,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1723,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.502847217991357,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500537,,,train,sda-all,samples/GSE276542/GSM8500537,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500538,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL biopsies,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1827,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8206545925621067,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500538,,,train,sda-all,samples/GSE276542/GSM8500538,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500539,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL resection,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.004534803968728,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500539,,,train,sda-all,samples/GSE276542/GSM8500539,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500540,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL resection,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.923332635762713,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500540,,,train,sda-all,samples/GSE276542/GSM8500540,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500541,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,tumour tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4674,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.912354148114175,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500541,,,train,sda-all,samples/GSE276542/GSM8500541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8500542,GSE276542,GSE276542,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,MONDO:0018905;MONDO:0968974,diffuse large B-cell lymphoma;large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4923,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8665118377579377,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500542,,,train,sda-all,samples/GSE276542/GSM8500542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8506649,GSE276841,GSE276841,Distinct Myeloid Derived Suppressor Cell Populations in Human Glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4501,18085,counts,pixel,10.012246384262355,platform_constant,True,H&E,10.012246384262355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39818911,,GSM8506649,,,train,hesrt,samples/GSE276841/GSM8506649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8506650,GSE276841,GSE276841,Distinct Myeloid Derived Suppressor Cell Populations in Human Glioblastoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3128,18085,counts,pixel,11.727189033715637,platform_constant,True,H&E,11.727189033715637,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39818911,,GSM8506650,,,train,hesrt,samples/GSE276841/GSM8506650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8507225,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,Proximal Small Intestine,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4975,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507225,,,test,sda-all,samples/GSE276866/GSM8507225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8507226,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4973,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507226,,,test,sda-all,samples/GSE276866/GSM8507226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8507227,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0000059,large intestine,Large Intestine,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4810,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507227,,,test,sda-all,samples/GSE276866/GSM8507227,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8507228,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001153,caecum,Cecum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4887,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507228,,,test,sda-all,samples/GSE276866/GSM8507228,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8507229,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,Proximal Small Intestine,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507229,,,test,sda-all,samples/GSE276866/GSM8507229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8507230,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4986,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507230,,,test,sda-all,samples/GSE276866/GSM8507230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8507231,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0000059,large intestine,Large Intestine,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507231,,,test,sda-all,samples/GSE276866/GSM8507231,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8507232,GSE276866,GSE276866,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001153,caecum,Cecum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4966,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507232,,,test,sda-all,samples/GSE276866/GSM8507232,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.85, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8509590,GSE276934,GSE276934,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,pulmonary fibrosis,not stated,luna,not stated,,unknown,not stated,,GSE276934:IPFTMA5,IPFTMA5,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,702244,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8509590,,,train,hesrt,samples/GSE276934/GSM8509590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513009,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,7 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,640,36601,counts,pixel,4.2980061799351175,platform_constant,True,H&E,4.2980061799351175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513009,,,test,hesrt,samples/GSE277032/GSM8513009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8513010,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,7 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,749,36601,counts,pixel,4.133773034117596,platform_constant,True,H&E,4.133773034117596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513010,,,test,hesrt,samples/GSE277032/GSM8513010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM8513011,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,7 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,927,36601,counts,pixel,4.2745233740896,platform_constant,True,H&E,4.2745233740896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513011,,,test,hesrt,samples/GSE277032/GSM8513011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8513012,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2102,36601,counts,pixel,4.20578992269273,platform_constant,True,H&E,4.20578992269273,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513012,,,test,hesrt,samples/GSE277032/GSM8513012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513013,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2551,36601,counts,pixel,4.210422014328904,platform_constant,True,H&E,4.210422014328904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513013,,,test,hesrt,samples/GSE277032/GSM8513013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513014,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1370,36601,counts,pixel,4.580458960995122,platform_constant,True,H&E,4.580458960995122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513014,,,test,hesrt,samples/GSE277032/GSM8513014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8513015,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1346,36601,counts,pixel,4.082835485310435,platform_constant,True,H&E,4.082835485310435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513015,,,test,hesrt,samples/GSE277032/GSM8513015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513016,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3073,36601,counts,pixel,4.3200378724777,platform_constant,True,H&E,4.3200378724777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513016,,,test,hesrt,samples/GSE277032/GSM8513016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8513017,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3311,36601,counts,pixel,4.924653079772385,platform_constant,True,H&E,4.924653079772385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513017,,,test,hesrt,samples/GSE277032/GSM8513017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513018,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,17 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1943,36601,counts,pixel,4.354221582762383,platform_constant,True,H&E,4.354221582762383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513018,,,test,hesrt,samples/GSE277032/GSM8513018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8513019,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,17 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2715,36601,counts,pixel,4.52056468492128,platform_constant,True,H&E,4.52056468492128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513019,,,test,hesrt,samples/GSE277032/GSM8513019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513020,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,brain,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,17 post-conception weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3753,36601,counts,pixel,4.866341790056128,platform_constant,True,H&E,4.866341790056128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513020,,,test,hesrt,samples/GSE277032/GSM8513020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8513021,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,uberon_chain,UBERON:0001891,midbrain,Organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,696,36601,counts,pixel,4.1531516660179015,platform_constant,True,H&E,4.1531516660179015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513021,,,test,hesrt,samples/GSE277032/GSM8513021,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8513022,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,uberon_chain,UBERON:0001891,midbrain,Organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,706,36601,counts,pixel,4.315831001641358,platform_constant,True,H&E,4.315831001641358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513022,,,test,hesrt,samples/GSE277032/GSM8513022,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8513023,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,uberon_chain,UBERON:0001891,midbrain,Organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,873,36601,counts,pixel,4.346291035436473,platform_constant,True,H&E,4.346291035436473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513023,,,test,hesrt,samples/GSE277032/GSM8513023,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8513024,GSE277032,GSE277032,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,uberon_chain,UBERON:0001891,midbrain,Organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1060,36601,counts,pixel,4.416343423342886,platform_constant,True,H&E,4.416343423342886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513024,,,test,hesrt,samples/GSE277032/GSM8513024,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8514376,GSE277106,GSE277106,10X Visium Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,control diet,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3894,19465,counts,pixel,10.868819514522844,platform_constant,True,H&E,10.868819514522844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41616823,,GSM8514376,,,train,hesrt,samples/GSE277106/GSM8514376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514377,GSE277106,GSE277106,10X Visium Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,perturbation,luna,,stearic acid-rich HFD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3952,19465,counts,pixel,10.364900458092938,platform_constant,True,H&E,10.364900458092938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41616823,,GSM8514377,,,train,hesrt,samples/GSE277106/GSM8514377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514529,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,pancreas,metastasis,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response R, tissue subtype lymph node",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1813,17943,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514529,,,test,hesrt,samples/GSE277116/GSM8514529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514530,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response R, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2553,17943,counts,pixel,7.388715480837969,platform_constant,True,H&E,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514530,,,test,hesrt,samples/GSE277116/GSM8514530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514531,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,pancreas,metastasis,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype lymph node",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2922,17943,counts,pixel,7.388715480837969,platform_constant,True,H&E,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514531,,,test,hesrt,samples/GSE277116/GSM8514531,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514532,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2613,17943,counts,pixel,7.388715480837969,platform_constant,True,H&E,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514532,,,test,hesrt,samples/GSE277116/GSM8514532,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514533,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response R, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3250,17943,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514533,,,test,hesrt,samples/GSE277116/GSM8514533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514534,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2929,17943,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514534,,,test,hesrt,samples/GSE277116/GSM8514534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514535,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,17943,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514535,,,test,hesrt,samples/GSE277116/GSM8514535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514536,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3320,17943,counts,pixel,7.680000196607982,platform_constant,True,H&E,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514536,,,test,hesrt,samples/GSE277116/GSM8514536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514537,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response R, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3134,17943,counts,pixel,7.680000196607982,platform_constant,True,H&E,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514537,,,test,hesrt,samples/GSE277116/GSM8514537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514538,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,pancreas,metastasis,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype lymph node",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,17943,counts,pixel,7.680000196607982,platform_constant,True,H&E,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514538,,,test,hesrt,samples/GSE277116/GSM8514538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514539,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype Tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3024,17943,counts,pixel,7.680000196607982,platform_constant,True,H&E,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514539,,,test,hesrt,samples/GSE277116/GSM8514539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514540,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,pancreas,metastasis,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype lymph node",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2608,17943,counts,pixel,7.388715480837969,platform_constant,True,H&E,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514540,,,test,hesrt,samples/GSE277116/GSM8514540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514541,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2997,36601,counts,pixel,7.836734894497891,platform_constant,True,H&E,7.836734894497891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514541,,,test,hesrt,samples/GSE277116/GSM8514541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514542,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2235,36601,counts,pixel,7.836734894497961,platform_constant,True,H&E,7.836734894497961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514542,,,test,hesrt,samples/GSE277116/GSM8514542,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514543,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1324,36601,counts,pixel,7.836734894497961,platform_constant,True,H&E,7.836734894497961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514543,,,test,hesrt,samples/GSE277116/GSM8514543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514544,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1699,36601,counts,pixel,7.836734894497961,platform_constant,True,H&E,7.836734894497961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514544,,,test,hesrt,samples/GSE277116/GSM8514544,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514545,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,pancreas,metastasis,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype lymph node",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2317,36601,counts,pixel,8.000000204800022,platform_constant,True,H&E,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514545,,,test,hesrt,samples/GSE277116/GSM8514545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514546,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1693,36601,counts,pixel,8.000000204800022,platform_constant,True,H&E,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514546,,,test,hesrt,samples/GSE277116/GSM8514546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514547,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2499,36601,counts,pixel,8.000000204800022,platform_constant,True,H&E,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514547,,,test,hesrt,samples/GSE277116/GSM8514547,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514548,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3423,36601,counts,pixel,8.000000204800022,platform_constant,True,H&E,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514548,,,test,hesrt,samples/GSE277116/GSM8514548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514549,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2467,36601,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514549,,,test,hesrt,samples/GSE277116/GSM8514549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514550,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1458,36601,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514550,,,test,hesrt,samples/GSE277116/GSM8514550,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514551,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2973,36601,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514551,,,test,hesrt,samples/GSE277116/GSM8514551,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514552,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1938,36601,counts,pixel,7.529411957458852,platform_constant,True,H&E,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514552,,,test,hesrt,samples/GSE277116/GSM8514552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514553,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1450,36601,counts,pixel,7.388715480837969,platform_constant,True,H&E,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514553,,,test,hesrt,samples/GSE277116/GSM8514553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514554,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2870,36601,counts,pixel,7.68000019660805,platform_constant,True,H&E,7.68000019660805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514554,,,test,hesrt,samples/GSE277116/GSM8514554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514555,GSE277116,GSE277116,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2814,36601,counts,pixel,7.68000019660805,platform_constant,True,H&E,7.68000019660805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514555,,,test,hesrt,samples/GSE277116/GSM8514555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8516367,GSE277196,GSE277196,"High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [Ileum, without in situ Polyadenylation]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,bin,5043205,56973,unknown,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,41792309,,GSM8516367,,,val,sda-all,samples/GSE277196/GSM8516367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8516368,GSE277197,GSE277197,"High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [Ileum, with in situ Polyadenylation]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,13 weeks,male,extracted field,male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,bin,7242576,56953,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,41792309,,GSM8516368,,,train,sda-all,samples/GSE277197/GSM8516368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8517079,GSE277246,GSE277246,Spatial transcriptomics revealed that S1pr2 deletion in keratinocytes increases the MyD88/NF-kB pathway and psoriasis-related cytokine expression in the epidermis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005083,psoriasis,disease,luna,psoriasis,"S1pr2 f/f, IMQ",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1282,19465,counts,pixel,3.811423091856056,platform_constant,True,H&E,3.811423091856056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39391307,,GSM8517079,,,train,hesrt,samples/GSE277246/GSM8517079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8517080,GSE277246,GSE277246,Spatial transcriptomics revealed that S1pr2 deletion in keratinocytes increases the MyD88/NF-kB pathway and psoriasis-related cytokine expression in the epidermis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005083,psoriasis,disease,luna,psoriasis,"S1pr2 f/f K14-Cre, IMQ",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,981,19465,counts,pixel,2.813685675543849,platform_constant,True,H&E,2.813685675543849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39391307,,GSM8517080,,,train,hesrt,samples/GSE277246/GSM8517080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.55, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8517210,GSE277255,GSE277255,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [STOmics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,ApcMin/+,adult,age rule: age with unit,adult,17 weeks,female,extracted field,female,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,spot,4128637,56973,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8517210,,,val,sda-all,samples/GSE277255/GSM8517210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8521495,GSE277387,GSE277387,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Perianal Fistula,primary tissue,MONDO:0005011,Crohn disease,disease,luna,IPF,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12803,18085,counts,um,1.0,verified,True,H&E-like (heuristic),8.606406991662693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521495,,,train,sda-all,samples/GSE277387/GSM8521495,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8521496,GSE277387,GSE277387,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Perianal Fistula,primary tissue,MONDO:0005011,Crohn disease,disease,luna,IPF,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2076,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.963232631713117,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521496,,,train,sda-all,samples/GSE277387/GSM8521496,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8521497,GSE277387,GSE277387,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Perianal Fistula,primary tissue,MONDO:0005011,Crohn disease,disease,luna,IPF,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1890,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.508689293591487,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521497,,,train,sda-all,samples/GSE277387/GSM8521497,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8521498,GSE277387,GSE277387,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Perianal Fistula,primary tissue,MONDO:0005011,Crohn disease,disease,luna,PCD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7290,18085,counts,um,1.0,verified,False,,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,"half of the H&E image is missing, so some spots are not aligned",40608410,,GSM8521498,,,train,sda-all,samples/GSE277387/GSM8521498,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8521499,GSE277387,GSE277387,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Perianal Fistula,primary tissue,MONDO:0005011,Crohn disease,disease,luna,PCD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1376,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.943920133971536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521499,,,train,sda-all,samples/GSE277387/GSM8521499,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8521500,GSE277387,GSE277387,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Perianal Fistula,primary tissue,MONDO:0005011,Crohn disease,disease,luna,PCD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1791,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.503632123473542,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521500,,,train,sda-all,samples/GSE277387/GSM8521500,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8522533,GSE277441,GSE277441,Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,blood vessel,luna,UBERON:0001621,coronary artery,coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,Mild,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7207,1178,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8522533,,,train,sda-all,samples/GSE277441/GSM8522533,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8522534,GSE277441,GSE277441,Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,blood vessel,luna,UBERON:0001621,coronary artery,coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,Moderate,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,19050,1178,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8522534,,,train,sda-all,samples/GSE277441/GSM8522534,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522535,GSE277441,GSE277441,Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,blood vessel,luna,UBERON:0001621,coronary artery,coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,Severe,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,53439,1178,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8522535,,,train,sda-all,samples/GSE277441/GSM8522535,sda-tissue-disease-2.5,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522749,GSE277463,GSE277463,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54878,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522749,,,train,sda-all,samples/GSE277463/GSM8522749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522750,GSE277463,GSE277463,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47443,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522750,,,train,sda-all,samples/GSE277463/GSM8522750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522751,GSE277463,GSE277463,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50508,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522751,,,train,sda-all,samples/GSE277463/GSM8522751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8522752,GSE277463,GSE277463,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,5xFAD,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,53020,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522752,,,train,sda-all,samples/GSE277463/GSM8522752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8522753,GSE277463,GSE277463,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,5xFAD,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51513,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522753,,,train,sda-all,samples/GSE277463/GSM8522753,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8522754,GSE277463,GSE277463,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,5xFAD,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45788,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522754,,,train,sda-all,samples/GSE277463/GSM8522754,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8524871,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,(NBH) Non-infectious Brain Homogenate,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3183,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.889126809466556,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524871,,,train,sda-all,samples/GSE277577/GSM8524871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM8524872,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005429,prion disease,disease,luna,,(RML6) Prion-containing brain homogenate,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2400,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.890975171347878,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524872,,,train,sda-all,samples/GSE277577/GSM8524872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8524873,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005429,prion disease,disease,luna,,(RML6) Prion-containing brain homogenate,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2857,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.892736750499913,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524873,,,train,sda-all,samples/GSE277577/GSM8524873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8524874,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,(NBH) Non-infectious Brain Homogenate,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2787,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.888090154837266,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524874,,,train,sda-all,samples/GSE277577/GSM8524874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8524875,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,(NBH) Non-infectious Brain Homogenate,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2725,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.076473409072862,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524875,,,train,sda-all,samples/GSE277577/GSM8524875,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8524879,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,(NBH) Non-infectious Brain Homogenate,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2678,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.886224719076924,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524879,,,train,sda-all,samples/GSE277577/GSM8524879,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8524880,GSE277577,GSE277577,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005429,prion disease,disease,luna,,(RML6) Prion-containing brain homogenate,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2071,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.0847591782892305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524880,,,train,sda-all,samples/GSE277577/GSM8524880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.74}",,
GSM8534862,GSE277936,GSE277936,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,fixed frozen mouse lung section,primary tissue,,,normal,luna,,littermate Egln1f/f (WT) control,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse Tissue Atlassing Gene Expression,xenium-2.0.0.10,cell,89453,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998842235257784,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8534862,,,train,sda-all,samples/GSE277936/GSM8534862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8534863,GSE277936,GSE277936,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,littermate Egln1f/f (WT) control,adult,age rule: age with unit,not stated,2–3.5 months,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,39594,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8534863,,,train,hesrt,samples/GSE277936/GSM8534863,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8534864,GSE277936,GSE277936,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,fixed frozen mouse lung section,primary tissue,MONDO:0005149,pulmonary hypertension,disease,luna,,Egln1Tie2Cre (KO),not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse Tissue Atlassing Gene Expression,xenium-2.0.0.10,cell,87805,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998709477596526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8534864,,,train,sda-all,samples/GSE277936/GSM8534864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8534865,GSE277936,GSE277936,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,fixed frozen mouse lung section,primary tissue,MONDO:0005149,pulmonary hypertension,disease,luna,,Egln1Tie2Cre (KO),not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse Tissue Atlassing Gene Expression,xenium-2.0.0.10,cell,83996,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000257785110332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8534865,,,train,sda-all,samples/GSE277936/GSM8534865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8540632,GSE278133,GSE278133,Defective ventral neurogenesis due to midfetal Chd8 mutation drives autistic-like behavior in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,,adult,luna,adult,8 weeks of age,male,extracted field,Male,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,58826,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42203765,,GSM8540632,,,test,sda-all,samples/GSE278133/GSM8540632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8541068,GSE278169,GSE278169,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,unwounded control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1427,32285,counts,pixel,4.363613416336368,platform_constant,True,H&E,4.363613416336368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541068,,,train,hesrt,samples/GSE278169/GSM8541068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8541070,GSE278169,GSE278169,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,Day 12 post wound,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,926,32285,counts,pixel,4.3685750439848,platform_constant,True,H&E,4.3685750439848,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541070,,,train,hesrt,samples/GSE278169/GSM8541070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.5, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM8541072,GSE278169,GSE278169,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,normal,luna,,Day 21 post wound,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,557,32285,counts,pixel,4.8044020574519575,platform_constant,True,H&E,4.8044020574519575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541072,,,train,hesrt,samples/GSE278169/GSM8541072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.37, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8541073,GSE278169,GSE278169,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,Day 21 post wound,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,389,32285,counts,pixel,4.806348247466097,platform_constant,True,H&E,4.806348247466097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541073,,,train,hesrt,samples/GSE278169/GSM8541073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.44, ""life_stage"": 0.92}",disease_status;uberon,low_confidence_annotation
GSM8541074,GSE278169,GSE278169,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,Day 28 post wound,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,586,32285,counts,pixel,4.810126594611027,platform_constant,True,H&E,4.810126594611027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541074,,,train,hesrt,samples/GSE278169/GSM8541074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.44, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM8546115,GSE278415,GSE278415,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor-inoculated model,xenograft,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,Day 11 Vehicle,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3193,32589,counts,um,1.0,verified,True,H&E-like (heuristic),6.98562844305167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546115,,,train,sda-all,samples/GSE278415/GSM8546115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8546116,GSE278415,GSE278415,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor-inoculated model,xenograft,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,Day 11 Vehicle,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3488,32589,counts,um,1.0,verified,True,H&E-like (heuristic),6.933369534830865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546116,,,train,sda-all,samples/GSE278415/GSM8546116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8546117,GSE278415,GSE278415,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor-inoculated model,xenograft,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,Day 11 TREAT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3352,32589,counts,um,1.0,verified,True,H&E-like (heuristic),6.973815141085579,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546117,,,train,sda-all,samples/GSE278415/GSM8546117,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.43, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8546118,GSE278415,GSE278415,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain tumor-inoculated model,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,Day 11 TREAT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3013,32589,counts,um,1.0,verified,True,H&E-like (heuristic),6.924013160591855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546118,,,train,sda-all,samples/GSE278415/GSM8546118,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.4, ""disease_status"": 0.88, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8546224,GSE278431,GSE278431,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001068,skin of back,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,primary tissue,,,perturbation,luna,,Rnaseltm1Slvm,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,32760,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999836477554392,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546224,,,train,sda-all,samples/GSE278431/GSM8546224,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8546225,GSE278431,GSE278431,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001068,skin of back,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,primary tissue,,,perturbation,luna,,Rnaseltm1Slvm,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,30901,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948282995449,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546225,,,train,sda-all,samples/GSE278431/GSM8546225,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8546226,GSE278431,GSE278431,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001068,skin of back,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,primary tissue,,,perturbation,luna,,Rnaseltm1Slvm,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,18612,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999927632123067,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546226,,,train,sda-all,samples/GSE278431/GSM8546226,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8546227,GSE278431,GSE278431,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001068,skin of back,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,primary tissue,,,perturbation,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,24144,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999896753944,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546227,,,train,sda-all,samples/GSE278431/GSM8546227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8546228,GSE278431,GSE278431,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001068,skin of back,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,primary tissue,,,perturbation,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,16368,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000084472142964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546228,,,train,sda-all,samples/GSE278431/GSM8546228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8546229,GSE278431,GSE278431,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001068,skin of back,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,primary tissue,,,perturbation,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,19985,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000121969526383,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546229,,,train,sda-all,samples/GSE278431/GSM8546229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9046243,GSE278603,GSE278603,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,WT,embryonic,age rule: embryonic day,embryonic,E7.5,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,13168,17172,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9046243,,,train,sda-all,samples/GSE278603/GSM9046243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046244,GSE278603,GSE278603,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,WT,embryonic,age rule: embryonic day,embryonic,E7.5,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,8190,16364,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9046244,,,train,sda-all,samples/GSE278603/GSM9046244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046245,GSE278603,GSE278603,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,WT,embryonic,age rule: embryonic day,embryonic,E7.75,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,20935,18455,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9046245,,,train,sda-all,samples/GSE278603/GSM9046245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046246,GSE278603,GSE278603,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,WT,embryonic,age rule: embryonic day,embryonic,E7.75,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,23736,18790,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9046246,,,train,sda-all,samples/GSE278603/GSM9046246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046247,GSE278603,GSE278603,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,WT,embryonic,age rule: embryonic day,embryonic,E8.0,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,11048,16636,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9046247,,,train,sda-all,samples/GSE278603/GSM9046247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046248,GSE278603,GSE278603,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,WT,embryonic,age rule: embryonic day,embryonic,E8.0,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,27266,19046,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9046248,,,train,sda-all,samples/GSE278603/GSM9046248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8551250,GSE278611,GSE278611,Clearance of p21-highly-expressing senescent cells accelerates wound healing,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,dorsal cutaneous skin wound,primary tissue,,,perturbation,luna,,"tamoxifen, 6 doses",not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_100g,xenium-1.7.1.0,cell,332833,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999852402881095,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39537987,,GSM8551250,,,val,sda-all,samples/GSE278611/GSM8551250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.71, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8551262,GSE278614,GSE278614,Single-Cell Spatial Mapping of Human Kidney Development Reveals Cellular Niches and Lineage Dynamics [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Fetal Kidney,primary tissue,,,normal,luna,,,fetal,luna,fetal,18w5d,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,230538,995,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42533102,,GSM8551262,,,test,sda-all,samples/GSE278614/GSM8551262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8551263,GSE278614,GSE278614,Single-Cell Spatial Mapping of Human Kidney Development Reveals Cellular Niches and Lineage Dynamics [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Fetal Kidney,primary tissue,,,normal,luna,,,fetal,luna,fetal,15w6d,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,127023,995,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42533102,,GSM8551263,,,test,sda-all,samples/GSE278614/GSM8551263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8551264,GSE278614,GSE278614,Single-Cell Spatial Mapping of Human Kidney Development Reveals Cellular Niches and Lineage Dynamics [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Fetal Kidney,primary tissue,,,normal,luna,,,fetal,luna,fetal,19w0d,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,118197,995,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42533102,,GSM8551264,,,test,sda-all,samples/GSE278614/GSM8551264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8551438,GSE278621,GSE278621,Spatial transcriptome profile of liver tissue from a patient with metabolic dysfunction-associated steatotic liver disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,Metabolic dysfunction-associated steatotic liver disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3738,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.786319673502356,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42329773,,GSM8551438,,,train,sda-all,samples/GSE278621/GSM8551438,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552410,GSE278662,GSE278662,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,non-ALD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,2940,37117,counts,pixel,4.1107843304769345,platform_constant,True,H&E,4.1107843304769345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-9da209a12422,library_alias,GSM8552414,train,hesrt,samples/GSE278662/GSM8552410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8552411,GSE278662,GSE278662,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,non-ALD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,3774,37117,counts,pixel,3.9468032922713587,platform_constant,True,H&E,3.9468032922713587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-534189bba4e9,library_alias,GSM8552415,train,hesrt,samples/GSE278662/GSM8552411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552412,GSE278662,GSE278662,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0002251,hepatitis,disease,luna,alcohol-associated hepatitis,AH,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,3947,37117,counts,pixel,4.690671941871225,platform_constant,True,H&E,4.690671941871225,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-c786341f7290,library_alias,GSM8552416,train,hesrt,samples/GSE278662/GSM8552412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8552413,GSE278662,GSE278662,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0002251,hepatitis,disease,luna,alcohol-associated hepatitis,AH,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist,,,spot,3352,37117,counts,pixel,3.6783941301507395,platform_constant,True,H&E,3.6783941301507395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-10014ebce83b,library_alias,GSM8552417,train,hesrt,samples/GSE278662/GSM8552413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8552940,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4351,17943,counts,pixel,3.9924453479905457,platform_constant,True,H&E,3.9924453479905457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552940,,,train,hesrt,samples/GSE278694/GSM8552940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552941,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1389,36601,counts,pixel,3.965247517586142,platform_constant,True,H&E,3.965247517586142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552941,,,train,hesrt,samples/GSE278694/GSM8552941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8552942,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4579,36601,counts,pixel,4.38409344544115,platform_constant,True,H&E,4.38409344544115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552942,,,train,hesrt,samples/GSE278694/GSM8552942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552943,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2276,17943,counts,pixel,4.137362538727917,platform_constant,True,H&E,4.137362538727917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552943,,,train,hesrt,samples/GSE278694/GSM8552943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552944,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3088,36601,counts,pixel,3.9523351479784625,platform_constant,True,H&E,3.9523351479784625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552944,,,train,hesrt,samples/GSE278694/GSM8552944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552945,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2247,17943,counts,pixel,3.9875000359273876,platform_constant,True,H&E,3.9875000359273876,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552945,,,train,hesrt,samples/GSE278694/GSM8552945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552946,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,4.156992658426844,platform_constant,True,H&E,4.156992658426844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552946,,,train,hesrt,samples/GSE278694/GSM8552946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552947,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2580,17943,counts,pixel,4.022390291239577,platform_constant,True,H&E,4.022390291239577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552947,,,train,hesrt,samples/GSE278694/GSM8552947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552948,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2677,36601,counts,pixel,3.9162090297059153,platform_constant,True,H&E,3.9162090297059153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552948,,,train,hesrt,samples/GSE278694/GSM8552948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552949,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1824,36601,counts,pixel,3.906456089974096,platform_constant,True,H&E,3.906456089974096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552949,,,train,hesrt,samples/GSE278694/GSM8552949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552950,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4990,18085,counts,pixel,3.8980887098282313,platform_constant,True,H&E,3.8980887098282313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552950,,,train,hesrt,samples/GSE278694/GSM8552950,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552951,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4855,18085,counts,pixel,3.9838787977999606,platform_constant,True,H&E,3.9838787977999606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552951,,,train,hesrt,samples/GSE278694/GSM8552951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552952,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4325,18085,counts,pixel,4.1464770449210535,platform_constant,True,H&E,4.1464770449210535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552952,,,train,hesrt,samples/GSE278694/GSM8552952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552953,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4322,18085,counts,pixel,4.1690117447806285,platform_constant,True,H&E,4.1690117447806285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552953,,,train,hesrt,samples/GSE278694/GSM8552953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552954,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4701,18085,counts,pixel,3.8416780286341714,platform_constant,True,H&E,3.8416780286341714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552954,,,train,hesrt,samples/GSE278694/GSM8552954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552955,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,3.9086379713019688,platform_constant,True,H&E,3.9086379713019688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552955,,,train,hesrt,samples/GSE278694/GSM8552955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552956,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4851,18085,counts,pixel,3.8412266937343613,platform_constant,True,H&E,3.8412266937343613,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552956,,,train,hesrt,samples/GSE278694/GSM8552956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552957,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4012,18085,counts,pixel,3.898045768064406,platform_constant,True,H&E,3.898045768064406,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552957,,,train,hesrt,samples/GSE278694/GSM8552957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552958,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4980,18085,counts,pixel,3.841508759403753,platform_constant,True,H&E,3.841508759403753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552958,,,train,hesrt,samples/GSE278694/GSM8552958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552959,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4823,18085,counts,pixel,3.8312954188176596,platform_constant,True,H&E,3.8312954188176596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552959,,,train,hesrt,samples/GSE278694/GSM8552959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552960,GSE278694,GSE278694,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,3.897974201611597,platform_constant,True,H&E,3.897974201611597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552960,,,train,hesrt,samples/GSE278694/GSM8552960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8554642,GSE278766,GSE278766,Comparison of CosMx and GeoMx profiling performed on the same human kidney tissues [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,human kidney tissues,tumour tissue,MONDO:0021163,kidney neoplasm,disease,luna,kidney tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,283682,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40311874,,GSM8554642,,,train,sda-all,samples/GSE278766/GSM8554642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8555878,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9830,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555878,,,test,sda-all,samples/GSE278848/GSM8555878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555879,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9995,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555879,,,test,sda-all,samples/GSE278848/GSM8555879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555880,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11199,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555880,,,test,sda-all,samples/GSE278848/GSM8555880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555881,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12531,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555881,,,test,sda-all,samples/GSE278848/GSM8555881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555882,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9314,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555882,,,test,sda-all,samples/GSE278848/GSM8555882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555883,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10547,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555883,,,test,sda-all,samples/GSE278848/GSM8555883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555884,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9565,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555884,,,test,sda-all,samples/GSE278848/GSM8555884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8555885,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5970,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555885,,,test,sda-all,samples/GSE278848/GSM8555885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8555886,GSE278848,GSE278848,Visium Spatial Transcriptomics of the Human Hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8402,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39910307,,GSM8555886,,,test,sda-all,samples/GSE278848/GSM8555886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8557976,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Benign primary prostate tumor, Patient sample",primary tissue,MONDO:0010811,benign prostatic hyperplasia,disease,luna,benign prostatic hyperplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4199,33538,counts,pixel,5.153982201928492,platform_constant,True,H&E,5.153982201928492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557976,,,train,hesrt,samples/GSE278936/GSM8557976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.63, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8557977,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Benign primary prostate tumor, Patient sample",primary tissue,MONDO:0010811,benign prostatic hyperplasia,disease,luna,benign prostatic hyperplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1317,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557977,,,train,hesrt,samples/GSE278936/GSM8557977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.52, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8557978,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Benign primary prostate tumor, Patient sample",primary tissue,MONDO:0010811,benign prostatic hyperplasia,disease,luna,benign prostatic hyperplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2030,33538,counts,pixel,4.757521989921981,platform_constant,True,H&E,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557978,,,train,hesrt,samples/GSE278936/GSM8557978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.63, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8557979,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Benign primary prostate tumor, Patient sample",primary tissue,MONDO:0010811,benign prostatic hyperplasia,disease,luna,benign prostatic hyperplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3841,33538,counts,pixel,4.75747541763628,platform_constant,True,H&E,4.75747541763628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557979,,,train,hesrt,samples/GSE278936/GSM8557979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.36, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8557980,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3937,33538,counts,pixel,5.1539317486185015,platform_constant,True,H&E,5.1539317486185015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557980,,,train,hesrt,samples/GSE278936/GSM8557980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557981,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2148,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557981,,,train,hesrt,samples/GSE278936/GSM8557981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557982,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3391,33538,counts,pixel,6.541529138840581,platform_constant,True,H&E,6.541529138840581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557982,,,train,hesrt,samples/GSE278936/GSM8557982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557983,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2047,33538,counts,pixel,5.3521601685394415,platform_constant,True,H&E,5.3521601685394415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557983,,,train,hesrt,samples/GSE278936/GSM8557983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557984,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,991,33538,counts,pixel,4.757521989921981,platform_constant,True,H&E,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557984,,,train,hesrt,samples/GSE278936/GSM8557984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557985,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4899,33538,counts,pixel,6.570602028671081,platform_constant,True,H&E,6.570602028671081,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557985,,,train,hesrt,samples/GSE278936/GSM8557985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557986,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2099,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557986,,,train,hesrt,samples/GSE278936/GSM8557986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8557987,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,740,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557987,,,train,hesrt,samples/GSE278936/GSM8557987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557988,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1617,33538,counts,pixel,3.982300924778753,platform_constant,True,H&E,3.982300924778753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557988,,,train,hesrt,samples/GSE278936/GSM8557988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557989,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1190,33538,counts,pixel,4.757521989921981,platform_constant,True,H&E,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557989,,,train,hesrt,samples/GSE278936/GSM8557989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8557990,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4517,33538,counts,pixel,8.325582294171769,platform_constant,True,H&E,8.325582294171769,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557990,,,train,hesrt,samples/GSE278936/GSM8557990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8557991,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1096,33538,counts,pixel,4.36106190224537,platform_constant,True,H&E,4.36106190224537,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557991,,,train,hesrt,samples/GSE278936/GSM8557991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557992,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1839,33538,counts,pixel,4.36101921098271,platform_constant,True,H&E,4.36101921098271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557992,,,train,hesrt,samples/GSE278936/GSM8557992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557993,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2254,33538,counts,pixel,5.3521601685394105,platform_constant,True,H&E,5.3521601685394105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557993,,,train,hesrt,samples/GSE278936/GSM8557993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557994,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1778,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557994,,,train,hesrt,samples/GSE278936/GSM8557994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557995,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2738,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557995,,,train,hesrt,samples/GSE278936/GSM8557995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557996,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4704,33538,counts,pixel,8.920353910938044,platform_constant,True,H&E,8.920353910938044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557996,,,train,hesrt,samples/GSE278936/GSM8557996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557997,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,goserelin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3082,33538,counts,pixel,5.946844591747711,platform_constant,True,H&E,5.946844591747711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557997,,,train,hesrt,samples/GSE278936/GSM8557997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557998,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3143,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557998,,,train,hesrt,samples/GSE278936/GSM8557998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557999,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,goserelin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4572,33538,counts,pixel,6.541529138840679,platform_constant,True,H&E,6.541529138840679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557999,,,train,hesrt,samples/GSE278936/GSM8557999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558000,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,goserelin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4419,33538,counts,pixel,5.9468445917476895,platform_constant,True,H&E,5.9468445917476895,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558000,,,train,hesrt,samples/GSE278936/GSM8558000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558001,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2845,33538,counts,pixel,5.35216016853941,platform_constant,True,H&E,5.35216016853941,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558001,,,train,hesrt,samples/GSE278936/GSM8558001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558002,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,goserelin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3906,33538,counts,pixel,6.541593175737759,platform_constant,True,H&E,6.541593175737759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558002,,,train,hesrt,samples/GSE278936/GSM8558002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558003,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4828,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558003,,,train,hesrt,samples/GSE278936/GSM8558003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558004,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,goserelin,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3621,33538,counts,pixel,7.730973347917858,platform_constant,True,H&E,7.730973347917858,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558004,,,train,hesrt,samples/GSE278936/GSM8558004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558005,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4470,33538,counts,pixel,8.325582294171769,platform_constant,True,H&E,8.325582294171769,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558005,,,train,hesrt,samples/GSE278936/GSM8558005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558006,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3602,33538,counts,pixel,7.730973347917994,platform_constant,True,H&E,7.730973347917994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558006,,,train,hesrt,samples/GSE278936/GSM8558006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558007,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4401,33538,counts,pixel,6.549034241984517,platform_constant,True,H&E,6.549034241984517,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558007,,,train,hesrt,samples/GSE278936/GSM8558007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558008,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix + apalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2296,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558008,,,train,hesrt,samples/GSE278936/GSM8558008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558009,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1802,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558009,,,train,hesrt,samples/GSE278936/GSM8558009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558010,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2216,36601,counts,pixel,4.796163069544372,platform_constant,True,H&E,4.796163069544372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558010,,,train,hesrt,samples/GSE278936/GSM8558010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558011,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix + apalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2860,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558011,,,train,hesrt,samples/GSE278936/GSM8558011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558012,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2071,36601,counts,pixel,4.796163069544372,platform_constant,True,H&E,4.796163069544372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558012,,,train,hesrt,samples/GSE278936/GSM8558012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558013,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix + apalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1525,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558013,,,train,hesrt,samples/GSE278936/GSM8558013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558014,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1465,36601,counts,pixel,4.79616306954436,platform_constant,True,H&E,4.79616306954436,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558014,,,train,hesrt,samples/GSE278936/GSM8558014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8558015,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix + apalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1650,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558015,,,train,hesrt,samples/GSE278936/GSM8558015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558016,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2093,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558016,,,train,hesrt,samples/GSE278936/GSM8558016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558017,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix + apalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1748,36601,counts,pixel,4.796163069544372,platform_constant,True,H&E,4.796163069544372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558017,,,train,hesrt,samples/GSE278936/GSM8558017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558018,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,prostate cancer,degarelix + apalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2247,36601,counts,pixel,4.796163069544385,platform_constant,True,H&E,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558018,,,train,hesrt,samples/GSE278936/GSM8558018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558019,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,castration-resistant prostate cancer,orchiectomy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,578,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558019,,,train,hesrt,samples/GSE278936/GSM8558019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558020,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,castration-resistant prostate cancer,orchiectomy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1395,33538,counts,pixel,4.75747541763628,platform_constant,True,H&E,4.75747541763628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558020,,,train,hesrt,samples/GSE278936/GSM8558020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8558021,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,castration-resistant prostate cancer,LHRH + bicalutamide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1818,33538,counts,pixel,4.757521989921981,platform_constant,True,H&E,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558021,,,train,hesrt,samples/GSE278936/GSM8558021,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558022,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,castration-resistant prostate cancer,orchiectomy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1586,33538,counts,pixel,7.136213586825774,platform_constant,True,H&E,7.136213586825774,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558022,,,train,hesrt,samples/GSE278936/GSM8558022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8558023,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,"Primary prostate cancer tumor, Patient sample",tumour tissue,MONDO:0008315,prostate cancer,disease,luna,castration-resistant prostate cancer,LHRH,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,945,33538,counts,pixel,4.75747541763628,platform_constant,True,H&E,4.75747541763628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558023,,,train,hesrt,samples/GSE278936/GSM8558023,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558024,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,"Metastatic prostate cancer tumor, Liver metastasis, Patient sample",metastasis,MONDO:0004956;MONDO:1060297,metastatic prostate carcinoma;metastatic malignant neoplasm in the liver,disease,luna,metastatic prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2190,33538,counts,pixel,4.757521989921981,platform_constant,True,H&E,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558024,,,train,hesrt,samples/GSE278936/GSM8558024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8558025,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,uberon_chain,UBERON:0002363,dura mater,"Metastatic prostate cancer tumor, Subdural metastasis, Patient sample",metastasis,MONDO:0004956,metastatic prostate carcinoma,disease,luna,metastatic prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2346,33538,counts,pixel,5.3521601685394415,platform_constant,True,H&E,5.3521601685394415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558025,,,train,hesrt,samples/GSE278936/GSM8558025,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8558026,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0016386,paraaortic lymph node,"Metastatic prostate cancer tumor, Pelvic paraaortic lymph node metastasis, Patient sample",metastasis,MONDO:0004956,metastatic prostate carcinoma,disease,luna,metastatic prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2255,33538,counts,pixel,5.153982201928492,platform_constant,True,H&E,5.153982201928492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558026,,,train,hesrt,samples/GSE278936/GSM8558026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8558027,GSE278936,GSE278936,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,"Metastatic prostate cancer tumor, Pericardial metastasis, Patient sample",metastasis,MONDO:0004956,metastatic prostate carcinoma,disease,luna,metastatic prostate cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3162,33538,counts,pixel,4.757475417636254,platform_constant,True,H&E,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558027,,,train,hesrt,samples/GSE278936/GSM8558027,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8558999,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7255,454,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8558999,,,train,sda-all,samples/GSE278969/GSM8558999,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8559000,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,80079,531,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559000,,,train,sda-all,samples/GSE278969/GSM8559000,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.9400000000000001, ""life_stage"": 0.98}",,
GSM8559001,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,36716,526,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559001,,,train,sda-all,samples/GSE278969/GSM8559001,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 0.92}",,
GSM8559002,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75207,540,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559002,,,train,sda-all,samples/GSE278969/GSM8559002,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8559003,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51694,521,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559003,,,train,sda-all,samples/GSE278969/GSM8559003,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8559004,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,3442,397,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559004,,,train,sda-all,samples/GSE278969/GSM8559004,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM8559005,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50959,527,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559005,,,train,sda-all,samples/GSE278969/GSM8559005,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.96, ""life_stage"": 0.89}",,
GSM8559006,GSE278969,GSE278969,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0007616,layer of synovial tissue,synovial tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,82341,534,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40601776,,GSM8559006,,,train,sda-all,samples/GSE278969/GSM8559006,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8563697,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,84,male,extracted field,male,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4010,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563697,,,train,hesrt,samples/GSE279181/GSM8563697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563698,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,61,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4005,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563698,,,train,hesrt,samples/GSE279181/GSM8563698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563699,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,54,male,extracted field,male,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4524,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563699,,,train,hesrt,samples/GSE279181/GSM8563699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563700,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,84,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,3006,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563700,,,train,hesrt,samples/GSE279181/GSM8563700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563701,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,81,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4489,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563701,,,train,hesrt,samples/GSE279181/GSM8563701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563702,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,68,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4384,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563702,,,train,hesrt,samples/GSE279181/GSM8563702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563703,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,42,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,3858,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563703,,,train,hesrt,samples/GSE279181/GSM8563703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563704,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,52,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,3585,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563704,,,train,hesrt,samples/GSE279181/GSM8563704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8563705,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,52,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4108,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563705,,,train,hesrt,samples/GSE279181/GSM8563705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8563706,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,53,male,extracted field,male,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,3726,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563706,,,train,hesrt,samples/GSE279181/GSM8563706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8563707,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4163,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563707,,,train,hesrt,samples/GSE279181/GSM8563707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8563708,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,3877,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563708,,,train,hesrt,samples/GSE279181/GSM8563708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8563709,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4691,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563709,,,train,hesrt,samples/GSE279181/GSM8563709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563710,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,61,male,extracted field,male,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,2826,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563710,,,train,hesrt,samples/GSE279181/GSM8563710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563711,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,60,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4509,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563711,,,train,hesrt,samples/GSE279181/GSM8563711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8563712,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,60,female,extracted field,female,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,4733,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563712,,,train,hesrt,samples/GSE279181/GSM8563712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8563713,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,50,male,extracted field,male,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,3598,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563713,,,train,hesrt,samples/GSE279181/GSM8563713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563714,GSE279181+GSE279183,GSE279181,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,MS,adult,age rule: bare number read as years,adult,50,male,extracted field,male,,,,,Visium,GEO series text (assay_final.csv),Visium,sequencing-based,high-throughput sequencing,,,,2811,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563714,,,train,hesrt,samples/GSE279181/GSM8563714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8565271,GSE279255,GSE279255,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,LCMV infection and P14 CD8 T cell transfer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,399177,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39843748,,GSM8565271,,,train,hesrt,samples/GSE279255/GSM8565271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8565626,GSE279273,GSE279273,Spatially Resolved Transcriptomic Signatures of Hippocampal Subregions and Arc-Expressing Ensembles in Active Place Avoidance Memory [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Coronal Mouse Brain with Bilateral Dorsal Hippocampus,primary tissue,,,perturbation,luna,,trained,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4152,32285,counts,pixel,4.006060881677566,platform_constant,True,H&E,4.006060881677566,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38260257,,GSM8565626,,,train,hesrt,samples/GSE279273/GSM8565626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8565627,GSE279273,GSE279273,Spatially Resolved Transcriptomic Signatures of Hippocampal Subregions and Arc-Expressing Ensembles in Active Place Avoidance Memory [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Coronal Mouse Brain with Bilateral Dorsal Hippocampus,primary tissue,,,perturbation,luna,,untrained,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3738,32285,counts,pixel,4.003989241547924,platform_constant,True,H&E,4.003989241547924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38260257,,GSM8565627,,,train,hesrt,samples/GSE279273/GSM8565627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8569295,GSE279405,GSE279405,Spatial transcriptomical analysis of livers from patients with COVID19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,Deceased,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4981,37082,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39709771,,GSM8569295,,,train,hesrt,samples/GSE279405/GSM8569295,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM8569296,GSE279405,GSE279405,Spatial transcriptomical analysis of livers from patients with COVID19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,Moderate,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,271,37082,counts,pixel,7.142856785714281,platform_constant,True,H&E,7.142856785714281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39709771,,GSM8569296,,,train,hesrt,samples/GSE279405/GSM8569296,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8569297,GSE279405,GSE279405,Spatial transcriptomical analysis of livers from patients with COVID19,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19,Severe,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,751,37082,counts,pixel,8.557851627466466,platform_constant,True,H&E,8.557851627466466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39709771,,GSM8569297,,,train,hesrt,samples/GSE279405/GSM8569297,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8573641,GSE279507,GSE279507,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:1060215,preneoplastic lesion,disease,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),adult,age rule: age with unit,adult,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2971,19465,counts,pixel,4.450783024189433,platform_constant,True,H&E,4.450783024189433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573641,,,train,hesrt,samples/GSE279507/GSM8573641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8573642,GSE279507,GSE279507,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:1060215,preneoplastic lesion,disease,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),adult,age rule: age with unit,adult,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2673,19465,counts,pixel,4.7330988406972185,platform_constant,True,H&E,4.7330988406972185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573642,,,train,hesrt,samples/GSE279507/GSM8573642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8573643,GSE279507,GSE279507,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:1060215,preneoplastic lesion,disease,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),adult,age rule: age with unit,adult,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3306,19465,counts,pixel,4.435757470268657,platform_constant,True,H&E,4.435757470268657,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573643,,,train,hesrt,samples/GSE279507/GSM8573643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8573644,GSE279507,GSE279507,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:1060215,preneoplastic lesion,disease,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),adult,age rule: age with unit,adult,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2444,19465,counts,pixel,3.970377427362742,platform_constant,True,H&E,3.970377427362742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573644,,,train,hesrt,samples/GSE279507/GSM8573644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8573645,GSE279507,GSE279507,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:1060215,preneoplastic lesion,disease,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),adult,age rule: age with unit,adult,6 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3275,19465,counts,pixel,4.83235557081763,platform_constant,True,H&E,4.83235557081763,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573645,,,train,hesrt,samples/GSE279507/GSM8573645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8576301,GSE279576,GSE279576,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone Marrow,tumour tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,Newly diagnosed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2766,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576301,,,train,hesrt,samples/GSE279576/GSM8576301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8576302,GSE279576,GSE279576,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,Newly diagnosed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3397,18085,counts,pixel,7.142856785714281,platform_constant,True,H&E,7.142856785714281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576302,,,train,hesrt,samples/GSE279576/GSM8576302,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 0.43, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8576303,GSE279576,GSE279576,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone Marrow,tumour tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,Newly diagnosed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1544,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576303,,,train,hesrt,samples/GSE279576/GSM8576303,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8576304,GSE279576,GSE279576,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002524,mediastinal lymph node,Mediastinal Lymph Node,primary tissue,MONDO:0004928;MONDO:0018874,lymph node disorder;acute myeloid leukemia,disease,luna,AML,Newly diagnosed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4437,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576304,,,train,hesrt,samples/GSE279576/GSM8576304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8576305,GSE279576,GSE279576,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,Newly diagnosed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1442,17943,counts,pixel,4.090499854991791,platform_constant,True,H&E,4.090499854991791,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576305,,,train,hesrt,samples/GSE279576/GSM8576305,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8576306,GSE279576,GSE279576,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002524,mediastinal lymph node,Mediastinal Lymph Node,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,AML,Newly diagnosed,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3431,17943,counts,pixel,4.280999865191321,platform_constant,True,H&E,4.280999865191321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576306,,,train,hesrt,samples/GSE279576/GSM8576306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8577744,GSE279676,GSE279676,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,g-Control,adult,age rule: age with unit,adult,12–16 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2320,21866,counts,pixel,4.504487253655969,platform_constant,True,H&E,4.504487253655969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577744,,,test,hesrt,samples/GSE279676/GSM8577744,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8577745,GSE279676,GSE279676,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,g-Trps1,adult,age rule: age with unit,adult,12–16 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2386,21866,counts,pixel,4.504487253655969,platform_constant,True,H&E,4.504487253655969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577745,,,test,hesrt,samples/GSE279676/GSM8577745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8577746,GSE279676,GSE279676,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,g-Sox9,adult,age rule: age with unit,adult,12–16 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2857,21866,counts,pixel,4.504487253655969,platform_constant,True,H&E,4.504487253655969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577746,,,test,hesrt,samples/GSE279676/GSM8577746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8577747,GSE279676,GSE279676,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,g-Sox9+Trps1,adult,age rule: age with unit,adult,12–16 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2184,21866,counts,pixel,4.277131456111153,platform_constant,True,H&E,4.277131456111153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577747,,,test,hesrt,samples/GSE279676/GSM8577747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8586920,GSE280088,GSE280088,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Dorsal skin,primary tissue,,,normal,luna,,Vehicle & Doxycycline,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,91345,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586920,,,train,sda-all,samples/GSE280088/GSM8586920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.76, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8586921,GSE280088,GSE280088,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Dorsal skin,primary tissue,,,normal,luna,,Vehicle & Doxycycline,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,182402,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586921,,,train,sda-all,samples/GSE280088/GSM8586921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8586922,GSE280088,GSE280088,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0006956,buccal mucosa,Buccal mucosa,primary tissue,,,normal,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67803,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586922,,,train,sda-all,samples/GSE280088/GSM8586922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8586923,GSE280088,GSE280088,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,POD4 wounded dorsal skin,primary tissue,,,disease,luna,,Vehicle & Doxycycline,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,174241,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586923,,,train,sda-all,samples/GSE280088/GSM8586923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.8, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8591185,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,295169,550,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591185,,,test,sda-all,samples/GSE280177/GSM8591185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8591186,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,357181,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591186,,,test,sda-all,samples/GSE280177/GSM8591186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8591187,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,365726,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591187,,,test,sda-all,samples/GSE280177/GSM8591187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8591188,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,MONDO:0008608;MONDO:0002254,Down syndrome;syndromic disease,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,340478,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591188,,,test,sda-all,samples/GSE280177/GSM8591188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591189,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,MONDO:0008608;MONDO:0002254,Down syndrome;syndromic disease,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,407471,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591189,,,test,sda-all,samples/GSE280177/GSM8591189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8591190,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,MONDO:0008608;MONDO:0002254,Down syndrome;syndromic disease,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,599237,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591190,,,test,sda-all,samples/GSE280177/GSM8591190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8591191,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,395806,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591191,,,test,sda-all,samples/GSE280177/GSM8591191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8591192,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1108910,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591192,,,test,sda-all,samples/GSE280177/GSM8591192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591193,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1010190,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591193,,,test,sda-all,samples/GSE280177/GSM8591193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591194,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,MONDO:0008608;MONDO:0002254,Down syndrome;syndromic disease,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1002879,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591194,,,test,sda-all,samples/GSE280177/GSM8591194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591195,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,MONDO:0008608;MONDO:0002254,Down syndrome;syndromic disease,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,678514,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591195,,,test,sda-all,samples/GSE280177/GSM8591195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8591196,GSE280177,GSE280177,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain section,primary tissue,MONDO:0008608;MONDO:0002254,Down syndrome;syndromic disease,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,298648,550,counts,um,1.0,verified,False,,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591196,,,test,sda-all,samples/GSE280177/GSM8591196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8594561,GSE280313,GSE280313,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumV2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colorectal cancer,Colon Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4269,18085,counts,pixel,34.78942992901159,platform_constant,True,H&E,34.78942992901159,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594561,,,train,hesrt,samples/GSE280313/GSM8594561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8594562,GSE280313,GSE280313,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumV2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal Adjacent,primary tissue,,,normal,luna,,Colon Normal Adjacent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3887,18085,counts,pixel,42.80179315434508,platform_constant,True,H&E,42.80179315434508,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594562,,,train,hesrt,samples/GSE280313/GSM8594562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8594563,GSE280313,GSE280313,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumV2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal Adjacent,primary tissue,,,normal,luna,,Colon Normal Adjacent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2638,18085,counts,pixel,43.31533278627761,platform_constant,True,H&E,43.31533278627761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594563,,,train,hesrt,samples/GSE280313/GSM8594563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM8594564,GSE280314,GSE280314,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colon cancer,colon cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,307762,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594564,,,test,hesrt,samples/GSE280314/GSM8594564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594565,GSE280314,GSE280314,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colon cancer,colon cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,340837,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594565,,,test,hesrt,samples/GSE280314/GSM8594565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594566,GSE280314,GSE280314,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,colon,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colon cancer,colon cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,275998,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594566,,,test,hesrt,samples/GSE280314/GSM8594566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594567,GSE280315,GSE280315,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colorectal cancer,Colon Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,507684,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594567,,,test,hesrt,samples/GSE280315/GSM8594567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594568,GSE280315,GSE280315,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colorectal cancer,Colon Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,545913,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594568,,,test,hesrt,samples/GSE280315/GSM8594568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594569,GSE280315,GSE280315,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,colorectal cancer,Colon Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,541968,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594569,,,test,hesrt,samples/GSE280315/GSM8594569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594570,GSE280315,GSE280315,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal Adjacent,primary tissue,,,normal,luna,colorectal cancer,Colon Normal Adjacent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,487552,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594570,,,test,hesrt,samples/GSE280315/GSM8594570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8594571,GSE280315,GSE280315,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal Adjacent,primary tissue,,,normal,luna,colorectal cancer,Colon Normal Adjacent,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,435773,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594571,,,test,hesrt,samples/GSE280315/GSM8594571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,normal_but_disease_text
GSM8594572,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,33 years,male,extracted field,male,GSE280316:v1225A_M,v1225A_M,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4062,36601,counts,pixel,4.7501803807134255,platform_constant,True,H&E,4.7501803807134255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594572,,,test,hesrt,samples/GSE280316/GSM8594572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594573,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,32 years,male,extracted field,male,GSE280316:v1735A_M,v1735A_M,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4247,36601,counts,pixel,5.074515298069279,platform_constant,True,H&E,5.074515298069279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594573,,,test,hesrt,samples/GSE280316/GSM8594573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594574,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,39 years,male,extracted field,male,GSE280316:v5459A_M,v5459A_M,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3955,36601,counts,pixel,4.666395554703863,platform_constant,True,H&E,4.666395554703863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594574,,,test,hesrt,samples/GSE280316/GSM8594574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594575,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,48 years,female,extracted field,female,GSE280316:v5993A_F,v5993A_F,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4872,36601,counts,pixel,5.07451529806925,platform_constant,True,H&E,5.07451529806925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594575,,,test,hesrt,samples/GSE280316/GSM8594575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594576,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,29 years,male,extracted field,male,GSE280316:v6197A_M,v6197A_M,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4553,36601,counts,pixel,4.664590578628688,platform_constant,True,H&E,4.664590578628688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594576,,,test,hesrt,samples/GSE280316/GSM8594576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594577,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,27 years,female,extracted field,female,GSE280316:v6588A_F,v6588A_F,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4986,36601,counts,pixel,4.262023511115683,platform_constant,True,H&E,4.262023511115683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594577,,,test,hesrt,samples/GSE280316/GSM8594577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594578,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,27 years,female,extracted field,female,GSE280316:v6588B_F,v6588B_F,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4968,36601,counts,pixel,4.238797747488989,platform_constant,True,H&E,4.238797747488989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594578,,,test,hesrt,samples/GSE280316/GSM8594578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594579,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,37 years,female,extracted field,female,GSE280316:v8667A_F,v8667A_F,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4635,36601,counts,pixel,4.666425962895985,platform_constant,True,H&E,4.666425962895985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594579,,,test,hesrt,samples/GSE280316/GSM8594579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594580,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,28 years,female,extracted field,female,GSE280316:v8741A_F,v8741A_F,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4599,36601,counts,pixel,4.240163708616329,platform_constant,True,H&E,4.240163708616329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594580,,,test,hesrt,samples/GSE280316/GSM8594580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594581,GSE280316,GSE280316,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,brain (hypothalamus),primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,28 years,female,extracted field,female,GSE280316:v8741B_F,v8741B_F,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4772,36601,counts,pixel,4.263461311410904,platform_constant,True,H&E,4.263461311410904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594581,,,test,hesrt,samples/GSE280316/GSM8594581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8595803,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,perturbation,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14191,540,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM8595803,,,train,sda-all,samples/GSE280376/GSM8595803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8595804,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,perturbation,luna,,Cryoablation,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27737,540,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM8595804,,,train,sda-all,samples/GSE280376/GSM8595804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8595805,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,perturbation,luna,,Cryoablation,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35946,540,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM8595805,,,train,sda-all,samples/GSE280376/GSM8595805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460459,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,40754,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000154469312097,VERIFIED,PARTIAL,FAILED,,,VERIFIED,PASS,,,41184578,,GSM9460459,,,train,sda-all,samples/GSE280376/GSM9460459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460460,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,perturbation,luna,,Cryoablation,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47536,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999814936667215,VERIFIED,PARTIAL,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,zero_count_observations,VERIFIED,PASS,,,41184578,,GSM9460460,,,train,sda-all,samples/GSE280376/GSM9460460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460461,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,perturbation,luna,,Cryoablation,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38903,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965668772315,VERIFIED,PARTIAL,FAILED,,zero_count_observations,VERIFIED,PASS,,,41184578,,GSM9460461,,,train,sda-all,samples/GSE280376/GSM9460461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460462,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,disease,luna,,Cryoablation,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46213,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000235682300259,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM9460462,,,train,sda-all,samples/GSE280376/GSM9460462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460463,GSE280376,GSE280376,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0002084,heart left ventricle,heart left ventricles,primary tissue,,,perturbation,luna,,Cryoablation,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61437,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998085532516495,VERIFIED,PARTIAL,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41184578,,GSM9460463,,,train,sda-all,samples/GSE280376/GSM9460463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8598169,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,38.99,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,69884,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000098052032945,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598169,,,train,sda-all,samples/GSE280460/GSM8598169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598170,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,38.99,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,70592,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999923717361929,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598170,,,train,sda-all,samples/GSE280460/GSM8598170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8598171,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,37.33333,female,extracted field,Female,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,74669,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000010904174117,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598171,,,train,sda-all,samples/GSE280460/GSM8598171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598172,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,28.55578,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,74032,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034522439586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598172,,,train,sda-all,samples/GSE280460/GSM8598172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598173,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,48.15868,female,extracted field,Female,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60608,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999908745802306,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598173,,,train,sda-all,samples/GSE280460/GSM8598173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598174,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,48.15868,female,extracted field,Female,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52688,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500002434156078,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598174,,,train,sda-all,samples/GSE280460/GSM8598174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598175,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,31.54,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,65930,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017254071961,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598175,,,train,sda-all,samples/GSE280460/GSM8598175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8598176,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,31.54,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52813,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500005995465248,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598176,,,train,sda-all,samples/GSE280460/GSM8598176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8598177,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,27.34839,female,extracted field,Female,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,102252,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000081677992682,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598177,,,train,sda-all,samples/GSE280460/GSM8598177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598178,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,32.67,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,97498,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961880282304,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598178,,,train,sda-all,samples/GSE280460/GSM8598178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598179,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,32.67,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,72990,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999891096009763,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598179,,,train,sda-all,samples/GSE280460/GSM8598179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598180,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,28.19439,female,extracted field,Female,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,62834,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999845450049456,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598180,,,train,sda-all,samples/GSE280460/GSM8598180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598181,GSE280460,GSE280460,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,28.19439,female,extracted field,Female,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55902,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965668772315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598181,,,train,sda-all,samples/GSE280460/GSM8598181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8599602,GSE280515,GSE280515,Spatially-restricted and ontogenically-distinct hepatic macrophages are required for tissue repair.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1790,32285,counts,pixel,4.501372546294116,platform_constant,True,H&E,4.501372546294116,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39862865,,GSM8599602,,,train,hesrt,samples/GSE280515/GSM8599602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8599603,GSE280515,GSE280515,Spatially-restricted and ontogenically-distinct hepatic macrophages are required for tissue repair.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,APAP,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1272,32285,counts,pixel,4.498849675572209,platform_constant,True,H&E,4.498849675572209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39862865,,GSM8599603,,,train,hesrt,samples/GSE280515/GSM8599603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8599604,GSE280515,GSE280515,Spatially-restricted and ontogenically-distinct hepatic macrophages are required for tissue repair.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,APAP,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2178,32285,counts,pixel,4.826722777878871,platform_constant,True,H&E,4.826722777878871,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39862865,,GSM8599604,,,train,hesrt,samples/GSE280515/GSM8599604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600886,GSE280570,GSE280570,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,temporal cortex,primary tissue,,,normal,luna,,,juvenile,age rule: age in years,juvenile,15 years,unknown,not stated,,GSE280570:P013,P013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3651,14197,counts,pixel,1.2538260890797304,platform_constant,True,H&E,1.2538260890797304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600886,,,train,hesrt,samples/GSE280570/GSM8600886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600887,GSE280570,GSE280570,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,temporal cortex,primary tissue,,,normal,luna,,,juvenile,age rule: age in years,juvenile,15 years,unknown,not stated,,GSE280570:P013,P013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3723,14197,counts,pixel,1.2538260890797304,platform_constant,True,H&E,1.2538260890797304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600887,,,train,hesrt,samples/GSE280570/GSM8600887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600888,GSE280570,GSE280570,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,temporal cortex,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,31 years,unknown,not stated,,GSE280570:P015,P015,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3574,14197,counts,pixel,1.3065478400923494,platform_constant,True,H&E,1.3065478400923494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600888,,,train,hesrt,samples/GSE280570/GSM8600888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600889,GSE280570,GSE280570,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,temporal cortex,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,31 years,unknown,not stated,,GSE280570:P015,P015,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3376,14197,counts,pixel,1.25,platform_constant,True,H&E,1.25,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600889,,,train,hesrt,samples/GSE280570/GSM8600889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602654,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,230258,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602654,,,val,sda-all,samples/GSE280634/GSM8602654,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602655,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,118415,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602655,,,val,sda-all,samples/GSE280634/GSM8602655,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602656,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,80536,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602656,,,val,sda-all,samples/GSE280634/GSM8602656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602657,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19458,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602657,,,val,sda-all,samples/GSE280634/GSM8602657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602658,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66047,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602658,,,val,sda-all,samples/GSE280634/GSM8602658,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602659,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26735,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602659,,,val,sda-all,samples/GSE280634/GSM8602659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602660,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,118355,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602660,,,val,sda-all,samples/GSE280634/GSM8602660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602661,GSE280634,GSE280634,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,Primary pancreatic ductal adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34820,280,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39535921,,GSM8602661,,,val,sda-all,samples/GSE280634/GSM8602661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8604632,GSE280709,GSE280709,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist Spatial Gene Expression for FFPE v2,,,spot,3055,19465,counts,pixel,4.095795299240598,platform_constant,True,H&E,4.095795299240598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40155412,10.1038/s41380-025-02970-w,GSM8604632,,,train,hesrt,samples/GSE280709/GSM8604632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8604633,GSE280709,GSE280709,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Celsr3 heterozygous,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist Spatial Gene Expression for FFPE v2,,,spot,3445,19465,counts,pixel,3.863979079978399,platform_constant,True,H&E,3.863979079978399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40155412,10.1038/s41380-025-02970-w,GSM8604633,,,train,hesrt,samples/GSE280709/GSM8604633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8604634,GSE280709,GSE280709,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain control.1,primary tissue,,,normal,luna,,wild type biol rep 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2793,19465,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,FAIL,,,40155412,,GSM8604634,,,train,sda-all,samples/GSE280709/GSM8604634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8604635,GSE280709,GSE280709,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Celsr3 heterozygous,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium CytAssist Spatial Gene Expression for FFPE v2,,,spot,3168,19465,counts,pixel,5.495541433136186,platform_constant,True,H&E,5.495541433136186,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40155412,10.1038/s41380-025-02970-w,GSM8604635,,,train,hesrt,samples/GSE280709/GSM8604635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8605231,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,perturbation,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2897,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.273413839074053,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605231,,,train,sda-all,samples/GSE280737/GSM8605231,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.91}",sample_kind,low_confidence_annotation
GSM8605232,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2976,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.564069398170051,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605232,,,train,sda-all,samples/GSE280737/GSM8605232,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605233,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2164,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.116672931172808,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605233,,,train,sda-all,samples/GSE280737/GSM8605233,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605236,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2298,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.121971920040989,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605236,,,train,sda-all,samples/GSE280737/GSM8605236,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.52, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.73}",sample_kind,low_confidence_annotation
GSM8605237,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2801,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.097377352597521,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605237,,,train,sda-all,samples/GSE280737/GSM8605237,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605238,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2532,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.025586115133708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605238,,,train,sda-all,samples/GSE280737/GSM8605238,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605239,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3004,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.348647482958716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605239,,,train,sda-all,samples/GSE280737/GSM8605239,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605243,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3707,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.096391747539663,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605243,,,train,sda-all,samples/GSE280737/GSM8605243,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM8605244,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,perturbation,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2768,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.109435383957746,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605244,,,train,sda-all,samples/GSE280737/GSM8605244,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.67}",sample_kind,low_confidence_annotation
GSM8605245,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2637,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.15819398371339,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605245,,,train,sda-all,samples/GSE280737/GSM8605245,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8605246,GSE280737,GSE280737,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,esophagus,luna,UBERON:0001043,esophagus,Esophagus,engineered tissue,,,perturbation,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),adult,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3471,22040,counts,um,1.0,verified,True,H&E-like (heuristic),4.220607398327829,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605246,,,train,sda-all,samples/GSE280737/GSM8605246,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.56}",sample_kind;life_stage,low_confidence_annotation
GSM8605279,GSE280741,GSE280741,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0005105;MONDO:0024880,melanoma;metastatic malignant neoplasm,disease,luna,,humanized,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,163281,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092661230541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39831781,,GSM8605279,,,train,sda-all,samples/GSE280741/GSM8605279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.38, ""disease_status"": 0.28, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,feature_species_differs;low_confidence_annotation
GSM8605280,GSE280741,GSE280741,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,non-humanized,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,121496,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000086278299282,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,39831781,,GSM8605280,,,train,sda-all,samples/GSE280741/GSM8605280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM8605281,GSE280741,GSE280741,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0005105,metastatic malignant neoplasm in the liver;melanoma,disease,luna,,humanized,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,154482,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999919417967491,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39831781,,GSM8605281,,,train,sda-all,samples/GSE280741/GSM8605281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM8605282,GSE280741,GSE280741,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,non-humanized,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,189840,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999021909233177,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,39831781,,GSM8605282,,,train,sda-all,samples/GSE280741/GSM8605282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM8605283,GSE280741,GSE280741,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,not stated,luna,,humanized,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,315017,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000074870991522,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39831781,,GSM8605283,,,train,sda-all,samples/GSE280741/GSM8605283,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.8, ""disease_status"": 0.24, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM8605284,GSE280741,GSE280741,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,,non-humanized,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117935,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000085320072156,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,39831781,,GSM8605284,,,train,sda-all,samples/GSE280741/GSM8605284,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.97, ""disease_status"": 0.67, ""uberon"": 0.98, ""life_stage"": 1.0}",,feature_species_differs
GSM8607200,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,451265,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607200,,,test,sda-all,samples/GSE280895/GSM8607200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607201,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,362273,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607201,,,test,sda-all,samples/GSE280895/GSM8607201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607202,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,374351,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607202,,,test,sda-all,samples/GSE280895/GSM8607202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607203,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,254026,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607203,,,test,sda-all,samples/GSE280895/GSM8607203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607204,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,335166,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607204,,,test,sda-all,samples/GSE280895/GSM8607204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8607205,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,380194,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607205,,,test,sda-all,samples/GSE280895/GSM8607205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607206,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,385008,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607206,,,test,sda-all,samples/GSE280895/GSM8607206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM8607207,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,330972,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607207,,,test,sda-all,samples/GSE280895/GSM8607207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM8607208,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,,,normal,luna,,uninfected,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,266297,537,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607208,,,test,sda-all,samples/GSE280895/GSM8607208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607209,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,,,normal,luna,,uninfected,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,218147,540,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607209,,,test,sda-all,samples/GSE280895/GSM8607209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607210,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,469009,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,39843748,,GSM8607210,,,test,sda-all,samples/GSE280895/GSM8607210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607211,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,295866,499,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607211,,,test,sda-all,samples/GSE280895/GSM8607211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607212,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infection with LCMV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,225052,465,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607212,,,test,sda-all,samples/GSE280895/GSM8607212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607213,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE280895:donor1,donor1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,91339,533,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607213,,,test,sda-all,samples/GSE280895/GSM8607213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607214,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE280895:donor1,donor1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,94150,533,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607214,,,test,sda-all,samples/GSE280895/GSM8607214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607215,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE280895:donor2,donor2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63567,540,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607215,,,test,sda-all,samples/GSE280895/GSM8607215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8607216,GSE280895,GSE280895,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE280895:donor2,donor2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66037,538,counts,um,1.0,verified,False,,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607216,,,test,sda-all,samples/GSE280895/GSM8607216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8608325,GSE280982,GSE280982,Single-cell sequencing across radiation treatment timepoints in head and neck cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral cancer,tumour tissue,MONDO:0023644;MONDO:0021310,lip and oral cavity carcinoma;malignant tumor of neck,disease,luna,,Pre-Treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2399,18085,counts,um,1.0,verified,True,H&E,7.01902241936398,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40593620,,GSM8608325,,,train,sda-all,samples/GSE280982/GSM8608325,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8608332,GSE280982,GSE280982,Single-cell sequencing across radiation treatment timepoints in head and neck cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral cancer,tumour tissue,MONDO:0023644;MONDO:0021310,lip and oral cavity carcinoma;malignant tumor of neck,disease,luna,,6 Weeks Post-Radiation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1436,18085,counts,um,1.0,verified,True,H&E,6.98160469154036,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40593620,,GSM8608332,,,train,sda-all,samples/GSE280982/GSM8608332,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8608415,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001891,midbrain,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3658,18085,counts,pixel,6.165909184106821,platform_constant,True,H&E,6.165909184106821,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608415,,,train,hesrt,samples/GSE280990/GSM8608415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8608416,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4919,18085,counts,pixel,6.490492154509978,platform_constant,True,H&E,6.490492154509978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608416,,,train,hesrt,samples/GSE280990/GSM8608416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608417,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4235,18085,counts,pixel,4.6327167383938646,platform_constant,True,H&E,4.6327167383938646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608417,,,train,hesrt,samples/GSE280990/GSM8608417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608418,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,5.130743545277269,platform_constant,True,H&E,5.130743545277269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608418,,,train,hesrt,samples/GSE280990/GSM8608418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608419,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3127,18085,counts,pixel,6.59926078646137,platform_constant,True,H&E,6.59926078646137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608419,,,train,hesrt,samples/GSE280990/GSM8608419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608420,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000958,medulla of organ,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1958,17943,counts,pixel,3.9249862496150274,platform_constant,True,H&E,3.9249862496150274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608420,,,train,hesrt,samples/GSE280990/GSM8608420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8608421,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000958,medulla of organ,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2712,17943,counts,pixel,3.9117023094559134,platform_constant,True,H&E,3.9117023094559134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608421,,,train,hesrt,samples/GSE280990/GSM8608421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8608422,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002298,brainstem,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3171,18085,counts,pixel,5.130597207322755,platform_constant,True,H&E,5.130597207322755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608422,,,train,hesrt,samples/GSE280990/GSM8608422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8608423,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3423,18085,counts,pixel,5.538935407241965,platform_constant,True,H&E,5.538935407241965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608423,,,train,hesrt,samples/GSE280990/GSM8608423,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8608424,GSE280990,GSE280990,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002240,spinal cord,DIPG tumor-infiltrated brainstem,tumour tissue,MONDO:0006033,diffuse intrinsic pontine glioma,disease,luna,diffuse intrinsic pontine glioma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2744,18085,counts,pixel,5.16136529592397,platform_constant,True,H&E,5.16136529592397,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608424,,,train,hesrt,samples/GSE280990/GSM8608424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8610676,GSE281086,GSE281086,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1650,32286,counts,pixel,4.198575707421534,platform_constant,True,H&E,4.198575707421534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610676,,,train,hesrt,samples/GSE281086/GSM8610676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8610677,GSE281086,GSE281086,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1752,32286,counts,pixel,4.3252682691778395,platform_constant,True,H&E,4.3252682691778395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610677,,,train,hesrt,samples/GSE281086/GSM8610677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM8610678,GSE281086,GSE281086,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1556,32286,counts,pixel,4.327040201438236,platform_constant,True,H&E,4.327040201438236,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610678,,,train,hesrt,samples/GSE281086/GSM8610678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8610679,GSE281086,GSE281086,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1462,32286,counts,pixel,4.3208384592939,platform_constant,True,H&E,4.3208384592939,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610679,,,train,hesrt,samples/GSE281086/GSM8610679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8616489,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,88480,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000267225785232,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616489,,,val,sda-all,samples/GSE281265/GSM8616489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8616490,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,99258,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999814936667215,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616490,,,val,sda-all,samples/GSE281265/GSM8616490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8616491,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 and 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17668,517,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000613246116108,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616491,,,val,sda-all,samples/GSE281265/GSM8616491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8616492,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 and 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,87008,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999589827727645,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616492,,,val,sda-all,samples/GSE281265/GSM8616492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8616493,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,149446,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999691611842106,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616493,,,val,sda-all,samples/GSE281265/GSM8616493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8616494,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48324,539,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000613246116108,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616494,,,val,sda-all,samples/GSE281265/GSM8616494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8616495,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,89614,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041118421052,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616495,,,val,sda-all,samples/GSE281265/GSM8616495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8616496,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,99372,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041118421052,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616496,,,val,sda-all,samples/GSE281265/GSM8616496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM8616497,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 and 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8954,504,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616497,,,val,sda-all,samples/GSE281265/GSM8616497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8616498,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 and 42 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,91045,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49995917256396294,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616498,,,val,sda-all,samples/GSE281265/GSM8616498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8616499,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,149417,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999671214861088,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616499,,,val,sda-all,samples/GSE281265/GSM8616499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8616500,GSE281265,GSE281265,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,perturbation,luna,,Immunized 21 days prior to harvest,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52971,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000408719346049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616500,,,val,sda-all,samples/GSE281265/GSM8616500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8651954,GSE281288,GSE281288,NFE2-driven neutrophil polarization promotes pancreatic cancer liver metastasis progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0009831;MONDO:0024880,malignant pancreatic neoplasm;metastatic malignant neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3717,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8307021331391615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39827463,,GSM8651954,,,train,sda-all,samples/GSE281288/GSM8651954,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8651955,GSE281288,GSE281288,NFE2-driven neutrophil polarization promotes pancreatic cancer liver metastasis progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,metastasis,MONDO:1060297;MONDO:0009831,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2806,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.4374095161792346,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39827463,,GSM8651955,,,train,sda-all,samples/GSE281288/GSM8651955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8618646,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1327,32738,counts,um,1.0,verified,True,H&E,4.576557648643502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618646,,,test,sda-all,samples/GSE281317/GSM8618646,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8618647,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,907,32738,counts,um,1.0,verified,True,H&E-like (heuristic),4.661522166134551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618647,,,test,sda-all,samples/GSE281317/GSM8618647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8618648,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1401,32738,counts,um,1.0,verified,True,H&E-like (heuristic),4.672414014584598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618648,,,test,sda-all,samples/GSE281317/GSM8618648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM8618649,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1156,32738,counts,um,1.0,verified,True,H&E,4.672291099408858,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618649,,,test,sda-all,samples/GSE281317/GSM8618649,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8618650,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1386,32738,counts,um,1.0,verified,True,H&E,4.684630455381584,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618650,,,test,sda-all,samples/GSE281317/GSM8618650,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8618651,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1684,36601,counts,um,1.0,verified,True,H&E,6.846725050419788,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618651,,,test,sda-all,samples/GSE281317/GSM8618651,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618652,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,907,36601,counts,um,1.0,verified,True,H&E,6.782591530401471,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618652,,,test,sda-all,samples/GSE281317/GSM8618652,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618653,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,152,36601,counts,um,1.0,verified,True,undetermined,13.117375656409834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618653,,,test,sda-all,samples/GSE281317/GSM8618653,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8618654,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1133,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.8766933386479763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618654,,,test,sda-all,samples/GSE281317/GSM8618654,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8618655,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,771,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.7658785039160425,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618655,,,test,sda-all,samples/GSE281317/GSM8618655,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618656,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,436,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.806928994368646,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618656,,,test,sda-all,samples/GSE281317/GSM8618656,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8618657,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,150,36601,counts,um,1.0,verified,True,H&E,4.090698532680941,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618657,,,test,sda-all,samples/GSE281317/GSM8618657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8618658,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,182,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.107477993770303,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618658,,,test,sda-all,samples/GSE281317/GSM8618658,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM8618659,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,159,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.8794609642085582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618659,,,test,sda-all,samples/GSE281317/GSM8618659,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8618660,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,478,36601,counts,um,1.0,verified,True,H&E,6.993391312272474,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618660,,,test,sda-all,samples/GSE281317/GSM8618660,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618661,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,228,36601,counts,um,1.0,verified,True,H&E,6.997303962923091,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618661,,,test,sda-all,samples/GSE281317/GSM8618661,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618662,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,329,36601,counts,um,1.0,verified,True,H&E,6.066758427567837,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618662,,,test,sda-all,samples/GSE281317/GSM8618662,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618663,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,784,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.102525482246861,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618663,,,test,sda-all,samples/GSE281317/GSM8618663,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8618664,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,856,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.098079838188341,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618664,,,test,sda-all,samples/GSE281317/GSM8618664,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8618665,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1784,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.111596157787699,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618665,,,test,sda-all,samples/GSE281317/GSM8618665,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618666,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1032,36601,counts,um,1.0,verified,True,H&E,4.105941103663099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618666,,,test,sda-all,samples/GSE281317/GSM8618666,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 0.73}",,
GSM8618667,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,2310,36601,counts,um,1.0,verified,True,H&E,6.8130875314314086,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618667,,,test,sda-all,samples/GSE281317/GSM8618667,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8618668,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,2264,36601,counts,um,1.0,verified,True,H&E,6.828955416599126,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618668,,,test,sda-all,samples/GSE281317/GSM8618668,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8618669,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,2308,36601,counts,um,1.0,verified,True,H&E,7.599074639506731,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618669,,,test,sda-all,samples/GSE281317/GSM8618669,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8618670,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,894,36601,counts,um,1.0,verified,True,H&E,7.60984452450296,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618670,,,test,sda-all,samples/GSE281317/GSM8618670,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8618671,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1367,36601,counts,um,1.0,verified,True,H&E,7.613629354900966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618671,,,test,sda-all,samples/GSE281317/GSM8618671,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8618672,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,773,36601,counts,um,1.0,verified,True,H&E,7.613428253295643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618672,,,test,sda-all,samples/GSE281317/GSM8618672,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM8618673,GSE281317,GSE281317,single-cell multiomics data for the developing human pelvic girdle [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001273,ilium,ilium,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1007,36601,counts,um,1.0,verified,True,H&E,7.624020563894754,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618673,,,test,sda-all,samples/GSE281317/GSM8618673,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM8621905,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Brain metastatic Breast cancer,metastasis,MONDO:0007254,breast cancer,disease,luna,,,adult,age rule: age in years,adult,37 years,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,156351,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41923644,,GSM8621905,,,train,sda-all,samples/GSE281488/GSM8621905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9285239,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,120339,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285239,,,train,sda-all,samples/GSE281488/GSM9285239,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9285240,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,98707,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285240,,,train,sda-all,samples/GSE281488/GSM9285240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285241,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,118738,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285241,,,train,sda-all,samples/GSE281488/GSM9285241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285242,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,16430,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285242,,,train,sda-all,samples/GSE281488/GSM9285242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285243,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,365857,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285243,,,train,sda-all,samples/GSE281488/GSM9285243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285244,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,118994,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285244,,,train,sda-all,samples/GSE281488/GSM9285244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285245,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,177895,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285245,,,train,sda-all,samples/GSE281488/GSM9285245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9285246,GSE281488+GSE281492,GSE281488,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,Primary Breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,86518,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41923644,,GSM9285246,,,train,sda-all,samples/GSE281488/GSM9285246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8621906,GSE281489+GSE281492,GSE281489,In situ single-cell profiling of lung metastases from the MMTV-PyMT mouse model of metastatic breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,metastasis,MONDO:0007254,breast cancer,disease,luna,,,adult,age rule: age with unit,adult,5.5 months,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,38384,1011,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41923644,,GSM8621906,,,train,sda-all,samples/GSE281489/GSM8621906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8627601,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,normal adjacent liver tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:A009,A009,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1714,36601,counts,pixel,4.015060633494453,platform_constant,True,H&E,4.015060633494453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627601,,,val,hesrt,samples/GSE281759/GSM8627601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8627602,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:A009,A009,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1762,36601,counts,pixel,3.8760854559127633,platform_constant,True,H&E,3.8760854559127633,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627602,,,val,hesrt,samples/GSE281759/GSM8627602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627603,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:A009,A009,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1565,36601,counts,pixel,4.015060633494461,platform_constant,True,H&E,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627603,,,val,hesrt,samples/GSE281759/GSM8627603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627604,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:A009,A009,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1329,36601,counts,pixel,3.8760854559127704,platform_constant,True,H&E,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627604,,,val,hesrt,samples/GSE281759/GSM8627604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8627605,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:A009,A009,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2356,36601,counts,pixel,4.015060633494461,platform_constant,True,H&E,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627605,,,val,hesrt,samples/GSE281759/GSM8627605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8627606,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:A009,A009,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1936,36601,counts,pixel,3.8760854559127704,platform_constant,True,H&E,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627606,,,val,hesrt,samples/GSE281759/GSM8627606,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8627607,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:B0013,B0013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1187,36601,counts,pixel,3.8760854559127704,platform_constant,True,H&E,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627607,,,val,hesrt,samples/GSE281759/GSM8627607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8627608,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:B0013,B0013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1265,36601,counts,pixel,3.8760854559127704,platform_constant,True,H&E,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627608,,,val,hesrt,samples/GSE281759/GSM8627608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627609,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:B0013,B0013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1485,36601,counts,pixel,4.015060633494471,platform_constant,True,H&E,4.015060633494471,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627609,,,val,hesrt,samples/GSE281759/GSM8627609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627610,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:B0013,B0013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1898,36601,counts,pixel,4.015060633494461,platform_constant,True,H&E,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627610,,,val,hesrt,samples/GSE281759/GSM8627610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627611,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:B0013,B0013,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1490,36601,counts,pixel,3.8760854559127704,platform_constant,True,H&E,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627611,,,val,hesrt,samples/GSE281759/GSM8627611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627612,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:C004,C004,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1489,36601,counts,pixel,3.8760854559127624,platform_constant,True,H&E,3.8760854559127624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627612,,,val,hesrt,samples/GSE281759/GSM8627612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8627613,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,female,extracted field,female,GSE281759:C004,C004,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,937,36601,counts,pixel,3.9828311742323046,platform_constant,True,H&E,3.9828311742323046,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627613,,,val,hesrt,samples/GSE281759/GSM8627613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627614,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:C008,C008,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2276,36601,counts,pixel,3.8760854559127624,platform_constant,True,H&E,3.8760854559127624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627614,,,val,hesrt,samples/GSE281759/GSM8627614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627615,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:C008,C008,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1310,36601,counts,pixel,3.876085455912768,platform_constant,True,H&E,3.876085455912768,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627615,,,val,hesrt,samples/GSE281759/GSM8627615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8627616,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:C008,C008,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1494,36601,counts,pixel,4.015060633494461,platform_constant,True,H&E,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627616,,,val,hesrt,samples/GSE281759/GSM8627616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8627617,GSE281759,GSE281759,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,not stated,luna,not stated,,male,extracted field,male,GSE281759:C008,C008,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1731,36601,counts,pixel,3.8760854559127633,platform_constant,True,H&E,3.8760854559127633,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627617,,,val,hesrt,samples/GSE281759/GSM8627617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8630048,GSE281796,GSE281796,A blueprint for local and distal glioblastoma invasion programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,invasion,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1986,68886,counts,pixel,4.4197672886271455,platform_constant,True,H&E,4.4197672886271455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41844611,,GSM8630048,,,test,hesrt,samples/GSE281796/GSM8630048,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8630049,GSE281796,GSE281796,A blueprint for local and distal glioblastoma invasion programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2330,68886,counts,pixel,4.420349133107466,platform_constant,True,H&E,4.420349133107466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41844611,,GSM8630049,,,test,hesrt,samples/GSE281796/GSM8630049,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8633891,GSE281978,GSE281978,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,HNSCC primary tumor,tumour tissue,MONDO:0021310;MONDO:0010150,malignant tumor of neck;head and neck squamous cell carcinoma,disease,luna,,"HPV-negative, PT2",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1187,36601,counts,pixel,3.9863462596350483,platform_constant,True,H&E,3.9863462596350483,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633891,,,train,hesrt,samples/GSE281978/GSM8633891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 0.99}",,
GSM8633892,GSE281978,GSE281978,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,HNSCC primary tumor,tumour tissue,MONDO:0021310;MONDO:0010150,malignant tumor of neck;head and neck squamous cell carcinoma,disease,luna,,"HPV-negative, LNMT2",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1579,36601,counts,pixel,3.892751871846451,platform_constant,True,H&E,3.892751871846451,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633892,,,train,hesrt,samples/GSE281978/GSM8633892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8633893,GSE281978,GSE281978,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,HNSCC primary tumor,tumour tissue,MONDO:0021310;MONDO:0010150,malignant tumor of neck;head and neck squamous cell carcinoma,disease,luna,,"HPV-positive, PT3",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1359,36601,counts,pixel,3.8560360020834157,platform_constant,True,H&E,3.8560360020834157,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633893,,,train,hesrt,samples/GSE281978/GSM8633893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 0.99}",,
GSM8633894,GSE281978,GSE281978,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,HNSCC primary tumor,tumour tissue,MONDO:0021310;MONDO:0010150,malignant tumor of neck;head and neck squamous cell carcinoma,disease,luna,,"HPV-positive, LNMT3",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1908,36601,counts,pixel,3.8675632995753024,platform_constant,True,H&E,3.8675632995753024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633894,,,train,hesrt,samples/GSE281978/GSM8633894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8633895,GSE281978,GSE281978,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,HNSCC primary tumor,tumour tissue,MONDO:0021310;MONDO:0010150,malignant tumor of neck;head and neck squamous cell carcinoma,disease,luna,,"HPV-negative, PT1",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1195,36601,counts,pixel,3.869164456483085,platform_constant,True,H&E,3.869164456483085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633895,,,train,hesrt,samples/GSE281978/GSM8633895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8633896,GSE281978,GSE281978,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,HNSCC primary tumor,tumour tissue,MONDO:0021310;MONDO:0010150,malignant tumor of neck;head and neck squamous cell carcinoma,disease,luna,,"HPV-negative, LNMT1",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1439,36601,counts,pixel,3.851873151854416,platform_constant,True,H&E,3.851873151854416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633896,,,train,hesrt,samples/GSE281978/GSM8633896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8634190,GSE282002,GSE282002,Cell competition drives bronchiolization and pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1821,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.177861091739469,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634190,,,val,sda-all,samples/GSE282002/GSM8634190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634191,GSE282002,GSE282002,Cell competition drives bronchiolization and pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2027,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.047435872186039,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634191,,,val,sda-all,samples/GSE282002/GSM8634191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8634192,GSE282002,GSE282002,Cell competition drives bronchiolization and pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3178,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.049741580714911,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634192,,,val,sda-all,samples/GSE282002/GSM8634192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634193,GSE282002,GSE282002,Cell competition drives bronchiolization and pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3963,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.064392169211595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634193,,,val,sda-all,samples/GSE282002/GSM8634193,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634194,GSE282002,GSE282002,Cell competition drives bronchiolization and pulmonary fibrosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3735,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.042369069617337,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634194,,,val,sda-all,samples/GSE282002/GSM8634194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634986,GSE282057,GSE282057,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0000376,hindlimb stylopod,ASPS thigh primary tumor,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,76899,18086,counts,um,1.0,verified,True,H&E-like (heuristic),3.73656463214597,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634986,,,train,sda-all,samples/GSE282057/GSM8634986,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8634987,GSE282057,GSE282057,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,ASPS lung needle biopsy,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,1700,18086,counts,um,1.0,verified,True,H&E-like (heuristic),0.5000146493582549,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634987,,,train,sda-all,samples/GSE282057/GSM8634987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634988,GSE282057,GSE282057,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,ASPS lung needle biopsy,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,3048,18086,counts,um,1.0,verified,True,H&E-like (heuristic),0.49996387393287484,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634988,,,train,sda-all,samples/GSE282057/GSM8634988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634989,GSE282057,GSE282057,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Intramuscular tumor of a PDX-derived ASPS cell line,xenograft,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,23134,18086,counts,um,1.0,verified,True,H&E-like (heuristic),0.8554409143218548,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634989,,,train,sda-all,samples/GSE282057/GSM8634989,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM8635038,GSE282059,GSE282059,"Nanostring CosMx 6,000-plex RNA profiling of human kidney nephrectomy specimens",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,"Ureteral obstruction (UUO, n=5) and healthy kidneys (n=2)",primary tissue,MONDO:0003329,ureteral obstruction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,523855,5749,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40399382,,GSM8635038,,,train,sda-all,samples/GSE282059/GSM8635038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8636483,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005101,ulcerative colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hColon_290g,xenium-1.6.0.8,cell,434666,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999930964653903,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM8636483,,,val,sda-all,samples/GSE282123/GSM8636483,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8636484,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hColon_290g,xenium-1.6.0.8,cell,424230,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000065413632201,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM8636484,,,val,sda-all,samples/GSE282123/GSM8636484,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282953,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hColon_112g,xenium-3.0.0.8,cell,372549,10870,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282953,,,val,sda-all,samples/GSE282123/GSM9282953,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282954,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005101,ulcerative colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hColon_290g,xenium-2.0.0.10,cell,424697,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998817407757806,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282954,,,val,sda-all,samples/GSE282123/GSM9282954,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282955,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005292,colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hColon_290g,xenium-2.0.0.10,cell,454968,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999447879858655,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282955,,,val,sda-all,samples/GSE282123/GSM9282955,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282956,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005101,ulcerative colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-3.3.0.1,cell,729135,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999884287454324,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282956,,,val,sda-all,samples/GSE282123/GSM9282956,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282957,GSE282123,GSE282123,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-3.3.0.1,cell,744823,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000016346279587,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282957,,,val,sda-all,samples/GSE282123/GSM9282957,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8636485,GSE282124,GSE282124,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Merscope]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,FFPE mucosal biopsies,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,Merscope,,,cell,124938,315,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,42262875,,GSM8636485,,,train,sda-all,samples/GSE282124/GSM8636485,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8637961,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3499,32286,counts,pixel,7.260528444724705,platform_constant,True,H&E,7.260528444724705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637961,,,train,hesrt,samples/GSE282203/GSM8637961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637962,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3697,32286,counts,pixel,7.6800004915200075,platform_constant,True,H&E,7.6800004915200075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637962,,,train,hesrt,samples/GSE282203/GSM8637962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637963,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3584,32286,counts,pixel,6.209523936198103,platform_constant,True,H&E,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637963,,,train,hesrt,samples/GSE282203/GSM8637963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637964,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3646,32286,counts,pixel,7.2605284447247005,platform_constant,True,H&E,7.2605284447247005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637964,,,train,hesrt,samples/GSE282203/GSM8637964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637965,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3552,32286,counts,pixel,6.209523936198103,platform_constant,True,H&E,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637965,,,train,hesrt,samples/GSE282203/GSM8637965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637966,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3546,32286,counts,pixel,6.954406997019029,platform_constant,True,H&E,6.954406997019029,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637966,,,train,hesrt,samples/GSE282203/GSM8637966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637967,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2980,32286,counts,pixel,6.209523936198103,platform_constant,True,H&E,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637967,,,train,hesrt,samples/GSE282203/GSM8637967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637968,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3556,32286,counts,pixel,7.260528444724705,platform_constant,True,H&E,7.260528444724705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637968,,,train,hesrt,samples/GSE282203/GSM8637968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637969,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3540,32286,counts,pixel,6.209523936198103,platform_constant,True,H&E,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637969,,,train,hesrt,samples/GSE282203/GSM8637969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637970,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3256,32286,counts,pixel,6.520000133008026,platform_constant,True,H&E,6.520000133008026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637970,,,train,hesrt,samples/GSE282203/GSM8637970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637971,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3672,32286,counts,pixel,6.209523936198103,platform_constant,True,H&E,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637971,,,train,hesrt,samples/GSE282203/GSM8637971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637972,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3583,32286,counts,pixel,6.520000133008026,platform_constant,True,H&E,6.520000133008026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637972,,,train,hesrt,samples/GSE282203/GSM8637972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637973,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3613,32286,counts,pixel,6.209523936198103,platform_constant,True,H&E,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637973,,,train,hesrt,samples/GSE282203/GSM8637973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637974,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3037,32286,counts,pixel,6.8631580347452585,platform_constant,True,H&E,6.8631580347452585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637974,,,train,hesrt,samples/GSE282203/GSM8637974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637975,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3709,32286,counts,pixel,6.520000133008002,platform_constant,True,H&E,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637975,,,train,hesrt,samples/GSE282203/GSM8637975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637976,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3440,32286,counts,pixel,7.680000491520041,platform_constant,True,H&E,7.680000491520041,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637976,,,train,hesrt,samples/GSE282203/GSM8637976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637977,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3559,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637977,,,train,hesrt,samples/GSE282203/GSM8637977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637978,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3580,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637978,,,train,hesrt,samples/GSE282203/GSM8637978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637979,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3559,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637979,,,train,hesrt,samples/GSE282203/GSM8637979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637980,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3672,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637980,,,train,hesrt,samples/GSE282203/GSM8637980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637981,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3579,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637981,,,train,hesrt,samples/GSE282203/GSM8637981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637982,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3583,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637982,,,train,hesrt,samples/GSE282203/GSM8637982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637983,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3590,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637983,,,train,hesrt,samples/GSE282203/GSM8637983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637984,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3713,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637984,,,train,hesrt,samples/GSE282203/GSM8637984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637985,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3247,32286,counts,pixel,18.64868975077581,platform_constant,True,H&E,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637985,,,train,hesrt,samples/GSE282203/GSM8637985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637986,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3137,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637986,,,train,hesrt,samples/GSE282203/GSM8637986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637987,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3853,32286,counts,pixel,18.64868975077581,platform_constant,True,H&E,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637987,,,train,hesrt,samples/GSE282203/GSM8637987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637988,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3678,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637988,,,train,hesrt,samples/GSE282203/GSM8637988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637989,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3889,32286,counts,pixel,19.1047152747337,platform_constant,True,H&E,19.1047152747337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637989,,,train,hesrt,samples/GSE282203/GSM8637989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637990,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3457,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637990,,,train,hesrt,samples/GSE282203/GSM8637990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637991,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3753,32286,counts,pixel,18.64868975077581,platform_constant,True,H&E,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637991,,,train,hesrt,samples/GSE282203/GSM8637991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637992,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,APP23,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3418,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637992,,,train,hesrt,samples/GSE282203/GSM8637992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637993,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3768,32286,counts,pixel,6.95440699701907,platform_constant,True,H&E,6.95440699701907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637993,,,train,hesrt,samples/GSE282203/GSM8637993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637994,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4045,32286,counts,pixel,6.520000133008002,platform_constant,True,H&E,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637994,,,train,hesrt,samples/GSE282203/GSM8637994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8637995,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3338,32286,counts,pixel,6.520000133008002,platform_constant,True,H&E,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637995,,,train,hesrt,samples/GSE282203/GSM8637995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637996,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4221,32286,counts,pixel,7.680000491520024,platform_constant,True,H&E,7.680000491520024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637996,,,train,hesrt,samples/GSE282203/GSM8637996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637997,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3344,32286,counts,pixel,7.260528444724758,platform_constant,True,H&E,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637997,,,train,hesrt,samples/GSE282203/GSM8637997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637998,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3740,32286,counts,pixel,6.520000133008002,platform_constant,True,H&E,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637998,,,train,hesrt,samples/GSE282203/GSM8637998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637999,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3431,32286,counts,pixel,7.6800004915200075,platform_constant,True,H&E,7.6800004915200075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637999,,,train,hesrt,samples/GSE282203/GSM8637999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638000,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3403,32286,counts,pixel,7.260528444724758,platform_constant,True,H&E,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638000,,,train,hesrt,samples/GSE282203/GSM8638000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638001,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3735,32286,counts,pixel,6.520000133008002,platform_constant,True,H&E,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638001,,,train,hesrt,samples/GSE282203/GSM8638001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638002,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3516,32286,counts,pixel,7.536842346442062,platform_constant,True,H&E,7.536842346442062,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638002,,,train,hesrt,samples/GSE282203/GSM8638002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638003,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3249,32286,counts,pixel,7.160000229119984,platform_constant,True,H&E,7.160000229119984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638003,,,train,hesrt,samples/GSE282203/GSM8638003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638004,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3805,32286,counts,pixel,7.260528444724758,platform_constant,True,H&E,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638004,,,train,hesrt,samples/GSE282203/GSM8638004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638005,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3533,32286,counts,pixel,7.151066975199488,platform_constant,True,H&E,7.151066975199488,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638005,,,train,hesrt,samples/GSE282203/GSM8638005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638006,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3473,32286,counts,pixel,6.954406997019084,platform_constant,True,H&E,6.954406997019084,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638006,,,train,hesrt,samples/GSE282203/GSM8638006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638007,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3434,32286,counts,pixel,7.160000229119984,platform_constant,True,H&E,7.160000229119984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638007,,,train,hesrt,samples/GSE282203/GSM8638007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638008,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,14 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3417,32286,counts,pixel,7.260528444724758,platform_constant,True,H&E,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638008,,,train,hesrt,samples/GSE282203/GSM8638008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638009,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3547,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638009,,,train,hesrt,samples/GSE282203/GSM8638009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638010,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2994,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638010,,,train,hesrt,samples/GSE282203/GSM8638010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638011,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3571,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638011,,,train,hesrt,samples/GSE282203/GSM8638011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638012,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4439,32286,counts,pixel,19.10471527473341,platform_constant,True,H&E,19.10471527473341,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638012,,,train,hesrt,samples/GSE282203/GSM8638012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638013,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3790,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638013,,,train,hesrt,samples/GSE282203/GSM8638013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638014,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3839,32286,counts,pixel,19.200001228800147,platform_constant,True,H&E,19.200001228800147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638014,,,train,hesrt,samples/GSE282203/GSM8638014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638015,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3774,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638015,,,train,hesrt,samples/GSE282203/GSM8638015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638016,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3678,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638016,,,train,hesrt,samples/GSE282203/GSM8638016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638017,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3371,32286,counts,pixel,18.64868975077581,platform_constant,True,H&E,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638017,,,train,hesrt,samples/GSE282203/GSM8638017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638018,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4089,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638018,,,train,hesrt,samples/GSE282203/GSM8638018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638019,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3860,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638019,,,train,hesrt,samples/GSE282203/GSM8638019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638020,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3119,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638020,,,train,hesrt,samples/GSE282203/GSM8638020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638021,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3232,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638021,,,train,hesrt,samples/GSE282203/GSM8638021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638022,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3237,32286,counts,pixel,19.10471527473341,platform_constant,True,H&E,19.10471527473341,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638022,,,train,hesrt,samples/GSE282203/GSM8638022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638023,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3725,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638023,,,train,hesrt,samples/GSE282203/GSM8638023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638024,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3657,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638024,,,train,hesrt,samples/GSE282203/GSM8638024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638025,GSE282203,GSE282203,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3775,32286,counts,pixel,19.200001228799938,platform_constant,True,H&E,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638025,,,train,hesrt,samples/GSE282203/GSM8638025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641003,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3150,19144,counts,pixel,3.988683011081388,platform_constant,True,H&E,3.988683011081388,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641003,,,train,hesrt,samples/GSE282302/GSM8641003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641004,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3826,19144,counts,pixel,4.020328180773349,platform_constant,True,H&E,4.020328180773349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641004,,,train,hesrt,samples/GSE282302/GSM8641004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641005,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3536,19144,counts,pixel,4.116695863365288,platform_constant,True,H&E,4.116695863365288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641005,,,train,hesrt,samples/GSE282302/GSM8641005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641006,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3664,19144,counts,pixel,4.05640377866306,platform_constant,True,H&E,4.05640377866306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641006,,,train,hesrt,samples/GSE282302/GSM8641006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641007,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4440,19144,counts,pixel,3.9676706393586105,platform_constant,True,H&E,3.9676706393586105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641007,,,train,hesrt,samples/GSE282302/GSM8641007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641008,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3706,19144,counts,pixel,3.988683011081379,platform_constant,True,H&E,3.988683011081379,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641008,,,train,hesrt,samples/GSE282302/GSM8641008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641009,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4105,19144,counts,pixel,4.025898047555061,platform_constant,True,H&E,4.025898047555061,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641009,,,train,hesrt,samples/GSE282302/GSM8641009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641010,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4647,19144,counts,pixel,4.057669575962961,platform_constant,True,H&E,4.057669575962961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641010,,,train,hesrt,samples/GSE282302/GSM8641010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641011,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3824,19144,counts,pixel,3.999189169151017,platform_constant,True,H&E,3.999189169151017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641011,,,train,hesrt,samples/GSE282302/GSM8641011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641012,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4261,19144,counts,pixel,3.978215142121785,platform_constant,True,H&E,3.978215142121785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641012,,,train,hesrt,samples/GSE282302/GSM8641012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641013,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3343,19144,counts,pixel,3.9886830110813514,platform_constant,True,H&E,3.9886830110813514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641013,,,train,hesrt,samples/GSE282302/GSM8641013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641014,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,1861,19144,counts,pixel,3.9993546036853544,platform_constant,True,H&E,3.9993546036853544,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641014,,,train,hesrt,samples/GSE282302/GSM8641014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641015,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2302,19144,counts,pixel,4.0203668311475305,platform_constant,True,H&E,4.0203668311475305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641015,,,train,hesrt,samples/GSE282302/GSM8641015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641016,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2141,19144,counts,pixel,3.9360634796841993,platform_constant,True,H&E,3.9360634796841993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641016,,,train,hesrt,samples/GSE282302/GSM8641016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641017,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2979,19144,counts,pixel,4.035429926823896,platform_constant,True,H&E,4.035429926823896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641017,,,train,hesrt,samples/GSE282302/GSM8641017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641018,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3119,19144,counts,pixel,3.98872135722725,platform_constant,True,H&E,3.98872135722725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641018,,,train,hesrt,samples/GSE282302/GSM8641018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641019,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3249,19144,counts,pixel,3.999227616300329,platform_constant,True,H&E,3.999227616300329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641019,,,train,hesrt,samples/GSE282302/GSM8641019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641020,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3923,19144,counts,pixel,4.066909991022587,platform_constant,True,H&E,4.066909991022587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641020,,,train,hesrt,samples/GSE282302/GSM8641020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641021,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3743,19144,counts,pixel,4.009860754768263,platform_constant,True,H&E,4.009860754768263,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641021,,,train,hesrt,samples/GSE282302/GSM8641021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641022,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3689,19144,counts,pixel,3.978215142121785,platform_constant,True,H&E,3.978215142121785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641022,,,train,hesrt,samples/GSE282302/GSM8641022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641023,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3671,19144,counts,pixel,4.057708585327462,platform_constant,True,H&E,4.057708585327462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641023,,,train,hesrt,samples/GSE282302/GSM8641023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641024,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3477,19144,counts,pixel,3.9939997523883704,platform_constant,True,H&E,3.9939997523883704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641024,,,train,hesrt,samples/GSE282302/GSM8641024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641025,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2387,19144,counts,pixel,4.086816343251943,platform_constant,True,H&E,4.086816343251943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641025,,,train,hesrt,samples/GSE282302/GSM8641025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641026,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3901,19144,counts,pixel,4.186310399854576,platform_constant,True,H&E,4.186310399854576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641026,,,train,hesrt,samples/GSE282302/GSM8641026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641027,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3760,19144,counts,pixel,4.002726878226908,platform_constant,True,H&E,4.002726878226908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641027,,,train,hesrt,samples/GSE282302/GSM8641027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641028,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4086,19144,counts,pixel,4.1115638092837195,platform_constant,True,H&E,4.1115638092837195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641028,,,train,hesrt,samples/GSE282302/GSM8641028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641029,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4305,19144,counts,pixel,3.9451518927521656,platform_constant,True,H&E,3.9451518927521656,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641029,,,train,hesrt,samples/GSE282302/GSM8641029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641030,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2572,19144,counts,pixel,4.1072707953331165,platform_constant,True,H&E,4.1072707953331165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641030,,,train,hesrt,samples/GSE282302/GSM8641030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8641031,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,1854,19144,counts,pixel,4.1389413274549645,platform_constant,True,H&E,4.1389413274549645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641031,,,train,hesrt,samples/GSE282302/GSM8641031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641032,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3379,19144,counts,pixel,4.3635807396797155,platform_constant,True,H&E,4.3635807396797155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641032,,,train,hesrt,samples/GSE282302/GSM8641032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641033,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3100,19144,counts,pixel,4.120402033426829,platform_constant,True,H&E,4.120402033426829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641033,,,train,hesrt,samples/GSE282302/GSM8641033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641034,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2516,19144,counts,pixel,4.29892609639909,platform_constant,True,H&E,4.29892609639909,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641034,,,train,hesrt,samples/GSE282302/GSM8641034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641035,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2508,19144,counts,pixel,4.091866822735055,platform_constant,True,H&E,4.091866822735055,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641035,,,train,hesrt,samples/GSE282302/GSM8641035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641036,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2255,19144,counts,pixel,4.16206802830189,platform_constant,True,H&E,4.16206802830189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641036,,,train,hesrt,samples/GSE282302/GSM8641036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641037,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2243,19144,counts,pixel,3.98858545794071,platform_constant,True,H&E,3.98858545794071,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641037,,,train,hesrt,samples/GSE282302/GSM8641037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641040,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3064,19144,counts,pixel,4.076968251989538,platform_constant,True,H&E,4.076968251989538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641040,,,train,hesrt,samples/GSE282302/GSM8641040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641041,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3345,19144,counts,pixel,4.086816343251924,platform_constant,True,H&E,4.086816343251924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641041,,,train,hesrt,samples/GSE282302/GSM8641041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641042,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3899,19144,counts,pixel,4.086816343251943,platform_constant,True,H&E,4.086816343251943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641042,,,train,hesrt,samples/GSE282302/GSM8641042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641044,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3419,19144,counts,pixel,4.534659850912342,platform_constant,True,H&E,4.534659850912342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641044,,,train,hesrt,samples/GSE282302/GSM8641044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641045,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3623,19144,counts,pixel,4.009544772666975,platform_constant,True,H&E,4.009544772666975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641045,,,train,hesrt,samples/GSE282302/GSM8641045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641046,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3733,19144,counts,pixel,3.991110508714546,platform_constant,True,H&E,3.991110508714546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641046,,,train,hesrt,samples/GSE282302/GSM8641046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8641047,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4210,19144,counts,pixel,3.979747326692424,platform_constant,True,H&E,3.979747326692424,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641047,,,train,hesrt,samples/GSE282302/GSM8641047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641048,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4154,19144,counts,pixel,4.421660603335733,platform_constant,True,H&E,4.421660603335733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641048,,,train,hesrt,samples/GSE282302/GSM8641048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641049,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2534,19144,counts,pixel,4.177724584352066,platform_constant,True,H&E,4.177724584352066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641049,,,train,hesrt,samples/GSE282302/GSM8641049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641050,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2487,19144,counts,pixel,3.936313232896295,platform_constant,True,H&E,3.936313232896295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641050,,,train,hesrt,samples/GSE282302/GSM8641050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641051,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2776,19144,counts,pixel,4.0335342246289025,platform_constant,True,H&E,4.0335342246289025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641051,,,train,hesrt,samples/GSE282302/GSM8641051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641052,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2694,19144,counts,pixel,3.998181293867032,platform_constant,True,H&E,3.998181293867032,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641052,,,train,hesrt,samples/GSE282302/GSM8641052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641053,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2364,19144,counts,pixel,3.979494577842634,platform_constant,True,H&E,3.979494577842634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641053,,,train,hesrt,samples/GSE282302/GSM8641053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641054,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2395,19144,counts,pixel,3.962323271167784,platform_constant,True,H&E,3.962323271167784,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641054,,,train,hesrt,samples/GSE282302/GSM8641054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641055,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2303,19144,counts,pixel,4.137878894925712,platform_constant,True,H&E,4.137878894925712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641055,,,train,hesrt,samples/GSE282302/GSM8641055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8641056,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2247,19144,counts,pixel,4.148767234101986,platform_constant,True,H&E,4.148767234101986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641056,,,train,hesrt,samples/GSE282302/GSM8641056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8641057,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2346,19144,counts,pixel,4.0385845800964395,platform_constant,True,H&E,4.0385845800964395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641057,,,train,hesrt,samples/GSE282302/GSM8641057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641058,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2375,19144,counts,pixel,3.9249501835961054,platform_constant,True,H&E,3.9249501835961054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641058,,,train,hesrt,samples/GSE282302/GSM8641058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641059,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4257,19144,counts,pixel,3.9621390268453593,platform_constant,True,H&E,3.9621390268453593,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641059,,,train,hesrt,samples/GSE282302/GSM8641059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641060,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3564,19144,counts,pixel,3.9263886251730096,platform_constant,True,H&E,3.9263886251730096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641060,,,train,hesrt,samples/GSE282302/GSM8641060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8641061,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3228,19144,counts,pixel,3.9363162351840923,platform_constant,True,H&E,3.9363162351840923,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641061,,,train,hesrt,samples/GSE282302/GSM8641061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8641062,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3568,19144,counts,pixel,3.9878350725232745,platform_constant,True,H&E,3.9878350725232745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641062,,,train,hesrt,samples/GSE282302/GSM8641062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641063,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4431,19144,counts,pixel,3.9935315978398167,platform_constant,True,H&E,3.9935315978398167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641063,,,train,hesrt,samples/GSE282302/GSM8641063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM8641064,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4300,19144,counts,pixel,3.9621390268453602,platform_constant,True,H&E,3.9621390268453602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641064,,,train,hesrt,samples/GSE282302/GSM8641064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8641065,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4270,19144,counts,pixel,3.983151964424773,platform_constant,True,H&E,3.983151964424773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641065,,,train,hesrt,samples/GSE282302/GSM8641065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641066,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3775,19144,counts,pixel,3.9830251265614285,platform_constant,True,H&E,3.9830251265614285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641066,,,train,hesrt,samples/GSE282302/GSM8641066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641067,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3337,19144,counts,pixel,3.951632793775664,platform_constant,True,H&E,3.951632793775664,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641067,,,train,hesrt,samples/GSE282302/GSM8641067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641068,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4145,19144,counts,pixel,4.143784132125744,platform_constant,True,H&E,4.143784132125744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641068,,,train,hesrt,samples/GSE282302/GSM8641068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641069,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3240,19144,counts,pixel,3.993658223745644,platform_constant,True,H&E,3.993658223745644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641069,,,train,hesrt,samples/GSE282302/GSM8641069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641070,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3295,19144,counts,pixel,4.068467810807136,platform_constant,True,H&E,4.068467810807136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641070,,,train,hesrt,samples/GSE282302/GSM8641070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641071,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3498,19144,counts,pixel,4.014544272414712,platform_constant,True,H&E,4.014544272414712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641071,,,train,hesrt,samples/GSE282302/GSM8641071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641072,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2590,19144,counts,pixel,4.043910920763264,platform_constant,True,H&E,4.043910920763264,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641072,,,train,hesrt,samples/GSE282302/GSM8641072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641073,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3477,19144,counts,pixel,3.993658223745626,platform_constant,True,H&E,3.993658223745626,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641073,,,train,hesrt,samples/GSE282302/GSM8641073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641074,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2691,19144,counts,pixel,4.159733603386881,platform_constant,True,H&E,4.159733603386881,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641074,,,train,hesrt,samples/GSE282302/GSM8641074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641075,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2783,19144,counts,pixel,4.004164574345208,platform_constant,True,H&E,4.004164574345208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641075,,,train,hesrt,samples/GSE282302/GSM8641075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641076,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2470,19144,counts,pixel,4.004177406129048,platform_constant,True,H&E,4.004177406129048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641076,,,train,hesrt,samples/GSE282302/GSM8641076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641077,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2559,19144,counts,pixel,4.014557137461431,platform_constant,True,H&E,4.014557137461431,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641077,,,train,hesrt,samples/GSE282302/GSM8641077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8641078,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2684,19144,counts,pixel,3.993544395549137,platform_constant,True,H&E,3.993544395549137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641078,,,train,hesrt,samples/GSE282302/GSM8641078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641079,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3089,19144,counts,pixel,4.061467020805752,platform_constant,True,H&E,4.061467020805752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641079,,,train,hesrt,samples/GSE282302/GSM8641079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641080,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2672,19144,counts,pixel,4.061467020805734,platform_constant,True,H&E,4.061467020805734,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641080,,,train,hesrt,samples/GSE282302/GSM8641080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641081,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3089,19144,counts,pixel,4.116656286918105,platform_constant,True,H&E,4.116656286918105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641081,,,train,hesrt,samples/GSE282302/GSM8641081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8641082,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3364,19144,counts,pixel,4.024758781142124,platform_constant,True,H&E,4.024758781142124,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641082,,,train,hesrt,samples/GSE282302/GSM8641082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641083,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3340,19144,counts,pixel,4.097708435801431,platform_constant,True,H&E,4.097708435801431,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641083,,,train,hesrt,samples/GSE282302/GSM8641083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641084,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3177,19144,counts,pixel,3.9813795988779765,platform_constant,True,H&E,3.9813795988779765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641084,,,train,hesrt,samples/GSE282302/GSM8641084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641085,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3862,19144,counts,pixel,4.04593635481292,platform_constant,True,H&E,4.04593635481292,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641085,,,train,hesrt,samples/GSE282302/GSM8641085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641086,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,1940,19144,counts,pixel,4.020113763774046,platform_constant,True,H&E,4.020113763774046,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641086,,,train,hesrt,samples/GSE282302/GSM8641086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641087,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2927,19144,counts,pixel,3.9935315978398074,platform_constant,True,H&E,3.9935315978398074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641087,,,train,hesrt,samples/GSE282302/GSM8641087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641088,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4060,19144,counts,pixel,4.014544272414712,platform_constant,True,H&E,4.014544272414712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641088,,,train,hesrt,samples/GSE282302/GSM8641088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM8641089,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2364,19144,counts,pixel,4.035429926823896,platform_constant,True,H&E,4.035429926823896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641089,,,train,hesrt,samples/GSE282302/GSM8641089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641090,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3894,19144,counts,pixel,4.00441936691234,platform_constant,True,H&E,4.00441936691234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641090,,,train,hesrt,samples/GSE282302/GSM8641090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641091,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3577,19144,counts,pixel,4.061506066677896,platform_constant,True,H&E,4.061506066677896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641091,,,train,hesrt,samples/GSE282302/GSM8641091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641092,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3040,19144,counts,pixel,4.061506066677896,platform_constant,True,H&E,4.061506066677896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641092,,,train,hesrt,samples/GSE282302/GSM8641092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8641093,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3091,19144,counts,pixel,4.043277984841253,platform_constant,True,H&E,4.043277984841253,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641093,,,train,hesrt,samples/GSE282302/GSM8641093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641094,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3347,19144,counts,pixel,4.079986827282776,platform_constant,True,H&E,4.079986827282776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641094,,,train,hesrt,samples/GSE282302/GSM8641094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641095,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3509,19144,counts,pixel,4.095429830501896,platform_constant,True,H&E,4.095429830501896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641095,,,train,hesrt,samples/GSE282302/GSM8641095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641096,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4216,19144,counts,pixel,4.063762678319425,platform_constant,True,H&E,4.063762678319425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641096,,,train,hesrt,samples/GSE282302/GSM8641096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641097,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3336,19144,counts,pixel,4.063277984338962,platform_constant,True,H&E,4.063277984338962,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641097,,,train,hesrt,samples/GSE282302/GSM8641097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641098,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2649,19144,counts,pixel,4.106439329901525,platform_constant,True,H&E,4.106439329901525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641098,,,train,hesrt,samples/GSE282302/GSM8641098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641099,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,2760,19144,counts,pixel,3.9993546036853727,platform_constant,True,H&E,3.9993546036853727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641099,,,train,hesrt,samples/GSE282302/GSM8641099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641100,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3147,19144,counts,pixel,4.05201226698438,platform_constant,True,H&E,4.05201226698438,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641100,,,train,hesrt,samples/GSE282302/GSM8641100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641101,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3651,19144,counts,pixel,4.0203668311475305,platform_constant,True,H&E,4.0203668311475305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641101,,,train,hesrt,samples/GSE282302/GSM8641101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641102,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4152,19144,counts,pixel,3.9350881976691365,platform_constant,True,H&E,3.9350881976691365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641102,,,train,hesrt,samples/GSE282302/GSM8641102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641103,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3840,19144,counts,pixel,4.090856921359118,platform_constant,True,H&E,4.090856921359118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641103,,,train,hesrt,samples/GSE282302/GSM8641103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641104,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4561,19144,counts,pixel,4.060049271516082,platform_constant,True,H&E,4.060049271516082,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641104,,,train,hesrt,samples/GSE282302/GSM8641104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641105,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,4399,19144,counts,pixel,4.136816112781218,platform_constant,True,H&E,4.136816112781218,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641105,,,train,hesrt,samples/GSE282302/GSM8641105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641106,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3094,19144,counts,pixel,4.144644158690165,platform_constant,True,H&E,4.144644158690165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641106,,,train,hesrt,samples/GSE282302/GSM8641106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641107,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3571,19144,counts,pixel,4.330247698226404,platform_constant,True,H&E,4.330247698226404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641107,,,train,hesrt,samples/GSE282302/GSM8641107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8641108,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3996,19144,counts,pixel,4.293884765081034,platform_constant,True,H&E,4.293884765081034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641108,,,train,hesrt,samples/GSE282302/GSM8641108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641109,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3156,19144,counts,pixel,4.100452681821582,platform_constant,True,H&E,4.100452681821582,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641109,,,train,hesrt,samples/GSE282302/GSM8641109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641110,GSE282302+GSE310353,GSE282302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,"post-neoadjuvant, resected PDAC tumor",tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium for FFPE,,,spot,3064,19144,counts,pixel,4.477302668532266,platform_constant,True,H&E,4.477302668532266,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641110,,,train,hesrt,samples/GSE282302/GSM8641110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8645793,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,741,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.14967109386816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645793,,,train,sda-all,samples/GSE282547/GSM8645793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645794,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,621,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.141410479219055,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645794,,,train,sda-all,samples/GSE282547/GSM8645794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM8645795,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1293,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.154472187548012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645795,,,train,sda-all,samples/GSE282547/GSM8645795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645796,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,664,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.146948530848197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645796,,,train,sda-all,samples/GSE282547/GSM8645796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM8645797,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,708,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.455648664924703,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645797,,,train,sda-all,samples/GSE282547/GSM8645797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM8645798,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,849,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.44718107508083,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645798,,,train,sda-all,samples/GSE282547/GSM8645798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8645799,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,456,32285,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.45234912221202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645799,,,train,sda-all,samples/GSE282547/GSM8645799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8645800,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,243,32285,counts,um,1.0,verified,True,undetermined,4.447167146742192,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645800,,,train,sda-all,samples/GSE282547/GSM8645800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645801,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5563,23422,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645801,,,train,sda-all,samples/GSE282547/GSM8645801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645802,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,2498,20863,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645802,,,train,sda-all,samples/GSE282547/GSM8645802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8645803,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,7538,24860,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645803,,,train,sda-all,samples/GSE282547/GSM8645803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645804,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,9444,25493,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645804,,,train,sda-all,samples/GSE282547/GSM8645804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645805,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5524,24848,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645805,,,train,sda-all,samples/GSE282547/GSM8645805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645806,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,tamoxifen,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,19780,29755,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645806,,,train,sda-all,samples/GSE282547/GSM8645806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8645807,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,perturbation,luna,,tamoxifen,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,21639,30069,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM8645807,,,train,sda-all,samples/GSE282547/GSM8645807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9065771,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,21975,22731,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM9065771,,,train,sda-all,samples/GSE282547/GSM9065771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9065772,GSE282547,GSE282547,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,CD1 wildtype,embryonic,luna,embryonic,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,18028,21471,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42141139,,GSM9065772,,,train,sda-all,samples/GSE282547/GSM9065772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647873,GSE242821+GSE282635,GSE282635,Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0004994,cardiomyopathy,disease,luna,mitochondrial cardiomyopathy,mitochondrial cardiomyopathy,not stated,luna,not stated,,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,400,18085,counts,pixel,2.7634184595142433,platform_constant,True,H&E,2.7634184595142433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40184463,,GSM8647873,,,train,hesrt,samples/GSE282635/GSM8647873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8647884,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1620,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647884,,,train,sda-all,samples/GSE282639/GSM8647884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647885,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,4605,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647885,,,train,sda-all,samples/GSE282639/GSM8647885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647886,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1933,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647886,,,train,sda-all,samples/GSE282639/GSM8647886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647887,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2437,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647887,,,train,sda-all,samples/GSE282639/GSM8647887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647888,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3542,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647888,,,train,sda-all,samples/GSE282639/GSM8647888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647889,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1254,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647889,,,train,sda-all,samples/GSE282639/GSM8647889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8647890,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2365,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647890,,,train,sda-all,samples/GSE282639/GSM8647890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647891,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2879,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647891,,,train,sda-all,samples/GSE282639/GSM8647891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647892,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3559,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647892,,,train,sda-all,samples/GSE282639/GSM8647892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647893,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,4045,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647893,,,train,sda-all,samples/GSE282639/GSM8647893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647894,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2753,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647894,,,train,sda-all,samples/GSE282639/GSM8647894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647895,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2958,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647895,,,train,sda-all,samples/GSE282639/GSM8647895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647896,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1320,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647896,,,train,sda-all,samples/GSE282639/GSM8647896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8647897,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2785,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647897,,,train,sda-all,samples/GSE282639/GSM8647897,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647898,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3973,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647898,,,train,sda-all,samples/GSE282639/GSM8647898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647899,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2682,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647899,,,train,sda-all,samples/GSE282639/GSM8647899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647900,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2862,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647900,,,train,sda-all,samples/GSE282639/GSM8647900,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8647901,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3757,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647901,,,train,sda-all,samples/GSE282639/GSM8647901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647902,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2015,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647902,,,train,sda-all,samples/GSE282639/GSM8647902,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647903,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,4093,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647903,,,train,sda-all,samples/GSE282639/GSM8647903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8647904,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3299,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647904,,,train,sda-all,samples/GSE282639/GSM8647904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647905,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1140,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647905,,,train,sda-all,samples/GSE282639/GSM8647905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647906,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1561,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647906,,,train,sda-all,samples/GSE282639/GSM8647906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647907,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1660,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647907,,,train,sda-all,samples/GSE282639/GSM8647907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647908,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2583,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647908,,,train,sda-all,samples/GSE282639/GSM8647908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647909,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3562,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647909,,,train,sda-all,samples/GSE282639/GSM8647909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8647910,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1752,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647910,,,train,sda-all,samples/GSE282639/GSM8647910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647911,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2523,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647911,,,train,sda-all,samples/GSE282639/GSM8647911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647912,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2321,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647912,,,train,sda-all,samples/GSE282639/GSM8647912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647913,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3151,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647913,,,train,sda-all,samples/GSE282639/GSM8647913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647914,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2979,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647914,,,train,sda-all,samples/GSE282639/GSM8647914,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647915,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,4140,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647915,,,train,sda-all,samples/GSE282639/GSM8647915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647916,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3919,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647916,,,train,sda-all,samples/GSE282639/GSM8647916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647917,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2632,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647917,,,train,sda-all,samples/GSE282639/GSM8647917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647918,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2848,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647918,,,train,sda-all,samples/GSE282639/GSM8647918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647919,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,IPF,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1174,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647919,,,train,sda-all,samples/GSE282639/GSM8647919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647920,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1354,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647920,,,train,sda-all,samples/GSE282639/GSM8647920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647921,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2075,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647921,,,train,sda-all,samples/GSE282639/GSM8647921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647922,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2836,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647922,,,train,sda-all,samples/GSE282639/GSM8647922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647923,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3712,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647923,,,train,sda-all,samples/GSE282639/GSM8647923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647924,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,1302,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647924,,,train,sda-all,samples/GSE282639/GSM8647924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647925,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,2659,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647925,,,train,sda-all,samples/GSE282639/GSM8647925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8647926,GSE282639,GSE282639,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung tissue FFPE,primary tissue,,,normal,luna,Control,GT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,3004,985,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647926,,,train,sda-all,samples/GSE282639/GSM8647926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8649279,GSE282714,GSE282714,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,952082,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40112778,,GSM8649279,,,train,sda-all,samples/GSE282714/GSM8649279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8649280,GSE282714,GSE282714,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1099313,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40112778,,GSM8649280,,,train,sda-all,samples/GSE282714/GSM8649280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8649281,GSE282714,GSE282714,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,432868,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40112778,,GSM8649281,,,train,sda-all,samples/GSE282714/GSM8649281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.6000000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8649282,GSE282714,GSE282714,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,tonsil,luna,UBERON:0002372,tonsil,tonsil,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,827160,462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40112778,,GSM8649282,,,train,sda-all,samples/GSE282714/GSM8649282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.77, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8649283,GSE282714,GSE282714,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,817849,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40112778,,GSM8649283,,,train,sda-all,samples/GSE282714/GSM8649283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8649284,GSE282714,GSE282714,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,1255696,180,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,40112778,,GSM8649284,,,train,sda-all,samples/GSE282714/GSM8649284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8649315,GSE282721,GSE282721,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,prostate,luna,UBERON:0002367,prostate gland,prostate cancer,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,140337,980,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41904157,,GSM8649315,,,train,sda-all,samples/GSE282721/GSM8649315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8649343,GSE282726,GSE282726,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,,"PbCre4:Ptenf/f (P), Intact",neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1754,19465,counts,pixel,4.476851405589144,platform_constant,True,H&E,4.476851405589144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649343,,,train,hesrt,samples/GSE282726/GSM8649343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8649344,GSE282726,GSE282726,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,,"PbCre4:Ptenf/fFoxa1f/f (PF), Intact",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2965,19465,counts,pixel,4.429215443195834,platform_constant,True,H&E,4.429215443195834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649344,,,train,hesrt,samples/GSE282726/GSM8649344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8649345,GSE282726,GSE282726,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,,"PbCre4:Ptenf/f (P), Intact",neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3465,19465,counts,pixel,4.390651542239305,platform_constant,True,H&E,4.390651542239305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649345,,,train,hesrt,samples/GSE282726/GSM8649345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8649346,GSE282726,GSE282726,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,,"PbCre4:Ptenf/fFoxa1f/f (PF), Intact",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3903,19465,counts,pixel,4.429039344050271,platform_constant,True,H&E,4.429039344050271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649346,,,train,hesrt,samples/GSE282726/GSM8649346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8651758,GSE282867,GSE282867,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,brain,luna,UBERON:8440032,prelimbic area,Left prelimbic cortex,primary tissue,,,perturbation,luna,,iTBS & Control,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,cell,4586,32286,counts,pixel,,unresolved,False,,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-75e604816e85,library_alias,GSM8651759,train,sda-all,samples/GSE282867/GSM8651758,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8651760,GSE282867,GSE282867,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,brain,luna,UBERON:8440032,prelimbic area,Left prelimbic cortex,primary tissue,,,perturbation,luna,,iTBS & Control,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,cell,5027,32286,counts,pixel,,unresolved,False,,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-6c9423d585b4,library_alias,GSM8651761,train,sda-all,samples/GSE282867/GSM8651760,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8651762,GSE282867,GSE282867,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,brain,luna,UBERON:8440032,prelimbic area,Left prelimbic cortex,primary tissue,,,perturbation,luna,,iTBS & Control,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,cell,5621,32286,counts,pixel,,unresolved,False,,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-719a8759cd58,library_alias,GSM8651763,train,sda-all,samples/GSE282867/GSM8651762,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8651764,GSE282867,GSE282867,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,brain,luna,UBERON:8440032,prelimbic area,Left prelimbic cortex,primary tissue,,,perturbation,luna,,iTBS & Control,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,cell,5582,32286,counts,pixel,,unresolved,False,,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-2bbe47327512,library_alias,GSM8651765,train,sda-all,samples/GSE282867/GSM8651764,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8651766,GSE282867,GSE282867,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,brain,luna,UBERON:8440032,prelimbic area,Left prelimbic cortex,primary tissue,,,perturbation,luna,,iTBS & Control,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,cell,4072,32286,counts,pixel,,unresolved,False,,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-bff85e71370f,library_alias,GSM8651767,train,sda-all,samples/GSE282867/GSM8651766,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8653128,GSE282928,GSE282928,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,lecanemab Immunized AD (LCMB),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,9630552,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40050704,,GSM8653128,,,train,sda-all,samples/GSE282928/GSM8653128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8653129,GSE282928,GSE282928,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-immunized AD (nAD3),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,10290316,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40050704,,GSM8653129,,,train,sda-all,samples/GSE282928/GSM8653129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8653130,GSE282928,GSE282928,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,MONDO:0004975;MONDO:0019065,Alzheimer disease;amyloidosis,disease,luna,,Non-immunized AD (nAD4),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,10738844,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40050704,,GSM8653130,,,train,sda-all,samples/GSE282928/GSM8653130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8654772,GSE283022,GSE283022,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0001416,skin of abdomen,Skin punch biopsy,primary tissue,,,normal,luna,,Healthy Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3048,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.983726499125532,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41743834,,GSM8654772,,,train,sda-all,samples/GSE283022/GSM8654772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8654773,GSE283022,GSE283022,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,disease,luna,,Patient 1: Skin Lesion 1 (ISG15 Deficiency),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1066,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.982300488843396,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,,41743834,,GSM8654773,,,train,sda-all,samples/GSE283022/GSM8654773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8654774,GSE283022,GSE283022,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,disease,luna,,Patient 1: Skin Lesion 2 (ISG15 Deficiency),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,589,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.885455551409343,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41743834,,GSM8654774,,,train,sda-all,samples/GSE283022/GSM8654774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8654775,GSE283022,GSE283022,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin punch biopsy,primary tissue,,,disease,luna,,Patient 1: Skin Lesion 3 (ISG15 Deficiency),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2615,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.8865053825917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41743834,,GSM8654775,,,train,sda-all,samples/GSE283022/GSM8654775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8655157,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2771,36601,counts,pixel,4.235294144752938,platform_constant,True,H&E,4.235294144752938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655157,,,train,hesrt,samples/GSE283052/GSM8655157,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655158,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2230,36601,counts,pixel,4.719444192190134,platform_constant,True,H&E,4.719444192190134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655158,,,train,hesrt,samples/GSE283052/GSM8655158,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655159,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,947,36601,counts,pixel,4.367769607517362,platform_constant,True,H&E,4.367769607517362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655159,,,train,hesrt,samples/GSE283052/GSM8655159,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8655160,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2194,36601,counts,pixel,4.373147998061695,platform_constant,True,H&E,4.373147998061695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655160,,,train,hesrt,samples/GSE283052/GSM8655160,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8655161,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2315,36601,counts,pixel,4.129629751866685,platform_constant,True,H&E,4.129629751866685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655161,,,train,hesrt,samples/GSE283052/GSM8655161,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655162,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2465,36601,counts,pixel,4.168292831767897,platform_constant,True,H&E,4.168292831767897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655162,,,train,hesrt,samples/GSE283052/GSM8655162,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655163,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2670,36601,counts,pixel,4.245624940267532,platform_constant,True,H&E,4.245624940267532,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655163,,,train,hesrt,samples/GSE283052/GSM8655163,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8655164,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1809,36601,counts,pixel,4.268714949828857,platform_constant,True,H&E,4.268714949828857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655164,,,train,hesrt,samples/GSE283052/GSM8655164,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8655165,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2715,36601,counts,pixel,4.235294144752938,platform_constant,True,H&E,4.235294144752938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655165,,,train,hesrt,samples/GSE283052/GSM8655165,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8655166,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2224,36601,counts,pixel,4.364705865767049,platform_constant,True,H&E,4.364705865767049,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655166,,,train,hesrt,samples/GSE283052/GSM8655166,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655167,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1691,36601,counts,pixel,4.133333276458693,platform_constant,True,H&E,4.133333276458693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655167,,,train,hesrt,samples/GSE283052/GSM8655167,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8655168,GSE283052,GSE283052,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,CRC,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,colorectal cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2735,36601,counts,pixel,4.599074071360612,platform_constant,True,H&E,4.599074071360612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655168,,,train,hesrt,samples/GSE283052/GSM8655168,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656735,GSE283145,GSE283145,Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,FFPE skin sample of left dorsal region,primary tissue,MONDO:0015760,T-cell non-Hodgkin lymphoma,disease,mondo_predicate (Luna: perturbation),T-cell lymphoma,CAR T cell (cilta-cel),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1702,36946,counts,pixel,0.7349663619190216,platform_constant,True,H&E,0.7349663619190216,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8656735,,,train,hesrt,samples/GSE283145/GSM8656735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.28, ""uberon"": 0.76, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8656736,GSE283145,GSE283145,Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,FFPE skin sample of left dorsal region,primary tissue,MONDO:0015760,T-cell non-Hodgkin lymphoma,disease,luna,T-cell lymphoma,CAR T cell (cilta-cel),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1921,36946,counts,pixel,0.7345751924604554,platform_constant,True,H&E,0.7345751924604554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8656736,,,train,hesrt,samples/GSE283145/GSM8656736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.56, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8656737,GSE283145,GSE283145,Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001075,bony vertebral centrum,extramedullary disease (lumbar vertebral body),tumour tissue,MONDO:0018908,non-Hodgkin lymphoma,disease,luna,T-cell lymphoma,no CAR T cell,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,793,36946,counts,pixel,0.7346349264656855,platform_constant,True,H&E,0.7346349264656855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8656737,,,train,hesrt,samples/GSE283145/GSM8656737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656982,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,23123,39951,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656982,,,train,sda-all,samples/GSE283159/GSM8656982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656983,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,102092,33876,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656983,,,train,sda-all,samples/GSE283159/GSM8656983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656984,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,30881,36836,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656984,,,train,sda-all,samples/GSE283159/GSM8656984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8656985,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Edu injection,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,324057,37631,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656985,,,train,sda-all,samples/GSE283159/GSM8656985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8656986,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Edu injection,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,369122,39044,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656986,,,train,sda-all,samples/GSE283159/GSM8656986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8656987,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Edu injection,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,341021,37141,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656987,,,train,sda-all,samples/GSE283159/GSM8656987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8656988,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Edu injection,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,329515,36399,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8656988,,,train,sda-all,samples/GSE283159/GSM8656988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8831477,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Edu injection,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,329793,37067,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM8831477,,,train,sda-all,samples/GSE283159/GSM8831477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9421073,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,Edu injection,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,267066,40434,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM9421073,,,train,sda-all,samples/GSE283159/GSM9421073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9421074,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,Edu injection,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,265724,39007,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM9421074,,,train,sda-all,samples/GSE283159/GSM9421074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9421075,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,perturbation,luna,,Edu injection,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,266310,38227,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM9421075,,,train,sda-all,samples/GSE283159/GSM9421075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9421076,GSE283159,GSE283159,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Edu injection,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,259438,37024,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41895283,,GSM9421076,,,train,sda-all,samples/GSE283159/GSM9421076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8658290,GSE283227,GSE283227,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,metastasis,MONDO:0005082,prostate adenocarcinoma,disease,luna,metastatic prostate adenocarcinoma,CDK12 mutated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,363429,18085,counts,um,1.0,verified,True,H&E,1.2266338952992892,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658290,,,train,sda-all,samples/GSE283227/GSM8658290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8658291,GSE283227,GSE283227,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph node,metastasis,MONDO:0005082,prostate adenocarcinoma,disease,luna,metastatic prostate adenocarcinoma,CDK12 mutated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,79789,18085,counts,um,1.0,verified,True,H&E,1.548035176839189,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658291,,,train,sda-all,samples/GSE283227/GSM8658291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8658292,GSE283227,GSE283227,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph node,metastasis,MONDO:0005082,prostate adenocarcinoma,disease,luna,metastatic prostate adenocarcinoma,CDK12 WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,167254,18085,counts,um,1.0,verified,True,H&E,2.5242717233250325,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658292,,,train,sda-all,samples/GSE283227/GSM8658292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8658293,GSE283227,GSE283227,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph node,metastasis,MONDO:0005082,prostate adenocarcinoma,disease,luna,metastatic prostate adenocarcinoma,CDK12 WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,162379,18085,counts,um,1.0,verified,True,H&E,1.602510751802372,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658293,,,train,sda-all,samples/GSE283227/GSM8658293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8658911,GSE283269,GSE283269,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,DIT Coronary Artery,primary tissue,,,normal,luna,,from autopsies,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,799,18085,counts,pixel,2.39891337385556,platform_constant,True,H&E,2.39891337385556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658911,,,test,hesrt,samples/GSE283269/GSM8658911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8658912,GSE283269,GSE283269,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,DIT Coronary Artery,primary tissue,,,normal,luna,,from autopsies,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,732,18085,counts,pixel,2.714129403092834,platform_constant,True,H&E,2.714129403092834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658912,,,test,hesrt,samples/GSE283269/GSM8658912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658913,GSE283269,GSE283269,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,DIT Coronary Artery,primary tissue,,,disease,luna,,from autopsies,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1741,18085,counts,pixel,3.047169045553469,platform_constant,True,H&E,3.047169045553469,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658913,,,test,hesrt,samples/GSE283269/GSM8658913,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658914,GSE283269,GSE283269,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,DIT Coronary Artery,primary tissue,,,disease,luna,,from freshly explanted hearts,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,999,18085,counts,pixel,2.694625564434662,platform_constant,True,H&E,2.694625564434662,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658914,,,test,hesrt,samples/GSE283269/GSM8658914,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658915,GSE283269,GSE283269,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,DIT Coronary Artery,primary tissue,,,normal,luna,,from freshly explanted hearts,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1359,18085,counts,pixel,3.1711050793623765,platform_constant,True,H&E,3.1711050793623765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658915,,,test,hesrt,samples/GSE283269/GSM8658915,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658916,GSE283269,GSE283269,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,DIT Coronary Artery,primary tissue,,,normal,luna,,from freshly explanted hearts,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,952,18085,counts,pixel,2.904637984457073,platform_constant,True,H&E,2.904637984457073,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658916,,,test,hesrt,samples/GSE283269/GSM8658916,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659160,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3051,32285,counts,um,1.0,verified,True,H&E,4.061337527690202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659160,,,test,sda-all,samples/GSE283283/GSM8659160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659161,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2917,32285,counts,um,1.0,verified,True,H&E,4.079650024804434,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659161,,,test,sda-all,samples/GSE283283/GSM8659161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659162,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2870,32285,counts,um,1.0,verified,True,H&E,4.096597327861834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659162,,,test,sda-all,samples/GSE283283/GSM8659162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659163,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2493,32285,counts,um,1.0,verified,True,H&E,3.9994093648481184,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659163,,,test,sda-all,samples/GSE283283/GSM8659163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659164,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2214,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.020913427001122,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659164,,,test,sda-all,samples/GSE283283/GSM8659164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659165,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3219,32285,counts,um,1.0,verified,True,H&E,3.995006980606368,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659165,,,test,sda-all,samples/GSE283283/GSM8659165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659166,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2665,32285,counts,um,1.0,verified,True,H&E,4.005304742036996,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659166,,,test,sda-all,samples/GSE283283/GSM8659166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659167,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1032,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.9872695607369173,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659167,,,test,sda-all,samples/GSE283283/GSM8659167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659168,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2773,32285,counts,um,1.0,verified,True,H&E,4.052053105511029,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659168,,,test,sda-all,samples/GSE283283/GSM8659168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659169,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2799,32285,counts,um,1.0,verified,True,H&E,4.030167548135657,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659169,,,test,sda-all,samples/GSE283283/GSM8659169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659170,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2647,32285,counts,um,1.0,verified,True,H&E,4.127875593632909,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659170,,,test,sda-all,samples/GSE283283/GSM8659170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659171,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2320,32285,counts,um,1.0,verified,True,H&E,3.9852448168859222,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659171,,,test,sda-all,samples/GSE283283/GSM8659171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659172,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2064,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.0162838805809145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659172,,,test,sda-all,samples/GSE283283/GSM8659172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659173,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3163,32285,counts,um,1.0,verified,True,H&E,4.014430204865883,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659173,,,test,sda-all,samples/GSE283283/GSM8659173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659174,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2976,32285,counts,um,1.0,verified,True,H&E,4.0153281596841754,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659174,,,test,sda-all,samples/GSE283283/GSM8659174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659175,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1993,32285,counts,um,1.0,verified,True,H&E,3.979841000495759,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659175,,,test,sda-all,samples/GSE283283/GSM8659175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659176,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,916,32285,counts,um,1.0,verified,True,H&E,4.0180906092726785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659176,,,test,sda-all,samples/GSE283283/GSM8659176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659177,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2333,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.029211787317144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659177,,,test,sda-all,samples/GSE283283/GSM8659177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659178,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3059,32285,counts,um,1.0,verified,True,H&E,4.021103656322361,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659178,,,test,sda-all,samples/GSE283283/GSM8659178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659179,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3221,32285,counts,um,1.0,verified,True,H&E,4.008234930794761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659179,,,test,sda-all,samples/GSE283283/GSM8659179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659180,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1766,32285,counts,um,1.0,verified,True,H&E,4.004307291924765,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659180,,,test,sda-all,samples/GSE283283/GSM8659180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659181,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,572,32285,counts,um,1.0,verified,True,H&E,4.021334872913344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659181,,,test,sda-all,samples/GSE283283/GSM8659181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659182,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2835,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.042111357124931,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659182,,,test,sda-all,samples/GSE283283/GSM8659182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659183,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2745,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.038919627461689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659183,,,test,sda-all,samples/GSE283283/GSM8659183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659184,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2693,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.0357505012199475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659184,,,test,sda-all,samples/GSE283283/GSM8659184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659185,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2492,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.0340283609126155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659185,,,test,sda-all,samples/GSE283283/GSM8659185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659186,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1484,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.991489196645646,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659186,,,test,sda-all,samples/GSE283283/GSM8659186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659187,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2592,32285,counts,um,1.0,verified,True,H&E,3.992359003194768,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659187,,,test,sda-all,samples/GSE283283/GSM8659187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659188,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2694,32285,counts,um,1.0,verified,True,H&E,3.984012573125066,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659188,,,test,sda-all,samples/GSE283283/GSM8659188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659189,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,684,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.023488019808868,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659189,,,test,sda-all,samples/GSE283283/GSM8659189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659190,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3032,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.054260593018216,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659190,,,test,sda-all,samples/GSE283283/GSM8659190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659191,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2981,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.030631376964513,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659191,,,test,sda-all,samples/GSE283283/GSM8659191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659192,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2972,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.062258384092843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659192,,,test,sda-all,samples/GSE283283/GSM8659192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659193,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2886,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.041006877554884,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659193,,,test,sda-all,samples/GSE283283/GSM8659193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659194,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2302,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.0524509419472885,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659194,,,test,sda-all,samples/GSE283283/GSM8659194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659195,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3365,32285,counts,um,1.0,verified,True,H&E,4.034059713959665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659195,,,test,sda-all,samples/GSE283283/GSM8659195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659196,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2765,32285,counts,um,1.0,verified,True,H&E,3.9434008171543127,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659196,,,test,sda-all,samples/GSE283283/GSM8659196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659197,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1067,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.9899200107607506,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659197,,,test,sda-all,samples/GSE283283/GSM8659197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659198,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3029,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.02291587134598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659198,,,test,sda-all,samples/GSE283283/GSM8659198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659199,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3075,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.061809670019915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659199,,,test,sda-all,samples/GSE283283/GSM8659199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659200,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2856,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.035970158569859,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659200,,,test,sda-all,samples/GSE283283/GSM8659200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8659201,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2552,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.050155101893555,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659201,,,test,sda-all,samples/GSE283283/GSM8659201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659202,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3888,32285,counts,um,1.0,verified,True,H&E,4.016959042115016,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659202,,,test,sda-all,samples/GSE283283/GSM8659202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659203,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2546,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.089685939021284,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659203,,,test,sda-all,samples/GSE283283/GSM8659203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659204,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2222,32285,counts,um,1.0,verified,True,H&E,3.933682473949982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659204,,,test,sda-all,samples/GSE283283/GSM8659204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659205,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,779,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.003483188627135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659205,,,test,sda-all,samples/GSE283283/GSM8659205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8659206,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2822,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.060246074934693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659206,,,test,sda-all,samples/GSE283283/GSM8659206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659207,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2860,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.037153584364845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659207,,,test,sda-all,samples/GSE283283/GSM8659207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659208,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2667,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.030070458297049,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659208,,,test,sda-all,samples/GSE283283/GSM8659208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659209,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2657,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.053260673788865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659209,,,test,sda-all,samples/GSE283283/GSM8659209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659210,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2206,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.041382802662724,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659210,,,test,sda-all,samples/GSE283283/GSM8659210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659211,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3615,32285,counts,um,1.0,verified,True,H&E,3.972410883913362,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659211,,,test,sda-all,samples/GSE283283/GSM8659211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659212,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2478,32285,counts,um,1.0,verified,True,H&E,4.064442111041482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659212,,,test,sda-all,samples/GSE283283/GSM8659212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659213,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2407,32285,counts,um,1.0,verified,True,H&E,3.9416956405426973,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659213,,,test,sda-all,samples/GSE283283/GSM8659213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659214,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,884,32285,counts,um,1.0,verified,True,H&E,4.0233232257919225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659214,,,test,sda-all,samples/GSE283283/GSM8659214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8659215,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2625,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.0929276804509405,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659215,,,test,sda-all,samples/GSE283283/GSM8659215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659216,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2854,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.047272234794894,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659216,,,test,sda-all,samples/GSE283283/GSM8659216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659217,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2758,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.011913435419856,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659217,,,test,sda-all,samples/GSE283283/GSM8659217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659218,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2817,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.06043297879224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659218,,,test,sda-all,samples/GSE283283/GSM8659218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659219,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2362,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.962142439085437,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659219,,,test,sda-all,samples/GSE283283/GSM8659219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659220,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3560,32285,counts,um,1.0,verified,True,H&E,4.027568544879345,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659220,,,test,sda-all,samples/GSE283283/GSM8659220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659221,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3754,32285,counts,um,1.0,verified,True,H&E,3.96047838125204,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659221,,,test,sda-all,samples/GSE283283/GSM8659221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659222,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,625,32285,counts,um,1.0,verified,True,H&E,4.030445819311681,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659222,,,test,sda-all,samples/GSE283283/GSM8659222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659223,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3094,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.04325342364886,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659223,,,test,sda-all,samples/GSE283283/GSM8659223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659224,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3001,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.048136137708625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659224,,,test,sda-all,samples/GSE283283/GSM8659224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659225,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2985,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.069257421806186,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659225,,,test,sda-all,samples/GSE283283/GSM8659225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659226,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2451,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.0351352926792154,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659226,,,test,sda-all,samples/GSE283283/GSM8659226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8659227,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1371,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.9920128467334357,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659227,,,test,sda-all,samples/GSE283283/GSM8659227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659228,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3406,32285,counts,um,1.0,verified,True,H&E,4.025798211134232,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659228,,,test,sda-all,samples/GSE283283/GSM8659228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659229,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3306,32285,counts,um,1.0,verified,True,H&E,3.9706314276995385,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659229,,,test,sda-all,samples/GSE283283/GSM8659229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659230,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3127,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.024445774953519,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659230,,,test,sda-all,samples/GSE283283/GSM8659230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8659231,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2926,32285,counts,um,1.0,verified,True,H&E,3.9909513294773635,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659231,,,test,sda-all,samples/GSE283283/GSM8659231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659232,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,806,32285,counts,um,1.0,verified,True,H&E,3.9965116703162837,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659232,,,test,sda-all,samples/GSE283283/GSM8659232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659233,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2679,32285,counts,um,1.0,verified,True,H&E,4.05236308565057,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659233,,,test,sda-all,samples/GSE283283/GSM8659233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659234,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3822,32285,counts,um,1.0,verified,True,H&E,3.9471191748061574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659234,,,test,sda-all,samples/GSE283283/GSM8659234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659235,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3170,32285,counts,um,1.0,verified,True,H&E,3.997431384529482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659235,,,test,sda-all,samples/GSE283283/GSM8659235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659236,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,567,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.007675062428843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659236,,,test,sda-all,samples/GSE283283/GSM8659236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659237,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3178,32285,counts,um,1.0,verified,True,H&E,4.0126444822144265,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659237,,,test,sda-all,samples/GSE283283/GSM8659237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659238,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2748,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),3.9485626827531446,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659238,,,test,sda-all,samples/GSE283283/GSM8659238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659239,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1676,32285,counts,um,1.0,verified,True,H&E,4.033425641891224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659239,,,test,sda-all,samples/GSE283283/GSM8659239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8659240,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1034,32285,counts,um,1.0,verified,True,H&E,4.049413978941004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659240,,,test,sda-all,samples/GSE283283/GSM8659240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659241,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3753,32285,counts,um,1.0,verified,True,H&E,4.015908668211418,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659241,,,test,sda-all,samples/GSE283283/GSM8659241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659242,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3776,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.031740484447056,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659242,,,test,sda-all,samples/GSE283283/GSM8659242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659243,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2120,32285,counts,um,1.0,verified,True,H&E,3.915708320394564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659243,,,test,sda-all,samples/GSE283283/GSM8659243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8659244,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,812,32285,counts,um,1.0,verified,True,H&E,4.054498688005127,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659244,,,test,sda-all,samples/GSE283283/GSM8659244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659245,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2676,32285,counts,um,1.0,verified,True,H&E,4.038665241797769,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659245,,,test,sda-all,samples/GSE283283/GSM8659245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659246,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2818,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.9970726439233135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659246,,,test,sda-all,samples/GSE283283/GSM8659246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659247,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2766,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.035694608096834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659247,,,test,sda-all,samples/GSE283283/GSM8659247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659248,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2579,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.991414121158241,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659248,,,test,sda-all,samples/GSE283283/GSM8659248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659249,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1660,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.985577814965058,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659249,,,test,sda-all,samples/GSE283283/GSM8659249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659250,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3152,32285,counts,um,1.0,verified,True,H&E,4.016901818321172,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659250,,,test,sda-all,samples/GSE283283/GSM8659250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659251,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3330,32285,counts,um,1.0,verified,True,H&E,3.96492900780111,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659251,,,test,sda-all,samples/GSE283283/GSM8659251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659252,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1712,32285,counts,um,1.0,verified,True,H&E,3.9815970399070992,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659252,,,test,sda-all,samples/GSE283283/GSM8659252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659253,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,375,32285,counts,um,1.0,verified,True,H&E,4.034136847191625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659253,,,test,sda-all,samples/GSE283283/GSM8659253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659254,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2896,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.021398961104235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659254,,,test,sda-all,samples/GSE283283/GSM8659254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659255,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2709,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.010674369029283,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659255,,,test,sda-all,samples/GSE283283/GSM8659255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659256,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2792,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.020727263061611,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659256,,,test,sda-all,samples/GSE283283/GSM8659256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659257,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2670,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.020518976278763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659257,,,test,sda-all,samples/GSE283283/GSM8659257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659258,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2131,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.000122088566401,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659258,,,test,sda-all,samples/GSE283283/GSM8659258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659259,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3337,32285,counts,um,1.0,verified,True,H&E,4.040989563921613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659259,,,test,sda-all,samples/GSE283283/GSM8659259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659260,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3502,32285,counts,um,1.0,verified,True,H&E,3.9651629801421935,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659260,,,test,sda-all,samples/GSE283283/GSM8659260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659261,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3407,32285,counts,um,1.0,verified,True,H&E,4.014785412842418,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659261,,,test,sda-all,samples/GSE283283/GSM8659261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8659262,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1185,32285,counts,um,1.0,verified,True,H&E,3.981572733662267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659262,,,test,sda-all,samples/GSE283283/GSM8659262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8659263,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,973,32285,counts,um,1.0,verified,True,H&E,4.0360940567935595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659263,,,test,sda-all,samples/GSE283283/GSM8659263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659264,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3018,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.02102724930815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659264,,,test,sda-all,samples/GSE283283/GSM8659264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8659265,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3012,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.9878983609029652,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659265,,,test,sda-all,samples/GSE283283/GSM8659265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659266,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2997,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.022621045548528,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659266,,,test,sda-all,samples/GSE283283/GSM8659266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659267,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2593,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.9894290431592148,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659267,,,test,sda-all,samples/GSE283283/GSM8659267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659268,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1640,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),3.969364028775509,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659268,,,test,sda-all,samples/GSE283283/GSM8659268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659269,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3179,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.027942530706114,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659269,,,test,sda-all,samples/GSE283283/GSM8659269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659270,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3489,32285,counts,um,1.0,verified,True,H&E,3.930112519263687,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659270,,,test,sda-all,samples/GSE283283/GSM8659270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659271,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2627,38514,counts,um,1.0,verified,True,H&E,4.050343246799887,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659271,,,test,sda-all,samples/GSE283283/GSM8659271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM8659272,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,823,38514,counts,um,1.0,verified,True,H&E,4.042265759613864,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659272,,,test,sda-all,samples/GSE283283/GSM8659272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659273,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3328,38514,counts,um,1.0,verified,True,H&E,4.052882285176205,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659273,,,test,sda-all,samples/GSE283283/GSM8659273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM8659274,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2615,38514,counts,um,1.0,verified,True,H&E,4.030481945260867,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659274,,,test,sda-all,samples/GSE283283/GSM8659274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8659275,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4222,38514,counts,um,1.0,verified,True,H&E,4.036079468373582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659275,,,test,sda-all,samples/GSE283283/GSM8659275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8659276,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H300,BNI-H300,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1018,38514,counts,um,1.0,verified,True,H&E,3.9869794000344783,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659276,,,test,sda-all,samples/GSE283283/GSM8659276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659277,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H300,BNI-H300,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3572,38514,counts,um,1.0,verified,True,H&E,4.049355046469575,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659277,,,test,sda-all,samples/GSE283283/GSM8659277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM8659278,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2865,38514,counts,um,1.0,verified,True,H&E,4.059875814057969,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659278,,,test,sda-all,samples/GSE283283/GSM8659278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8659279,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,538,38514,counts,um,1.0,verified,True,H&E,4.029740681857099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659279,,,test,sda-all,samples/GSE283283/GSM8659279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8659280,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3772,38514,counts,um,1.0,verified,True,H&E,4.009168471421128,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659280,,,test,sda-all,samples/GSE283283/GSM8659280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8659281,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3277,38514,counts,um,1.0,verified,True,H&E,4.036457228228818,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659281,,,test,sda-all,samples/GSE283283/GSM8659281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM8659282,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2865,38514,counts,um,1.0,verified,True,H&E,4.004132944110288,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659282,,,test,sda-all,samples/GSE283283/GSM8659282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8659283,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2359,38514,counts,um,1.0,verified,True,H&E,4.027342246568631,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659283,,,test,sda-all,samples/GSE283283/GSM8659283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659284,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,364,38514,counts,um,1.0,verified,True,H&E,4.054499113276928,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659284,,,test,sda-all,samples/GSE283283/GSM8659284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8659285,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3453,38514,counts,um,1.0,verified,True,H&E,4.034824294229594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659285,,,test,sda-all,samples/GSE283283/GSM8659285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659286,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,male,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3207,38514,counts,um,1.0,verified,True,H&E,4.015121709457296,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659286,,,test,sda-all,samples/GSE283283/GSM8659286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8659287,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2825,38514,counts,um,1.0,verified,True,H&E,4.021446306733305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659287,,,test,sda-all,samples/GSE283283/GSM8659287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659288,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,675,38514,counts,um,1.0,verified,True,H&E,4.015504592788235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659288,,,test,sda-all,samples/GSE283283/GSM8659288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 0.85}",,
GSM8659289,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4009,38514,counts,um,1.0,verified,True,H&E,3.9709504132558417,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659289,,,test,sda-all,samples/GSE283283/GSM8659289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659290,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3619,38514,counts,um,1.0,verified,True,H&E,4.035586643849085,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659290,,,test,sda-all,samples/GSE283283/GSM8659290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8659291,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3210,38514,counts,um,1.0,verified,True,H&E,4.015235458345807,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659291,,,test,sda-all,samples/GSE283283/GSM8659291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659292,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,450,38514,counts,um,1.0,verified,True,H&E,4.024027507549883,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659292,,,test,sda-all,samples/GSE283283/GSM8659292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM8659293,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3254,38514,counts,um,1.0,verified,True,H&E,4.016868904122183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659293,,,test,sda-all,samples/GSE283283/GSM8659293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659294,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3614,38514,counts,um,1.0,verified,True,H&E,4.010260847111578,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659294,,,test,sda-all,samples/GSE283283/GSM8659294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8659295,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3200,38514,counts,um,1.0,verified,True,H&E,3.9902444541286397,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659295,,,test,sda-all,samples/GSE283283/GSM8659295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8659296,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H308,BNI-H308,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3722,38514,counts,um,1.0,verified,True,H&E,4.017251306789092,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659296,,,test,sda-all,samples/GSE283283/GSM8659296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8659297,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H308,BNI-H308,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4295,38514,counts,um,1.0,verified,True,H&E,3.9787098581159563,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659297,,,test,sda-all,samples/GSE283283/GSM8659297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8659298,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H308,BNI-H308,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3730,38514,counts,um,1.0,verified,True,H&E,4.043616680812108,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659298,,,test,sda-all,samples/GSE283283/GSM8659298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8659299,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3197,38514,counts,um,1.0,verified,True,H&E,4.026619238742295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659299,,,test,sda-all,samples/GSE283283/GSM8659299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659300,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1142,38514,counts,um,1.0,verified,True,H&E,3.991560606043408,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659300,,,test,sda-all,samples/GSE283283/GSM8659300,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8659301,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3299,38514,counts,um,1.0,verified,True,H&E,4.027997594384482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659301,,,test,sda-all,samples/GSE283283/GSM8659301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8659302,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4070,38514,counts,um,1.0,verified,True,H&E,4.043063007383025,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659302,,,test,sda-all,samples/GSE283283/GSM8659302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659303,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3680,38514,counts,um,1.0,verified,True,H&E,3.9993676953393833,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659303,,,test,sda-all,samples/GSE283283/GSM8659303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8659304,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2202,38514,counts,um,1.0,verified,True,H&E,4.031549279864547,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659304,,,test,sda-all,samples/GSE283283/GSM8659304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659305,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2829,38514,counts,um,1.0,verified,True,H&E,4.049072042326761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659305,,,test,sda-all,samples/GSE283283/GSM8659305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM8659306,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4089,38514,counts,um,1.0,verified,True,H&E,4.030349918439763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659306,,,test,sda-all,samples/GSE283283/GSM8659306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8659307,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3058,38514,counts,um,1.0,verified,True,H&E,4.036597722864844,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659307,,,test,sda-all,samples/GSE283283/GSM8659307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM8659308,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3613,38514,counts,um,1.0,verified,True,H&E,4.056848865755035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659308,,,test,sda-all,samples/GSE283283/GSM8659308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8659309,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory bulb,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,871,38514,counts,um,1.0,verified,True,H&E,4.036632683389745,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659309,,,test,sda-all,samples/GSE283283/GSM8659309,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659310,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3391,38514,counts,um,1.0,verified,True,H&E,4.0347052986355605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659310,,,test,sda-all,samples/GSE283283/GSM8659310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM8659311,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4157,38514,counts,um,1.0,verified,True,H&E,4.070035861129638,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659311,,,test,sda-all,samples/GSE283283/GSM8659311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM8659312,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005625,cerebral malaria,disease,luna,Cerebral malaria,Plasmodium berghei ANKA infection,adult,age rule: age with unit,adult,2 months,female,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2919,38514,counts,um,1.0,verified,True,H&E,3.9916398914026043,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659312,,,test,sda-all,samples/GSE283283/GSM8659312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8659313,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,42298,24082,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659313,,,test,sda-all,samples/GSE283283/GSM8659313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659314,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,42518,24758,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659314,,,test,sda-all,samples/GSE283283/GSM8659314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659315,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,38115,25457,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659315,,,test,sda-all,samples/GSE283283/GSM8659315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659316,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,36161,25229,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659316,,,test,sda-all,samples/GSE283283/GSM8659316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659317,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,17 weeks,male,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,27216,25476,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659317,,,test,sda-all,samples/GSE283283/GSM8659317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659318,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,44249,24687,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659318,,,test,sda-all,samples/GSE283283/GSM8659318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659319,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,43579,24738,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659319,,,test,sda-all,samples/GSE283283/GSM8659319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659320,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,43861,26010,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659320,,,test,sda-all,samples/GSE283283/GSM8659320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659321,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,39532,38409,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659321,,,test,sda-all,samples/GSE283283/GSM8659321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659322,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,adult,age rule: age with unit,adult,73 weeks,male,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,30569,24806,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659322,,,test,sda-all,samples/GSE283283/GSM8659322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659323,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,42789,25276,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659323,,,test,sda-all,samples/GSE283283/GSM8659323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659324,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,42728,25160,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659324,,,test,sda-all,samples/GSE283283/GSM8659324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659325,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,42512,25725,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659325,,,test,sda-all,samples/GSE283283/GSM8659325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659326,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,35887,25560,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659326,,,test,sda-all,samples/GSE283283/GSM8659326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8659327,GSE283283,GSE283283,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wildtype,aged,age rule: age with unit,aged,112 weeks,male,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,StereoSeq,,,bin,31460,25180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8659327,,,test,sda-all,samples/GSE283283/GSM8659327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659692,GSE283302,GSE283302,Spatial Transcriptomic Profiling of the Mouse Adrenal Gland and Adjacent Adipose Tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,adrenal gland,luna,UBERON:0018303,adrenal tissue,adrenal gland with adjacent adipose tissue,primary tissue,,,normal,luna,,intact,adult,age rule: age with unit,adult,10 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,992,19465,counts,pixel,2.823022150545312,platform_constant,True,H&E,2.823022150545312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41442035,,GSM8659692,,,train,hesrt,samples/GSE283302/GSM8659692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8660262,GSE283333,GSE283333,Comprehensive immune profiling reveals IFN-γ signaling in T cells mediates parasite phagocytosis in a rodent malaria model : Spatial transcriptomics data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,noninfection,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU Spatial Transcriptomics,,,,16340,54838,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8660262,,,train,hesrt,samples/GSE283333/GSM8660262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8660263,GSE283333,GSE283333,Comprehensive immune profiling reveals IFN-γ signaling in T cells mediates parasite phagocytosis in a rodent malaria model : Spatial transcriptomics data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005136,malaria,disease,luna,,Pb NK65-E infection,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU Spatial Transcriptomics,,,,37716,54838,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8660263,,,train,hesrt,samples/GSE283333/GSM8660263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662111,GSE283411,GSE283411,Clonal lineage tracing and transcriptomics of cortical progenitor populations reveal maintenance of differentiation potential.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,forebrain,primary tissue,,,normal,luna,,wild-type,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Slide-seq,release v3,Curio Seeker,sequencing-based,Curio Seeker,,,bead,68890,24102,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,39952245,,GSM8662111,,,train,sda-all,samples/GSE283411/GSM8662111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662112,GSE283411,GSE283411,Clonal lineage tracing and transcriptomics of cortical progenitor populations reveal maintenance of differentiation potential.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,forebrain,primary tissue,,,normal,luna,,wild-type,juvenile,luna,juvenile,,unknown,not stated,,,,,,Slide-seq,release v3,Curio Seeker,sequencing-based,Curio Seeker,,,bead,65031,23626,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,39952245,,GSM8662112,,,train,sda-all,samples/GSE283411/GSM8662112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8662113,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4238,17943,counts,pixel,0.8333043996551018,platform_constant,True,H&E,0.8333043996551018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662113,,,train,hesrt,samples/GSE283412/GSM8662113,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662114,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4254,17943,counts,pixel,0.8333333333333334,platform_constant,True,H&E,0.8333333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662114,,,train,hesrt,samples/GSE283412/GSM8662114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662115,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4548,17943,counts,pixel,0.826898230594723,platform_constant,True,H&E,0.826898230594723,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662115,,,train,hesrt,samples/GSE283412/GSM8662115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8662116,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4537,17943,counts,pixel,0.8333333333333334,platform_constant,True,H&E,0.8333333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662116,,,train,hesrt,samples/GSE283412/GSM8662116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662117,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4638,17943,counts,pixel,0.8130081300813008,platform_constant,True,H&E,0.8130081300813008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662117,,,train,hesrt,samples/GSE283412/GSM8662117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662118,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4258,17943,counts,pixel,0.8293972762090773,platform_constant,True,H&E,0.8293972762090773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662118,,,train,hesrt,samples/GSE283412/GSM8662118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8662119,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4258,17943,counts,pixel,0.8333333333333334,platform_constant,True,H&E,0.8333333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662119,,,train,hesrt,samples/GSE283412/GSM8662119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662120,GSE283412,GSE283412,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,MpBC,tumour tissue,MONDO:0007254,breast cancer,disease,luna,metaplastic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4240,17943,counts,pixel,0.819672131147541,platform_constant,True,H&E,0.819672131147541,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662120,,,train,hesrt,samples/GSE283412/GSM8662120,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662286,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,8034,99,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662286,,,train,sda-all,samples/GSE283418/GSM8662286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662287,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,7430,98,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662287,,,train,sda-all,samples/GSE283418/GSM8662287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662288,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,5899,98,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662288,,,train,sda-all,samples/GSE283418/GSM8662288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662289,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,6574,98,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662289,,,train,sda-all,samples/GSE283418/GSM8662289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662290,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,6800,100,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662290,,,train,sda-all,samples/GSE283418/GSM8662290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662291,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,7083,99,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662291,,,train,sda-all,samples/GSE283418/GSM8662291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662292,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,9706,99,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662292,,,train,sda-all,samples/GSE283418/GSM8662292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662293,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,6967,100,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662293,,,train,sda-all,samples/GSE283418/GSM8662293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662294,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,8040,100,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662294,,,train,sda-all,samples/GSE283418/GSM8662294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662295,GSE283418,GSE283418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001876,amygdala,amygdala brain tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,7418,99,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662295,,,train,sda-all,samples/GSE283418/GSM8662295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662446,GSE283435,GSE283435,Gain-of-function ENL YEATS domain mutations impede nephrogenesis through gene expression control,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Six2-TGCtg/+;Enl+/+ and Six2-TGCtg/+;EnlT1/+,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visiumHD,,,bin,302036,19059,counts,um,1.0,verified,True,H&E,1.3381432859179192,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40087269,,GSM8662446,,,train,sda-all,samples/GSE283435/GSM8662446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM8662447,GSE283435,GSE283435,Gain-of-function ENL YEATS domain mutations impede nephrogenesis through gene expression control,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Foxd1GC/+;Enl+/+ and Foxd1GC/+;EnlT1/+,embryonic,luna,embryonic,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visiumHD,,,bin,232640,19059,counts,um,1.0,verified,True,H&E,1.333983123513762,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40087269,,GSM8662447,,,train,sda-all,samples/GSE283435/GSM8662447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8664001,GSE283497,GSE283497,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Whole brain organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,44302,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998559196443265,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664001,,,train,sda-all,samples/GSE283497/GSM8664001,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8664002,GSE283497,GSE283497,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Whole brain section,organoid,MONDO:0016680,high grade astrocytic tumor,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,69800,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000006467970609,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664002,,,train,sda-all,samples/GSE283497/GSM8664002,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.39, ""disease_status"": 0.35000000000000003, ""uberon"": 0.84, ""life_stage"": 0.99}",sample_kind;disease_status,low_confidence_annotation
GSM8664003,GSE283497,GSE283497,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,uberon_chain,UBERON:0000955,brain,Whole brain organoid,organoid,MONDO:0018177,glioblastoma,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,29567,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999230137548756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664003,,,train,sda-all,samples/GSE283497/GSM8664003,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.56, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM8664004,GSE283497,GSE283497,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Whole brain section,primary tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,69218,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664004,,,train,sda-all,samples/GSE283497/GSM8664004,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.75, ""disease_status"": 0.55, ""uberon"": 0.65, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8664005,GSE283497,GSE283497,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Whole brain organoid,organoid,MONDO:0018177,glioblastoma,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,13735,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000443141532589,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664005,,,train,sda-all,samples/GSE283497/GSM8664005,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.58, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8664006,GSE283497,GSE283497,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Whole brain section,organoid,MONDO:0018177,glioblastoma,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,39391,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000064486174165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664006,,,train,sda-all,samples/GSE283497/GSM8664006,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.65, ""disease_status"": 0.41000000000000003, ""uberon"": 0.73, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8672828,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-SHH tissue,tumour tissue,MONDO:1060249,"atypical teratoid rhabdoid tumor, SHH-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13178,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672828,,,train,sda-all,samples/GSE283832/GSM8672828,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8672829,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-TYR tissue,tumour tissue,MONDO:1060251,"atypical teratoid rhabdoid tumor, TYR-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,126189,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672829,,,train,sda-all,samples/GSE283832/GSM8672829,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8672830,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-SHH tissue,tumour tissue,MONDO:1060249,"atypical teratoid rhabdoid tumor, SHH-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,153559,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672830,,,train,sda-all,samples/GSE283832/GSM8672830,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8672831,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-MYC tissue,tumour tissue,MONDO:1060250,"atypical teratoid rhabdoid tumor, MYC-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,168003,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672831,,,train,sda-all,samples/GSE283832/GSM8672831,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8672832,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-MYC tissue,tumour tissue,MONDO:1060250,"atypical teratoid rhabdoid tumor, MYC-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,344229,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672832,,,train,sda-all,samples/GSE283832/GSM8672832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8672833,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-SHH tissue,tumour tissue,MONDO:1060249,"atypical teratoid rhabdoid tumor, SHH-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,454004,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672833,,,train,sda-all,samples/GSE283832/GSM8672833,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8672834,GSE283832,GSE283832,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,FFPE ATRT-TYR tissue,tumour tissue,MONDO:1060251,"atypical teratoid rhabdoid tumor, TYR-activated",disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,101399,475,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672834,,,train,sda-all,samples/GSE283832/GSM8672834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8673457,GSE283863,GSE283863,Cranial radiotherapy profoundly affects glia without inducing widespread cellular senescence,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,85556,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40518745,,GSM8673457,,,train,sda-all,samples/GSE283863/GSM8673457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8673673,GSE283872,GSE283872,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0004921,subdivision of digestive tract,duodenum tissue and colon tissue,primary tissue,,,perturbation,luna,,"CD or HfiD feed 5w, HFD feed 0w",not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,7009,19714,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,41520334,,GSM8673673,,,test,sda-all,samples/GSE283872/GSM8673673,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.58, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8673674,GSE283872,GSE283872,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0004921,subdivision of digestive tract,duodenum tissue and colon tissue,primary tissue,,,perturbation,luna,,"CD or HfiD feed 5w, HFD feed 4w",not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,11454,22679,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,41520334,,GSM8673674,,,test,sda-all,samples/GSE283872/GSM8673674,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.64, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8673675,GSE283872,GSE283872,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0004921,subdivision of digestive tract,duodenum tissue and colon tissue,primary tissue,,,perturbation,luna,,"CD or HfiD feed 5w, HFD feed 8w",not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,7013,20514,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,41520334,,GSM8673675,,,test,sda-all,samples/GSE283872/GSM8673675,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.53, ""life_stage"": 0.59}",disease_status;uberon;life_stage,low_confidence_annotation
GSM9093371,GSE283872,GSE283872,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0004921,subdivision of digestive tract,duodenum tissue and colon tissue,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,7045,23902,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,41520334,,GSM9093371,,,test,sda-all,samples/GSE283872/GSM9093371,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.42, ""life_stage"": 0.42}",uberon;life_stage,low_confidence_annotation
GSM8673819,GSE283883,GSE283883,Spatial Transcriptomics Sequencing of Mouse Liver at 2µm Resolution Using a Novel Spatial DNA Chip,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,adult,luna,adult,Adult,male,extracted field,Male,,,fresh frozen,Fresh frozen,Other,release v3,"other (named in GEO, not in list)",sequencing-based,other,,,bin,25000000,18617,counts,native_grid,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM8673819,,,train,sda-all,samples/GSE283883/GSM8673819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8674625,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3807,36945,counts,pixel,4.180973644906514,platform_constant,True,H&E,4.180973644906514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674625,,,test,hesrt,samples/GSE283945/GSM8674625,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8674626,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,intestine,primary tissue,,,normal,luna,NON_CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4609,36945,counts,pixel,4.542581539458849,platform_constant,True,H&E,4.542581539458849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674626,,,test,hesrt,samples/GSE283945/GSM8674626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.68, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8674627,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4922,36945,counts,pixel,4.504416950558462,platform_constant,True,H&E,4.504416950558462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674627,,,test,hesrt,samples/GSE283945/GSM8674627,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674628,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,intestine,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,DIVERTICULAR,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4274,36945,counts,pixel,4.184513218012733,platform_constant,True,H&E,4.184513218012733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674628,,,test,hesrt,samples/GSE283945/GSM8674628,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8674629,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4317,36945,counts,pixel,4.33274332068294,platform_constant,True,H&E,4.33274332068294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674629,,,test,hesrt,samples/GSE283945/GSM8674629,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674630,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2241,36945,counts,pixel,4.33274332068294,platform_constant,True,H&E,4.33274332068294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674630,,,test,hesrt,samples/GSE283945/GSM8674630,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674631,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005020,intestinal disorder,disease,mondo_predicate,NON_CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4129,36945,counts,pixel,4.502876195509259,platform_constant,True,H&E,4.502876195509259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674631,,,test,hesrt,samples/GSE283945/GSM8674631,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8674632,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,intestine,primary tissue,MONDO:0001674,diverticulitis of colon,disease,luna,DIVERTICULAR,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2526,36945,counts,pixel,4.502654878783435,platform_constant,True,H&E,4.502654878783435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674632,,,test,hesrt,samples/GSE283945/GSM8674632,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674633,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4987,36945,counts,pixel,4.091303775696442,platform_constant,True,H&E,4.091303775696442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674633,,,test,hesrt,samples/GSE283945/GSM8674633,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM8674634,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,intestine,primary tissue,MONDO:0005020,intestinal disorder,disease,luna,DIVERTICULAR,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4053,36945,counts,pixel,4.1626467922476005,platform_constant,True,H&E,4.1626467922476005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674634,,,test,hesrt,samples/GSE283945/GSM8674634,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8674635,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005020,intestinal disorder,disease,luna,DIVERTICULAR,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2349,36945,counts,pixel,4.5008848989510595,platform_constant,True,H&E,4.5008848989510595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674635,,,test,hesrt,samples/GSE283945/GSM8674635,sda-tissue-disease-2.3,"{""organ"": 0.37, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674636,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,healthy,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1906,36945,counts,pixel,4.503539817874815,platform_constant,True,H&E,4.503539817874815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674636,,,test,hesrt,samples/GSE283945/GSM8674636,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8674637,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,NON_CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2446,36945,counts,pixel,4.181817592994338,platform_constant,True,H&E,4.181817592994338,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674637,,,test,hesrt,samples/GSE283945/GSM8674637,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.81, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM8674638,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3523,36945,counts,pixel,4.501106270646435,platform_constant,True,H&E,4.501106270646435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674638,,,test,hesrt,samples/GSE283945/GSM8674638,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8674639,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3580,36945,counts,pixel,4.481894755399299,platform_constant,True,H&E,4.481894755399299,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674639,,,test,hesrt,samples/GSE283945/GSM8674639,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8674640,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4215,36945,counts,pixel,4.463210336916926,platform_constant,True,H&E,4.463210336916926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674640,,,test,hesrt,samples/GSE283945/GSM8674640,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674641,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3024,36945,counts,pixel,4.1816370562619145,platform_constant,True,H&E,4.1816370562619145,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674641,,,test,hesrt,samples/GSE283945/GSM8674641,sda-tissue-disease-2.3,"{""organ"": 0.26, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674642,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2892,36945,counts,pixel,4.181637056261894,platform_constant,True,H&E,4.181637056261894,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674642,,,test,hesrt,samples/GSE283945/GSM8674642,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674643,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3695,36945,counts,pixel,4.5006640068144605,platform_constant,True,H&E,4.5006640068144605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674643,,,test,hesrt,samples/GSE283945/GSM8674643,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674644,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4824,36945,counts,pixel,4.46232823194684,platform_constant,True,H&E,4.46232823194684,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674644,,,test,hesrt,samples/GSE283945/GSM8674644,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674645,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2815,36945,counts,pixel,4.502424677183384,platform_constant,True,H&E,4.502424677183384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674645,,,test,hesrt,samples/GSE283945/GSM8674645,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674646,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3818,36945,counts,pixel,4.185693124333748,platform_constant,True,H&E,4.185693124333748,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674646,,,test,hesrt,samples/GSE283945/GSM8674646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674647,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4208,36945,counts,pixel,4.482379004224967,platform_constant,True,H&E,4.482379004224967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674647,,,test,hesrt,samples/GSE283945/GSM8674647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674648,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3889,36945,counts,pixel,4.146770520839288,platform_constant,True,H&E,4.146770520839288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674648,,,test,hesrt,samples/GSE283945/GSM8674648,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674649,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2947,36945,counts,pixel,4.502433583812056,platform_constant,True,H&E,4.502433583812056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674649,,,test,hesrt,samples/GSE283945/GSM8674649,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8674650,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,healthy,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1626,36945,counts,pixel,4.328149240356721,platform_constant,True,H&E,4.328149240356721,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674650,,,test,hesrt,samples/GSE283945/GSM8674650,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8674651,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1725,36945,counts,pixel,4.208242307465107,platform_constant,True,H&E,4.208242307465107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674651,,,test,hesrt,samples/GSE283945/GSM8674651,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8674652,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1742,36945,counts,pixel,4.190101254370074,platform_constant,True,H&E,4.190101254370074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674652,,,test,hesrt,samples/GSE283945/GSM8674652,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8674653,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4544,36945,counts,pixel,4.460340211414209,platform_constant,True,H&E,4.460340211414209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674653,,,test,hesrt,samples/GSE283945/GSM8674653,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8674654,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4597,36945,counts,pixel,4.4993822454587855,platform_constant,True,H&E,4.4993822454587855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674654,,,test,hesrt,samples/GSE283945/GSM8674654,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674655,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,healthy,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2737,36945,counts,pixel,4.501327435158773,platform_constant,True,H&E,4.501327435158773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674655,,,test,hesrt,samples/GSE283945/GSM8674655,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8674656,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1335,36945,counts,pixel,4.184349571110809,platform_constant,True,H&E,4.184349571110809,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674656,,,test,hesrt,samples/GSE283945/GSM8674656,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8674657,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3812,36945,counts,pixel,4.181194495233687,platform_constant,True,H&E,4.181194495233687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674657,,,test,hesrt,samples/GSE283945/GSM8674657,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674658,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,healthy,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4619,36945,counts,pixel,4.479912358574608,platform_constant,True,H&E,4.479912358574608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674658,,,test,hesrt,samples/GSE283945/GSM8674658,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8674660,GSE283945,GSE283945,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,CD,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3928,36945,counts,pixel,4.4814543143128995,platform_constant,True,H&E,4.4814543143128995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674660,,,test,hesrt,samples/GSE283945/GSM8674660,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8674927,GSE283959,GSE283959,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3894,31253,counts,pixel,4.248884419718703,platform_constant,True,H&E,4.248884419718703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674927,,,train,hesrt,samples/GSE283959/GSM8674927,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8674928,GSE283959,GSE283959,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,xenograft,MONDO:0018177,glioblastoma,disease,luna,glioblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2116,31253,counts,pixel,3.9445902670833455,platform_constant,True,H&E,3.9445902670833455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674928,,,train,hesrt,samples/GSE283959/GSM8674928,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8674929,GSE283959,GSE283959,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021042,glioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2263,31253,counts,pixel,3.944590267083312,platform_constant,True,H&E,3.944590267083312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674929,,,train,hesrt,samples/GSE283959/GSM8674929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.34, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8674930,GSE283959,GSE283959,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0021042,glioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2255,31253,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674930,,,train,hesrt,samples/GSE283959/GSM8674930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.35000000000000003, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8675019,GSE283967,GSE283967,Multi-modal refinement of the human heart atlas during the first gestational trimester,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,8.4 post-conception weeks,male,extracted field,male,GSE283967:HEF_DN_F0000476,HEF_DN_F0000476,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2161,36601,counts,pixel,0.4310304787039547,platform_constant,True,H&E,0.5000046197883382,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39927812,10.1242/dev.204555,GSM8675019,,,train,hesrt,samples/GSE283967/GSM8675019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM8675020,GSE283967,GSE283967,Multi-modal refinement of the human heart atlas during the first gestational trimester,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,,embryonic,age rule: post-conception / gestational weeks,embryonic,8.4 post-conception weeks,male,extracted field,male,GSE283967:HEF_DN_F0000476,HEF_DN_F0000476,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1900,36601,counts,pixel,0.4310304787039547,platform_constant,True,H&E,0.49999349770685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39927812,10.1242/dev.204555,GSM8675020,,,train,hesrt,samples/GSE283967/GSM8675020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM8675021,GSE283967,GSE283967,Multi-modal refinement of the human heart atlas during the first gestational trimester,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,9.7 post-conception weeks,female,extracted field,female,GSE283967:HEF_DN_F0000298,HEF_DN_F0000298,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2318,36601,counts,pixel,3.9031305926310043,platform_constant,True,H&E,3.9031305926310043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39927812,10.1242/dev.204555,GSM8675021,,,train,hesrt,samples/GSE283967/GSM8675021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM8675811,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,54,male,extracted field,Male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,26082,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675811,,,train,sda-all,samples/GSE284005/GSM8675811,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675812,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,53,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,31404,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675812,,,train,sda-all,samples/GSE284005/GSM8675812,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675813,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,47,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,31244,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675813,,,train,sda-all,samples/GSE284005/GSM8675813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675814,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,61,male,extracted field,Male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,20149,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675814,,,train,sda-all,samples/GSE284005/GSM8675814,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675815,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,48,male,extracted field,Male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,25153,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675815,,,train,sda-all,samples/GSE284005/GSM8675815,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675816,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,56,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10768,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675816,,,train,sda-all,samples/GSE284005/GSM8675816,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675817,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,,,normal,luna,multiple sclerosis,,aged,age rule: bare number read as years,aged,76,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,22299,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675817,,,train,sda-all,samples/GSE284005/GSM8675817,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8675818,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,52,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12134,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675818,,,train,sda-all,samples/GSE284005/GSM8675818,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8675819,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,aged,age rule: bare number read as years,aged,77,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,25892,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675819,,,train,sda-all,samples/GSE284005/GSM8675819,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675820,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,45,male,extracted field,Male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,35559,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675820,,,train,sda-all,samples/GSE284005/GSM8675820,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675821,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,aged,age rule: bare number read as years,aged,66,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,34952,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675821,,,train,sda-all,samples/GSE284005/GSM8675821,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675822,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,54,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10814,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675822,,,train,sda-all,samples/GSE284005/GSM8675822,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675823,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,,,normal,luna,multiple sclerosis,,aged,age rule: bare number read as years,aged,77,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5550,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675823,,,train,sda-all,samples/GSE284005/GSM8675823,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8675824,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,60,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,22006,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675824,,,train,sda-all,samples/GSE284005/GSM8675824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675825,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,57,male,extracted field,Male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,24415,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675825,,,train,sda-all,samples/GSE284005/GSM8675825,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675826,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,multiple sclerosis,,adult,age rule: bare number read as years,adult,39,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,19373,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675826,,,train,sda-all,samples/GSE284005/GSM8675826,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675827,GSE284005,GSE284005,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0002316,white matter,"White Matter, fresh frozen",primary tissue,,,normal,luna,multiple sclerosis,,aged,age rule: bare number read as years,aged,75,female,extracted field,Female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,44000,500,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8675827,,,train,sda-all,samples/GSE284005/GSM8675827,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8676453,GSE284032,GSE284032,Integration and annotation of spatial multi-omic data with DIRAC highlights spatial organization of lymphoid organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,20613,26647,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8676453,,,test,sda-all,samples/GSE284032/GSM8676453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8740089,GSE284032,GSE284032,Integration and annotation of spatial multi-omic data with DIRAC highlights spatial organization of lymphoid organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,16478,26068,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8740089,,,test,sda-all,samples/GSE284032/GSM8740089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8676719,GSE284052,GSE284052,A spatiotemporal atlas of giant-cell formation during Meloidogyne incognita infection in tomato roots,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,Root,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Meloidogyne incognita-inoculated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,1835,35887,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42581385,,GSM8676719,,,train,sda-all,samples/GSE284052/GSM8676719,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM8676720,GSE284052,GSE284052,A spatiotemporal atlas of giant-cell formation during Meloidogyne incognita infection in tomato roots,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,Root,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Meloidogyne incognita-inoculated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,3883,35887,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42581385,,GSM8676720,,,train,sda-all,samples/GSE284052/GSM8676720,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM8676721,GSE284052,GSE284052,A spatiotemporal atlas of giant-cell formation during Meloidogyne incognita infection in tomato roots,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,Root,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Meloidogyne incognita-inoculated,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,8067,35887,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42581385,,GSM8676721,,,train,sda-all,samples/GSE284052/GSM8676721,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.84}",,
GSM8677818,GSE284089,GSE284089,Spatial multi-modal atlas of bone tissue from human femur,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0006767,head of femur,Human femoral head,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,6.101255468834063,platform_constant,True,H&E,6.101255468834063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817519,,GSM8677818,,,train,hesrt,samples/GSE284089/GSM8677818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8678305,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,263,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678305,,,train,sda-all,samples/GSE284137/GSM8678305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.52, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678306,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,244,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678306,,,train,sda-all,samples/GSE284137/GSM8678306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.39, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM8678307,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,180,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678307,,,train,sda-all,samples/GSE284137/GSM8678307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8678308,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,167,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678308,,,train,sda-all,samples/GSE284137/GSM8678308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8678309,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,221,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678309,,,train,sda-all,samples/GSE284137/GSM8678309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.66, ""life_stage"": 0.99}",,
GSM8678310,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,148,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678310,,,train,sda-all,samples/GSE284137/GSM8678310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8678311,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,277,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678311,,,train,sda-all,samples/GSE284137/GSM8678311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.68, ""life_stage"": 0.9500000000000001}",,
GSM8678312,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,333,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678312,,,train,sda-all,samples/GSE284137/GSM8678312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.47000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678313,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,132,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678313,,,train,sda-all,samples/GSE284137/GSM8678313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM8678314,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,189,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678314,,,train,sda-all,samples/GSE284137/GSM8678314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.99}",,
GSM8678315,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,216,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678315,,,train,sda-all,samples/GSE284137/GSM8678315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8200000000000001, ""life_stage"": 0.99}",,
GSM8678316,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,245,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678316,,,train,sda-all,samples/GSE284137/GSM8678316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.81, ""life_stage"": 0.99}",,
GSM8678317,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,2w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,133,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678317,,,train,sda-all,samples/GSE284137/GSM8678317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.55, ""life_stage"": 0.28}",uberon;life_stage,low_confidence_annotation
GSM8678318,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,2w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,127,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678318,,,train,sda-all,samples/GSE284137/GSM8678318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.44, ""life_stage"": 0.22}",uberon;life_stage,low_confidence_annotation
GSM8678319,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,2w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,88,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678319,,,train,sda-all,samples/GSE284137/GSM8678319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.81, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678320,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,2w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,84,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678320,,,train,sda-all,samples/GSE284137/GSM8678320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.85, ""life_stage"": 0.63}",,
GSM8678321,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,2w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,246,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678321,,,train,sda-all,samples/GSE284137/GSM8678321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.8, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8678322,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,2w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,259,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678322,,,train,sda-all,samples/GSE284137/GSM8678322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.71, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8678323,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,193,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678323,,,train,sda-all,samples/GSE284137/GSM8678323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.96, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM8678324,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,188,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678324,,,train,sda-all,samples/GSE284137/GSM8678324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.84, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8678325,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,104,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678325,,,train,sda-all,samples/GSE284137/GSM8678325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.9400000000000001, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8678326,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,173,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678326,,,train,sda-all,samples/GSE284137/GSM8678326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.79, ""life_stage"": 0.25}",life_stage,low_confidence_annotation
GSM8678327,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,176,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678327,,,train,sda-all,samples/GSE284137/GSM8678327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.68, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM8678328,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,2w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,173,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678328,,,train,sda-all,samples/GSE284137/GSM8678328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.56, ""life_stage"": 0.35000000000000003}",uberon;life_stage,low_confidence_annotation
GSM8678329,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,33,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678329,,,train,sda-all,samples/GSE284137/GSM8678329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.59, ""life_stage"": 0.84}",uberon,low_confidence_annotation
GSM8678330,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,28,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678330,,,train,sda-all,samples/GSE284137/GSM8678330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.5, ""life_stage"": 0.78}",uberon,low_confidence_annotation
GSM8678331,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,70,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678331,,,train,sda-all,samples/GSE284137/GSM8678331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 0.91}",,
GSM8678332,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,43,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678332,,,train,sda-all,samples/GSE284137/GSM8678332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.79, ""life_stage"": 0.91}",,
GSM8678333,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,72,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678333,,,train,sda-all,samples/GSE284137/GSM8678333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.87, ""life_stage"": 0.9400000000000001}",,
GSM8678334,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,31,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678334,,,train,sda-all,samples/GSE284137/GSM8678334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.43, ""life_stage"": 0.62}",uberon,low_confidence_annotation
GSM8678335,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,66,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678335,,,train,sda-all,samples/GSE284137/GSM8678335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.47000000000000003, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678336,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,66,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678336,,,train,sda-all,samples/GSE284137/GSM8678336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.77, ""life_stage"": 0.86}",,
GSM8678337,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,44,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678337,,,train,sda-all,samples/GSE284137/GSM8678337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.72, ""life_stage"": 0.79}",,
GSM8678338,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,46,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678338,,,train,sda-all,samples/GSE284137/GSM8678338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.68, ""life_stage"": 0.8200000000000001}",,
GSM8678339,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,38,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678339,,,train,sda-all,samples/GSE284137/GSM8678339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.68, ""life_stage"": 0.91}",,
GSM8678340,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,157,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678340,,,train,sda-all,samples/GSE284137/GSM8678340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.45, ""life_stage"": 0.52}",uberon;life_stage,low_confidence_annotation
GSM8678341,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,212,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678341,,,train,sda-all,samples/GSE284137/GSM8678341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.8200000000000001, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM8678342,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,131,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678342,,,train,sda-all,samples/GSE284137/GSM8678342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.88, ""life_stage"": 0.66}",,
GSM8678343,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,133,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678343,,,train,sda-all,samples/GSE284137/GSM8678343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.89, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678344,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,75,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678344,,,train,sda-all,samples/GSE284137/GSM8678344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.87, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678345,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,109,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678345,,,train,sda-all,samples/GSE284137/GSM8678345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.76, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM8678346,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,91,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678346,,,train,sda-all,samples/GSE284137/GSM8678346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.56, ""life_stage"": 0.64}",uberon,low_confidence_annotation
GSM8678347,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,103,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678347,,,train,sda-all,samples/GSE284137/GSM8678347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.6900000000000001, ""life_stage"": 0.25}",life_stage,low_confidence_annotation
GSM8678348,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,147,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678348,,,train,sda-all,samples/GSE284137/GSM8678348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.85, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM8678349,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,146,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678349,,,train,sda-all,samples/GSE284137/GSM8678349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM8678350,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,91,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678350,,,train,sda-all,samples/GSE284137/GSM8678350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.76, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8678351,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,101,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678351,,,train,sda-all,samples/GSE284137/GSM8678351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.6000000000000001, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678352,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,2w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,127,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678352,,,train,sda-all,samples/GSE284137/GSM8678352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.52, ""life_stage"": 0.22}",uberon;life_stage,low_confidence_annotation
GSM8678353,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,72,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678353,,,train,sda-all,samples/GSE284137/GSM8678353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.89, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM8678354,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,98,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678354,,,train,sda-all,samples/GSE284137/GSM8678354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.92, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM8678355,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,2w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,102,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678355,,,train,sda-all,samples/GSE284137/GSM8678355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.81, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM8678356,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,90,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678356,,,train,sda-all,samples/GSE284137/GSM8678356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.81, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM8678357,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,2w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,137,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678357,,,train,sda-all,samples/GSE284137/GSM8678357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.77, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM8678358,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,130,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678358,,,train,sda-all,samples/GSE284137/GSM8678358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.46, ""life_stage"": 0.45}",uberon;life_stage,low_confidence_annotation
GSM8678359,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,102,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678359,,,train,sda-all,samples/GSE284137/GSM8678359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678360,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,2w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,143,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678360,,,train,sda-all,samples/GSE284137/GSM8678360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.91, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678361,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,168,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678361,,,train,sda-all,samples/GSE284137/GSM8678361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 0.65, ""life_stage"": 0.25}",disease_status;life_stage,low_confidence_annotation
GSM8678362,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,2w,female,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,122,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678362,,,train,sda-all,samples/GSE284137/GSM8678362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.71, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM8678363,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,63,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678363,,,train,sda-all,samples/GSE284137/GSM8678363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.52, ""life_stage"": 0.48}",uberon;life_stage,low_confidence_annotation
GSM8678364,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,89,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678364,,,train,sda-all,samples/GSE284137/GSM8678364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.59, ""life_stage"": 0.31}",uberon;life_stage,low_confidence_annotation
GSM8678365,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,133,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678365,,,train,sda-all,samples/GSE284137/GSM8678365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.91, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8678366,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,127,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678366,,,train,sda-all,samples/GSE284137/GSM8678366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.88, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8678367,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,171,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678367,,,train,sda-all,samples/GSE284137/GSM8678367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.75, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8678368,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,114,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678368,,,train,sda-all,samples/GSE284137/GSM8678368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 0.6900000000000001}",uberon,low_confidence_annotation
GSM8678369,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,125,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678369,,,train,sda-all,samples/GSE284137/GSM8678369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.64, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678370,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,42,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678370,,,train,sda-all,samples/GSE284137/GSM8678370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.84, ""life_stage"": 0.9500000000000001}",,
GSM8678371,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,58,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678371,,,train,sda-all,samples/GSE284137/GSM8678371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.81, ""life_stage"": 0.92}",,
GSM8678372,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,56,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678372,,,train,sda-all,samples/GSE284137/GSM8678372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.73, ""life_stage"": 0.9500000000000001}",,
GSM8678373,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: days in an age series,not stated,0d,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,39,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678373,,,train,sda-all,samples/GSE284137/GSM8678373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.66, ""life_stage"": 0.89}",,
GSM8678374,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,506,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678374,,,train,sda-all,samples/GSE284137/GSM8678374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.43, ""life_stage"": 0.52}",uberon;life_stage,low_confidence_annotation
GSM8678375,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,489,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678375,,,train,sda-all,samples/GSE284137/GSM8678375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.45, ""life_stage"": 0.58}",uberon;life_stage,low_confidence_annotation
GSM8678376,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,208,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678376,,,train,sda-all,samples/GSE284137/GSM8678376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.77}",,
GSM8678377,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,204,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678377,,,train,sda-all,samples/GSE284137/GSM8678377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.7000000000000001}",,
GSM8678378,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,3w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,189,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678378,,,train,sda-all,samples/GSE284137/GSM8678378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8678379,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,164,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678379,,,train,sda-all,samples/GSE284137/GSM8678379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.62, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678380,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,548,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678380,,,train,sda-all,samples/GSE284137/GSM8678380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.54, ""life_stage"": 0.72}",uberon,low_confidence_annotation
GSM8678381,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,506,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678381,,,train,sda-all,samples/GSE284137/GSM8678381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.52, ""life_stage"": 0.53}",uberon;life_stage,low_confidence_annotation
GSM8678382,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,211,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678382,,,train,sda-all,samples/GSE284137/GSM8678382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.87, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678383,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,214,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678383,,,train,sda-all,samples/GSE284137/GSM8678383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.89, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678384,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,3w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,169,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678384,,,train,sda-all,samples/GSE284137/GSM8678384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.66, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8678385,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,3w,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,199,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678385,,,train,sda-all,samples/GSE284137/GSM8678385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.74, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678386,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,496,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678386,,,train,sda-all,samples/GSE284137/GSM8678386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.61, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8678387,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,510,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678387,,,train,sda-all,samples/GSE284137/GSM8678387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.64, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM8678388,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,275,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678388,,,train,sda-all,samples/GSE284137/GSM8678388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 0.79}",,
GSM8678389,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,250,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678389,,,train,sda-all,samples/GSE284137/GSM8678389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.9500000000000001, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8678390,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,158,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678390,,,train,sda-all,samples/GSE284137/GSM8678390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.81, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8678391,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,3w,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,156,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678391,,,train,sda-all,samples/GSE284137/GSM8678391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.8, ""life_stage"": 0.64}",,
GSM8678392,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,359,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678392,,,train,sda-all,samples/GSE284137/GSM8678392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.66, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8678393,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,345,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678393,,,train,sda-all,samples/GSE284137/GSM8678393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.43, ""life_stage"": 0.44}",uberon;life_stage,low_confidence_annotation
GSM8678394,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,269,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678394,,,train,sda-all,samples/GSE284137/GSM8678394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.8}",,
GSM8678395,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,234,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678395,,,train,sda-all,samples/GSE284137/GSM8678395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678396,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,212,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678396,,,train,sda-all,samples/GSE284137/GSM8678396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.79, ""life_stage"": 0.71}",,
GSM8678397,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,3w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,271,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678397,,,train,sda-all,samples/GSE284137/GSM8678397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.35000000000000003, ""life_stage"": 0.66}",uberon,low_confidence_annotation
GSM8678398,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,250,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678398,,,train,sda-all,samples/GSE284137/GSM8678398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.5700000000000001, ""life_stage"": 0.42}",uberon;life_stage,low_confidence_annotation
GSM8678399,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,178,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678399,,,train,sda-all,samples/GSE284137/GSM8678399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.89, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8678400,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,172,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678400,,,train,sda-all,samples/GSE284137/GSM8678400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.8300000000000001, ""life_stage"": 0.65}",,
GSM8678401,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,juvenile,3w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,179,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678401,,,train,sda-all,samples/GSE284137/GSM8678401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.6000000000000001, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678402,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,3w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,185,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678402,,,train,sda-all,samples/GSE284137/GSM8678402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.66, ""life_stage"": 0.6000000000000001}",,
GSM8678403,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,234,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678403,,,train,sda-all,samples/GSE284137/GSM8678403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.46, ""life_stage"": 0.56}",uberon;life_stage,low_confidence_annotation
GSM8678404,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,3w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,267,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678404,,,train,sda-all,samples/GSE284137/GSM8678404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.5, ""life_stage"": 0.59}",uberon;life_stage,low_confidence_annotation
GSM8678405,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,187,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678405,,,train,sda-all,samples/GSE284137/GSM8678405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.92, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8678406,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,3w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,177,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678406,,,train,sda-all,samples/GSE284137/GSM8678406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.84, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8678407,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,3w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,118,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678407,,,train,sda-all,samples/GSE284137/GSM8678407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.64, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8678408,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,3w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,131,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678408,,,train,sda-all,samples/GSE284137/GSM8678408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.75, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM8678409,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,278,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678409,,,train,sda-all,samples/GSE284137/GSM8678409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.71, ""life_stage"": 0.89}",,
GSM8678410,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,288,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678410,,,train,sda-all,samples/GSE284137/GSM8678410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.61, ""life_stage"": 0.9500000000000001}",,
GSM8678411,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,221,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678411,,,train,sda-all,samples/GSE284137/GSM8678411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.47000000000000003, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM8678412,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,234,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678412,,,train,sda-all,samples/GSE284137/GSM8678412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.71, ""life_stage"": 0.79}",,
GSM8678413,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,190,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678413,,,train,sda-all,samples/GSE284137/GSM8678413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.92, ""life_stage"": 0.88}",,
GSM8678414,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,93,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678414,,,train,sda-all,samples/GSE284137/GSM8678414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 0.86}",,
GSM8678415,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,249,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678415,,,train,sda-all,samples/GSE284137/GSM8678415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678416,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,336,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678416,,,train,sda-all,samples/GSE284137/GSM8678416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.64, ""life_stage"": 0.9500000000000001}",,
GSM8678417,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,253,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678417,,,train,sda-all,samples/GSE284137/GSM8678417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.89, ""life_stage"": 0.7000000000000001}",,
GSM8678418,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,290,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678418,,,train,sda-all,samples/GSE284137/GSM8678418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 0.9400000000000001}",,
GSM8678419,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,59,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678419,,,train,sda-all,samples/GSE284137/GSM8678419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.64, ""life_stage"": 0.99}",,
GSM8678420,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,240,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678420,,,train,sda-all,samples/GSE284137/GSM8678420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678421,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,84,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678421,,,train,sda-all,samples/GSE284137/GSM8678421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.54, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678422,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,178,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678422,,,train,sda-all,samples/GSE284137/GSM8678422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 0.86}",,
GSM8678423,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,172,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678423,,,train,sda-all,samples/GSE284137/GSM8678423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM8678424,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,127,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678424,,,train,sda-all,samples/GSE284137/GSM8678424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.6900000000000001, ""life_stage"": 0.99}",,
GSM8678425,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,177,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678425,,,train,sda-all,samples/GSE284137/GSM8678425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.75, ""life_stage"": 0.98}",,
GSM8678426,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,juvenile,2w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,205,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678426,,,train,sda-all,samples/GSE284137/GSM8678426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.49, ""life_stage"": 0.32}",uberon;life_stage,low_confidence_annotation
GSM8678427,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,2w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,183,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678427,,,train,sda-all,samples/GSE284137/GSM8678427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.84, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678428,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,347,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678428,,,train,sda-all,samples/GSE284137/GSM8678428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.61, ""life_stage"": 0.99}",,
GSM8678429,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,410,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678429,,,train,sda-all,samples/GSE284137/GSM8678429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678430,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,422,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678430,,,train,sda-all,samples/GSE284137/GSM8678430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8678431,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,441,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678431,,,train,sda-all,samples/GSE284137/GSM8678431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 0.98}",,
GSM8678432,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,240,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678432,,,train,sda-all,samples/GSE284137/GSM8678432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM8678433,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,251,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678433,,,train,sda-all,samples/GSE284137/GSM8678433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.6900000000000001, ""life_stage"": 0.97}",,
GSM8678434,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,333,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678434,,,train,sda-all,samples/GSE284137/GSM8678434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM8678435,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,320,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678435,,,train,sda-all,samples/GSE284137/GSM8678435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678436,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,341,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678436,,,train,sda-all,samples/GSE284137/GSM8678436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678437,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,338,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678437,,,train,sda-all,samples/GSE284137/GSM8678437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM8678438,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,255,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678438,,,train,sda-all,samples/GSE284137/GSM8678438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 0.99}",,
GSM8678439,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,235,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678439,,,train,sda-all,samples/GSE284137/GSM8678439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 0.89}",,
GSM8678440,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,319,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678440,,,train,sda-all,samples/GSE284137/GSM8678440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678441,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,309,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678441,,,train,sda-all,samples/GSE284137/GSM8678441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678442,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,402,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678442,,,train,sda-all,samples/GSE284137/GSM8678442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 0.98}",,
GSM8678443,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,333,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678443,,,train,sda-all,samples/GSE284137/GSM8678443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8678444,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,243,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678444,,,train,sda-all,samples/GSE284137/GSM8678444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM8678445,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,253,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678445,,,train,sda-all,samples/GSE284137/GSM8678445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678446,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,397,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678446,,,train,sda-all,samples/GSE284137/GSM8678446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678447,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,389,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678447,,,train,sda-all,samples/GSE284137/GSM8678447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678448,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,401,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678448,,,train,sda-all,samples/GSE284137/GSM8678448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM8678449,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,303,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678449,,,train,sda-all,samples/GSE284137/GSM8678449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678450,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,336,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678450,,,train,sda-all,samples/GSE284137/GSM8678450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678451,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,352,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678451,,,train,sda-all,samples/GSE284137/GSM8678451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678452,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,342,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678452,,,train,sda-all,samples/GSE284137/GSM8678452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678453,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,340,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678453,,,train,sda-all,samples/GSE284137/GSM8678453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678454,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,254,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678454,,,train,sda-all,samples/GSE284137/GSM8678454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678455,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,456,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678455,,,train,sda-all,samples/GSE284137/GSM8678455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678456,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,286,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678456,,,train,sda-all,samples/GSE284137/GSM8678456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678457,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,383,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678457,,,train,sda-all,samples/GSE284137/GSM8678457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678458,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,369,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678458,,,train,sda-all,samples/GSE284137/GSM8678458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8678459,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,288,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678459,,,train,sda-all,samples/GSE284137/GSM8678459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678460,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,311,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678460,,,train,sda-all,samples/GSE284137/GSM8678460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8678461,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,323,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678461,,,train,sda-all,samples/GSE284137/GSM8678461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678462,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,263,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678462,,,train,sda-all,samples/GSE284137/GSM8678462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM8678463,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,352,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678463,,,train,sda-all,samples/GSE284137/GSM8678463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8678464,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,377,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678464,,,train,sda-all,samples/GSE284137/GSM8678464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8678465,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,345,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678465,,,train,sda-all,samples/GSE284137/GSM8678465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678466,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,291,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678466,,,train,sda-all,samples/GSE284137/GSM8678466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8678467,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,383,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678467,,,train,sda-all,samples/GSE284137/GSM8678467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678468,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,328,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678468,,,train,sda-all,samples/GSE284137/GSM8678468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678469,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,372,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678469,,,train,sda-all,samples/GSE284137/GSM8678469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8678470,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,362,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678470,,,train,sda-all,samples/GSE284137/GSM8678470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678471,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,297,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678471,,,train,sda-all,samples/GSE284137/GSM8678471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8678472,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,260,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678472,,,train,sda-all,samples/GSE284137/GSM8678472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM8678473,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,339,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678473,,,train,sda-all,samples/GSE284137/GSM8678473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8678474,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,aged,age rule: age with unit,aged,2yr,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,259,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678474,,,train,sda-all,samples/GSE284137/GSM8678474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8678475,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,39,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678475,,,train,sda-all,samples/GSE284137/GSM8678475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8678476,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,33,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678476,,,train,sda-all,samples/GSE284137/GSM8678476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.5700000000000001, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678477,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,29,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678477,,,train,sda-all,samples/GSE284137/GSM8678477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.8300000000000001, ""life_stage"": 0.93}",,
GSM8678478,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,48,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678478,,,train,sda-all,samples/GSE284137/GSM8678478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.77, ""life_stage"": 0.8200000000000001}",,
GSM8678479,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,61,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678479,,,train,sda-all,samples/GSE284137/GSM8678479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.62, ""life_stage"": 0.87}",,
GSM8678480,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,287,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678480,,,train,sda-all,samples/GSE284137/GSM8678480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.56, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678481,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,293,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678481,,,train,sda-all,samples/GSE284137/GSM8678481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678482,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,228,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678482,,,train,sda-all,samples/GSE284137/GSM8678482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 0.92}",,
GSM8678483,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,242,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678483,,,train,sda-all,samples/GSE284137/GSM8678483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM8678484,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,237,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678484,,,train,sda-all,samples/GSE284137/GSM8678484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 0.99}",,
GSM8678485,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,207,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678485,,,train,sda-all,samples/GSE284137/GSM8678485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678486,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,295,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678486,,,train,sda-all,samples/GSE284137/GSM8678486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678487,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,223,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678487,,,train,sda-all,samples/GSE284137/GSM8678487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678488,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,315,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678488,,,train,sda-all,samples/GSE284137/GSM8678488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 0.93}",,
GSM8678489,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,264,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678489,,,train,sda-all,samples/GSE284137/GSM8678489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM8678490,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,251,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678490,,,train,sda-all,samples/GSE284137/GSM8678490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM8678491,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,96,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678491,,,train,sda-all,samples/GSE284137/GSM8678491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.4, ""life_stage"": 0.39}",uberon;life_stage,low_confidence_annotation
GSM8678492,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,92,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678492,,,train,sda-all,samples/GSE284137/GSM8678492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.5, ""life_stage"": 0.42}",uberon;life_stage,low_confidence_annotation
GSM8678493,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,83,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678493,,,train,sda-all,samples/GSE284137/GSM8678493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.85, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8678494,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,84,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678494,,,train,sda-all,samples/GSE284137/GSM8678494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.89, ""life_stage"": 0.72}",,
GSM8678495,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,106,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678495,,,train,sda-all,samples/GSE284137/GSM8678495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.55, ""life_stage"": 0.38}",uberon;life_stage,low_confidence_annotation
GSM8678496,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,109,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678496,,,train,sda-all,samples/GSE284137/GSM8678496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.77, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8678497,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,97,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678497,,,train,sda-all,samples/GSE284137/GSM8678497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.56, ""life_stage"": 0.30000000000000004}",uberon;life_stage,low_confidence_annotation
GSM8678498,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,neonatal or infant,1w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,93,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678498,,,train,sda-all,samples/GSE284137/GSM8678498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.51, ""life_stage"": 0.24}",uberon;life_stage,low_confidence_annotation
GSM8678499,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,100,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678499,,,train,sda-all,samples/GSE284137/GSM8678499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.72, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8678500,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,105,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678500,,,train,sda-all,samples/GSE284137/GSM8678500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.89, ""life_stage"": 0.62}",,
GSM8678501,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,neonatal or infant,age rule: age with unit,not stated,1w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,146,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678501,,,train,sda-all,samples/GSE284137/GSM8678501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.65, ""life_stage"": 0.65}",,
GSM8678502,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,120,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678502,,,train,sda-all,samples/GSE284137/GSM8678502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.6900000000000001, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8678503,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,222,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678503,,,train,sda-all,samples/GSE284137/GSM8678503,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.59, ""life_stage"": 0.52}",uberon;life_stage,low_confidence_annotation
GSM8678504,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,neonatal or infant,1w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,88,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678504,,,train,sda-all,samples/GSE284137/GSM8678504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678505,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,96,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678505,,,train,sda-all,samples/GSE284137/GSM8678505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.91, ""life_stage"": 0.62}",,
GSM8678506,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,237,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678506,,,train,sda-all,samples/GSE284137/GSM8678506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.85, ""life_stage"": 0.78}",,
GSM8678507,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: age with unit,not stated,1w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,144,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678507,,,train,sda-all,samples/GSE284137/GSM8678507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.6900000000000001, ""life_stage"": 0.73}",,
GSM8678508,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,353,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678508,,,train,sda-all,samples/GSE284137/GSM8678508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678509,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,386,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678509,,,train,sda-all,samples/GSE284137/GSM8678509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678510,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,373,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678510,,,train,sda-all,samples/GSE284137/GSM8678510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678511,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,361,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678511,,,train,sda-all,samples/GSE284137/GSM8678511,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8678512,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,370,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678512,,,train,sda-all,samples/GSE284137/GSM8678512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8678513,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,328,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678513,,,train,sda-all,samples/GSE284137/GSM8678513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8678514,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,46,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678514,,,train,sda-all,samples/GSE284137/GSM8678514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.35000000000000003, ""life_stage"": 0.76}",uberon,low_confidence_annotation
GSM8678515,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,53,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678515,,,train,sda-all,samples/GSE284137/GSM8678515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.46, ""life_stage"": 0.88}",uberon,low_confidence_annotation
GSM8678516,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,56,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678516,,,train,sda-all,samples/GSE284137/GSM8678516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.65, ""life_stage"": 0.81}",,
GSM8678517,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,49,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678517,,,train,sda-all,samples/GSE284137/GSM8678517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.71, ""life_stage"": 0.64}",,
GSM8678518,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,50,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678518,,,train,sda-all,samples/GSE284137/GSM8678518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.73, ""life_stage"": 0.78}",,
GSM8678519,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,neonatal or infant,age rule: days in an age series,not stated,0d,female,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,65,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678519,,,train,sda-all,samples/GSE284137/GSM8678519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.74, ""life_stage"": 0.89}",,
GSM8678520,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,417,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678520,,,train,sda-all,samples/GSE284137/GSM8678520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678521,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,324,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678521,,,train,sda-all,samples/GSE284137/GSM8678521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM8678522,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,346,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678522,,,train,sda-all,samples/GSE284137/GSM8678522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.54, ""life_stage"": 0.86}",uberon,low_confidence_annotation
GSM8678523,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,330,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678523,,,train,sda-all,samples/GSE284137/GSM8678523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM8678524,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,231,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678524,,,train,sda-all,samples/GSE284137/GSM8678524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678525,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,1yr,male,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,231,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678525,,,train,sda-all,samples/GSE284137/GSM8678525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678526,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,352,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678526,,,train,sda-all,samples/GSE284137/GSM8678526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.36, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678527,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,374,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678527,,,train,sda-all,samples/GSE284137/GSM8678527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 0.98}",,
GSM8678528,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,283,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678528,,,train,sda-all,samples/GSE284137/GSM8678528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678529,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,283,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678529,,,train,sda-all,samples/GSE284137/GSM8678529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8678530,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,315,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678530,,,train,sda-all,samples/GSE284137/GSM8678530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 0.99}",,
GSM8678531,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,1yr,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,246,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678531,,,train,sda-all,samples/GSE284137/GSM8678531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.64, ""life_stage"": 0.99}",,
GSM8678532,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,248,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678532,,,train,sda-all,samples/GSE284137/GSM8678532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678533,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,271,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678533,,,train,sda-all,samples/GSE284137/GSM8678533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678534,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,225,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678534,,,train,sda-all,samples/GSE284137/GSM8678534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8678535,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,6m,female,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,257,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678535,,,train,sda-all,samples/GSE284137/GSM8678535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8678536,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,341,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678536,,,train,sda-all,samples/GSE284137/GSM8678536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.93, ""life_stage"": 0.98}",,
GSM8678537,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,273,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678537,,,train,sda-all,samples/GSE284137/GSM8678537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8678538,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,196,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678538,,,train,sda-all,samples/GSE284137/GSM8678538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678539,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,398,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678539,,,train,sda-all,samples/GSE284137/GSM8678539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.87, ""life_stage"": 0.89}",,
GSM8678540,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,6m,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,379,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678540,,,train,sda-all,samples/GSE284137/GSM8678540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.81, ""life_stage"": 0.97}",,
GSM8678541,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,276,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678541,,,train,sda-all,samples/GSE284137/GSM8678541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8678542,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,259,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678542,,,train,sda-all,samples/GSE284137/GSM8678542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8678543,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,263,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678543,,,train,sda-all,samples/GSE284137/GSM8678543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM8678544,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,247,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678544,,,train,sda-all,samples/GSE284137/GSM8678544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8678545,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,239,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678545,,,train,sda-all,samples/GSE284137/GSM8678545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678546,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,264,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678546,,,train,sda-all,samples/GSE284137/GSM8678546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678547,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,540,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678547,,,train,sda-all,samples/GSE284137/GSM8678547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8678548,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,444,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678548,,,train,sda-all,samples/GSE284137/GSM8678548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM8678549,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,569,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678549,,,train,sda-all,samples/GSE284137/GSM8678549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678550,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,471,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678550,,,train,sda-all,samples/GSE284137/GSM8678550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678551,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,450,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678551,,,train,sda-all,samples/GSE284137/GSM8678551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678552,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,aged,age rule: age with unit,aged,2yr,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,446,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678552,,,train,sda-all,samples/GSE284137/GSM8678552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678553,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0008972,right colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,261,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678553,,,train,sda-all,samples/GSE284137/GSM8678553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.37, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678554,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,201,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678554,,,train,sda-all,samples/GSE284137/GSM8678554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.9500000000000001, ""life_stage"": 0.8200000000000001}",,
GSM8678555,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,139,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678555,,,train,sda-all,samples/GSE284137/GSM8678555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.85, ""life_stage"": 0.91}",,
GSM8678556,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,447,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678556,,,train,sda-all,samples/GSE284137/GSM8678556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.74, ""life_stage"": 0.93}",,
GSM8678557,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,405,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678557,,,train,sda-all,samples/GSE284137/GSM8678557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.6900000000000001, ""life_stage"": 0.86}",,
GSM8678558,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,354,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678558,,,train,sda-all,samples/GSE284137/GSM8678558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.5, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678559,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,261,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678559,,,train,sda-all,samples/GSE284137/GSM8678559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.55, ""life_stage"": 0.64}",uberon,low_confidence_annotation
GSM8678560,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,174,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678560,,,train,sda-all,samples/GSE284137/GSM8678560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.9500000000000001}",,
GSM8678561,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,222,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678561,,,train,sda-all,samples/GSE284137/GSM8678561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 0.79}",,
GSM8678562,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,326,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678562,,,train,sda-all,samples/GSE284137/GSM8678562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.75, ""life_stage"": 0.99}",,
GSM8678563,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,280,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678563,,,train,sda-all,samples/GSE284137/GSM8678563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.75, ""life_stage"": 0.9500000000000001}",,
GSM8678564,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,238,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678564,,,train,sda-all,samples/GSE284137/GSM8678564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 0.8200000000000001}",,
GSM8678565,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,156,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678565,,,train,sda-all,samples/GSE284137/GSM8678565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.46, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678566,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,243,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678566,,,train,sda-all,samples/GSE284137/GSM8678566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.92, ""life_stage"": 0.98}",,
GSM8678567,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,179,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678567,,,train,sda-all,samples/GSE284137/GSM8678567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.79, ""life_stage"": 0.79}",,
GSM8678568,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,12w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,186,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678568,,,train,sda-all,samples/GSE284137/GSM8678568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8678569,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,385,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678569,,,train,sda-all,samples/GSE284137/GSM8678569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678570,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,304,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678570,,,train,sda-all,samples/GSE284137/GSM8678570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.36, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678571,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,159,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678571,,,train,sda-all,samples/GSE284137/GSM8678571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8678572,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,286,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678572,,,train,sda-all,samples/GSE284137/GSM8678572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.8, ""life_stage"": 0.97}",,
GSM8678573,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,277,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678573,,,train,sda-all,samples/GSE284137/GSM8678573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678574,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,343,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678574,,,train,sda-all,samples/GSE284137/GSM8678574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.47000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678575,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,213,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678575,,,train,sda-all,samples/GSE284137/GSM8678575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 0.98}",,
GSM8678576,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,186,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678576,,,train,sda-all,samples/GSE284137/GSM8678576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678577,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,128,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678577,,,train,sda-all,samples/GSE284137/GSM8678577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678578,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,179,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678578,,,train,sda-all,samples/GSE284137/GSM8678578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM8678579,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,317,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678579,,,train,sda-all,samples/GSE284137/GSM8678579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8678580,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,261,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678580,,,train,sda-all,samples/GSE284137/GSM8678580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.52, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678581,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,173,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678581,,,train,sda-all,samples/GSE284137/GSM8678581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8678582,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,149,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678582,,,train,sda-all,samples/GSE284137/GSM8678582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678583,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,160,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678583,,,train,sda-all,samples/GSE284137/GSM8678583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM8678584,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,juvenile,6w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,186,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678584,,,train,sda-all,samples/GSE284137/GSM8678584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.87, ""life_stage"": 0.99}",,
GSM8678585,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,134,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678585,,,train,sda-all,samples/GSE284137/GSM8678585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678586,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,151,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678586,,,train,sda-all,samples/GSE284137/GSM8678586,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678587,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,131,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678587,,,train,sda-all,samples/GSE284137/GSM8678587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678588,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,138,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678588,,,train,sda-all,samples/GSE284137/GSM8678588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 0.93}",,
GSM8678589,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,216,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678589,,,train,sda-all,samples/GSE284137/GSM8678589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8678590,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,154,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678590,,,train,sda-all,samples/GSE284137/GSM8678590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.68, ""life_stage"": 0.9500000000000001}",,
GSM8678591,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,326,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678591,,,train,sda-all,samples/GSE284137/GSM8678591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.45, ""life_stage"": 0.84}",uberon,low_confidence_annotation
GSM8678592,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,332,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678592,,,train,sda-all,samples/GSE284137/GSM8678592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.5700000000000001, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM8678593,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,159,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678593,,,train,sda-all,samples/GSE284137/GSM8678593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.79, ""life_stage"": 0.97}",,
GSM8678594,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,129,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678594,,,train,sda-all,samples/GSE284137/GSM8678594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.93, ""life_stage"": 0.88}",,
GSM8678595,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,229,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678595,,,train,sda-all,samples/GSE284137/GSM8678595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.6900000000000001, ""life_stage"": 0.9500000000000001}",,
GSM8678596,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,277,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678596,,,train,sda-all,samples/GSE284137/GSM8678596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.81, ""life_stage"": 0.92}",,
GSM8678597,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,198,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678597,,,train,sda-all,samples/GSE284137/GSM8678597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.76, ""life_stage"": 0.92}",,
GSM8678598,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,223,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678598,,,train,sda-all,samples/GSE284137/GSM8678598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.62, ""life_stage"": 0.66}",,
GSM8678599,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,176,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678599,,,train,sda-all,samples/GSE284137/GSM8678599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.84, ""life_stage"": 0.92}",,
GSM8678600,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,195,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678600,,,train,sda-all,samples/GSE284137/GSM8678600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.93}",,
GSM8678601,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,229,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678601,,,train,sda-all,samples/GSE284137/GSM8678601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8200000000000001, ""life_stage"": 0.91}",,
GSM8678602,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,205,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678602,,,train,sda-all,samples/GSE284137/GSM8678602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.79, ""life_stage"": 0.87}",,
GSM8678603,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,253,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678603,,,train,sda-all,samples/GSE284137/GSM8678603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.45, ""life_stage"": 0.79}",uberon,low_confidence_annotation
GSM8678604,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,210,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678604,,,train,sda-all,samples/GSE284137/GSM8678604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.45, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678605,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,132,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678605,,,train,sda-all,samples/GSE284137/GSM8678605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.8300000000000001, ""life_stage"": 0.8}",,
GSM8678606,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,124,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678606,,,train,sda-all,samples/GSE284137/GSM8678606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.91, ""life_stage"": 0.99}",,
GSM8678607,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,132,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678607,,,train,sda-all,samples/GSE284137/GSM8678607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.59, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678608,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,136,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678608,,,train,sda-all,samples/GSE284137/GSM8678608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.66, ""life_stage"": 0.9500000000000001}",,
GSM8678609,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,187,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678609,,,train,sda-all,samples/GSE284137/GSM8678609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678610,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,181,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678610,,,train,sda-all,samples/GSE284137/GSM8678610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.49, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678611,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,171,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678611,,,train,sda-all,samples/GSE284137/GSM8678611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.84, ""life_stage"": 0.9400000000000001}",,
GSM8678612,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,164,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678612,,,train,sda-all,samples/GSE284137/GSM8678612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.59, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678613,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,215,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678613,,,train,sda-all,samples/GSE284137/GSM8678613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.6900000000000001, ""life_stage"": 0.9500000000000001}",,
GSM8678614,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,205,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678614,,,train,sda-all,samples/GSE284137/GSM8678614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.77, ""life_stage"": 0.91}",,
GSM8678615,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,208,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678615,,,train,sda-all,samples/GSE284137/GSM8678615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.93, ""life_stage"": 0.92}",,
GSM8678616,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,131,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678616,,,train,sda-all,samples/GSE284137/GSM8678616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 0.67}",uberon,low_confidence_annotation
GSM8678617,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,115,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678617,,,train,sda-all,samples/GSE284137/GSM8678617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.54, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678618,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,203,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678618,,,train,sda-all,samples/GSE284137/GSM8678618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.85, ""life_stage"": 0.89}",,
GSM8678619,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,211,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678619,,,train,sda-all,samples/GSE284137/GSM8678619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.97, ""life_stage"": 0.92}",,
GSM8678620,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,148,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678620,,,train,sda-all,samples/GSE284137/GSM8678620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.41000000000000003, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678621,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,126,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678621,,,train,sda-all,samples/GSE284137/GSM8678621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678622,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,48,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678622,,,train,sda-all,samples/GSE284137/GSM8678622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678623,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,80,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678623,,,train,sda-all,samples/GSE284137/GSM8678623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678624,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,204,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678624,,,train,sda-all,samples/GSE284137/GSM8678624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8678625,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,276,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678625,,,train,sda-all,samples/GSE284137/GSM8678625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.62, ""life_stage"": 0.99}",,
GSM8678626,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,120,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678626,,,train,sda-all,samples/GSE284137/GSM8678626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.47000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678627,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,131,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678627,,,train,sda-all,samples/GSE284137/GSM8678627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678628,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,121,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678628,,,train,sda-all,samples/GSE284137/GSM8678628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.85, ""life_stage"": 0.9500000000000001}",,
GSM8678629,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,114,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678629,,,train,sda-all,samples/GSE284137/GSM8678629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM8678630,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,79,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678630,,,train,sda-all,samples/GSE284137/GSM8678630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.76, ""life_stage"": 0.98}",,
GSM8678631,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,90,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678631,,,train,sda-all,samples/GSE284137/GSM8678631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM8678632,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,172,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678632,,,train,sda-all,samples/GSE284137/GSM8678632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.47000000000000003, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678633,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,113,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678633,,,train,sda-all,samples/GSE284137/GSM8678633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678634,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,82,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678634,,,train,sda-all,samples/GSE284137/GSM8678634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678635,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,100,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678635,,,train,sda-all,samples/GSE284137/GSM8678635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.91, ""life_stage"": 0.97}",,
GSM8678636,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,59,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678636,,,train,sda-all,samples/GSE284137/GSM8678636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8678637,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,juvenile,6w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,81,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678637,,,train,sda-all,samples/GSE284137/GSM8678637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM8678638,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,203,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678638,,,train,sda-all,samples/GSE284137/GSM8678638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.56, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678639,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,137,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678639,,,train,sda-all,samples/GSE284137/GSM8678639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.61, ""life_stage"": 0.85}",,
GSM8678640,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,149,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678640,,,train,sda-all,samples/GSE284137/GSM8678640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 0.79}",,
GSM8678641,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,110,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678641,,,train,sda-all,samples/GSE284137/GSM8678641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.89, ""life_stage"": 0.91}",,
GSM8678642,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,143,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678642,,,train,sda-all,samples/GSE284137/GSM8678642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.73, ""life_stage"": 0.9500000000000001}",,
GSM8678643,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,219,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678643,,,train,sda-all,samples/GSE284137/GSM8678643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.68, ""life_stage"": 0.84}",,
GSM8678644,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,143,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678644,,,train,sda-all,samples/GSE284137/GSM8678644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.46, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678645,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,187,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678645,,,train,sda-all,samples/GSE284137/GSM8678645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 0.6900000000000001}",,
GSM8678646,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,156,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678646,,,train,sda-all,samples/GSE284137/GSM8678646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.88, ""life_stage"": 0.79}",,
GSM8678647,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,157,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678647,,,train,sda-all,samples/GSE284137/GSM8678647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.9500000000000001, ""life_stage"": 0.9400000000000001}",,
GSM8678648,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,106,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678648,,,train,sda-all,samples/GSE284137/GSM8678648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.75, ""life_stage"": 0.93}",,
GSM8678649,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,111,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678649,,,train,sda-all,samples/GSE284137/GSM8678649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.7000000000000001, ""life_stage"": 0.81}",,
GSM8678650,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,244,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678650,,,train,sda-all,samples/GSE284137/GSM8678650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678651,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,180,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678651,,,train,sda-all,samples/GSE284137/GSM8678651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.4, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM8678652,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,86,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678652,,,train,sda-all,samples/GSE284137/GSM8678652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.77, ""life_stage"": 0.6900000000000001}",,
GSM8678653,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,263,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678653,,,train,sda-all,samples/GSE284137/GSM8678653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.68, ""life_stage"": 0.9400000000000001}",,
GSM8678654,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,juvenile,age rule: age with unit,juvenile,4w,female,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,219,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678654,,,train,sda-all,samples/GSE284137/GSM8678654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.76, ""life_stage"": 0.9400000000000001}",,
GSM8678655,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,347,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678655,,,train,sda-all,samples/GSE284137/GSM8678655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678656,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,257,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678656,,,train,sda-all,samples/GSE284137/GSM8678656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.43, ""life_stage"": 0.67}",uberon,low_confidence_annotation
GSM8678657,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,82,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678657,,,train,sda-all,samples/GSE284137/GSM8678657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.8300000000000001, ""life_stage"": 0.89}",,
GSM8678658,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,106,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678658,,,train,sda-all,samples/GSE284137/GSM8678658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.81, ""life_stage"": 0.93}",,
GSM8678659,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,255,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678659,,,train,sda-all,samples/GSE284137/GSM8678659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.73, ""life_stage"": 0.92}",,
GSM8678660,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,8w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,92,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678660,,,train,sda-all,samples/GSE284137/GSM8678660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.77, ""life_stage"": 0.93}",,
GSM8678661,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,283,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678661,,,train,sda-all,samples/GSE284137/GSM8678661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.61, ""life_stage"": 0.85}",,
GSM8678662,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,242,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678662,,,train,sda-all,samples/GSE284137/GSM8678662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.81, ""life_stage"": 0.87}",,
GSM8678663,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,129,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678663,,,train,sda-all,samples/GSE284137/GSM8678663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.52, ""life_stage"": 0.8200000000000001}",uberon,low_confidence_annotation
GSM8678664,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,177,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678664,,,train,sda-all,samples/GSE284137/GSM8678664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678665,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,160,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678665,,,train,sda-all,samples/GSE284137/GSM8678665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.89, ""life_stage"": 0.9400000000000001}",,
GSM8678666,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,151,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678666,,,train,sda-all,samples/GSE284137/GSM8678666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.96, ""life_stage"": 0.89}",,
GSM8678667,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,278,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678667,,,train,sda-all,samples/GSE284137/GSM8678667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.84, ""life_stage"": 0.98}",,
GSM8678668,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,154,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678668,,,train,sda-all,samples/GSE284137/GSM8678668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.7000000000000001, ""life_stage"": 0.97}",,
GSM8678669,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,212,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678669,,,train,sda-all,samples/GSE284137/GSM8678669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.43, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678670,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,176,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678670,,,train,sda-all,samples/GSE284137/GSM8678670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.5, ""life_stage"": 0.78}",uberon,low_confidence_annotation
GSM8678671,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,128,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678671,,,train,sda-all,samples/GSE284137/GSM8678671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8, ""life_stage"": 0.97}",,
GSM8678672,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,171,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678672,,,train,sda-all,samples/GSE284137/GSM8678672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.92, ""life_stage"": 0.84}",,
GSM8678673,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,367,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678673,,,train,sda-all,samples/GSE284137/GSM8678673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.84, ""life_stage"": 0.91}",,
GSM8678674,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,294,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678674,,,train,sda-all,samples/GSE284137/GSM8678674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.71, ""life_stage"": 0.91}",,
GSM8678675,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,150,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678675,,,train,sda-all,samples/GSE284137/GSM8678675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.41000000000000003, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM8678676,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,179,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678676,,,train,sda-all,samples/GSE284137/GSM8678676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.41000000000000003, ""life_stage"": 0.5700000000000001}",uberon;life_stage,low_confidence_annotation
GSM8678677,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,138,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678677,,,train,sda-all,samples/GSE284137/GSM8678677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.79, ""life_stage"": 0.9400000000000001}",,
GSM8678678,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,163,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678678,,,train,sda-all,samples/GSE284137/GSM8678678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.97}",,
GSM8678679,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,245,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678679,,,train,sda-all,samples/GSE284137/GSM8678679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.81, ""life_stage"": 0.86}",,
GSM8678680,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,149,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678680,,,train,sda-all,samples/GSE284137/GSM8678680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.44, ""life_stage"": 0.66}",uberon,low_confidence_annotation
GSM8678681,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,156,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678681,,,train,sda-all,samples/GSE284137/GSM8678681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.49, ""life_stage"": 0.74}",uberon,low_confidence_annotation
GSM8678682,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,F,adult,age rule: age with unit,adult,8w,female,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,175,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678682,,,train,sda-all,samples/GSE284137/GSM8678682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9500000000000001, ""life_stage"": 0.86}",,
GSM8678683,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,216,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678683,,,train,sda-all,samples/GSE284137/GSM8678683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678684,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,207,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678684,,,train,sda-all,samples/GSE284137/GSM8678684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.5700000000000001, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678685,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,144,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678685,,,train,sda-all,samples/GSE284137/GSM8678685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.87, ""life_stage"": 0.9500000000000001}",,
GSM8678686,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,133,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678686,,,train,sda-all,samples/GSE284137/GSM8678686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.85, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678687,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,197,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678687,,,train,sda-all,samples/GSE284137/GSM8678687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.8200000000000001, ""life_stage"": 0.91}",,
GSM8678688,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,236,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678688,,,train,sda-all,samples/GSE284137/GSM8678688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.55, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM8678689,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,256,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678689,,,train,sda-all,samples/GSE284137/GSM8678689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.85, ""life_stage"": 0.9500000000000001}",,
GSM8678690,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,112,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678690,,,train,sda-all,samples/GSE284137/GSM8678690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.79, ""life_stage"": 0.71}",,
GSM8678691,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,130,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678691,,,train,sda-all,samples/GSE284137/GSM8678691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.87, ""life_stage"": 0.88}",,
GSM8678692,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,135,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678692,,,train,sda-all,samples/GSE284137/GSM8678692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.97}",,
GSM8678693,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,adult,age rule: age with unit,adult,12w,male,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,157,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678693,,,train,sda-all,samples/GSE284137/GSM8678693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8678694,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,135,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678694,,,train,sda-all,samples/GSE284137/GSM8678694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.52, ""life_stage"": 0.5700000000000001}",uberon;life_stage,low_confidence_annotation
GSM8678695,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,92,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678695,,,train,sda-all,samples/GSE284137/GSM8678695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.44, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM8678696,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,184,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678696,,,train,sda-all,samples/GSE284137/GSM8678696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.75, ""life_stage"": 0.99}",,
GSM8678697,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Middle colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,232,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678697,,,train,sda-all,samples/GSE284137/GSM8678697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.8300000000000001, ""life_stage"": 0.85}",,
GSM8678698,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,42,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678698,,,train,sda-all,samples/GSE284137/GSM8678698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.75, ""life_stage"": 0.89}",,
GSM8678699,GSE284137,GSE284137,Tissue and cellular spatiotemporal dynamics in colon aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal colon,primary tissue,,,normal,luna,,M,juvenile,age rule: age with unit,juvenile,4w,male,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,ST (legacy),release v3,ST (legacy),sequencing-based,spatial transcriptomics,,,spot,92,12976,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41125832,,GSM8678699,,,train,sda-all,samples/GSE284137/GSM8678699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.76, ""life_stage"": 0.89}",,
GSM8682763,GSE284353,GSE284353,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004979,asthma,disease,luna,,,adult,luna,adult,Adult,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,119419,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917159109737,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682763,,,train,sda-all,samples/GSE284353/GSM8682763,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8682764,GSE284353,GSE284353,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0005362,vagus X ganglion,Vagal Ganglia,primary tissue,MONDO:0004979,asthma,disease,luna,,,adult,luna,adult,Adult,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,3344,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896935550365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682764,,,train,sda-all,samples/GSE284353/GSM8682764,sda-tissue-disease-2.5,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8682765,GSE284353,GSE284353,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0005362,vagus X ganglion,Vagal Ganglia,primary tissue,MONDO:0004979,asthma,disease,luna,,,adult,luna,adult,Adult,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,2791,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000154469312097,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682765,,,train,sda-all,samples/GSE284353/GSM8682765,sda-tissue-disease-2.5,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8682766,GSE284353,GSE284353,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0005362,vagus X ganglion,Vagal Ganglia,primary tissue,MONDO:0004979,asthma,disease,luna,,,adult,luna,adult,Adult,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,3959,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000343218012081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682766,,,train,sda-all,samples/GSE284353/GSM8682766,sda-tissue-disease-2.5,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8686962,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,normal,luna,,Intact,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2690,19465,counts,pixel,4.7622853422886635,platform_constant,True,H&E,4.7622853422886635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686962,,,train,hesrt,samples/GSE284571/GSM8686962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686963,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,normal,luna,,Intact,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2433,19465,counts,pixel,4.898061586657095,platform_constant,True,H&E,4.898061586657095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686963,,,train,hesrt,samples/GSE284571/GSM8686963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686964,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,normal,luna,,Intact,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2668,19465,counts,pixel,4.781811593608017,platform_constant,True,H&E,4.781811593608017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686964,,,train,hesrt,samples/GSE284571/GSM8686964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686965,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,normal,luna,,Intact,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2770,19465,counts,pixel,4.748223514450942,platform_constant,True,H&E,4.748223514450942,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686965,,,train,hesrt,samples/GSE284571/GSM8686965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8686966,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castrated D15,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2339,19465,counts,pixel,4.871778922215267,platform_constant,True,H&E,4.871778922215267,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686966,,,train,hesrt,samples/GSE284571/GSM8686966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686967,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castrated D15,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2486,19465,counts,pixel,4.859361769647027,platform_constant,True,H&E,4.859361769647027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686967,,,train,hesrt,samples/GSE284571/GSM8686967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM8686968,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castrated D15,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2481,19465,counts,pixel,4.88098459243642,platform_constant,True,H&E,4.88098459243642,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686968,,,train,hesrt,samples/GSE284571/GSM8686968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8686969,GSE284571,GSE284571,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castrated D15,adult,age rule: age with unit,not stated,10–18 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2650,19465,counts,pixel,4.898209311394992,platform_constant,True,H&E,4.898209311394992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686969,,,train,hesrt,samples/GSE284571/GSM8686969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8689371,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2807,32293,counts,pixel,4.50249845831465,platform_constant,True,H&E,4.50249845831465,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689371,,,train,hesrt,samples/GSE284625/GSM8689371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689372,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3436,32293,counts,pixel,4.23247652628068,platform_constant,True,H&E,4.23247652628068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689372,,,train,hesrt,samples/GSE284625/GSM8689372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689373,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2874,32293,counts,pixel,4.231835348076849,platform_constant,True,H&E,4.231835348076849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689373,,,train,hesrt,samples/GSE284625/GSM8689373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689374,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2648,32293,counts,pixel,4.507308569759761,platform_constant,True,H&E,4.507308569759761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689374,,,train,hesrt,samples/GSE284625/GSM8689374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689375,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3575,32293,counts,pixel,4.529032335963865,platform_constant,True,H&E,4.529032335963865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689375,,,train,hesrt,samples/GSE284625/GSM8689375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689376,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2945,32293,counts,pixel,4.230552458096319,platform_constant,True,H&E,4.230552458096319,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689376,,,train,hesrt,samples/GSE284625/GSM8689376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689377,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3079,32293,counts,pixel,4.13242127772878,platform_constant,True,H&E,4.13242127772878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689377,,,train,hesrt,samples/GSE284625/GSM8689377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689378,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3058,32293,counts,pixel,4.2292697879455625,platform_constant,True,H&E,4.2292697879455625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689378,,,train,hesrt,samples/GSE284625/GSM8689378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689379,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3300,32293,counts,pixel,4.23119380584414,platform_constant,True,H&E,4.23119380584414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689379,,,train,hesrt,samples/GSE284625/GSM8689379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689380,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3197,32293,counts,pixel,4.224459320734984,platform_constant,True,H&E,4.224459320734984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689380,,,train,hesrt,samples/GSE284625/GSM8689380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8689381,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2944,32293,counts,pixel,4.505063922872432,platform_constant,True,H&E,4.505063922872432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689381,,,train,hesrt,samples/GSE284625/GSM8689381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689382,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2528,32293,counts,pixel,4.230873107665126,platform_constant,True,H&E,4.230873107665126,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689382,,,train,hesrt,samples/GSE284625/GSM8689382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689383,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3342,32293,counts,pixel,4.497688194201268,platform_constant,True,H&E,4.497688194201268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689383,,,train,hesrt,samples/GSE284625/GSM8689383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689384,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2824,32293,counts,pixel,4.230873107665134,platform_constant,True,H&E,4.230873107665134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689384,,,train,hesrt,samples/GSE284625/GSM8689384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689385,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3133,32293,counts,pixel,4.501857232667193,platform_constant,True,H&E,4.501857232667193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689385,,,train,hesrt,samples/GSE284625/GSM8689385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689386,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3665,32293,counts,pixel,4.23247652628068,platform_constant,True,H&E,4.23247652628068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689386,,,train,hesrt,samples/GSE284625/GSM8689386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689387,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3264,32293,counts,pixel,4.231193805844131,platform_constant,True,H&E,4.231193805844131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689387,,,train,hesrt,samples/GSE284625/GSM8689387,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689388,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3211,32293,counts,pixel,4.2305524580963,platform_constant,True,H&E,4.2305524580963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689388,,,train,hesrt,samples/GSE284625/GSM8689388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689389,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,not stated,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3943,32293,counts,pixel,4.229911025782339,platform_constant,True,H&E,4.229911025782339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689389,,,train,hesrt,samples/GSE284625/GSM8689389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689390,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4173,32293,counts,pixel,4.230873107665135,platform_constant,True,H&E,4.230873107665135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689390,,,train,hesrt,samples/GSE284625/GSM8689390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689391,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3199,32293,counts,pixel,4.131459267345747,platform_constant,True,H&E,4.131459267345747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689391,,,train,hesrt,samples/GSE284625/GSM8689391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689392,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2478,32293,counts,pixel,4.222856130949868,platform_constant,True,H&E,4.222856130949868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689392,,,train,hesrt,samples/GSE284625/GSM8689392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689393,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3522,32293,counts,pixel,4.2315145526443425,platform_constant,True,H&E,4.2315145526443425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689393,,,train,hesrt,samples/GSE284625/GSM8689393,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689394,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3281,32293,counts,pixel,4.503460481254349,platform_constant,True,H&E,4.503460481254349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689394,,,train,hesrt,samples/GSE284625/GSM8689394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689395,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2841,32293,counts,pixel,4.231835348076849,platform_constant,True,H&E,4.231835348076849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689395,,,train,hesrt,samples/GSE284625/GSM8689395,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8689396,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2852,32293,counts,pixel,4.231514552644333,platform_constant,True,H&E,4.231514552644333,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689396,,,train,hesrt,samples/GSE284625/GSM8689396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689397,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3571,32293,counts,pixel,4.254104955297489,platform_constant,True,H&E,4.254104955297489,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689397,,,train,hesrt,samples/GSE284625/GSM8689397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689398,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,perturbation,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3369,32293,counts,pixel,4.501215557844026,platform_constant,True,H&E,4.501215557844026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689398,,,train,hesrt,samples/GSE284625/GSM8689398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689399,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2977,32293,counts,pixel,4.494459064618844,platform_constant,True,H&E,4.494459064618844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689399,,,train,hesrt,samples/GSE284625/GSM8689399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689400,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3555,32293,counts,pixel,4.508240503235703,platform_constant,True,H&E,4.508240503235703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689400,,,train,hesrt,samples/GSE284625/GSM8689400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689401,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3167,32293,counts,pixel,4.50151009112251,platform_constant,True,H&E,4.50151009112251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689401,,,train,hesrt,samples/GSE284625/GSM8689401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.12, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689402,GSE284625,GSE284625,spatial transcriptomics of mouse brain before and after activation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,mouse brain,primary tissue,,,normal,luna,,activated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3153,32293,counts,pixel,4.228118107939417,platform_constant,True,H&E,4.228118107939417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689402,,,train,hesrt,samples/GSE284625/GSM8689402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8690706,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831;MONDO:0003916,malignant pancreatic neoplasm;overnutrition,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3414,19465,counts,um,1.0,verified,True,H&E,3.924391863739493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690706,,,train,sda-all,samples/GSE284695/GSM8690706,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690707,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4444,19465,counts,um,1.0,verified,True,H&E,3.917383513764577,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690707,,,train,sda-all,samples/GSE284695/GSM8690707,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8690708,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2417,19465,counts,um,1.0,verified,True,H&E,3.937814258220533,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690708,,,train,sda-all,samples/GSE284695/GSM8690708,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690709,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2790,19465,counts,um,1.0,verified,True,H&E,3.94355370601887,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690709,,,train,sda-all,samples/GSE284695/GSM8690709,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8690710,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831;MONDO:0011122,malignant pancreatic neoplasm;obesity disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3766,19465,counts,um,1.0,verified,True,H&E,3.946659998047559,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690710,,,train,sda-all,samples/GSE284695/GSM8690710,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690711,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3762,19465,counts,um,1.0,verified,True,H&E,3.903678896909104,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690711,,,train,sda-all,samples/GSE284695/GSM8690711,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690712,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3350,19465,counts,um,1.0,verified,True,H&E,3.903572378115411,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690712,,,train,sda-all,samples/GSE284695/GSM8690712,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8690713,GSE284695,GSE284695,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreatic tumor tissue,tumour tissue,MONDO:0009831;MONDO:0003916,malignant pancreatic neoplasm;overnutrition,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1874,19465,counts,um,1.0,verified,True,H&E,3.969982816649087,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690713,,,train,sda-all,samples/GSE284695/GSM8690713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8691718,GSE284741,GSE284741,The XCL1-XCR1 axis supports intestinal tissue residency and anti-tumor immunity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005550,infectious disease,disease,luna,,LCMV infection and P14 CD8 T cell transfer. 500 ng/mouse of DT was administered by intraperitoneal injection days 4-7 after infection.,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,219239,350,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,,VERIFIED,,,,39841133,,GSM8691718,,,train,sda-all,samples/GSE284741/GSM8691718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8691759,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51820,7280,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206334468172,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691759,,,train,sda-all,samples/GSE284747/GSM8691759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691760,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55811,7025,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011474205984,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691760,,,train,sda-all,samples/GSE284747/GSM8691760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691761,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874;MONDO:0005275,acute myeloid leukemia;lung disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,96419,8261,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999060644773424,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691761,,,train,sda-all,samples/GSE284747/GSM8691761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691762,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874;MONDO:0005275,acute myeloid leukemia;lung disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64442,6929,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691762,,,train,sda-all,samples/GSE284747/GSM8691762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691763,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26713,6227,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041118421052,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691763,,,train,sda-all,samples/GSE284747/GSM8691763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691764,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874,acute myeloid leukemia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,211889,8082,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999871040957383,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691764,,,train,sda-all,samples/GSE284747/GSM8691764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691765,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874;MONDO:0005275,acute myeloid leukemia;lung disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,80583,6377,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999823217442545,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691765,,,train,sda-all,samples/GSE284747/GSM8691765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691766,GSE284747,GSE284747,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874;MONDO:0005275,acute myeloid leukemia;lung disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,105123,6675,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999844870380585,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691766,,,train,sda-all,samples/GSE284747/GSM8691766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8694491,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3258,20551,counts,pixel,3.984330669085371,platform_constant,True,H&E,3.984330669085371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694491,,,train,hesrt,samples/GSE284989/GSM8694491,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694492,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2614,20551,counts,pixel,3.9946842996568295,platform_constant,True,H&E,3.9946842996568295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694492,,,train,hesrt,samples/GSE284989/GSM8694492,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694493,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2604,20551,counts,pixel,4.062518690480048,platform_constant,True,H&E,4.062518690480048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694493,,,train,hesrt,samples/GSE284989/GSM8694493,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694494,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2465,20551,counts,pixel,3.942392489032408,platform_constant,True,H&E,3.942392489032408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694494,,,train,hesrt,samples/GSE284989/GSM8694494,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694495,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2535,20551,counts,pixel,4.030366853653612,platform_constant,True,H&E,4.030366853653612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694495,,,train,hesrt,samples/GSE284989/GSM8694495,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694496,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1978,20551,counts,pixel,3.984457031277133,platform_constant,True,H&E,3.984457031277133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694496,,,train,hesrt,samples/GSE284989/GSM8694496,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694497,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2593,20551,counts,pixel,4.088594601140091,platform_constant,True,H&E,4.088594601140091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694497,,,train,hesrt,samples/GSE284989/GSM8694497,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694498,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3241,20551,counts,pixel,3.9248614481619994,platform_constant,True,H&E,3.9248614481619994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694498,,,train,hesrt,samples/GSE284989/GSM8694498,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694499,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2918,20551,counts,pixel,3.940113919699788,platform_constant,True,H&E,3.940113919699788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694499,,,train,hesrt,samples/GSE284989/GSM8694499,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694500,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2435,20551,counts,pixel,4.046199298899556,platform_constant,True,H&E,4.046199298899556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694500,,,train,hesrt,samples/GSE284989/GSM8694500,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694501,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3211,20551,counts,pixel,4.024355806277597,platform_constant,True,H&E,4.024355806277597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694501,,,train,hesrt,samples/GSE284989/GSM8694501,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694502,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3484,20551,counts,pixel,4.035719409050836,platform_constant,True,H&E,4.035719409050836,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694502,,,train,hesrt,samples/GSE284989/GSM8694502,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694503,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1772,20551,counts,pixel,3.9294809489670706,platform_constant,True,H&E,3.9294809489670706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694503,,,train,hesrt,samples/GSE284989/GSM8694503,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694504,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2590,20551,counts,pixel,3.9294809489670706,platform_constant,True,H&E,3.9294809489670706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694504,,,train,hesrt,samples/GSE284989/GSM8694504,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694505,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3815,20551,counts,pixel,3.946962314984007,platform_constant,True,H&E,3.946962314984007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694505,,,train,hesrt,samples/GSE284989/GSM8694505,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694506,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3530,20551,counts,pixel,3.9091139787625853,platform_constant,True,H&E,3.9091139787625853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694506,,,train,hesrt,samples/GSE284989/GSM8694506,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694507,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2527,20551,counts,pixel,4.3200619456568665,platform_constant,True,H&E,4.3200619456568665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694507,,,train,hesrt,samples/GSE284989/GSM8694507,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694508,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1818,20551,counts,pixel,3.9294809489670706,platform_constant,True,H&E,3.9294809489670706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694508,,,train,hesrt,samples/GSE284989/GSM8694508,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.89, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694509,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1980,20551,counts,pixel,3.9416454682017052,platform_constant,True,H&E,3.9416454682017052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694509,,,train,hesrt,samples/GSE284989/GSM8694509,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694510,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1947,20551,counts,pixel,3.925303821185173,platform_constant,True,H&E,3.925303821185173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694510,,,train,hesrt,samples/GSE284989/GSM8694510,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694511,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,aPD-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2965,20551,counts,pixel,3.9506199424562256,platform_constant,True,H&E,3.9506199424562256,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694511,,,train,hesrt,samples/GSE284989/GSM8694511,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694512,GSE284989,GSE284989,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,MC38 Tumor,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,IgG Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2007,20551,counts,pixel,4.025618747283734,platform_constant,True,H&E,4.025618747283734,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694512,,,train,hesrt,samples/GSE284989/GSM8694512,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8695241,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Virgin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,301143,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051637651225,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695241,,,train,sda-all,samples/GSE285027/GSM8695241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8695242,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Pregnant (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,270642,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000073807274446,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695242,,,train,sda-all,samples/GSE285027/GSM8695242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8695243,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Lactating (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,422058,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017227122381,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695243,,,train,sda-all,samples/GSE285027/GSM8695243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM8695244,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Virgin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,154693,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000128945739634,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695244,,,train,sda-all,samples/GSE285027/GSM8695244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8695245,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Pregnant (day 7),adult,luna,adult,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,290140,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499992892220212,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695245,,,train,sda-all,samples/GSE285027/GSM8695245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM8695246,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Lactating (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,321746,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999976217656013,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695246,,,train,sda-all,samples/GSE285027/GSM8695246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM8695247,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Virgin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,180241,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999914018434444,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695247,,,train,sda-all,samples/GSE285027/GSM8695247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8695248,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Pregnant (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,239458,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000055718288335,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695248,,,train,sda-all,samples/GSE285027/GSM8695248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8695249,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Lactating (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,390141,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948328424534,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695249,,,train,sda-all,samples/GSE285027/GSM8695249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8695250,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Virgin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,252319,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103092783506,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695250,,,train,sda-all,samples/GSE285027/GSM8695250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8695251,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Pregnant (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,362363,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000140035377358,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695251,,,train,sda-all,samples/GSE285027/GSM8695251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM8695252,GSE285027,GSE285027,Growth of the maternal intestine during pregnancy and lactation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Lactating (day 7),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,396158,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948282995449,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695252,,,train,sda-all,samples/GSE285027/GSM8695252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM9461743,GSE285158,GSE285158,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,GFP,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,73790,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999828641930177,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461743,,,train,sda-all,samples/GSE285158/GSM9461743,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9461744,GSE285158,GSE285158,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,GFP,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,53044,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999828375286041,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461744,,,train,sda-all,samples/GSE285158/GSM9461744,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9461745,GSE285158,GSE285158,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66634,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999844797616091,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461745,,,train,sda-all,samples/GSE285158/GSM9461745,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.37, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9461746,GSE285158,GSE285158,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,xenograft,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66479,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999794219864643,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461746,,,train,sda-all,samples/GSE285158/GSM9461746,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind;disease_status,low_confidence_annotation
GSM9461747,GSE285158,GSE285158,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,xenograft,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66278,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999828641930177,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461747,,,train,sda-all,samples/GSE285158/GSM9461747,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.17, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9461748,GSE285158,GSE285158,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,Homo sapiens,9606,human,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61022,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862800695143,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461748,,,train,sda-all,samples/GSE285158/GSM9461748,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.42, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8698703,GSE285226,GSE285226,Deciphering Spatial Transcriptomic Signatures Reveals Insights into Perifascicular Atrophy in Dermatomyositis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Frozen Muscle section,primary tissue,MONDO:0001907,adult dermatomyositis,disease,luna,Adult Dermatomyositis,Adult Dermatomyositis,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1867,36601,counts,pixel,4.41755709153132,platform_constant,True,H&E,4.41755709153132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8698703,,,test,hesrt,samples/GSE285226/GSM8698703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.73}",,
GSM8698704,GSE285226,GSE285226,Deciphering Spatial Transcriptomic Signatures Reveals Insights into Perifascicular Atrophy in Dermatomyositis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Frozen Muscle section,primary tissue,MONDO:0008054,juvenile dermatomyositis,disease,luna,Juvenile Dermatomyositis,Juvenile Dermatomyositis,juvenile,luna,juvenile,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1455,36601,counts,pixel,4.444469026541841,platform_constant,True,H&E,4.444469026541841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8698704,,,test,hesrt,samples/GSE285226/GSM8698704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8699165,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2899,33538,counts,pixel,4.425559461139497,platform_constant,True,H&E,4.425559461139497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699165,,,test,hesrt,samples/GSE285246/GSM8699165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699166,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3642,33538,counts,pixel,4.8754077935766125,platform_constant,True,H&E,4.8754077935766125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699166,,,test,hesrt,samples/GSE285246/GSM8699166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699167,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2160,33538,counts,pixel,4.805966961773025,platform_constant,True,H&E,4.805966961773025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699167,,,test,hesrt,samples/GSE285246/GSM8699167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699168,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1982,33538,counts,pixel,4.8078755095431625,platform_constant,True,H&E,4.8078755095431625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699168,,,test,hesrt,samples/GSE285246/GSM8699168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699169,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1452,33538,counts,pixel,4.807111908562414,platform_constant,True,H&E,4.807111908562414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699169,,,test,hesrt,samples/GSE285246/GSM8699169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699170,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2413,33538,counts,pixel,4.805966961773025,platform_constant,True,H&E,4.805966961773025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699170,,,test,hesrt,samples/GSE285246/GSM8699170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699171,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2386,33538,counts,pixel,4.8078755095431625,platform_constant,True,H&E,4.8078755095431625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699171,,,test,hesrt,samples/GSE285246/GSM8699171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8699172,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2459,33538,counts,pixel,4.806729896343027,platform_constant,True,H&E,4.806729896343027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699172,,,test,hesrt,samples/GSE285246/GSM8699172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699173,GSE285246,GSE285246,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,IPF lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,idiopathic pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2130,33538,counts,pixel,4.806729896343027,platform_constant,True,H&E,4.806729896343027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699173,,,test,hesrt,samples/GSE285246/GSM8699173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8700484,GSE285304,GSE285304,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo E11,whole embryo/organism,,,normal,luna,,m6A-ARTR-DBiT protocol,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,release v3,m6A-ARTR-DBiT,sequencing-based,m6A-ARTR-DBiT,,,spot,1926,15921,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700484,,,train,sda-all,samples/GSE285304/GSM8700484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8700485,GSE285304,GSE285304,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo E11,whole embryo/organism,,,normal,luna,,m6A-ARTR-DBiT protocol,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,release v3,m6A-ARTR-DBiT,sequencing-based,m6A-ARTR-DBiT,,,spot,2004,16527,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700485,,,train,sda-all,samples/GSE285304/GSM8700485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8700486,GSE285304,GSE285304,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,m6A-ARTR-DBiT protocol,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,m6A-ARTR-DBiT,sequencing-based,m6A-ARTR-DBiT,,,spot,2363,15834,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700486,,,train,sda-all,samples/GSE285304/GSM8700486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8700487,GSE285304,GSE285304,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,m6A-ARTR-DBiT protocol,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,m6A-ARTR-DBiT,sequencing-based,m6A-ARTR-DBiT,,,spot,2401,15862,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700487,,,train,sda-all,samples/GSE285304/GSM8700487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8700488,GSE285304,GSE285304,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,m6A-ARTR-DBiT protocol,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,m6A-ARTR-DBiT,sequencing-based,m6A-ARTR-DBiT,,,spot,2500,15178,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700488,,,train,sda-all,samples/GSE285304/GSM8700488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9438232,GSE285304,GSE285304,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0000922,embryo,Embryo E11,whole embryo/organism,,,normal,luna,,DBiT-seq protocol,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,release v3,DBiT-seq,sequencing-based,DBiT-seq,,,spot,1776,17021,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM9438232,,,train,sda-all,samples/GSE285304/GSM9438232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8701050,GSE285341,GSE285341,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,LLC1 cancer tissue in syngeneic mouse model,xenograft,MONDO:0021117;MONDO:0004992,lung neoplasm;cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,198792,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998805884600683,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701050,,,train,sda-all,samples/GSE285341/GSM8701050,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8701051,GSE285341,GSE285341,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,LLC1 cancer tissue in syngeneic mouse model,xenograft,MONDO:0021117;MONDO:0004992,lung neoplasm;cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,397786,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000155193819837,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701051,,,train,sda-all,samples/GSE285341/GSM8701051,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8701052,GSE285341,GSE285341,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,LLC1 cancer tissue in syngeneic mouse model,xenograft,MONDO:0021117;MONDO:0004992,lung neoplasm;cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,342508,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000044341965235,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701052,,,train,sda-all,samples/GSE285341/GSM8701052,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8701053,GSE285341,GSE285341,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,LLC1 cancer tissue in syngeneic mouse model,xenograft,MONDO:0021117;MONDO:0004992,lung neoplasm;cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,217301,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000075165363801,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701053,,,train,sda-all,samples/GSE285341/GSM8701053,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8703563,GSE285505,GSE285505,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colorectal carcinoma,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,Colorectal carcinoma,CMS4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3493,17943,counts,pixel,4.806309831681959,platform_constant,True,H&E,4.806309831681959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703563,,,val,hesrt,samples/GSE285505/GSM8703563,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8703564,GSE285505,GSE285505,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colorectal carcinoma,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,Colorectal carcinoma,CMS4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2473,17943,counts,pixel,4.808396885786738,platform_constant,True,H&E,4.808396885786738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703564,,,val,hesrt,samples/GSE285505/GSM8703564,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8703565,GSE285505,GSE285505,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colorectal carcinoma,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,Colorectal carcinoma,CMS1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3563,17943,counts,pixel,4.806869942373979,platform_constant,True,H&E,4.806869942373979,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703565,,,val,hesrt,samples/GSE285505/GSM8703565,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8703566,GSE285505,GSE285505,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colorectal carcinoma,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,Colorectal carcinoma,CMS2,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3415,17943,counts,pixel,4.806869942373979,platform_constant,True,H&E,4.806869942373979,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703566,,,val,hesrt,samples/GSE285505/GSM8703566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8707234,GSE285715,GSE285715,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder cancer,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4293,18085,counts,pixel,6.594917248478929,platform_constant,True,H&E,6.594917248478929,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707234,,,val,hesrt,samples/GSE285715/GSM8707234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8707235,GSE285715,GSE285715,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder cancer,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3989,18085,counts,pixel,4.766761671783493,platform_constant,True,H&E,4.766761671783493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707235,,,val,hesrt,samples/GSE285715/GSM8707235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8707236,GSE285715,GSE285715,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder cancer,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3344,18085,counts,pixel,4.917109735769261,platform_constant,True,H&E,4.917109735769261,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707236,,,val,hesrt,samples/GSE285715/GSM8707236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8707237,GSE285715,GSE285715,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Normal tissue adjacent to bladder cancer,primary tissue,,,normal,luna,bladder cancer,normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1417,18085,counts,pixel,3.3907290994862356,platform_constant,True,H&E,3.3907290994862356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707237,,,val,hesrt,samples/GSE285715/GSM8707237,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8707238,GSE285715,GSE285715,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Normal tissue adjacent to bladder cancer,primary tissue,,,normal,luna,bladder cancer,normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1811,18085,counts,pixel,7.266297203166238,platform_constant,True,H&E,7.266297203166238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707238,,,val,hesrt,samples/GSE285715/GSM8707238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8707239,GSE285715,GSE285715,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Normal tissue adjacent to bladder cancer,primary tissue,,,normal,luna,bladder cancer,normal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2510,18085,counts,pixel,6.063000394580036,platform_constant,True,H&E,6.063000394580036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707239,,,val,hesrt,samples/GSE285715/GSM8707239,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.96, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8711459,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, postnatal day 0",primary tissue,,,normal,luna,,Non-transgenic (NT),neonatal or infant,luna,neonatal or infant,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,728,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.281017027089828,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711459,,,train,sda-all,samples/GSE285858/GSM8711459,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711460,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, postnatal day 0",primary tissue,,,normal,luna,,Non-transgenic (NT),neonatal or infant,luna,neonatal or infant,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,848,32285,counts,um,1.0,verified,True,fluorescence: red (heuristic),4.280894186631779,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711460,,,train,sda-all,samples/GSE285858/GSM8711460,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711461,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, postnatal day 0",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),neonatal or infant,luna,neonatal or infant,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1049,32285,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),4.277449035981772,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711461,,,train,sda-all,samples/GSE285858/GSM8711461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711462,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, postnatal day 0",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),neonatal or infant,luna,neonatal or infant,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,777,32285,counts,um,1.0,verified,True,fluorescence: red (heuristic),4.315444742850062,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711462,,,train,sda-all,samples/GSE285858/GSM8711462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711463,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 4-week",primary tissue,,,normal,luna,,Non-transgenic (NT),juvenile,luna,juvenile,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2271,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.284126918803069,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711463,,,train,sda-all,samples/GSE285858/GSM8711463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711464,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 4-week",primary tissue,,,normal,luna,,Non-transgenic (NT),juvenile,luna,juvenile,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2543,32285,counts,um,1.0,verified,True,fluorescence: red (heuristic),4.291224181334669,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711464,,,train,sda-all,samples/GSE285858/GSM8711464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711465,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 4-week",primary tissue,,,normal,luna,,Non-transgenic (NT),juvenile,luna,juvenile,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2779,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.27963583115327,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711465,,,train,sda-all,samples/GSE285858/GSM8711465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8711466,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 4-week",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),juvenile,luna,juvenile,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2592,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.28019802908275,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711466,,,train,sda-all,samples/GSE285858/GSM8711466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711467,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 4-week",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),juvenile,luna,juvenile,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2445,32285,counts,um,1.0,verified,True,fluorescence: red (heuristic),4.290741731768981,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711467,,,train,sda-all,samples/GSE285858/GSM8711467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711468,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 4-week",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),juvenile,luna,juvenile,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2723,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.281877391944005,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711468,,,train,sda-all,samples/GSE285858/GSM8711468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711469,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 12-week",primary tissue,,,normal,luna,,Non-transgenic (NT),adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2151,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.28069891643098,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711469,,,train,sda-all,samples/GSE285858/GSM8711469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711470,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 12-week",primary tissue,,,normal,luna,,Non-transgenic (NT),adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2341,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.2839522258158365,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711470,,,train,sda-all,samples/GSE285858/GSM8711470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711471,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 12-week",primary tissue,,,normal,luna,,Non-transgenic (NT),adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2714,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.283403960185836,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711471,,,train,sda-all,samples/GSE285858/GSM8711471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711472,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 12-week",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2184,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.286202554775762,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711472,,,train,sda-all,samples/GSE285858/GSM8711472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8711473,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 12-week",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2073,32285,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.28764120244002,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711473,,,train,sda-all,samples/GSE285858/GSM8711473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711474,GSE285858,GSE285858,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,"Brain, male, 12-week",primary tissue,MONDO:0007739,Huntington disease,disease,luna,,Transgenic (R62),adult,luna,adult,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1915,32285,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.2818580644071815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711474,,,train,sda-all,samples/GSE285858/GSM8711474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714492,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,MONDO:0006702;MONDO:0100169,"chronic inflammatory demyelinating polyradiculoneuropathy;polyneuropathy, inflammatory demyelinating, chronic",disease,luna,CIDP,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12513,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000090336568243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714492,,,val,sda-all,samples/GSE285984/GSM8714492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714493,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,,,disease,luna,CIAP,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16248,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041349652663,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714493,,,val,sda-all,samples/GSE285984/GSM8714493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714494,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,MONDO:0006702;MONDO:0100169,"chronic inflammatory demyelinating polyradiculoneuropathy;polyneuropathy, inflammatory demyelinating, chronic",disease,luna,CIDP,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20286,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051793536167,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714494,,,val,sda-all,samples/GSE285984/GSM8714494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714495,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,,,disease,luna,CIAP,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6411,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000193718359335,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714495,,,val,sda-all,samples/GSE285984/GSM8714495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714496,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,,,normal,luna,CTRL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4784,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997946190182785,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714496,,,val,sda-all,samples/GSE285984/GSM8714496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8714497,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,,,normal,luna,CTRL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9899,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000090336568243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714497,,,val,sda-all,samples/GSE285984/GSM8714497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8714498,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,MONDO:0001824,polyneuropathy,disease,luna,VN,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6858,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206213912566,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714498,,,val,sda-all,samples/GSE285984/GSM8714498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714499,GSE285984,GSE285984,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0015488,sural nerve,sural nerve,primary tissue,MONDO:0001824,polyneuropathy,disease,luna,Vn,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7592,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997807017543855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714499,,,val,sda-all,samples/GSE285984/GSM8714499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8714610,GSE285990,GSE285990,Chemotherapy triggers immune evasion by fostering LEPR+ Kupffer cell differentiation in liver metastases [RNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver metastases,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,,FOLFOX regimen for 5 days,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,57446,37885,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41687606,,GSM8714610,,,train,sda-all,samples/GSE285990/GSM8714610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714611,GSE285990,GSE285990,Chemotherapy triggers immune evasion by fostering LEPR+ Kupffer cell differentiation in liver metastases [RNA-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver metastases,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,,FOLFOX regimen for 15 days,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,51464,32171,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41687606,,GSM8714611,,,train,sda-all,samples/GSE285990/GSM8714611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8714858,GSE286008,GSE286008,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,pancreas,uberon_chain,UBERON:0001264,pancreas,HP-1 pancreatic cancer cell line-derived tumor,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,OAd-Luc,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2556,18296,counts,pixel,4.046779493503515,platform_constant,True,H&E,4.046779493503515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714858,,,train,hesrt,samples/GSE286008/GSM8714858,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 0.64, ""disease_status"": 0.93, ""uberon"": 0.6000000000000001, ""life_stage"": 0.92}",,
GSM8714859,GSE286008,GSE286008,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,pancreas,uberon_chain,UBERON:0001264,pancreas,HP-1 pancreatic cancer cell line-derived tumor,xenograft,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,OAd-IFN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2910,18296,counts,pixel,4.522564505967935,platform_constant,True,H&E,4.522564505967935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714859,,,train,hesrt,samples/GSE286008/GSM8714859,sda-tissue-disease-2.4,"{""organ"": 0.79, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8714860,GSE286008,GSE286008,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,pancreas,uberon_chain,UBERON:0001264,pancreas,HP-1 pancreatic cancer cell line-derived tumor,xenograft,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,OAd-IFN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3106,18296,counts,pixel,4.252350734411144,platform_constant,True,H&E,4.252350734411144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714860,,,train,hesrt,samples/GSE286008/GSM8714860,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.52, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 0.88}",sample_kind,low_confidence_annotation
GSM8714861,GSE286008,GSE286008,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,pancreas,uberon_chain,UBERON:0001264,pancreas,HP-1 pancreatic cancer cell line-derived tumor,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,OAd-IFN,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3722,18296,counts,pixel,4.573555569648775,platform_constant,True,H&E,4.573555569648775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714861,,,train,hesrt,samples/GSE286008/GSM8714861,sda-tissue-disease-2.4,"{""organ"": 0.79, ""sample_kind"": 0.64, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8717006,GSE286051,GSE286051,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidneys,primary tissue,,,normal,luna,,,aged,age rule: age with unit,adult,92 weeks,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,397721,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999129071590315,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717006,,,train,sda-all,samples/GSE286051/GSM8717006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8717007,GSE286051,GSE286051,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidneys,primary tissue,,,normal,luna,,,aged,age rule: age with unit,adult,92 weeks,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,421140,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103391232423,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717007,,,train,sda-all,samples/GSE286051/GSM8717007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8717008,GSE286051,GSE286051,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidneys,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,336623,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000130976672366,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717008,,,train,sda-all,samples/GSE286051/GSM8717008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8717009,GSE286051,GSE286051,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,kidneys,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,12 weeks,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,320131,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499989054290718,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717009,,,train,sda-all,samples/GSE286051/GSM8717009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8717512,GSE286085,GSE286085,Fibroblast orchestration of inflammaging via NF-kB activation (Xenium Analysis),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,perturbation,luna,,,aged,luna,aged,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,197597,429,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999993908975733,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41256682,,GSM8717512,,,train,sda-all,samples/GSE286085/GSM8717512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8720409,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,15786,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720409,,,test,sda-all,samples/GSE286184/GSM8720409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720410,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,17935,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720410,,,test,sda-all,samples/GSE286184/GSM8720410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720411,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,,DKD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,34621,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720411,,,test,sda-all,samples/GSE286184/GSM8720411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720412,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,,DKD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,13519,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720412,,,test,sda-all,samples/GSE286184/GSM8720412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720413,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,,DKD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,20472,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720413,,,test,sda-all,samples/GSE286184/GSM8720413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720414,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,52225,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720414,,,test,sda-all,samples/GSE286184/GSM8720414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720415,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,,DKD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,27155,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720415,,,test,sda-all,samples/GSE286184/GSM8720415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720416,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,,DKD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,13907,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720416,,,test,sda-all,samples/GSE286184/GSM8720416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8720417,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016,diabetic kidney disease,disease,luna,,DKD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,61683,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720417,,,test,sda-all,samples/GSE286184/GSM8720417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8720420,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,IgAN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,72994,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720420,,,test,sda-all,samples/GSE286184/GSM8720420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720421,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,IgAN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,44801,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720421,,,test,sda-all,samples/GSE286184/GSM8720421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720422,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MCD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,61589,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720422,,,test,sda-all,samples/GSE286184/GSM8720422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720423,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MCD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,61598,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720423,,,test,sda-all,samples/GSE286184/GSM8720423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720424,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MCD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,20202,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720424,,,test,sda-all,samples/GSE286184/GSM8720424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720425,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MCD,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,52176,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720425,,,test,sda-all,samples/GSE286184/GSM8720425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720426,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,11798,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720426,,,test,sda-all,samples/GSE286184/GSM8720426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720427,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,42263,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720427,,,test,sda-all,samples/GSE286184/GSM8720427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720428,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,19967,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720428,,,test,sda-all,samples/GSE286184/GSM8720428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720429,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,49095,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720429,,,test,sda-all,samples/GSE286184/GSM8720429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720430,GSE286184,GSE286184,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,disease,luna,,MN,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,20340,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720430,,,test,sda-all,samples/GSE286184/GSM8720430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9549467,GSE286215,GSE286215,A temporal map of B cell diversification mechanisms in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Plasmodium infection,adult,age rule: age with unit,juvenile,6-12 weeks,female,extracted field,female,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,270939,26383,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42297974,,GSM9549467,,,test,sda-all,samples/GSE286215/GSM9549467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM9549468,GSE286215,GSE286215,A temporal map of B cell diversification mechanisms in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Plasmodium infection,adult,age rule: age with unit,juvenile,6-12 weeks,female,extracted field,female,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,390435,27477,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42297974,,GSM9549468,,,test,sda-all,samples/GSE286215/GSM9549468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM8721365,GSE286227,GSE286227,Spatial transcriptomic profiling of the lung tissues from a patient with recurrent anti-synthetase syndrome associated interstitial lung disease after bilateral lung transplantation and one untreated patient,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tissue,primary tissue,MONDO:0015925;MONDO:0002254,interstitial lung disease;syndromic disease,disease,luna,anti-synthetase syndrome-associated interstitial lung disease,untreated ASS-ILD (Non-LTx),not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,317761,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8721365,,,train,hesrt,samples/GSE286227/GSM8721365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8721366,GSE286227,GSE286227,Spatial transcriptomic profiling of the lung tissues from a patient with recurrent anti-synthetase syndrome associated interstitial lung disease after bilateral lung transplantation and one untreated patient,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung tissue,primary tissue,MONDO:0015925;MONDO:0002254,interstitial lung disease;syndromic disease,disease,luna,anti-synthetase syndrome-associated interstitial lung disease,bilateral lung transplantation (LTx) for ASS-ILD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,133878,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8721366,,,train,hesrt,samples/GSE286227/GSM8721366,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM8721640,GSE286250,GSE286250,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain organoid,organoid,,,perturbation,luna,,Vitamin A (3 months),not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,552,21639,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41255712,,GSM8721640,,,train,sda-all,samples/GSE286250/GSM8721640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8721641,GSE286250,GSE286250,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain organoid,organoid,,,perturbation,luna,,ATRA (3 months),not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,593,20881,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41255712,,GSM8721641,,,train,sda-all,samples/GSE286250/GSM8721641,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM8721642,GSE286250,GSE286250,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain organoid,organoid,,,perturbation,luna,,BMS753 (3 months),not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,469,20987,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41255712,,GSM8721642,,,train,sda-all,samples/GSE286250/GSM8721642,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8721643,GSE286250,GSE286250,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain organoid,organoid,,,perturbation,luna,,BMS961+BMS641 (3 months),not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial transcriptomics,,,spot,365,20800,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,41255712,,GSM8721643,,,train,sda-all,samples/GSE286250/GSM8721643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8721777,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0001114,right lobe of liver,,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,7-12,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.6.0.8,cell,76708,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.50001315492746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721777,,,train,sda-all,samples/GSE286254/GSM8721777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM8721778,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0000353,parenchyma,,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,7-12,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.6.0.8,cell,77666,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999827669400976,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721778,,,train,sda-all,samples/GSE286254/GSM8721778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8721779,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,,primary tissue,MONDO:0006499,hamartoma,disease,luna,,,adult,age rule: bare number read as years,adult,38,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.5.0.3,cell,49666,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499993548720066,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721779,,,train,sda-all,samples/GSE286254/GSM8721779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8721780,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0000353,parenchyma,,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,38,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.5.0.3,cell,42255,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998553121124434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721780,,,train,sda-all,samples/GSE286254/GSM8721780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.58, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8721781,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0000353,parenchyma,,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,38,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.5.0.3,cell,55698,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000047006618532,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721781,,,train,sda-all,samples/GSE286254/GSM8721781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.67, ""life_stage"": 0.84}",,
GSM8721782,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0000353,parenchyma,,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.7.1.0,cell,142659,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000018268621815,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721782,,,train,sda-all,samples/GSE286254/GSM8721782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8721783,GSE286254,GSE286254,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0000353,parenchyma,,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_100g,xenium-1.6.0.8,cell,125967,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000143266475644,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721783,,,train,sda-all,samples/GSE286254/GSM8721783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.42, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8727282,GSE286413,GSE286413,Spatial multi-omics defines a shared glioblastoma infiltrative signature at the resection margin [10x Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002808,left temporal lobe,Brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,Core-to-Margin,aged,age rule: bare number read as years,aged,79,female,extracted field,female,GSE286413:G740,G740,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4322,18085,counts,pixel,4.657464328326223,platform_constant,True,H&E,4.657464328326223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40759029,,GSM8727282,,,val,hesrt,samples/GSE286413/GSM8727282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8727283,GSE286413,GSE286413,Spatial multi-omics defines a shared glioblastoma infiltrative signature at the resection margin [10x Spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002809,right temporal lobe,Brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,Core-to-Margin,adult,age rule: bare number read as years,adult,35,male,extracted field,male,GSE286413:G4,G4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3626,18085,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40759029,,GSM8727283,,,val,hesrt,samples/GSE286413/GSM8727283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8727829,GSE286452,GSE286452,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Node,primary tissue,,,normal,luna,,10uL PBS injection in the left hind and tissue collection 3dpi,adult,age rule: age with unit,adult,3 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,78205,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727829,,,train,sda-all,samples/GSE286452/GSM8727829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727830,GSE286452,GSE286452,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Node,primary tissue,MONDO:0002595,vaccinia,disease,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 3dpi,adult,age rule: age with unit,adult,3 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,78462,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727830,,,train,sda-all,samples/GSE286452/GSM8727830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727831,GSE286452,GSE286452,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Node,primary tissue,MONDO:0002595,vaccinia,disease,mondo_predicate (Luna: perturbation),,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 7dpi,adult,age rule: age with unit,adult,3 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,77245,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727831,,,train,sda-all,samples/GSE286452/GSM8727831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727832,GSE286452,GSE286452,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Node,primary tissue,MONDO:0002595,vaccinia,disease,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 10dpi,adult,age rule: age with unit,adult,3 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,78558,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727832,,,train,sda-all,samples/GSE286452/GSM8727832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8727833,GSE286452,GSE286452,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Node,primary tissue,MONDO:0002595,vaccinia,disease,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 14dpi,adult,age rule: age with unit,adult,3 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,78224,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727833,,,train,sda-all,samples/GSE286452/GSM8727833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727834,GSE286452,GSE286452,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0001543,popliteal lymph node,Popliteal Lymph Node,primary tissue,MONDO:0002595,vaccinia,disease,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 21dpi,adult,age rule: age with unit,adult,3 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,79423,31053,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727834,,,train,sda-all,samples/GSE286452/GSM8727834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8728261,GSE286477,GSE286477,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,pretreatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2273,18087,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-c61e278c66dd,library_alias,GSM8728262;GSM8728263,train,hesrt,samples/GSE286477/GSM8728261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM8728264,GSE286477,GSE286477,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,posttreatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4234,18087,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-dfb115bf5372,library_alias,GSM8728265;GSM8728266,train,hesrt,samples/GSE286477/GSM8728264,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8728267,GSE286477,GSE286477,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,pretreatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2166,18087,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-575184a33e51,library_alias,GSM8728268;GSM8728269,train,hesrt,samples/GSE286477/GSM8728267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8728270,GSE286477,GSE286477,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,posttreatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3128,18087,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-e3ad5a05c5fe,library_alias,GSM8728271;GSM8728272,train,hesrt,samples/GSE286477/GSM8728270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8728273,GSE286477,GSE286477,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,pretreatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1858,18087,counts,pixel,4.740454631399772,platform_constant,True,H&E,4.740454631399772,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-a625342a3f13,library_alias,GSM8728274;GSM8728275,train,hesrt,samples/GSE286477/GSM8728273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8728276,GSE286477,GSE286477,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,glioblastoma,posttreatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,470,18087,counts,pixel,4.740454631399772,platform_constant,True,H&E,4.740454631399772,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-134ac3fea6be,library_alias,GSM8728277;GSM8728278,train,hesrt,samples/GSE286477/GSM8728276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM8734558,GSE286935,GSE286935,Analysis of B cell neighborhoods via single cell spatial transcriptomics in head and neck cancer patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0006562,pharynx,Pharynx,tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CoSMX,,,cell,103159,979,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39970232,,GSM8734558,,,train,sda-all,samples/GSE286935/GSM8734558,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8734926,GSE286964,GSE286964,Somatic mutations distinguish melanocyte subpopulations in human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Non-cancerous skin,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,63 years,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,148741,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998782151208104,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8734926,,,train,sda-all,samples/GSE286964/GSM8734926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8734927,GSE286964,GSE286964,Somatic mutations distinguish melanocyte subpopulations in human skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Non-cancerous skin,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,63 years,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,145489,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077475337017,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8734927,,,train,sda-all,samples/GSE286964/GSM8734927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8741261,GSE287202,GSE287202,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (coronal section),primary tissue,,,normal,luna,,aged 28 months,aged,age rule: age with unit,aged,28 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3680,19465,counts,pixel,7.0224174557521515,platform_constant,True,H&E,7.0224174557521515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741261,,,test,hesrt,samples/GSE287202/GSM8741261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8741262,GSE287202,GSE287202,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (coronal section),primary tissue,,,normal,luna,,aged 28 months,aged,age rule: age with unit,aged,28 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3570,19465,counts,pixel,6.951251719262127,platform_constant,True,H&E,6.951251719262127,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741262,,,test,hesrt,samples/GSE287202/GSM8741262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8741263,GSE287202,GSE287202,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (coronal section),primary tissue,,,normal,luna,,adult 12-15 weeks,adult,age rule: age with unit,adult,12–15 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2919,19465,counts,pixel,4.243157726241051,platform_constant,True,H&E,4.243157726241051,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741263,,,test,hesrt,samples/GSE287202/GSM8741263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.93}",,
GSM8741264,GSE287202,GSE287202,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (coronal section),primary tissue,,,normal,luna,,adult 12-15 weeks,adult,age rule: age with unit,adult,12–15 weeks,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3261,19465,counts,pixel,4.243157726241051,platform_constant,True,H&E,4.243157726241051,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741264,,,test,hesrt,samples/GSE287202/GSM8741264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8742917,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,normal,luna,,control,adult,age rule: bare number read as years,not stated,25,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,751,36601,counts,pixel,0.9345794392523364,platform_constant,True,H&E,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742917,,,train,hesrt,samples/GSE287278/GSM8742917,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM8742918,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,normal,luna,,control,adult,age rule: bare number read as years,not stated,24,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,820,36601,counts,pixel,0.9345386270319954,platform_constant,True,H&E,0.9345386270319954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742918,,,train,hesrt,samples/GSE287278/GSM8742918,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8742919,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,normal,luna,,control,adult,age rule: bare number read as years,not stated,32,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1805,36601,counts,pixel,0.9345794392523364,platform_constant,True,H&E,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742919,,,train,hesrt,samples/GSE287278/GSM8742919,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM8742920,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,normal,luna,,control,adult,age rule: bare number read as years,not stated,31,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2018,36601,counts,pixel,0.9345386270319954,platform_constant,True,H&E,0.9345386270319954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742920,,,train,hesrt,samples/GSE287278/GSM8742920,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8742921,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,disease,luna,repeated implantation failure,repeated implantation failure,adult,age rule: bare number read as years,adult,31,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1334,36601,counts,pixel,0.9345794392523364,platform_constant,True,H&E,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742921,,,train,hesrt,samples/GSE287278/GSM8742921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.73}",,
GSM8742922,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,disease,luna,repeated implantation failure,repeated implantation failure,adult,age rule: bare number read as years,not stated,33,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1367,36601,counts,pixel,0.9345794392523364,platform_constant,True,H&E,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742922,,,train,hesrt,samples/GSE287278/GSM8742922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8742923,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,disease,luna,repeated implantation failure,repeated implantation failure,adult,age rule: bare number read as years,not stated,25,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,914,36601,counts,pixel,0.9345794392523364,platform_constant,True,H&E,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742923,,,train,hesrt,samples/GSE287278/GSM8742923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM8742924,GSE287278,GSE287278,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001295,endometrium,uterine endometrium,primary tissue,,,disease,luna,repeated implantation failure,repeated implantation failure,adult,age rule: bare number read as years,not stated,29,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1154,36601,counts,pixel,0.9345794392523364,platform_constant,True,H&E,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742924,,,train,hesrt,samples/GSE287278/GSM8742924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8745172,GSE287384,GSE287384,Gas6-Axl signaling drives oral regenerative wound repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,Unwounded,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,671,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.787267816752401,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745172,,,train,sda-all,samples/GSE287384/GSM8745172,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8745173,GSE287384,GSE287384,Gas6-Axl signaling drives oral regenerative wound repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral Mucosa,primary tissue,,,normal,luna,,Unwounded,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1288,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.348641901134696,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745173,,,train,sda-all,samples/GSE287384/GSM8745173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8745174,GSE287384,GSE287384,Gas6-Axl signaling drives oral regenerative wound repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,POD4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1141,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.784592540135621,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745174,,,train,sda-all,samples/GSE287384/GSM8745174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8745175,GSE287384,GSE287384,Gas6-Axl signaling drives oral regenerative wound repair,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0003729,mouth mucosa,Oral Mucosa,primary tissue,,,perturbation,luna,,POD4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,430,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.785507439696275,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745175,,,train,sda-all,samples/GSE287384/GSM8745175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8746067,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3124,37082,counts,pixel,15.635177205572653,platform_constant,True,H&E,15.635177205572653,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746067,,,test,hesrt,samples/GSE287459/GSM8746067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746068,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3153,37082,counts,pixel,10.727272564218113,platform_constant,True,H&E,10.727272564218113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746068,,,test,hesrt,samples/GSE287459/GSM8746068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746069,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3813,37082,counts,pixel,9.775140255181535,platform_constant,True,H&E,9.775140255181535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746069,,,test,hesrt,samples/GSE287459/GSM8746069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746070,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4007,37082,counts,pixel,11.614647182315492,platform_constant,True,H&E,11.614647182315492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746070,,,test,hesrt,samples/GSE287459/GSM8746070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8746071,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2421,37082,counts,pixel,15.061177085665513,platform_constant,True,H&E,15.061177085665513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746071,,,test,hesrt,samples/GSE287459/GSM8746071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746072,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2365,37082,counts,pixel,10.320081769890297,platform_constant,True,H&E,10.320081769890297,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746072,,,test,hesrt,samples/GSE287459/GSM8746072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746073,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4743,37082,counts,pixel,9.554020222913394,platform_constant,True,H&E,9.554020222913394,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746073,,,test,hesrt,samples/GSE287459/GSM8746073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746074,GSE287459,GSE287459,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,pulmonary LAM,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,lymphangioleiomyomatosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3811,37082,counts,pixel,11.73459613734569,platform_constant,True,H&E,11.73459613734569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746074,,,test,hesrt,samples/GSE287459/GSM8746074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746298,GSE287472,GSE287472,LUAD spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,LUAD,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,64420,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42358378,,GSM8746298,,,train,sda-all,samples/GSE287472/GSM8746298,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746576,GSE287499,GSE287499,Spatial transcriptomics of Slc16a1-Col2a1CreERT2 mouse spinal motion segments reveals compartment-distinct differences in the intervertebral disc,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001066,intervertebral disk,spinal motion segment,primary tissue,,,normal,luna,,CTR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,140810,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.775132370875076,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42236482,,GSM8746576,,,train,sda-all,samples/GSE287499/GSM8746576,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8746577,GSE287499,GSE287499,Spatial transcriptomics of Slc16a1-Col2a1CreERT2 mouse spinal motion segments reveals compartment-distinct differences in the intervertebral disc,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001066,intervertebral disk,spinal motion segment,primary tissue,,,perturbation,luna,,cKO,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,141538,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.4359579495765873,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42236482,,GSM8746577,,,train,sda-all,samples/GSE287499/GSM8746577,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8756693,GSE287979,GSE287979,Systematic inference of super-resolution cell spatial profiles from histology images,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Pre-cancerours gastric,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2182,18085,counts,pixel,6.777358882473598,platform_constant,True,H&E,6.777358882473598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39984438,,GSM8756693,,,train,hesrt,samples/GSE287979/GSM8756693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8760701,GSE288178,GSE288178,Spatially resolving chromatin landscapes in formalin-fixed paraffin-embedded tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,human lymph node DLBCL,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,release v3,Patho-DBiT,sequencing-based,Patho-DBiT,,,spot,2500,31525,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42067542,,GSM8760701,,,train,sda-all,samples/GSE288178/GSM8760701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8761144,GSE288200,GSE288200,A rewired myeloid niche in spleen establishes stress erythropoiesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,perturbation,luna,,IL18m-day5,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,1058,19479,counts,um,1.0,verified,True,H&E-like (heuristic),4.80136417387274,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8761144,,,train,sda-all,samples/GSE288200/GSM8761144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8761646,GSE288235,GSE288235,"Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [Spatial transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,esophagus,luna,UBERON:0001043,esophagus,Barrett's Esophagus,primary tissue,MONDO:0013662,Barrett esophagus,disease,luna,Barrett's Esophagus,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,seqFISH,sequencing-based,other,,,cell,4271,106,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36747708;41360789,,GSM8761646,,,test,sda-all,samples/GSE288235/GSM8761646,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8761647,GSE288235,GSE288235,"Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [Spatial transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,esophagus,luna,UBERON:0001043,esophagus,Barrett's Esophagus,primary tissue,MONDO:0013662,Barrett esophagus,disease,luna,Barrett's Esophagus,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,seqFISH,sequencing-based,other,,,cell,4314,106,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36747708;41360789,,GSM8761647,,,test,sda-all,samples/GSE288235/GSM8761647,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8761648,GSE288235,GSE288235,"Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [Spatial transcriptomics]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,esophagus,luna,UBERON:0001043,esophagus,Barrett's Esophagus,primary tissue,MONDO:0013662,Barrett esophagus,disease,luna,Barrett's Esophagus,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,seqFISH,sequencing-based,other,,,cell,4297,106,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,36747708;41360789,,GSM8761648,,,test,sda-all,samples/GSE288235/GSM8761648,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8766366,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7471,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766366,,,train,sda-all,samples/GSE288365/GSM8766366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8766367,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7890,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766367,,,train,sda-all,samples/GSE288365/GSM8766367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766368,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8196,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766368,,,train,sda-all,samples/GSE288365/GSM8766368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766369,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9825,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766369,,,train,sda-all,samples/GSE288365/GSM8766369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766370,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7359,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766370,,,train,sda-all,samples/GSE288365/GSM8766370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766371,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9872,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766371,,,train,sda-all,samples/GSE288365/GSM8766371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766372,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6393,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766372,,,train,sda-all,samples/GSE288365/GSM8766372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8766373,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11634,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766373,,,train,sda-all,samples/GSE288365/GSM8766373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766374,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9232,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766374,,,train,sda-all,samples/GSE288365/GSM8766374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766375,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8272,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766375,,,train,sda-all,samples/GSE288365/GSM8766375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766376,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6956,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766376,,,train,sda-all,samples/GSE288365/GSM8766376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766377,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3642,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766377,,,train,sda-all,samples/GSE288365/GSM8766377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766378,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7568,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766378,,,train,sda-all,samples/GSE288365/GSM8766378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766379,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8409,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766379,,,train,sda-all,samples/GSE288365/GSM8766379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766380,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0024257,amyotrophic lateral sclerosis;hereditary motor neuron disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6977,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766380,,,train,sda-all,samples/GSE288365/GSM8766380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766381,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8853,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766381,,,train,sda-all,samples/GSE288365/GSM8766381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8766382,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1243,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766382,,,train,sda-all,samples/GSE288365/GSM8766382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766383,GSE288365,GSE288365,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002726,cervical spinal cord,Cervical spinal cord,primary tissue,MONDO:0004976;MONDO:0018155,amyotrophic lateral sclerosis;lateral sclerosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7583,18120,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42135512,,GSM8766383,,,train,sda-all,samples/GSE288365/GSM8766383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8768679,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0003688,omentum,Omentum,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IIIC,adult,age rule: bare number read as years,adult,60,unknown,not stated,,GSE288483:Patient1,Patient1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1534,17943,counts,pixel,4.370483230499745,platform_constant,True,H&E,4.370483230499745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768679,,,train,hesrt,samples/GSE288483/GSM8768679,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768680,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0003889,fallopian tube,Fallopian tube,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IVB,aged,age rule: bare number read as years,aged,68,unknown,not stated,,GSE288483:Patient2,Patient2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1131,17943,counts,pixel,4.370101910188587,platform_constant,True,H&E,4.370101910188587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768680,,,train,hesrt,samples/GSE288483/GSM8768680,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8768681,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IVA,adult,age rule: bare number read as years,adult,49,unknown,not stated,,GSE288483:Patient3,Patient3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2002,17943,counts,pixel,4.370101910188565,platform_constant,True,H&E,4.370101910188565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768681,,,train,hesrt,samples/GSE288483/GSM8768681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8768682,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal stump,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IIIB,adult,age rule: bare number read as years,adult,56,unknown,not stated,,GSE288483:Patient4,Patient4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1393,17943,counts,pixel,4.370101910188565,platform_constant,True,H&E,4.370101910188565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768682,,,train,hesrt,samples/GSE288483/GSM8768682,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8768683,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Peritoneum,metastasis,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IIIC,aged,age rule: bare number read as years,aged,77,unknown,not stated,,GSE288483:Patient5,Patient5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1833,17943,counts,pixel,4.8233187092773155,platform_constant,True,H&E,4.8233187092773155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768683,,,train,hesrt,samples/GSE288483/GSM8768683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768684,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IIIC,adult,age rule: bare number read as years,adult,38,unknown,not stated,,GSE288483:Patient6,Patient6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2026,17943,counts,pixel,4.822934330802071,platform_constant,True,H&E,4.822934330802071,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768684,,,train,hesrt,samples/GSE288483/GSM8768684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768685,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IIIC,adult,age rule: bare number read as years,adult,56,unknown,not stated,,GSE288483:Patient7,Patient7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2119,17943,counts,pixel,4.822934330802071,platform_constant,True,H&E,4.822934330802071,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768685,,,train,hesrt,samples/GSE288483/GSM8768685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768686,GSE288483,GSE288483,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,high-grade serous ovarian carcinoma,Stage IVB,adult,age rule: bare number read as years,adult,53,unknown,not stated,,GSE288483:Patient8,Patient8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3284,17943,counts,pixel,4.7962931398204285,platform_constant,True,H&E,4.7962931398204285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768686,,,train,hesrt,samples/GSE288483/GSM8768686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8770189,GSE288576,GSE288576,Effect of Pdk4 smooth muscle cell-specific knockout on atherosclerosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,blood vessel,luna,UBERON:0000947,aorta,aorta,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,both WT (right) & KO (left) located in the same section,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,40583,20779,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8770189,,,train,sda-all,samples/GSE288576/GSM8770189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8770954,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,37082,counts,pixel,0.5025125628140703,platform_constant,True,H&E,0.5025125628140703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770954,,,val,hesrt,samples/GSE288607/GSM8770954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770955,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,37082,counts,pixel,5.336665245732363,platform_constant,True,H&E,5.336665245732363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770955,,,val,hesrt,samples/GSE288607/GSM8770955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770956,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4443,37082,counts,pixel,4.549987889181838,platform_constant,True,H&E,4.549987889181838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770956,,,val,hesrt,samples/GSE288607/GSM8770956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8770957,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3923,37082,counts,pixel,4.266666754047988,platform_constant,True,H&E,4.266666754047988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770957,,,val,hesrt,samples/GSE288607/GSM8770957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770958,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3332,37082,counts,pixel,4.117466871137884,platform_constant,True,H&E,4.117466871137884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770958,,,val,hesrt,samples/GSE288607/GSM8770958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770959,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2285,37082,counts,pixel,1.1903918403013953,platform_constant,True,H&E,1.1903918403013953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770959,,,val,hesrt,samples/GSE288607/GSM8770959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770960,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,37082,counts,pixel,0.5473313553908552,platform_constant,True,H&E,0.5473313553908552,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM8770960,,,val,hesrt,samples/GSE288607/GSM8770960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770961,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3043,37082,counts,pixel,0.502487185955009,platform_constant,True,H&E,0.502487185955009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770961,,,val,hesrt,samples/GSE288607/GSM8770961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770962,GSE288607,GSE288607,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0001708,pulmonary sarcoidosis,disease,luna,sarcoidosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4112,37082,counts,pixel,0.5024554702869775,platform_constant,True,H&E,0.5024554702869775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770962,,,val,hesrt,samples/GSE288607/GSM8770962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8772705,GSE288663,GSE288663,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0002378,muscle of abdomen,Lower abdominal muscle,primary tissue,,,normal,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7797,5060,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979353773098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772705,,,val,sda-all,samples/GSE288663/GSM8772705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772706,GSE288663,GSE288663,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0002378,muscle of abdomen,Lower abdominal muscle,primary tissue,,,normal,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6240,4956,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999673853336995,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772706,,,val,sda-all,samples/GSE288663/GSM8772706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772707,GSE288663,GSE288663,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0002378,muscle of abdomen,Lower abdominal muscle,primary tissue,,,perturbation,luna,,E2+P4,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5055,4892,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000061708079644,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772707,,,val,sda-all,samples/GSE288663/GSM8772707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.77, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772708,GSE288663,GSE288663,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0002378,muscle of abdomen,Lower abdominal muscle,primary tissue,,,perturbation,luna,,E2+P4,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8609,5101,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000235682300259,VERIFIED,ABSENT,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40504614,,GSM8772708,,,val,sda-all,samples/GSE288663/GSM8772708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772709,GSE288663,GSE288663,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0002378,muscle of abdomen,Lower abdominal muscle,primary tissue,,,perturbation,luna,,E2+P4+RU486,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6188,4984,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000185154707044,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772709,,,val,sda-all,samples/GSE288663/GSM8772709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM8772710,GSE288663,GSE288663,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skeletal muscle,luna,UBERON:0002378,muscle of abdomen,Lower abdominal muscle,primary tissue,,,perturbation,luna,,E2+P4+RU486,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5076,4749,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997435897435893,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772710,,,val,sda-all,samples/GSE288663/GSM8772710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8774701,GSE288758,GSE288758,Spatial dynamics of the tumor microenvironment associated with emerging resistance to targeted therapy in EGFR-mutated non–small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,non-small cell lung cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,67850,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM8774701,,,train,hesrt,samples/GSE288758/GSM8774701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8774702,GSE288758,GSE288758,Spatial dynamics of the tumor microenvironment associated with emerging resistance to targeted therapy in EGFR-mutated non–small cell lung cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,non-small cell lung cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,39313,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM8774702,,,train,hesrt,samples/GSE288758/GSM8774702,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8778056,GSE288888,GSE288888,"Spatial Transcriptomics, Histopathology, and Magnetic Resonance Subfield Segmentation of Hippocampal Sclerosis Compared to Normal Hippocampus: A Proof-of-Concept Study",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus on autopsy,primary tissue,,,normal,luna,,Healthy human control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1518,18085,counts,pixel,4.273846181198778,platform_constant,True,H&E,4.273846181198778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8778056,,,train,hesrt,samples/GSE288888/GSM8778056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8778057,GSE288888,GSE288888,"Spatial Transcriptomics, Histopathology, and Magnetic Resonance Subfield Segmentation of Hippocampal Sclerosis Compared to Normal Hippocampus: A Proof-of-Concept Study",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus on autopsy,primary tissue,MONDO:0005115,temporal lobe epilepsy,disease,luna,Hippocampal sclerosis,Drug Resistant Mesial Temporal Lobe Epilepsy (MTLE) with Hippocampal Sclerosis (HS),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2710,17943,counts,pixel,4.270792083265175,platform_constant,True,H&E,4.270792083265175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8778057,,,train,hesrt,samples/GSE288888/GSM8778057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8780608,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,contol,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,119,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780608,,,train,sda-all,samples/GSE289001/GSM8780608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8780609,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,contol,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5159,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780609,,,train,sda-all,samples/GSE289001/GSM8780609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8780610,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,contol,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5686,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780610,,,train,sda-all,samples/GSE289001/GSM8780610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM8780611,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,contol,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4833,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780611,,,train,sda-all,samples/GSE289001/GSM8780611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8780612,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5517,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780612,,,train,sda-all,samples/GSE289001/GSM8780612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8780613,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8675,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780613,,,train,sda-all,samples/GSE289001/GSM8780613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM8780614,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10206,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780614,,,train,sda-all,samples/GSE289001/GSM8780614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8780615,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5485,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780615,,,train,sda-all,samples/GSE289001/GSM8780615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8780616,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6689,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780616,,,train,sda-all,samples/GSE289001/GSM8780616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8780617,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8275,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780617,,,train,sda-all,samples/GSE289001/GSM8780617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM8780618,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8313,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780618,,,train,sda-all,samples/GSE289001/GSM8780618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8780619,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11039,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780619,,,train,sda-all,samples/GSE289001/GSM8780619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM8780620,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7472,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780620,,,train,sda-all,samples/GSE289001/GSM8780620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM8780621,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,HDT tumor,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9254,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780621,,,train,sda-all,samples/GSE289001/GSM8780621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8780622,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,HDT tumor,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8305,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780622,,,train,sda-all,samples/GSE289001/GSM8780622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8780623,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0005070,DICER1-related tumor predisposition;neoplasm,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12865,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780623,,,train,sda-all,samples/GSE289001/GSM8780623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8780624,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14708,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780624,,,train,sda-all,samples/GSE289001/GSM8780624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM8780625,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6949,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780625,,,train,sda-all,samples/GSE289001/GSM8780625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8780626,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9865,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780626,,,train,sda-all,samples/GSE289001/GSM8780626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM8780627,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10663,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780627,,,train,sda-all,samples/GSE289001/GSM8780627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8780629,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8896,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780629,,,train,sda-all,samples/GSE289001/GSM8780629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8780630,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14517,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780630,,,train,sda-all,samples/GSE289001/GSM8780630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.78}",,
GSM8780631,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,adult,luna,adult,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11173,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780631,,,train,sda-all,samples/GSE289001/GSM8780631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8780632,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4025,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780632,,,train,sda-all,samples/GSE289001/GSM8780632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM8780633,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11253,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780633,,,train,sda-all,samples/GSE289001/GSM8780633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8780634,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15646,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780634,,,train,sda-all,samples/GSE289001/GSM8780634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM8780635,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20313,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780635,,,train,sda-all,samples/GSE289001/GSM8780635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM8780636,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9536,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780636,,,train,sda-all,samples/GSE289001/GSM8780636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8780637,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14478,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780637,,,train,sda-all,samples/GSE289001/GSM8780637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.63}",,
GSM8780638,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Renal tumor,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,HDT tumor,not stated,luna,not stated,,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,3300,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM8780638,,,train,sda-all,samples/GSE289001/GSM8780638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM9327877,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,6647,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327877,,,train,sda-all,samples/GSE289001/GSM9327877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327878,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9557,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327878,,,train,sda-all,samples/GSE289001/GSM9327878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9327879,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,7764,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327879,,,train,sda-all,samples/GSE289001/GSM9327879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM9327880,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8597,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327880,,,train,sda-all,samples/GSE289001/GSM9327880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9327881,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9687,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327881,,,train,sda-all,samples/GSE289001/GSM9327881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9327882,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9468,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327882,,,train,sda-all,samples/GSE289001/GSM9327882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9327883,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,6940,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327883,,,train,sda-all,samples/GSE289001/GSM9327883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9327885,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8487,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327885,,,train,sda-all,samples/GSE289001/GSM9327885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9327886,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9290,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327886,,,train,sda-all,samples/GSE289001/GSM9327886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327887,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,6563,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327887,,,train,sda-all,samples/GSE289001/GSM9327887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9327888,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8063,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327888,,,train,sda-all,samples/GSE289001/GSM9327888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9327889,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9083,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327889,,,train,sda-all,samples/GSE289001/GSM9327889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9327890,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,4266,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327890,,,train,sda-all,samples/GSE289001/GSM9327890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9327891,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10366,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327891,,,train,sda-all,samples/GSE289001/GSM9327891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327892,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,5654,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327892,,,train,sda-all,samples/GSE289001/GSM9327892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9327893,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10175,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327893,,,train,sda-all,samples/GSE289001/GSM9327893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9327894,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,7897,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327894,,,train,sda-all,samples/GSE289001/GSM9327894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9327895,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,7614,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327895,,,train,sda-all,samples/GSE289001/GSM9327895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9327896,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate,,control,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,186042,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327896,,,train,sda-all,samples/GSE289001/GSM9327896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9327897,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,perturbation,luna,,control,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,331230,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327897,,,train,sda-all,samples/GSE289001/GSM9327897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM9327898,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10839,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327898,,,train,sda-all,samples/GSE289001/GSM9327898,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9327899,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,15589,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327899,,,train,sda-all,samples/GSE289001/GSM9327899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.62}",,
GSM9327900,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,17052,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327900,,,train,sda-all,samples/GSE289001/GSM9327900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM9327901,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9922,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327901,,,train,sda-all,samples/GSE289001/GSM9327901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM9327902,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,11013,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327902,,,train,sda-all,samples/GSE289001/GSM9327902,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM9327903,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9292,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327903,,,train,sda-all,samples/GSE289001/GSM9327903,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9327904,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,15942,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327904,,,train,sda-all,samples/GSE289001/GSM9327904,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9327905,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0100216;MONDO:0005089,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,disease,luna,,Dicer1 mutant,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,16761,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327905,,,train,sda-all,samples/GSE289001/GSM9327905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.85}",,
GSM9327906,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,adult,luna,adult,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,15449,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327906,,,train,sda-all,samples/GSE289001/GSM9327906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9327907,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8956,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327907,,,train,sda-all,samples/GSE289001/GSM9327907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9327908,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10359,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327908,,,train,sda-all,samples/GSE289001/GSM9327908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9327909,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,11985,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327909,,,train,sda-all,samples/GSE289001/GSM9327909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9327910,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9067,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327910,,,train,sda-all,samples/GSE289001/GSM9327910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9327911,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8147,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327911,,,train,sda-all,samples/GSE289001/GSM9327911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM9327912,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216;MONDO:0023370,DICER1-related tumor predisposition;neoplastic disease or syndrome,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,6355,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327912,,,train,sda-all,samples/GSE289001/GSM9327912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9327913,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,11307,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327913,,,train,sda-all,samples/GSE289001/GSM9327913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9327914,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10663,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327914,,,train,sda-all,samples/GSE289001/GSM9327914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327915,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10325,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327915,,,train,sda-all,samples/GSE289001/GSM9327915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9327916,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8470,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327916,,,train,sda-all,samples/GSE289001/GSM9327916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",disease_status;life_stage,low_confidence_annotation
GSM9327917,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0100216,DICER1-related tumor predisposition,disease,mondo_predicate (Luna: perturbation),,Dicer1 mutant,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9659,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327917,,,train,sda-all,samples/GSE289001/GSM9327917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.48}",disease_status;life_stage,low_confidence_annotation
GSM9327918,GSE289001,GSE289001,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,,tumour tissue,MONDO:0021163;MONDO:0002616;MONDO:0100216,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,disease,luna,,Dicer1 mutant,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,162445,379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41912509,,GSM9327918,,,train,sda-all,samples/GSE289001/GSM9327918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8782649,GSE289052,GSE289052,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002028,hindbrain,Brain,tumour tissue,MONDO:0004993,carcinoma,disease,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,neonatal or infant,luna,neonatal or infant,17 days,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3285,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.514240596958139,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782649,,,train,sda-all,samples/GSE289052/GSM8782649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8782650,GSE289052,GSE289052,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,Brain,tumour tissue,MONDO:0004993,carcinoma,disease,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,neonatal or infant,luna,neonatal or infant,14 days,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,2218,19465,counts,um,1.0,verified,True,H&E-like (heuristic),3.02389135308523,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782650,,,train,sda-all,samples/GSE289052/GSM8782650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8782651,GSE289052,GSE289052,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002028,hindbrain,Brain,tumour tissue,MONDO:0004993,carcinoma,disease,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,neonatal or infant,luna,neonatal or infant,14 days,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,1679,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.554767874455806,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782651,,,train,sda-all,samples/GSE289052/GSM8782651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8782652,GSE289052,GSE289052,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,Brain,tumour tissue,MONDO:0004993,carcinoma,disease,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,neonatal or infant,luna,neonatal or infant,14 days,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,3208,19465,counts,um,1.0,verified,True,H&E-like (heuristic),3.0077793507251864,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42629571,,GSM8782652,,,train,sda-all,samples/GSE289052/GSM8782652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM8782653,GSE289052,GSE289052,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002028,hindbrain,Brain,tumour tissue,MONDO:0004993,carcinoma,disease,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,neonatal or infant,luna,neonatal or infant,15 days,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,4003,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.510044349652199,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782653,,,train,sda-all,samples/GSE289052/GSM8782653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8782654,GSE289052,GSE289052,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,tumour tissue,MONDO:0004993,carcinoma,disease,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,neonatal or infant,luna,neonatal or infant,15 days,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,visium,,,spot,4096,19465,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.516320559751822,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782654,,,train,sda-all,samples/GSE289052/GSM8782654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.9500000000000001, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8782667,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,39707,36536,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782667,,,train,sda-all,samples/GSE289054/GSM8782667,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8782668,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,41616,35049,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782668,,,train,sda-all,samples/GSE289054/GSM8782668,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8782669,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,42604,34854,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782669,,,train,sda-all,samples/GSE289054/GSM8782669,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8782670,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,39823,34967,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782670,,,train,sda-all,samples/GSE289054/GSM8782670,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8782671,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,44089,36084,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782671,,,train,sda-all,samples/GSE289054/GSM8782671,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8782672,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,42506,40004,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782672,,,train,sda-all,samples/GSE289054/GSM8782672,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8782673,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,41761,27569,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782673,,,train,sda-all,samples/GSE289054/GSM8782673,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM8782674,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,44944,29035,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782674,,,train,sda-all,samples/GSE289054/GSM8782674,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8782675,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,44938,37773,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782675,,,train,sda-all,samples/GSE289054/GSM8782675,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8782676,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,42626,37558,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782676,,,train,sda-all,samples/GSE289054/GSM8782676,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM8782677,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,41702,39236,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782677,,,train,sda-all,samples/GSE289054/GSM8782677,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.85}",,
GSM8782678,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,43736,37954,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782678,,,train,sda-all,samples/GSE289054/GSM8782678,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8782679,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,44927,36136,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782679,,,train,sda-all,samples/GSE289054/GSM8782679,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8782680,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,44698,36129,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782680,,,train,sda-all,samples/GSE289054/GSM8782680,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8782681,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,43958,36385,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782681,,,train,sda-all,samples/GSE289054/GSM8782681,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8782682,GSE289054,GSE289054,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,Homo sapiens,9606,human,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,heart,luna,UBERON:0002349,myocardium,Left Ventricular Anterior Wall,xenograft,,,perturbation,luna,,Cardiomyocytes only; 21 day post-injection harvest,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-Frozen,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,46611,38592,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41100583,,GSM8782682,,,train,sda-all,samples/GSE289054/GSM8782682,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8785666,GSE289170+GSE289175,GSE289170,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Semi-allogeneic,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2599,19465,counts,pixel,4.687767690490729,platform_constant,True,H&E,4.687767690490729,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785666,,,test,hesrt,samples/GSE289170/GSM8785666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785667,GSE289170+GSE289175,GSE289170,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Semi-allogeneic,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3660,19465,counts,pixel,4.677544809840248,platform_constant,True,H&E,4.677544809840248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785667,,,test,hesrt,samples/GSE289170/GSM8785667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785668,GSE289170+GSE289175,GSE289170,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Semi-allogeneic,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2294,19465,counts,pixel,4.68096668944405,platform_constant,True,H&E,4.68096668944405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785668,,,test,hesrt,samples/GSE289170/GSM8785668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785669,GSE289170+GSE289175,GSE289170,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Syngeneic,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2814,19465,counts,pixel,4.682879072842189,platform_constant,True,H&E,4.682879072842189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785669,,,test,hesrt,samples/GSE289170/GSM8785669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8785670,GSE289170+GSE289175,GSE289170,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Syngeneic,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3569,19465,counts,pixel,4.673254012373388,platform_constant,True,H&E,4.673254012373388,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785670,,,test,hesrt,samples/GSE289170/GSM8785670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785671,GSE289170+GSE289175,GSE289170,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Syngeneic,embryonic,age rule: embryonic day,embryonic,12.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2898,19465,counts,pixel,4.677618957868,platform_constant,True,H&E,4.677618957868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785671,,,test,hesrt,samples/GSE289170/GSM8785671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8788015,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13976,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999922472606988,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788015,,,train,sda-all,samples/GSE289263/GSM8788015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.35000000000000003, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM8788016,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24291,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999850711988975,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788016,,,train,sda-all,samples/GSE289263/GSM8788016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.39, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8788017,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4835,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999778813259407,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788017,,,train,sda-all,samples/GSE289263/GSM8788017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.42, ""life_stage"": 0.8200000000000001}",uberon,low_confidence_annotation
GSM8788018,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1949,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000245249896736,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788018,,,train,sda-all,samples/GSE289263/GSM8788018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.37, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM8788019,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6918,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999882449747267,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788019,,,train,sda-all,samples/GSE289263/GSM8788019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8788020,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11970,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997353875102907,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788020,,,train,sda-all,samples/GSE289263/GSM8788020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.31, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8788021,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10239,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000160462130937,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788021,,,train,sda-all,samples/GSE289263/GSM8788021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.35000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8788022,GSE289263,GSE289263,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10310,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999919732134667,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788022,,,train,sda-all,samples/GSE289263/GSM8788022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 0.37, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM8788640,GSE289299,GSE289299,Syrah: a pipeline to maximize spatial transcriptomics data output,Schmidtea mediterranea,79327,freshwater planarian,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,other,luna,,,worm fragments,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Slide-seq,release v3,Slide-seqV2,sequencing-based,Slide-seqV2,,,bead,31731,21923,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42081452,,SS-GSM8788640,same_section_within_series,GSM8788641,train,sda-all,samples/GSE289299/GSM8788640,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 0.89, ""disease_status"": 0.52, ""uberon"": NaN, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8789932,GSE289363,GSE289363,Intratumoral spatiotemporal heterogeneity of HPV status in HPV-associated oropharyngeal squamous cell carcinoma with clinical record,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,Tonsil,tumour tissue,MONDO:0044704,oropharynx squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4925,18085,counts,um,1.0,verified,True,H&E-like (heuristic),10.376011331802593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41943047,,GSM8789932,,,train,sda-all,samples/GSE289363/GSM8789932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8789933,GSE289363,GSE289363,Intratumoral spatiotemporal heterogeneity of HPV status in HPV-associated oropharyngeal squamous cell carcinoma with clinical record,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,Tonsil,tumour tissue,MONDO:0044704,oropharynx squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4962,18085,counts,um,1.0,verified,True,H&E-like (heuristic),8.009124991516748,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,41943047,,GSM8789933,,,train,sda-all,samples/GSE289363/GSM8789933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8789934,GSE289363,GSE289363,Intratumoral spatiotemporal heterogeneity of HPV status in HPV-associated oropharyngeal squamous cell carcinoma with clinical record,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,tonsil,luna,UBERON:0002372,tonsil,Tonsil,tumour tissue,MONDO:0044704,oropharynx squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4952,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.069156776429502,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41943047,,GSM8789934,,,train,sda-all,samples/GSE289363/GSM8789934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8795105,GSE289496,GSE289496,Granzyme K CD8⁺ T cells with tissue-resident features promote intestinal inflammation in patients with Crohn’s disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Inflamed small intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,visium,,,spot,3481,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.965765012858335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42409960,,GSM8795105,,,train,sda-all,samples/GSE289496/GSM8795105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8797488,GSE289717,GSE289717,Vesicles Secreted by Renal Cell Carcinoma Cells Cause Vascular Endothelial Cells to Express PSMA and Drive Tumor Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney cancer,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,671854,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.230933247456304,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39936957,,GSM8797488,,,train,sda-all,samples/GSE289717/GSM8797488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8797973,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2895,17943,counts,pixel,4.167857284564286,platform_constant,True,H&E,4.167857284564286,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797973,,,train,hesrt,samples/GSE289745/GSM8797973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM8797974,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1274,17943,counts,pixel,4.061251358229578,platform_constant,True,H&E,4.061251358229578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797974,,,train,hesrt,samples/GSE289745/GSM8797974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797975,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1514,17943,counts,pixel,4.103777687364363,platform_constant,True,H&E,4.103777687364363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797975,,,train,hesrt,samples/GSE289745/GSM8797975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM8797976,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2041,17943,counts,pixel,4.117953178478642,platform_constant,True,H&E,4.117953178478642,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797976,,,train,hesrt,samples/GSE289745/GSM8797976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797977,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2887,17943,counts,pixel,4.189285709426141,platform_constant,True,H&E,4.189285709426141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797977,,,train,hesrt,samples/GSE289745/GSM8797977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797978,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3195,17943,counts,pixel,4.135672576773078,platform_constant,True,H&E,4.135672576773078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797978,,,train,hesrt,samples/GSE289745/GSM8797978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797979,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2779,17943,counts,pixel,4.071883046523422,platform_constant,True,H&E,4.071883046523422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797979,,,train,hesrt,samples/GSE289745/GSM8797979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797980,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2063,17943,counts,pixel,4.135549343710302,platform_constant,True,H&E,4.135549343710302,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797980,,,train,hesrt,samples/GSE289745/GSM8797980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8797981,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2748,17943,counts,pixel,4.167567160881076,platform_constant,True,H&E,4.167567160881076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797981,,,train,hesrt,samples/GSE289745/GSM8797981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797982,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2163,17943,counts,pixel,4.167567160881085,platform_constant,True,H&E,4.167567160881085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797982,,,train,hesrt,samples/GSE289745/GSM8797982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM8797983,GSE289745,GSE289745,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous squamous cell carcinoma,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,cutaneous squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4271,17943,counts,pixel,4.093146363419655,platform_constant,True,H&E,4.093146363419655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797983,,,train,hesrt,samples/GSE289745/GSM8797983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8801844,GSE289934,GSE289934,Glioma-neuronal circuit remodeling induces regional immunosuppression [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,xenograft,MONDO:0021042,glioma,disease,luna,glioma,SB28 glioma inoculated,adult,age rule: age with unit,adult,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1975,19465,counts,pixel,3.9900500119079223,platform_constant,True,H&E,3.9900500119079223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404658,,GSM8801844,,,train,hesrt,samples/GSE289934/GSM8801844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8801845,GSE289934,GSE289934,Glioma-neuronal circuit remodeling induces regional immunosuppression [visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,xenograft,MONDO:0021042,glioma,disease,luna,glioma,SB28 glioma inoculated,adult,age rule: age with unit,adult,8–10 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1782,19465,counts,pixel,4.0831800026274605,platform_constant,True,H&E,4.0831800026274605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404658,,GSM8801845,,,train,hesrt,samples/GSE289934/GSM8801845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8804262,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28962,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999070017359676,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804262,,,train,sda-all,samples/GSE290041/GSM8804262,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8804263,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52757,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999823217442545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804263,,,train,sda-all,samples/GSE290041/GSM8804263,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804264,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,94727,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117744024491,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804264,,,train,sda-all,samples/GSE290041/GSM8804264,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804265,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57680,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999882214369847,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804265,,,train,sda-all,samples/GSE290041/GSM8804265,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8804266,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,97785,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804266,,,train,sda-all,samples/GSE290041/GSM8804266,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804267,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,98303,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804267,,,train,sda-all,samples/GSE290041/GSM8804267,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804268,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,74147,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999911598302687,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804268,,,train,sda-all,samples/GSE290041/GSM8804268,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804269,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38029,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000073659398939,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804269,,,train,sda-all,samples/GSE290041/GSM8804269,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804270,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,146569,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997056052755534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804270,,,train,sda-all,samples/GSE290041/GSM8804270,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804271,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77326,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804271,,,train,sda-all,samples/GSE290041/GSM8804271,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8804272,GSE290041,GSE290041,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,orophyngeal carcinoma,tumour tissue,MONDO:0044926,oropharyngeal carcinoma,disease,luna,,treatment-naïve,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37874,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862693944803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804272,,,train,sda-all,samples/GSE290041/GSM8804272,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8806098,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Db/db,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2223,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.2800337631637735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41203872,,GSM8806098,,,train,sda-all,samples/GSE290094/GSM8806098,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8806099,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Db/db,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1561,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.275584480253784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41203872,,GSM8806099,,,train,sda-all,samples/GSE290094/GSM8806099,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8806100,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1009,19465,counts,pixel,4.364756320569281,platform_constant,True,H&E,4.364756320569281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806100,,,train,hesrt,samples/GSE290094/GSM8806100,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8806101,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,control,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1127,19465,counts,pixel,5.088645223265412,platform_constant,True,H&E,5.088645223265412,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806101,,,train,hesrt,samples/GSE290094/GSM8806101,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8806102,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,db/db,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1947,19465,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.274628032189409,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41203872,,GSM8806102,,,train,sda-all,samples/GSE290094/GSM8806102,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8806103,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetes,diabetic,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1668,19465,counts,pixel,5.0895058376264775,platform_constant,True,H&E,5.0895058376264775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806103,,,train,hesrt,samples/GSE290094/GSM8806103,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8806104,GSE290094,GSE290094,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetes,diabetic,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1792,19465,counts,pixel,5.089294231783067,platform_constant,True,H&E,5.089294231783067,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806104,,,train,hesrt,samples/GSE290094/GSM8806104,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8809852,GSE290287,GSE290287,Spatial Zonation of Pro- and Anti-inflammatory Tumor Macrophages After Anti-CD40,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,agonistic aCD40 treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,336372,19040,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41176316,,GSM8809852,,,test,hesrt,samples/GSE290287/GSM8809852,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8810740,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005445,visceral leishmaniasis,disease,luna,,L. donovani infected,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1087,32291,counts,pixel,4.299577772823785,platform_constant,True,H&E,4.299577772823785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810740,,,train,hesrt,samples/GSE290324/GSM8810740,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8810741,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005445,visceral leishmaniasis,disease,luna,,L. donovani infected,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1446,32291,counts,pixel,4.464211333471986,platform_constant,True,H&E,4.464211333471986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810741,,,train,hesrt,samples/GSE290324/GSM8810741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8810742,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005445,visceral leishmaniasis,disease,luna,,L. donovani infected,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1769,32291,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.304623781512494,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41862629,,GSM8810742,,,train,sda-all,samples/GSE290324/GSM8810742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810743,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005445,visceral leishmaniasis,disease,luna,,L. donovani infected,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1790,32291,counts,pixel,4.64780702214519,platform_constant,True,H&E,4.64780702214519,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810743,,,train,hesrt,samples/GSE290324/GSM8810743,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810744,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,no treatment,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1198,32291,counts,pixel,4.299999915960803,platform_constant,True,H&E,4.299999915960803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810744,,,train,hesrt,samples/GSE290324/GSM8810744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8810745,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,no treatment,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2475,32291,counts,pixel,4.6436405250137485,platform_constant,True,H&E,4.6436405250137485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810745,,,train,hesrt,samples/GSE290324/GSM8810745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810746,GSE290324,GSE290324,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,no treatment,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1148,32291,counts,pixel,4.474716452889694,platform_constant,True,H&E,4.474716452889694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810746,,,train,hesrt,samples/GSE290324/GSM8810746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810907,GSE290338,GSE290338,Spatial Zonation of Pro- and Anti-inflammatory Tumor Macrophages After Anti-CD40 II,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,24 hours post-irradiation with 12 Gy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,521212,19040,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41176316,,GSM8810907,,,train,hesrt,samples/GSE290338/GSM8810907,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.67, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8810908,GSE290338,GSE290338,Spatial Zonation of Pro- and Anti-inflammatory Tumor Macrophages After Anti-CD40 II,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,7 days post-irradiation with 12 Gy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,649693,19040,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41176316,,GSM8810908,,,train,hesrt,samples/GSE290338/GSM8810908,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8817228,GSE290577,GSE290577,Dynamic responses to rejection in the transplanted human heart revealed through spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hHeart_100g,xenium-2.0.0.10,cell,97262,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000142802741812,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8817228,,,train,sda-all,samples/GSE290577/GSM8817228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8817229,GSE290577,GSE290577,Dynamic responses to rejection in the transplanted human heart revealed through spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hHeart_100g,xenium-2.0.0.10,cell,94842,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999911598302687,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8817229,,,train,sda-all,samples/GSE290577/GSM8817229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8819272,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,classic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1586,36601,counts,pixel,0.7641607199008701,platform_constant,True,H&E,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819272,,,train,hesrt,samples/GSE290670/GSM8819272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8819273,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,pleomorphic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,750,36601,counts,pixel,0.7641607199008701,platform_constant,True,H&E,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819273,,,train,hesrt,samples/GSE290670/GSM8819273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8819274,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,pleomorphic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2371,36601,counts,pixel,0.7641607199008701,platform_constant,True,H&E,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819274,,,train,hesrt,samples/GSE290670/GSM8819274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8819275,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,pleomorphic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1694,36601,counts,pixel,0.7641607199008701,platform_constant,True,H&E,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819275,,,train,hesrt,samples/GSE290670/GSM8819275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8819276,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,classic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1002,36601,counts,pixel,0.7648980573556853,platform_constant,True,H&E,0.7648980573556853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819276,,,train,hesrt,samples/GSE290670/GSM8819276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8819277,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,classic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1409,36601,counts,pixel,0.7648980573556853,platform_constant,True,H&E,0.7648980573556853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819277,,,train,hesrt,samples/GSE290670/GSM8819277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8819278,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,pleomorphic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1552,36601,counts,pixel,0.7936507936507936,platform_constant,True,H&E,0.7936507936507936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819278,,,train,hesrt,samples/GSE290670/GSM8819278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8819279,GSE290670,GSE290670,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Human Breast Cancer,tumour tissue,MONDO:0005051,invasive lobular breast carcinoma,disease,luna,classic ILC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2119,36601,counts,pixel,0.7648980573556853,platform_constant,True,H&E,0.7648980573556853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819279,,,train,hesrt,samples/GSE290670/GSM8819279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8820300,GSE290724,GSE290724,Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,GBM patient brain tissue,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,4177076,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40381621,,GSM8820300,,,val,sda-all,samples/GSE290724/GSM8820300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8820301,GSE290724,GSE290724,Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,GBM patient brain tissue,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,6684118,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40381621,,GSM8820301,,,val,sda-all,samples/GSE290724/GSM8820301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8821265,GSE290762,GSE290762,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,uninfected,adult,age rule: age with unit,juvenile,6–8 weeks,female,extracted field,female,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU S1000,,,,12315,54838,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821265,,,train,hesrt,samples/GSE290762/GSM8821265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8821266,GSE290762,GSE290762,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infected by Salmonella,adult,age rule: age with unit,juvenile,6–8 weeks,female,extracted field,female,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU S1000,,,,14864,54838,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821266,,,train,hesrt,samples/GSE290762/GSM8821266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8821267,GSE290762,GSE290762,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infected by Salmonella,adult,age rule: age with unit,juvenile,6–8 weeks,female,extracted field,female,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU S1000,,,,16259,54838,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821267,,,train,hesrt,samples/GSE290762/GSM8821267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8821268,GSE290762,GSE290762,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,infected by Salmonella,adult,age rule: age with unit,juvenile,6–8 weeks,female,extracted field,female,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMKMANU S1000,,,,17734,54838,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821268,,,train,hesrt,samples/GSE290762/GSM8821268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8825744,GSE290924,GSE290924,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0006256,invasive breast carcinoma,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,DynaSpatial,sequencing-based,DynaSpatial,,,,2172,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825744,,,train,hesrt,samples/GSE290924/GSM8825744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825745,GSE290924,GSE290924,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0006256,invasive breast carcinoma,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,DynaSpatial,sequencing-based,DynaSpatial,,,,2111,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825745,,,train,hesrt,samples/GSE290924/GSM8825745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825746,GSE290924,GSE290924,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0006256,invasive breast carcinoma,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,DynaSpatial,sequencing-based,DynaSpatial,,,,2479,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825746,,,train,hesrt,samples/GSE290924/GSM8825746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825747,GSE290924,GSE290924,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0006256,invasive breast carcinoma,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,DynaSpatial,sequencing-based,DynaSpatial,,,,2387,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825747,,,train,hesrt,samples/GSE290924/GSM8825747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8825748,GSE290924,GSE290924,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0006256,invasive breast carcinoma,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,DynaSpatial,sequencing-based,DynaSpatial,,,,2465,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825748,,,train,hesrt,samples/GSE290924/GSM8825748,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825749,GSE290924,GSE290924,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0006256,invasive breast carcinoma,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,DynaSpatial,sequencing-based,DynaSpatial,,,,1658,36601,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825749,,,train,hesrt,samples/GSE290924/GSM8825749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8829021,GSE291088,GSE291088,CytoSignal Detects Locations and Dynamics of Ligand-Receptor Signaling at Cellular Resolution from Spatial Transcriptomic Data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Whole embryo,whole embryo/organism,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,E12.5,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,93248,19059,counts,um,1.0,verified,True,H&E,2.990063607096558,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8829021,,,train,sda-all,samples/GSE291088/GSM8829021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8830704,GSE291200,GSE291200,Topological velocity inference from spatial transcriptomic data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),uberon_chain,UBERON:0014374,embryoid body,Embryoid Body,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,21784,20699,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,40670711,,GSM8830704,,,train,sda-all,samples/GSE291200/GSM8830704,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8830801,GSE291210,GSE291210,Spatial transcriptomics profile of mammary gland tumours in MMTV-PyMT mouse model of breast cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,breast,luna,UBERON:0000310,breast,FFPE Embedded Tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,663145,285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41781391,,GSM8830801,,,train,sda-all,samples/GSE291210/GSM8830801,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM8830802,GSE291210,GSE291210,Spatial transcriptomics profile of mammary gland tumours in MMTV-PyMT mouse model of breast cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,breast,luna,UBERON:0000310,breast,FFPE Embedded Tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,513963,285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41781391,,GSM8830802,,,train,sda-all,samples/GSE291210/GSM8830802,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8830803,GSE291210,GSE291210,Spatial transcriptomics profile of mammary gland tumours in MMTV-PyMT mouse model of breast cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,breast,luna,UBERON:0000310,breast,FFPE Embedded Tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,786165,285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41781391,,GSM8830803,,,train,sda-all,samples/GSE291210/GSM8830803,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831617,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su001 Post Tumor 1 rep 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,484917,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999926114197885,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831617,,,train,sda-all,samples/GSE291246/GSM8831617,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.66, ""disease_status"": 0.9500000000000001, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8831627,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su001 Post Tumor 1 rep 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,480219,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000014785025726,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831627,,,train,sda-all,samples/GSE291246/GSM8831627,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8831637,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su005 Post Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,70598,533,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999734857412208,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831637,,,train,sda-all,samples/GSE291246/GSM8831637,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8831638,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su007 Post Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15087,527,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000609013398294,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831638,,,train,sda-all,samples/GSE291246/GSM8831638,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8831639,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su002 Pre Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16562,497,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000185154707044,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831639,,,train,sda-all,samples/GSE291246/GSM8831639,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.91, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831640,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su006 Pre Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10137,526,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068194217131,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831640,,,train,sda-all,samples/GSE291246/GSM8831640,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8831641,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su005 Post Tumor 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,62334,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500006867188573,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831641,,,train,sda-all,samples/GSE291246/GSM8831641,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8831642,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su005 Post Tumor 3,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,69023,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997768163713774,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831642,,,train,sda-all,samples/GSE291246/GSM8831642,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8831643,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,,primary tissue,MONDO:0005070,neoplasm,disease,luna,,su005 Post Node 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,217331,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.500006867188573,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831643,,,train,sda-all,samples/GSE291246/GSM8831643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831644,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,,primary tissue,MONDO:0005070,neoplasm,disease,luna,,su005 Post Node 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64126,532,counts,um,1.0,verified,True,fluorescence: DAPI,0.500006867188573,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831644,,,train,sda-all,samples/GSE291246/GSM8831644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831645,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su002 Pre Tumor 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26752,539,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000179487179487,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831645,,,train,sda-all,samples/GSE291246/GSM8831645,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831646,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su002 Post Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10049,527,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999829700272479,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831646,,,train,sda-all,samples/GSE291246/GSM8831646,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.91, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831647,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su007 Pre Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51534,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831647,,,train,sda-all,samples/GSE291246/GSM8831647,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.93, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8831648,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su008 Post Tumor 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45256,539,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000240219629375,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831648,,,train,sda-all,samples/GSE291246/GSM8831648,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.89, ""disease_status"": 0.93, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831649,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su008 Post Tumor 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34270,535,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998455942904196,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831649,,,train,sda-all,samples/GSE291246/GSM8831649,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831650,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su008 Post Tumor 3,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,70943,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999742692466035,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831650,,,train,sda-all,samples/GSE291246/GSM8831650,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.88, ""disease_status"": 0.96, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8831651,GSE291246,GSE291246,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,su008 Post Tumor 4,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55549,526,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831651,,,train,sda-all,samples/GSE291246/GSM8831651,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8833258,GSE291308,GSE291308,"Site-specific phosphorylation of ERα determines sex-dependent metabolic, reproductive, and body compositional phenotypes in mice",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,"formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,136343,1010,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,PASS,,,41438071,,GSM8833258,,,train,sda-all,samples/GSE291308/GSM8833258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8834057,GSE291378,GSE291378,Xenium-based spatial transcriptomics of brains following chronic plastic exposure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64124,503,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999915438965724,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8834057,,,train,sda-all,samples/GSE291378/GSM8834057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8834058,GSE291378,GSE291378,Xenium-based spatial transcriptomics of brains following chronic plastic exposure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,50 nm,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60707,502,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998686087544114,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8834058,,,train,sda-all,samples/GSE291378/GSM8834058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8834059,GSE291378,GSE291378,Xenium-based spatial transcriptomics of brains following chronic plastic exposure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,500 nm,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61914,534,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000144472880376,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8834059,,,train,sda-all,samples/GSE291378/GSM8834059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8834155,GSE291385,GSE291385,Hepatic hematopoiesis hijacked by tumor metastasis promotes immunosuppression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver metastasis,metastasis,MONDO:1060297,metastatic malignant neoplasm in the liver,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,31135,30357,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8834155,,,train,sda-all,samples/GSE291385/GSM8834155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8836004,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,292151,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999182186941166,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836004,,,train,sda-all,samples/GSE291460/GSM8836004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM8836005,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,173767,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000094814508343,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836005,,,train,sda-all,samples/GSE291460/GSM8836005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.84}",,
GSM8836006,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,102452,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000487379437718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836006,,,train,sda-all,samples/GSE291460/GSM8836006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8836007,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,normal,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,145727,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000329380764164,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836007,,,train,sda-all,samples/GSE291460/GSM8836007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8836008,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,perturbation,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,175303,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025883936429,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836008,,,train,sda-all,samples/GSE291460/GSM8836008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8836009,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,perturbation,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,106081,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000028191249436,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836009,,,train,sda-all,samples/GSE291460/GSM8836009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM8836010,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,perturbation,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,112750,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000047749411091,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836010,,,train,sda-all,samples/GSE291460/GSM8836010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8836011,GSE291460,GSE291460,Ontogeny of the spinal cord dorsal horn [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,,,perturbation,luna,,,embryonic,age rule: embryonic day,embryonic,Embryonic day 16.5,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,151641,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051754476762,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836011,,,train,sda-all,samples/GSE291460/GSM8836011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8840044,GSE291687,GSE291687,KRAS G12C inhibition combined with CD47 and immune checkpoint blockage overcomes intrinsic resistance to concomitant KRAS G12C and immune checkpoint inhibitor therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0021117,lung neoplasm,disease,luna,,anti-Cd47ab; Combination of anti-Cd47ab and Kras-inhibitor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,74276,19059,counts,um,1.0,verified,True,H&E,0.9361769020351006,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40885190,,GSM8840044,,,train,sda-all,samples/GSE291687/GSM8840044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8840045,GSE291687,GSE291687,KRAS G12C inhibition combined with CD47 and immune checkpoint blockage overcomes intrinsic resistance to concomitant KRAS G12C and immune checkpoint inhibitor therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,xenograft,MONDO:0021117,lung neoplasm,disease,luna,,no-treatment; Kras-inhibitor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,88131,19059,counts,um,1.0,verified,True,H&E,0.701440917937038,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40885190,,GSM8840045,,,train,sda-all,samples/GSE291687/GSM8840045,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.58, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8840046,GSE291688,GSE291688,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain with Medulloblastoma,tumour tissue,,,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,133986,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499991935483871,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840046,,,val,sda-all,samples/GSE291688/GSM8840046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8840047,GSE291688,GSE291688,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain with Medulloblastoma,tumour tissue,,,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,145016,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000096193689695,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840047,,,val,sda-all,samples/GSE291688/GSM8840047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8840048,GSE291688,GSE291688,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain with Medulloblastoma,tumour tissue,,,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,211673,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000049113769317,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840048,,,val,sda-all,samples/GSE291688/GSM8840048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8840049,GSE291688,GSE291688,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain with Medulloblastoma,tumour tissue,,,disease,luna,Medulloblastoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,262183,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999954660863256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840049,,,val,sda-all,samples/GSE291688/GSM8840049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8842773,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,maraviroc,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2338,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.349797670553951,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842773,,,train,sda-all,samples/GSE291813/GSM8842773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842774,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,maraviroc,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2706,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.339880883338262,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842774,,,train,sda-all,samples/GSE291813/GSM8842774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842775,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,maraviroc,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2851,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.342633587953529,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842775,,,train,sda-all,samples/GSE291813/GSM8842775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842776,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,maraviroc,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3182,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.346549366377223,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842776,,,train,sda-all,samples/GSE291813/GSM8842776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842777,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2803,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.201005713916135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842777,,,train,sda-all,samples/GSE291813/GSM8842777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842778,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3107,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9338548415756383,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842778,,,train,sda-all,samples/GSE291813/GSM8842778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8842779,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2359,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9603273723237145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842779,,,train,sda-all,samples/GSE291813/GSM8842779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842780,GSE291813,GSE291813,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,metastasis,MONDO:0007254,breast cancer,disease,luna,,vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2997,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9987238887256256,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842780,,,train,sda-all,samples/GSE291813/GSM8842780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8850433,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22568,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500019337871287,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850433,,,train,sda-all,samples/GSE292123/GSM8850433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850434,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20690,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000195007800312,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850434,,,train,sda-all,samples/GSE292123/GSM8850434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8850435,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28780,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011474205984,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850435,,,train,sda-all,samples/GSE292123/GSM8850435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850436,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21603,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.50000589066918,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850436,,,train,sda-all,samples/GSE292123/GSM8850436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850437,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29378,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999931180033033,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850437,,,train,sda-all,samples/GSE292123/GSM8850437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8850438,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23627,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850438,,,train,sda-all,samples/GSE292123/GSM8850438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8850439,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27541,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000060286619815,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850439,,,train,sda-all,samples/GSE292123/GSM8850439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850440,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12554,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850440,,,train,sda-all,samples/GSE292123/GSM8850440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850441,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27359,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850441,,,train,sda-all,samples/GSE292123/GSM8850441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850442,GSE292123,GSE292123,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,urticarial rash,primary tissue,MONDO:0018304,Schnitzler syndrome,disease,luna,Schnitzler syndrome,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16706,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999871040957383,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850442,,,train,sda-all,samples/GSE292123/GSM8850442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8851325,GSE292156,GSE292156,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0001821,sebaceous gland,Skin,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,28526,35127,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,40449655,,GSM8851325,,,train,sda-all,samples/GSE292156/GSM8851325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8851326,GSE292156,GSE292156,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0001821,sebaceous gland,Skin,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,25242,33379,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,40449655,,GSM8851326,,,train,sda-all,samples/GSE292156/GSM8851326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8851327,GSE292156,GSE292156,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0001821,sebaceous gland,Skin,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,24557,33785,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,40449655,,GSM8851327,,,train,sda-all,samples/GSE292156/GSM8851327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8855042,GSE292268,GSE292268,Spatial single-cell transcriptomics of MASLD-affected liver biopsy samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMX,,,cell,54921,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40262132,,GSM8855042,,,train,sda-all,samples/GSE292268/GSM8855042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855043,GSE292268,GSE292268,Spatial single-cell transcriptomics of MASLD-affected liver biopsy samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMX,,,cell,52335,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40262132,,GSM8855043,,,train,sda-all,samples/GSE292268/GSM8855043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8855703,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8458,18120,counts,um,1.0,verified,True,H&E-like (heuristic),16.37637469714251,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855703,,,train,sda-all,samples/GSE292299/GSM8855703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855704,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6907,18120,counts,um,1.0,verified,True,H&E-like (heuristic),9.550687471935568,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855704,,,train,sda-all,samples/GSE292299/GSM8855704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855705,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9158,18120,counts,um,1.0,verified,True,H&E-like (heuristic),9.224979233369051,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855705,,,train,sda-all,samples/GSE292299/GSM8855705,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855706,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9516,18120,counts,um,1.0,verified,True,H&E-like (heuristic),10.9366280382293,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855706,,,train,sda-all,samples/GSE292299/GSM8855706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855707,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,NSCLC tumor,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5388,18120,counts,um,1.0,verified,True,H&E-like (heuristic),14.34721964370728,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855707,,,train,sda-all,samples/GSE292299/GSM8855707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855708,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10078,18120,counts,um,1.0,verified,True,H&E-like (heuristic),14.433796117110576,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855708,,,train,sda-all,samples/GSE292299/GSM8855708,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855709,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5705,18120,counts,um,1.0,verified,True,H&E-like (heuristic),7.828303642780515,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855709,,,train,sda-all,samples/GSE292299/GSM8855709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8855710,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,NSCLC tumor,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5218,18120,counts,um,1.0,verified,True,H&E-like (heuristic),5.984771810625042,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855710,,,train,sda-all,samples/GSE292299/GSM8855710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855711,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12242,18120,counts,um,1.0,verified,True,H&E-like (heuristic),13.690222177208893,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855711,,,train,sda-all,samples/GSE292299/GSM8855711,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855712,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8862,18120,counts,um,1.0,verified,True,H&E-like (heuristic),19.22920996493311,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855712,,,train,sda-all,samples/GSE292299/GSM8855712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855713,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13202,18120,counts,um,1.0,verified,True,H&E-like (heuristic),12.527683653278112,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855713,,,train,sda-all,samples/GSE292299/GSM8855713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855714,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,NSCLC tumor,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2131,18120,counts,um,1.0,verified,True,H&E-like (heuristic),7.657900547001402,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855714,,,train,sda-all,samples/GSE292299/GSM8855714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855715,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,uberon_chain,UBERON:0001567,cheek,NSCLC tumor,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5247,18120,counts,um,1.0,verified,True,H&E-like (heuristic),9.367875367707832,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855715,,,train,sda-all,samples/GSE292299/GSM8855715,sda-tissue-disease-2.3,"{""organ"": 0.28, ""sample_kind"": 0.43, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;sample_kind,low_confidence_annotation
GSM8855716,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0000977,pleura,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1862,18120,counts,um,1.0,verified,True,H&E-like (heuristic),8.281371867301788,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855716,,,train,sda-all,samples/GSE292299/GSM8855716,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.65, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8855717,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,NSCLC tumor,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13002,18120,counts,um,1.0,verified,True,H&E-like (heuristic),14.591720756366335,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855717,,,train,sda-all,samples/GSE292299/GSM8855717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855718,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0000977,pleura,NSCLC tumor,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5351,18120,counts,um,1.0,verified,True,H&E-like (heuristic),11.166434273112843,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855718,,,train,sda-all,samples/GSE292299/GSM8855718,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 0.65, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8855719,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,DLBCL tumor,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12413,18085,counts,um,1.0,verified,True,H&E-like (heuristic),8.264852912214588,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855719,,,train,sda-all,samples/GSE292299/GSM8855719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855720,GSE292299,GSE292299,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,DLBCL tumor,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13713,18085,counts,um,1.0,verified,True,H&E-like (heuristic),10.230520490268521,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855720,,,train,sda-all,samples/GSE292299/GSM8855720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8858311,GSE292394,GSE292394,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:1000021,skin of face,,primary tissue,,,normal,luna,,Healthy,adult,age rule: age in years,adult,49 y,female,extracted field,Female,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,69492,315,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,40449655,,GSM8858311,,,test,sda-all,samples/GSE292394/GSM8858311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8863903,GSE292706,GSE292706,TMPRSS11B promotes an acidified microenvironment and immune suppression in squamous lung cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005097;MONDO:0005061,squamous cell lung carcinoma;lung adenocarcinoma,disease,luna,lung squamous cell carcinoma,"SNL LUSC GEMM, 11 months post Ad-Cre",adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4282,19465,counts,pixel,1.219421521699385,platform_constant,True,H&E,1.219421521699385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41214366,,GSM8863903,,,train,hesrt,samples/GSE292706/GSM8863903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8865417,GSE292791,GSE292791,Cosmx Spatial Analysis of whole brain slices and ventral pallidum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,Whole Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,8 week old,male,extracted field,male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,Cosmx,,,cell,131548,1000,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40240618,,GSM8865417,,,train,sda-all,samples/GSE292791/GSM8865417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8870977,GSE292956,GSE292956,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Donor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3433,18085,counts,um,1.0,verified,True,H&E-like (heuristic),10.220516044355595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8870977,,,train,sda-all,samples/GSE292956/GSM8870977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8870978,GSE292956,GSE292956,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Donor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.9639538071879965,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),cluttered background,,,GSM8870978,,,train,sda-all,samples/GSE292956/GSM8870978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8870979,GSE292956,GSE292956,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,Donor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4257,18085,counts,um,1.0,verified,True,H&E-like (heuristic),10.131067602646484,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,,,GSM8870979,,,train,sda-all,samples/GSE292956/GSM8870979,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8870980,GSE292956,GSE292956,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,,IPF,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4595,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.95719831774099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8870980,,,train,sda-all,samples/GSE292956/GSM8870980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8870981,GSE292956,GSE292956,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0800504,idiopathic pulmonary fibrosis,disease,luna,,IPF,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4704,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.043219719031177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8870981,,,train,sda-all,samples/GSE292956/GSM8870981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8874476,GSE293043,GSE293043,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Stereo-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,20 years,female,extracted field,Female,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,47563,31269,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8874476,,,train,sda-all,samples/GSE293043/GSM8874476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8874477,GSE293043,GSE293043,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Stereo-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,juvenile,age rule: age in years,juvenile,13 years,male,extracted field,Male,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,47776,29850,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8874477,,,train,sda-all,samples/GSE293043/GSM8874477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8874478,GSE293043,GSE293043,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Stereo-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,adrenal gland,luna,UBERON:0002369,adrenal gland,adult adrenal gland,primary tissue,,,normal,luna,,,adult,age rule: age in years,adult,40 years,male,extracted field,Male,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,77308,29813,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8874478,,,train,sda-all,samples/GSE293043/GSM8874478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8875080,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Soft-tissue local osteosarcoma relapse,tumour tissue,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1243,17943,counts,um,1.0,verified,True,H&E,4.24032496939305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875080,,,train,sda-all,samples/GSE293065/GSM8875080,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.7000000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8875081,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Soft-tissue local periprosthetic osteosarcoma relapse,tumour tissue,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,570,17922,counts,um,1.0,verified,True,H&E,4.092969677249734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875081,,,train,sda-all,samples/GSE293065/GSM8875081,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8875082,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Soft-tissue local osteosarcoma relapse,tumour tissue,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,662,17943,counts,um,1.0,verified,True,H&E,4.026417398064894,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875082,,,train,sda-all,samples/GSE293065/GSM8875082,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8875083,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3799,17943,counts,um,1.0,verified,True,H&E,4.001808187222318,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875083,,,train,sda-all,samples/GSE293065/GSM8875083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875084,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2901,17943,counts,um,1.0,verified,True,H&E,4.096870489876657,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875084,,,train,sda-all,samples/GSE293065/GSM8875084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875085,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2406,17943,counts,um,1.0,verified,True,H&E,4.096613840205168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875085,,,train,sda-all,samples/GSE293065/GSM8875085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875086,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4352,17922,counts,um,1.0,verified,True,H&E,4.059978735714442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875086,,,train,sda-all,samples/GSE293065/GSM8875086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8875087,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4128,17922,counts,um,1.0,verified,True,H&E,4.260288457988474,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875087,,,train,sda-all,samples/GSE293065/GSM8875087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875088,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,677,17943,counts,um,1.0,verified,True,H&E,4.242597904199281,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875088,,,train,sda-all,samples/GSE293065/GSM8875088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875089,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2945,17943,counts,um,1.0,verified,True,H&E,3.988239719907215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875089,,,train,sda-all,samples/GSE293065/GSM8875089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8875090,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph node metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1218,17943,counts,um,1.0,verified,True,H&E,4.2409869316753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875090,,,train,sda-all,samples/GSE293065/GSM8875090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8875091,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2290,17943,counts,um,1.0,verified,True,H&E,4.093751563760936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875091,,,train,sda-all,samples/GSE293065/GSM8875091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875092,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3374,17943,counts,um,1.0,verified,True,H&E,4.241576593552602,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875092,,,train,sda-all,samples/GSE293065/GSM8875092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8875093,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3012,17943,counts,um,1.0,verified,True,H&E,4.093148731677203,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875093,,,train,sda-all,samples/GSE293065/GSM8875093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875094,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3297,17943,counts,um,1.0,verified,True,H&E,3.961723383375854,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875094,,,train,sda-all,samples/GSE293065/GSM8875094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875095,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3140,17943,counts,um,1.0,verified,True,H&E,4.093447816701079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875095,,,train,sda-all,samples/GSE293065/GSM8875095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875096,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung metastatic osteosarcoma,metastasis,MONDO:0009807,osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3635,17943,counts,um,1.0,verified,True,H&E,4.093592382415134,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875096,,,train,sda-all,samples/GSE293065/GSM8875096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875097,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,829,17943,counts,um,1.0,verified,True,H&E,4.119524702494144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875097,,,train,sda-all,samples/GSE293065/GSM8875097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875098,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,712,17943,counts,um,1.0,verified,True,H&E,4.003529002917406,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875098,,,train,sda-all,samples/GSE293065/GSM8875098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.33, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8875099,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1190,17943,counts,um,1.0,verified,True,H&E,4.068819184600977,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875099,,,train,sda-all,samples/GSE293065/GSM8875099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875100,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,842,17943,counts,um,1.0,verified,True,H&E,4.020298117928821,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875100,,,train,sda-all,samples/GSE293065/GSM8875100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875101,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1805,17943,counts,um,1.0,verified,True,H&E,3.934482783578301,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875101,,,train,sda-all,samples/GSE293065/GSM8875101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8875102,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,461,17943,counts,um,1.0,verified,True,H&E,3.9747045810137713,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875102,,,train,sda-all,samples/GSE293065/GSM8875102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875103,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,754,17943,counts,um,1.0,verified,True,H&E,3.9480570952327723,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875103,,,train,sda-all,samples/GSE293065/GSM8875103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8875104,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2191,17943,counts,um,1.0,verified,True,H&E,3.952768127673753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875104,,,train,sda-all,samples/GSE293065/GSM8875104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875105,GSE293065,GSE293065,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Primary bone osteosarcoma,tumour tissue,MONDO:0002629,bone osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,876,17943,counts,um,1.0,verified,True,H&E,3.989067994291891,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875105,,,train,sda-all,samples/GSE293065/GSM8875105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876950,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,61418,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876950,,,train,sda-all,samples/GSE293124/GSM8876950,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8876951,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,171406,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876951,,,train,sda-all,samples/GSE293124/GSM8876951,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8876952,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,119217,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876952,,,train,sda-all,samples/GSE293124/GSM8876952,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876953,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,75613,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876953,,,train,sda-all,samples/GSE293124/GSM8876953,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.0, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876954,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,54334,1207,counts,pixel,,unresolved,False,,,ABSENT,FAILED,VERIFIED,,,VERIFIED,,,,42167227,,GSM8876954,,,train,sda-all,samples/GSE293124/GSM8876954,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876955,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,32162,1207,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,42167227,,GSM8876955,,,train,sda-all,samples/GSE293124/GSM8876955,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876956,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,60351,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876956,,,train,sda-all,samples/GSE293124/GSM8876956,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876957,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,237675,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876957,,,train,sda-all,samples/GSE293124/GSM8876957,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.32, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8876958,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,52722,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876958,,,train,sda-all,samples/GSE293124/GSM8876958,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.2, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876959,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,185327,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876959,,,train,sda-all,samples/GSE293124/GSM8876959,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8876960,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,52500,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876960,,,train,sda-all,samples/GSE293124/GSM8876960,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876961,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,583620,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876961,,,train,sda-all,samples/GSE293124/GSM8876961,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.26, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8876962,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,76057,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876962,,,train,sda-all,samples/GSE293124/GSM8876962,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876963,GSE293124,GSE293124,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,colorectal cancer,metastasis,MONDO:0024331,colorectal carcinoma,disease,luna,Metastatic,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,139157,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42167227,,GSM8876963,,,train,sda-all,samples/GSE293124/GSM8876963,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8877284,GSE293144,GSE293144,A Deep Dive into the Functional and Spatial Heterogeneity of Lung Interstitial Macrophages [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,LPS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1717519,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42358977,,GSM8877284,,,test,sda-all,samples/GSE293144/GSM8877284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8877285,GSE293144,GSE293144,A Deep Dive into the Functional and Spatial Heterogeneity of Lung Interstitial Macrophages [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Naïve,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mLung_100g,xenium-2.0.0.10,cell,1183880,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999945645084141,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42358977,,GSM8877285,,,test,sda-all,samples/GSE293144/GSM8877285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8878529,GSE293199,GSE293199,A visual–omics foundation model to bridge histopathology image with transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,uberon_chain,UBERON:0000310,breast,breast,xenograft,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Breast Gene Expression,xenium-2.0.0.10,cell,189598,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999890452310239,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40442373,,GSM8878529,,,train,sda-all,samples/GSE293199/GSM8878529,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8881930,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,,,normal,luna,,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,601,36601,counts,pixel,4.8408922084519475,platform_constant,True,H&E,4.8408922084519475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881930,,,train,hesrt,samples/GSE293427/GSM8881930,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881931,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,,,normal,luna,,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,711,36601,counts,pixel,4.83955890369402,platform_constant,True,H&E,4.83955890369402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881931,,,train,hesrt,samples/GSE293427/GSM8881931,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881932,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,,,normal,luna,,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,669,36601,counts,pixel,4.842558993454119,platform_constant,True,H&E,4.842558993454119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881932,,,train,hesrt,samples/GSE293427/GSM8881932,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8881933,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,,,normal,luna,,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,701,36601,counts,pixel,4.6045885058682945,platform_constant,True,H&E,4.6045885058682945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881933,,,train,hesrt,samples/GSE293427/GSM8881933,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881934,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,,,normal,luna,,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,645,36601,counts,pixel,4.6070795153609065,platform_constant,True,H&E,4.6070795153609065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881934,,,train,hesrt,samples/GSE293427/GSM8881934,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8881935,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,734,36601,counts,pixel,4.627990437672536,platform_constant,True,H&E,4.627990437672536,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881935,,,train,hesrt,samples/GSE293427/GSM8881935,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881936,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,851,36601,counts,pixel,5.511288946579142,platform_constant,True,H&E,5.511288946579142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881936,,,train,hesrt,samples/GSE293427/GSM8881936,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881937,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,959,36601,counts,pixel,5.510845855368486,platform_constant,True,H&E,5.510845855368486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881937,,,train,hesrt,samples/GSE293427/GSM8881937,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881938,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1093,36601,counts,pixel,5.511288946579142,platform_constant,True,H&E,5.511288946579142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881938,,,train,hesrt,samples/GSE293427/GSM8881938,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881939,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1471,36601,counts,pixel,4.840225464253841,platform_constant,True,H&E,4.840225464253841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881939,,,train,hesrt,samples/GSE293427/GSM8881939,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881940,GSE293427,GSE293427,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005616,mesenteric artery,Blood Vessel,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,Diabetic,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1437,36601,counts,pixel,4.839225516615058,platform_constant,True,H&E,4.839225516615058,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881940,,,train,hesrt,samples/GSE293427/GSM8881940,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8885853,GSE293582,GSE293582,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,eye,luna,UBERON:0000966,retina,retinal organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,59904,36601,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885853,,,train,sda-all,samples/GSE293582/GSM8885853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8885854,GSE293582,GSE293582,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,eye,luna,UBERON:0000966,retina,retinal organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,34944,36601,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885854,,,train,sda-all,samples/GSE293582/GSM8885854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8885855,GSE293582,GSE293582,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,eye,luna,UBERON:0000966,retina,retinal organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,74880,36601,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885855,,,train,sda-all,samples/GSE293582/GSM8885855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM8885856,GSE293582,GSE293582,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,eye,luna,UBERON:0000966,retina,retinal organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,29952,36601,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885856,,,train,sda-all,samples/GSE293582/GSM8885856,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8889642,GSE293759,GSE293759,Spatial and Functional Specialization of Human Splenic Innate Lymphoid Cells [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,Formalin-fixed spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,34,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,911457,422,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8889642,,,train,sda-all,samples/GSE293759/GSM8889642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8889643,GSE293759,GSE293759,Spatial and Functional Specialization of Human Splenic Innate Lymphoid Cells [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,Formalin-fixed spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,48,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,964648,422,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8889643,,,train,sda-all,samples/GSE293759/GSM8889643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8889644,GSE293759,GSE293759,Spatial and Functional Specialization of Human Splenic Innate Lymphoid Cells [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,spleen,luna,UBERON:0002106,spleen,Formalin-fixed spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,29,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2862735,422,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM8889644,,,train,sda-all,samples/GSE293759/GSM8889644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8890017,GSE293783,GSE293783,An organoid model of the human adrenal cortex identifies drivers of steroidogenesis and zonation [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adrenal gland,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),fetal,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,111746,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8890017,,,train,hesrt,samples/GSE293783/GSM8890017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",sample_kind;life_stage,low_confidence_annotation
GSM8890018,GSE293783,GSE293783,An organoid model of the human adrenal cortex identifies drivers of steroidogenesis and zonation [spatial],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,Adrenal gland,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,127893,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8890018,,,train,hesrt,samples/GSE293783/GSM8890018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.37, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.88}",sample_kind,low_confidence_annotation
GSM8890214,GSE293800,GSE293800,Cancer agnostic potential of CAR T cells targeting the urokinase plasminogen activator receptor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77695,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999920402445237,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41916312,,GSM8890214,,,train,sda-all,samples/GSE293800/GSM8890214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8893111,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,,,normal,luna,,Control brain with APOE3/3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13235,18085,counts,pixel,14.41080866726264,platform_constant,True,H&E,14.41080866726264,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893111,,,train,hesrt,samples/GSE293896/GSM8893111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8893112,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,,,normal,luna,,Control brain with APOE3/3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12985,18085,counts,pixel,15.402003571160476,platform_constant,True,H&E,15.402003571160476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893112,,,train,hesrt,samples/GSE293896/GSM8893112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8893113,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,,,normal,luna,,Control brain with APOE3/4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13079,18085,counts,pixel,13.146702987539177,platform_constant,True,H&E,13.146702987539177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893113,,,train,hesrt,samples/GSE293896/GSM8893113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893114,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,,,normal,luna,,Control brain with APOE3/4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11931,18085,counts,pixel,13.905166136701354,platform_constant,True,H&E,13.905166136701354,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893114,,,train,hesrt,samples/GSE293896/GSM8893114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8893115,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,MONDO:0007488,Lewy body dementia,disease,luna,Lewy Body Dementia,LBD brain with APOE3/3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12011,18085,counts,pixel,14.442856741427088,platform_constant,True,H&E,14.442856741427088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893115,,,train,hesrt,samples/GSE293896/GSM8893115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893116,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,MONDO:0007488,Lewy body dementia,disease,luna,Lewy Body Dementia,LBD brain with APOE3/3,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11447,18085,counts,pixel,14.151968621545176,platform_constant,True,H&E,14.151968621545176,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893116,,,train,hesrt,samples/GSE293896/GSM8893116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893117,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,MONDO:0007488,Lewy body dementia,disease,luna,Lewy Body Dementia,LBD brain with APOE3/4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7611,18085,counts,pixel,14.390220980924468,platform_constant,True,H&E,14.390220980924468,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893117,,,train,hesrt,samples/GSE293896/GSM8893117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893118,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,MONDO:0007488,Lewy body dementia,disease,luna,Lewy Body Dementia,LBD brain with APOE3/4,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10187,18085,counts,pixel,12.381061361854178,platform_constant,True,H&E,12.381061361854178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893118,,,train,hesrt,samples/GSE293896/GSM8893118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893119,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,MONDO:0007488,Lewy body dementia,disease,luna,Lewy Body Dementia,LBD brain with APOE3/3 and SNCA triplication,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11002,18085,counts,pixel,8.86842070676877,platform_constant,True,H&E,8.86842070676877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893119,,,train,hesrt,samples/GSE293896/GSM8893119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893120,GSE293896,GSE293896,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,Postmortem temporal cortex,primary tissue,MONDO:0007488,Lewy body dementia,disease,luna,Lewy Body Dementia,LBD brain with APOE3/4 and SNCA triplication,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13770,18085,counts,pixel,13.652344594272655,platform_constant,True,H&E,13.652344594272655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893120,,,train,hesrt,samples/GSE293896/GSM8893120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8895453,GSE293970,GSE293970,Conversion of Th17 into exTh17 sustains rheumatoid-like IL-17-independent inflammatory arthritis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,human synoival tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7774,541,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,41202149,,GSM8895453,,,val,sda-all,samples/GSE293970/GSM8895453,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8895454,GSE293970,GSE293970,Conversion of Th17 into exTh17 sustains rheumatoid-like IL-17-independent inflammatory arthritis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,human synoival tissue,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7791,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41202149,,GSM8895454,,,val,sda-all,samples/GSE293970/GSM8895454,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9196832,GSE293970,GSE293970,Conversion of Th17 into exTh17 sustains rheumatoid-like IL-17-independent inflammatory arthritis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,,primary tissue,MONDO:0005578,arthritic joint disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21477,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000093021332892,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41202149,,GSM9196832,,,val,sda-all,samples/GSE293970/GSM9196832,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8896252,GSE294006,GSE294006,Hypoxia shapes both therapeutic response and resistance in metastatic clear cell renal cell carcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Primary Tumor,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,,,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4749,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.509809912214167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42242232,,GSM8896252,,,train,sda-all,samples/GSE294006/GSM8896252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8896253,GSE294006,GSE294006,Hypoxia shapes both therapeutic response and resistance in metastatic clear cell renal cell carcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Primary Tumor,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,,,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4660,17943,counts,um,1.0,verified,True,H&E-like (heuristic),5.147004625833908,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42242232,,GSM8896253,,,train,sda-all,samples/GSE294006/GSM8896253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8896254,GSE294006,GSE294006,Hypoxia shapes both therapeutic response and resistance in metastatic clear cell renal cell carcinoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Primary Tumor,tumour tissue,MONDO:0005005,clear cell renal carcinoma,disease,luna,,,adult,luna,adult,,male,extracted field,M,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4174,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.903950815218669,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42242232,,GSM8896254,,,train,sda-all,samples/GSE294006/GSM8896254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8898654,GSE294097,GSE294097,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005574,tauopathy,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,3971,25417,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8898654,,,val,sda-all,samples/GSE294097/GSM8898654,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8898655,GSE294097,GSE294097,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,6764,26462,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8898655,,,val,sda-all,samples/GSE294097/GSM8898655,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8898656,GSE294097,GSE294097,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005574,tauopathy,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,6663,25287,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8898656,,,val,sda-all,samples/GSE294097/GSM8898656,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8898657,GSE294097,GSE294097,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,5609,25973,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8898657,,,val,sda-all,samples/GSE294097/GSM8898657,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8898959,GSE294120,GSE294120,Study on the Effects of Retinoids on UVR-Induced Skin Photoaging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,"UVR skin of SKH-1 mice (upper), and normal skin of SKH-1 mice (lower)",adult,age rule: age with unit,not stated,10–12 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1404,19465,counts,pixel,6.109423838294563,platform_constant,True,H&E,6.109423838294563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41644086,,GSM8898959,,,val,hesrt,samples/GSE294120/GSM8898959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.51, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8898960,GSE294120,GSE294120,Study on the Effects of Retinoids on UVR-Induced Skin Photoaging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,perturbation,luna,,"UVR and treated with 0.1% Retinol skin of SKH-1 mice (upper), UVR and treated with 0.03% 9-cis HPR skin of SKH-1 mice (lower)",adult,age rule: age with unit,not stated,10–12 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1771,19465,counts,pixel,5.021750002741895,platform_constant,True,H&E,5.021750002741895,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41644086,,GSM8898960,,,val,hesrt,samples/GSE294120/GSM8898960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8900422,GSE294212,GSE294212,The essential role of connective-tissue cells during axolotl limb regeneration,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002102,forelimb,15 micrometer cryosection from whole forelimb,primary tissue,,,normal,luna,,0 (Mature limb),adult,luna,adult,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64426,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999448397595014,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900422,,,train,sda-all,samples/GSE294212/GSM8900422,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM8900423,GSE294212,GSE294212,The essential role of connective-tissue cells during axolotl limb regeneration,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002472,stylopod,15 micrometer cryosection from whole stylopod,primary tissue,,,perturbation,luna,,3 dpa,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12823,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012903891814,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900423,,,train,sda-all,samples/GSE294212/GSM8900423,sda-tissue-disease-2.4,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.87}",organ,low_confidence_annotation
GSM8900424,GSE294212,GSE294212,The essential role of connective-tissue cells during axolotl limb regeneration,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002472,stylopod,15 micrometer cryosection from whole stylopod,primary tissue,,,perturbation,luna,,5 dpa,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5869,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051303098707,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900424,,,train,sda-all,samples/GSE294212/GSM8900424,sda-tissue-disease-2.4,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.87}",organ,low_confidence_annotation
GSM8900425,GSE294212,GSE294212,The essential role of connective-tissue cells during axolotl limb regeneration,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002472,stylopod,15 micrometer cryosection from whole stylopod,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17002,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500003759681179,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900425,,,train,sda-all,samples/GSE294212/GSM8900425,sda-tissue-disease-2.4,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8900426,GSE294212,GSE294212,The essential role of connective-tissue cells during axolotl limb regeneration,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002472,stylopod,15 micrometer cryosection from whole stylopod,primary tissue,,,perturbation,luna,,10 dpa,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5400,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999589827727645,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900426,,,train,sda-all,samples/GSE294212/GSM8900426,sda-tissue-disease-2.4,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8900427,GSE294212,GSE294212,The essential role of connective-tissue cells during axolotl limb regeneration,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002472,stylopod,15 micrometer cryosection from whole stylopod,primary tissue,,,perturbation,luna,,14 dpa,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13166,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999226086059223,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900427,,,train,sda-all,samples/GSE294212/GSM8900427,sda-tissue-disease-2.4,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",organ,low_confidence_annotation
GSM8900554,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Naïve,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1992,57010,counts,pixel,4.225625123768563,platform_constant,True,H&E,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900554,,,train,hesrt,samples/GSE294222/GSM8900554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8900555,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Naïve,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2614,57010,counts,pixel,4.2385592182814165,platform_constant,True,H&E,4.2385592182814165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900555,,,train,hesrt,samples/GSE294222/GSM8900555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900556,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,Vaccinated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2013,57010,counts,pixel,4.225625123768563,platform_constant,True,H&E,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900556,,,train,hesrt,samples/GSE294222/GSM8900556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900557,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,Vaccinated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2676,57010,counts,pixel,4.225625123768563,platform_constant,True,H&E,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900557,,,train,hesrt,samples/GSE294222/GSM8900557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8900558,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Naïve,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1629,57010,counts,pixel,4.225625123768563,platform_constant,True,H&E,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900558,,,train,hesrt,samples/GSE294222/GSM8900558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900559,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Naïve,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2054,57010,counts,pixel,4.2385592182814165,platform_constant,True,H&E,4.2385592182814165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900559,,,train,hesrt,samples/GSE294222/GSM8900559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900560,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,Vaccinated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1722,57010,counts,pixel,4.225625123768563,platform_constant,True,H&E,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900560,,,train,hesrt,samples/GSE294222/GSM8900560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900561,GSE294222,GSE294222,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,Vaccinated,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2881,57010,counts,pixel,4.225625123768563,platform_constant,True,H&E,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900561,,,train,hesrt,samples/GSE294222/GSM8900561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900775,GSE294237,GSE294237,Single-Cell Multimodal Profiling Highlights Persistent Aortic Smooth Muscle Cell Changes in Diabetic Mice Despite Glycemic Control,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0000947,aorta,Aorta tissue,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,either saline or DAPA,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17160,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999390689739215,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41641545,,GSM8900775,,,test,sda-all,samples/GSE294237/GSM8900775,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9262941,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,,,disease,luna,FAI,FAI,not stated,luna,not stated,,unknown,not stated,,GSE294277:FAI patient #1,FAI patient #1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1876,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262941,,,test,hesrt,samples/GSE294277/GSM9262941,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 0.54, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;sample_kind,low_confidence_annotation
GSM9262942,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,,,disease,luna,FAI,FAI,not stated,luna,not stated,,unknown,not stated,,GSE294277:FAI patient #2,FAI patient #2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1766,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262942,,,test,hesrt,samples/GSE294277/GSM9262942,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262943,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,,,disease,luna,FAI,FAI,not stated,luna,not stated,,unknown,not stated,,GSE294277:FAI patient #5,FAI patient #5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2721,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262943,,,test,hesrt,samples/GSE294277/GSM9262943,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.78, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262944,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,,,disease,luna,FAI,FAI,not stated,luna,not stated,,unknown,not stated,,GSE294277:FAI patient #6,FAI patient #6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2102,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262944,,,test,hesrt,samples/GSE294277/GSM9262944,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9262945,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,hip OA,hip OA,not stated,luna,not stated,,unknown,not stated,,GSE294277:OA patient #1,OA patient #1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1510,17943,counts,pixel,4.563782286098332,platform_constant,True,H&E,4.563782286098332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262945,,,test,hesrt,samples/GSE294277/GSM9262945,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262946,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,hip OA,hip OA,not stated,luna,not stated,,unknown,not stated,,GSE294277:OA patient #2,OA patient #2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3143,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262946,,,test,hesrt,samples/GSE294277/GSM9262946,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9262947,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,hip OA,hip OA,not stated,luna,not stated,,unknown,not stated,,GSE294277:OA patient #3,OA patient #3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1478,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262947,,,test,hesrt,samples/GSE294277/GSM9262947,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.89, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262948,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,hip OA,hip OA,not stated,luna,not stated,,unknown,not stated,,GSE294277:OA patient #4,OA patient #4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1838,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262948,,,test,hesrt,samples/GSE294277/GSM9262948,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262949,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,hip OA,hip OA,not stated,luna,not stated,,unknown,not stated,,GSE294277:OA patient #5,OA patient #5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2858,17943,counts,pixel,3.9968038348871575,platform_constant,True,H&E,3.9968038348871575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262949,,,test,hesrt,samples/GSE294277/GSM9262949,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262950,GSE294277,GSE294277,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0005178,osteoarthritis,disease,luna,hip OA,hip OA,not stated,luna,not stated,,unknown,not stated,,GSE294277:OA patient #6,OA patient #6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3953,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262950,,,test,hesrt,samples/GSE294277/GSM9262950,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8903657,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3576,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.573433093701535,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903657,,,train,sda-all,samples/GSE294385/GSM8903657,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903658,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3244,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.1978525082560445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903658,,,train,sda-all,samples/GSE294385/GSM8903658,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903659,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3204,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.9001319356993984,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903659,,,train,sda-all,samples/GSE294385/GSM8903659,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903660,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8621,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.836118386919609,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903660,,,train,sda-all,samples/GSE294385/GSM8903660,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903661,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10286,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.827686167952177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903661,,,train,sda-all,samples/GSE294385/GSM8903661,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903662,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8219,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.146381265065446,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903662,,,train,sda-all,samples/GSE294385/GSM8903662,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903663,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12266,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.0121420651635455,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903663,,,train,sda-all,samples/GSE294385/GSM8903663,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903664,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11406,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.566735750760095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903664,,,train,sda-all,samples/GSE294385/GSM8903664,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903665,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6746,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.129020729416923,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903665,,,train,sda-all,samples/GSE294385/GSM8903665,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903666,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8774,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.7260613435158145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903666,,,train,sda-all,samples/GSE294385/GSM8903666,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903667,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3398,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.746976137153565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903667,,,train,sda-all,samples/GSE294385/GSM8903667,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903668,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7746,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.289740530581422,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903668,,,train,sda-all,samples/GSE294385/GSM8903668,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903669,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10148,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.820624938205231,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903669,,,train,sda-all,samples/GSE294385/GSM8903669,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903670,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9530,18085,counts,um,1.0,verified,True,H&E-like (heuristic),8.66421621194855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903670,,,train,sda-all,samples/GSE294385/GSM8903670,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903671,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7583,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.778584452810203,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903671,,,train,sda-all,samples/GSE294385/GSM8903671,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903672,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13339,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.631562515009119,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903672,,,train,sda-all,samples/GSE294385/GSM8903672,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903673,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11308,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.728013232905372,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903673,,,train,sda-all,samples/GSE294385/GSM8903673,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903674,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13166,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.8395679702410135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903674,,,train,sda-all,samples/GSE294385/GSM8903674,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903675,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8105,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.206121482486316,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903675,,,train,sda-all,samples/GSE294385/GSM8903675,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903676,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9380,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.660655844236255,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903676,,,train,sda-all,samples/GSE294385/GSM8903676,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903677,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12749,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.886075711320694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903677,,,train,sda-all,samples/GSE294385/GSM8903677,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903678,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10720,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.181607687204638,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903678,,,train,sda-all,samples/GSE294385/GSM8903678,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903679,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8459,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.483766818749287,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903679,,,train,sda-all,samples/GSE294385/GSM8903679,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903680,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13790,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.903757018975338,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903680,,,train,sda-all,samples/GSE294385/GSM8903680,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903681,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11911,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.294745267766111,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903681,,,train,sda-all,samples/GSE294385/GSM8903681,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903682,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12528,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.354309247181917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903682,,,train,sda-all,samples/GSE294385/GSM8903682,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903683,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11599,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.149834790894239,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903683,,,train,sda-all,samples/GSE294385/GSM8903683,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903684,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10876,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.2849113187362935,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903684,,,train,sda-all,samples/GSE294385/GSM8903684,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903685,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6240,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.044379100047982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903685,,,train,sda-all,samples/GSE294385/GSM8903685,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903686,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4330,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.555858683174352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903686,,,train,sda-all,samples/GSE294385/GSM8903686,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903687,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7238,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.13774628043069,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903687,,,train,sda-all,samples/GSE294385/GSM8903687,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903688,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10801,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.331392848639144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903688,,,train,sda-all,samples/GSE294385/GSM8903688,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903689,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7392,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.166340602495027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903689,,,train,sda-all,samples/GSE294385/GSM8903689,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903690,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12833,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.218115440503206,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903690,,,train,sda-all,samples/GSE294385/GSM8903690,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903691,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13565,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.669268793912246,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903691,,,train,sda-all,samples/GSE294385/GSM8903691,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903692,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12896,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.988937498127474,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903692,,,train,sda-all,samples/GSE294385/GSM8903692,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903693,GSE294385,GSE294385,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Colorectal cancer metastasis,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13076,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.488155850595187,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903693,,,train,sda-all,samples/GSE294385/GSM8903693,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903809,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,906,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.017180199611666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903809,,,val,sda-all,samples/GSE294392/GSM8903809,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM8903810,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,787,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.4919079102227,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903810,,,val,sda-all,samples/GSE294392/GSM8903810,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM8903811,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,743,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.611185211766063,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903811,,,val,sda-all,samples/GSE294392/GSM8903811,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.24}",life_stage,low_confidence_annotation
GSM8903812,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,884,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.642198156631606,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903812,,,val,sda-all,samples/GSE294392/GSM8903812,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8903813,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1244,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.649162398599134,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903813,,,val,sda-all,samples/GSE294392/GSM8903813,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.15}",life_stage,low_confidence_annotation
GSM8903814,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1829,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.490468457837124,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903814,,,val,sda-all,samples/GSE294392/GSM8903814,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM8903816,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1443,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.646359715794956,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903816,,,val,sda-all,samples/GSE294392/GSM8903816,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8903817,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2025,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.0333426748598615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903817,,,val,sda-all,samples/GSE294392/GSM8903817,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.24}",life_stage,low_confidence_annotation
GSM8903818,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2022,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.51680683424508,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903818,,,val,sda-all,samples/GSE294392/GSM8903818,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM8903819,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2049,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.523871065508794,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903819,,,val,sda-all,samples/GSE294392/GSM8903819,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.25}",life_stage,low_confidence_annotation
GSM8903820,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2074,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.518107105712145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903820,,,val,sda-all,samples/GSE294392/GSM8903820,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.19}",life_stage,low_confidence_annotation
GSM8903821,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2155,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.652865922380966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903821,,,val,sda-all,samples/GSE294392/GSM8903821,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.18}",life_stage,low_confidence_annotation
GSM8903822,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1794,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.483905216206264,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903822,,,val,sda-all,samples/GSE294392/GSM8903822,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8903823,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2194,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.6244451291655855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903823,,,val,sda-all,samples/GSE294392/GSM8903823,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.16}",life_stage,low_confidence_annotation
GSM8903824,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,caryopsis,primary tissue,,,normal,luna,,La Trobe,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2174,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.652045023563039,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903824,,,val,sda-all,samples/GSE294392/GSM8903824,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8903825,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1012,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.646846400722763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903825,,,val,sda-all,samples/GSE294392/GSM8903825,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8903826,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,960,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.483017920270224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903826,,,val,sda-all,samples/GSE294392/GSM8903826,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8903827,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1043,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.61044179666421,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903827,,,val,sda-all,samples/GSE294392/GSM8903827,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8903828,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1091,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.651653979097096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903828,,,val,sda-all,samples/GSE294392/GSM8903828,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8903829,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1374,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.647734718350966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903829,,,val,sda-all,samples/GSE294392/GSM8903829,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": NaN, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM8903830,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1197,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.487944106532824,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903830,,,val,sda-all,samples/GSE294392/GSM8903830,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": NaN, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8903831,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1161,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.615414257718301,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903831,,,val,sda-all,samples/GSE294392/GSM8903831,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8903832,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1161,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.643690169457632,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903832,,,val,sda-all,samples/GSE294392/GSM8903832,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8903833,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1108,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.650051162167748,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903833,,,val,sda-all,samples/GSE294392/GSM8903833,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM8903834,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1066,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.4933443460517495,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903834,,,val,sda-all,samples/GSE294392/GSM8903834,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": NaN, ""life_stage"": 0.63}",,
GSM8903835,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1092,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.611585795672573,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903835,,,val,sda-all,samples/GSE294392/GSM8903835,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8903836,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1058,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.646338478914383,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903836,,,val,sda-all,samples/GSE294392/GSM8903836,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8903837,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1099,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.649291198550399,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903837,,,val,sda-all,samples/GSE294392/GSM8903837,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8903838,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1146,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.484362750461965,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903838,,,val,sda-all,samples/GSE294392/GSM8903838,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8903839,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1173,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.60978398224168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903839,,,val,sda-all,samples/GSE294392/GSM8903839,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8903840,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1144,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.640111301782538,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903840,,,val,sda-all,samples/GSE294392/GSM8903840,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8903841,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1281,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.002757907010215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903841,,,val,sda-all,samples/GSE294392/GSM8903841,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": NaN, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8903842,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1192,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.9720979274481767,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903842,,,val,sda-all,samples/GSE294392/GSM8903842,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8903843,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1274,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.016424434103623,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903843,,,val,sda-all,samples/GSE294392/GSM8903843,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8903844,GSE294392,GSE294392,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,Hordeum vulgare,4513,barley,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,plant,luna,,,grain,primary tissue,,,normal,luna,,La Trobe,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1209,43050,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.979310466432978,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903844,,,val,sda-all,samples/GSE294392/GSM8903844,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8905380,GSE294442,GSE294442,Bioengineered 3D human heart valve tissues with enhanced maturational properties for disease modelling and therapeutic applications [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0003978,valve,valve engineered tissue,engineered tissue,,,perturbation,luna,,"+/- IL-6, IL-8, TNFα",not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereoseq,,,bin,8531,18346,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8905380,,,train,sda-all,samples/GSE294442/GSM8905380,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.8300000000000001, ""life_stage"": 0.99}",,
GSM8907602,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,10074,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907602,,,train,sda-all,samples/GSE294466/GSM8907602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907603,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,9829,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907603,,,train,sda-all,samples/GSE294466/GSM8907603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8907604,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,6576,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907604,,,train,sda-all,samples/GSE294466/GSM8907604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907605,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,6342,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907605,,,train,sda-all,samples/GSE294466/GSM8907605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907606,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,20537,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999585772672045,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907606,,,train,sda-all,samples/GSE294466/GSM8907606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907607,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,21723,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000133041627247,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907607,,,train,sda-all,samples/GSE294466/GSM8907607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907608,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,6665,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999352599958563,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907608,,,train,sda-all,samples/GSE294466/GSM8907608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907609,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,6776,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097145225636,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907609,,,train,sda-all,samples/GSE294466/GSM8907609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907610,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,12829,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000124120810923,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907610,,,train,sda-all,samples/GSE294466/GSM8907610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907611,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,11521,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999844797616091,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907611,,,train,sda-all,samples/GSE294466/GSM8907611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907612,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,10396,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000185935046689,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907612,,,train,sda-all,samples/GSE294466/GSM8907612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907613,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,9878,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907613,,,train,sda-all,samples/GSE294466/GSM8907613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8907614,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,26134,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068961712457,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907614,,,train,sda-all,samples/GSE294466/GSM8907614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907615,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,25207,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999931034482753,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907615,,,train,sda-all,samples/GSE294466/GSM8907615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907616,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,19853,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999173143707626,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907616,,,train,sda-all,samples/GSE294466/GSM8907616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907617,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,18784,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998553121124434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907617,,,train,sda-all,samples/GSE294466/GSM8907617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8907618,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient5,Patient5,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,30205,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999915438965724,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907618,,,train,sda-all,samples/GSE294466/GSM8907618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907619,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient5,Patient5,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,30228,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000075165363801,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907619,,,train,sda-all,samples/GSE294466/GSM8907619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907620,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient6,Patient6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,35183,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000178504321684,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907620,,,train,sda-all,samples/GSE294466/GSM8907620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8907621,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient6,Patient6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,34998,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999803881090008,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907621,,,train,sda-all,samples/GSE294466/GSM8907621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907622,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient7,Patient7,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,14547,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000122125356982,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907622,,,train,sda-all,samples/GSE294466/GSM8907622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8907623,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient7,Patient7,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,14638,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000169071235347,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907623,,,train,sda-all,samples/GSE294466/GSM8907623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907624,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient8,Patient8,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,24028,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999482309785814,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907624,,,train,sda-all,samples/GSE294466/GSM8907624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907625,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient8,Patient8,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,24963,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999933463449254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907625,,,train,sda-all,samples/GSE294466/GSM8907625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907626,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient9,Patient9,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,49626,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999933463449254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907626,,,train,sda-all,samples/GSE294466/GSM8907626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907627,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient9,Patient9,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,48629,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999977819837937,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907627,,,train,sda-all,samples/GSE294466/GSM8907627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907628,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient10,Patient10,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,16043,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998873281754674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907628,,,train,sda-all,samples/GSE294466/GSM8907628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907629,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient10,Patient10,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,16496,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000169071235347,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907629,,,train,sda-all,samples/GSE294466/GSM8907629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907630,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient11,Patient11,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,16417,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999770768384375,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907630,,,train,sda-all,samples/GSE294466/GSM8907630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8907631,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient11,Patient11,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,15532,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965615257656,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907631,,,train,sda-all,samples/GSE294466/GSM8907631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907632,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient12,Patient12,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,31728,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051754476762,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907632,,,train,sda-all,samples/GSE294466/GSM8907632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907633,GSE294466,GSE294466,Xenium spatial transcriptomics of human carotid artery plaques,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0005396,carotid artery segment,human carotid artery tissue,primary tissue,,,disease,luna,,Plaque,not stated,luna,not stated,,unknown,not stated,,GSE294466:Patient12,Patient12,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,32663,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499998620917917,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907633,,,train,sda-all,samples/GSE294466/GSM8907633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907699,GSE294469,GSE294469,Spatially organized progenitors in the zebrafish heart field determine cardiovascular patterning [MERFISH],Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,22482,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41290702,,GSM8907699,,,train,sda-all,samples/GSE294469/GSM8907699,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.63, ""disease_status"": 0.48, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8907700,GSE294469,GSE294469,Spatially organized progenitors in the zebrafish heart field determine cardiovascular patterning [MERFISH],Danio rerio,7955,zebrafish,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,embryo (whole),luna,UBERON:0000922,embryo,embryo,whole embryo/organism,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,13298,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41290702,,GSM8907700,,,train,sda-all,samples/GSE294469/GSM8907700,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 0.61, ""disease_status"": 0.39, ""uberon"": 0.65, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8915488,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,chronic pancreatitis,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2567,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915488,,,test,hesrt,samples/GSE294669/GSM8915488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915489,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1645,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915489,,,test,hesrt,samples/GSE294669/GSM8915489,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915490,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,pancreatic intraepithelial neoplasia,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1873,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915490,,,test,hesrt,samples/GSE294669/GSM8915490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915491,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,pancreatic ductal adenocarcinoma,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2822,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915491,,,test,hesrt,samples/GSE294669/GSM8915491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915492,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2889,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915492,,,test,hesrt,samples/GSE294669/GSM8915492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915493,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,pancreatic ductal adenocarcinoma,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2847,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915493,,,test,hesrt,samples/GSE294669/GSM8915493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915494,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,chronic pancreatitis,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2791,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915494,,,test,hesrt,samples/GSE294669/GSM8915494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915495,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2156,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915495,,,test,hesrt,samples/GSE294669/GSM8915495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915496,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,pancreatic ductal adenocarcinoma,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3088,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915496,,,test,hesrt,samples/GSE294669/GSM8915496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915497,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,pancreatic ductal adenocarcinoma,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1142,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915497,,,test,hesrt,samples/GSE294669/GSM8915497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915498,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,chronic pancreatitis,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2397,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915498,,,test,hesrt,samples/GSE294669/GSM8915498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915499,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2857,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915499,,,test,hesrt,samples/GSE294669/GSM8915499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915500,GSE294669,GSE294669,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005184;MONDO:0005003;MONDO:0024474,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,disease,luna,pancreatic ductal adenocarcinoma,treatment naive,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3009,17943,counts,pixel,6.757894731435813,platform_constant,True,H&E,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915500,,,test,hesrt,samples/GSE294669/GSM8915500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8919109,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,luna,UBERON:0000033,head,head tissue,primary tissue,,,normal,luna,,Wild-type,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,19223,33379,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919109,,,train,sda-all,samples/GSE294759/GSM8919109,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8919110,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,heart tissue,primary tissue,,,normal,luna,,Wild-type,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,39019,30094,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919110,,,train,sda-all,samples/GSE294759/GSM8919110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8919111,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,brain organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,7900,35179,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919111,,,train,sda-all,samples/GSE294759/GSM8919111,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM8919112,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,cartilage,luna,UBERON:0002418,cartilage tissue,cartilage organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,22455,36819,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919112,,,train,sda-all,samples/GSE294759/GSM8919112,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8919113,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,4451,30262,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919113,,,train,sda-all,samples/GSE294759/GSM8919113,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.62, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8919114,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0000948,heart,heart organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,11436,35441,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919114,,,train,sda-all,samples/GSE294759/GSM8919114,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8919115,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000178,blood,blood organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,167384,44896,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919115,,,train,sda-all,samples/GSE294759/GSM8919115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.15, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8919116,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0003978,valve,valve organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,160793,31202,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919116,,,train,sda-all,samples/GSE294759/GSM8919116,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8919117,GSE294759,GSE294759,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,129435,37052,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919117,,,train,sda-all,samples/GSE294759/GSM8919117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8919242,GSE294765,GSE294765,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0011905,plantaris,plantaris muscle,primary tissue,,,perturbation,luna,,7d post-denervation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1030,32285,counts,um,1.0,verified,True,H&E,4.133744305099287,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919242,,,train,sda-all,samples/GSE294765/GSM8919242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8919243,GSE294765,GSE294765,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0011905,plantaris,plantaris muscle,primary tissue,,,perturbation,luna,,7d post-denervation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1062,32285,counts,um,1.0,verified,True,H&E,4.132071264632023,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919243,,,train,sda-all,samples/GSE294765/GSM8919243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8919244,GSE294765,GSE294765,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0011905,plantaris,plantaris muscle,primary tissue,,,normal,luna,,sham/basal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1068,32285,counts,um,1.0,verified,True,H&E,4.1325654264213,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919244,,,train,sda-all,samples/GSE294765/GSM8919244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8919245,GSE294765,GSE294765,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0011905,plantaris,plantaris muscle,primary tissue,,,normal,luna,,sham/basal,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1286,32285,counts,um,1.0,verified,True,H&E,4.131458787906672,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919245,,,train,sda-all,samples/GSE294765/GSM8919245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8919246,GSE294765,GSE294765,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0011905,plantaris,plantaris muscle,primary tissue,,,perturbation,luna,,7d post-overloading,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1311,32285,counts,um,1.0,verified,True,H&E,4.141620034561607,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919246,,,train,sda-all,samples/GSE294765/GSM8919246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8919247,GSE294765,GSE294765,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0011905,plantaris,plantaris muscle,primary tissue,,,perturbation,luna,,7d post-overloading,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1169,32285,counts,um,1.0,verified,True,H&E,4.140916120598785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919247,,,train,sda-all,samples/GSE294765/GSM8919247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8921746,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2485,69648,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921746,,,val,sda-all,samples/GSE294814/GSM8921746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921747,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2488,72145,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921747,,,val,sda-all,samples/GSE294814/GSM8921747,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921748,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2496,23585,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921748,,,val,sda-all,samples/GSE294814/GSM8921748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8921749,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2500,67115,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921749,,,val,sda-all,samples/GSE294814/GSM8921749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921750,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,intestine,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2500,28198,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921750,,,val,sda-all,samples/GSE294814/GSM8921750,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8921752,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2498,35188,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921752,,,val,sda-all,samples/GSE294814/GSM8921752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921753,GSE294814,GSE294814,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,release v3,microDBiT,sequencing-based,microDBiT,,,spot,2493,44662,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8921753,,,val,sda-all,samples/GSE294814/GSM8921753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8925216,GSE294844,GSE294844,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005173,actinic keratosis,disease,manual,actinic keratosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,1435,18085,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925216,,,test,hesrt,samples/GSE294844/GSM8925216,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM8925217,GSE294844,GSE294844,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005173,actinic keratosis,disease,manual,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1505,18085,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8925217,,,test,sda-all,samples/GSE294844/GSM8925217,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8925218,GSE294844,GSE294844,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005173,actinic keratosis,disease,manual,actinic keratosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,1706,18085,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925218,,,test,hesrt,samples/GSE294844/GSM8925218,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.5700000000000001, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8925219,GSE294844,GSE294844,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005173,actinic keratosis,disease,manual,actinic keratosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,921,18085,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925219,,,test,hesrt,samples/GSE294844/GSM8925219,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8925221,GSE294844,GSE294844,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005173,actinic keratosis,disease,manual,actinic keratosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium CytAssist,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,2289,18085,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925221,,,test,hesrt,samples/GSE294844/GSM8925221,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.46, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8933087,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,435381,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000109841827768,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933087,,,train,sda-all,samples/GSE294965/GSM8933087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933088,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,412356,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998908138011355,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933088,,,train,sda-all,samples/GSE294965/GSM8933088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8933089,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,351827,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999756465832157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933089,,,train,sda-all,samples/GSE294965/GSM8933089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933090,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,441503,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999106062273085,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933090,,,train,sda-all,samples/GSE294965/GSM8933090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8933091,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,339498,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012167226359,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933091,,,train,sda-all,samples/GSE294965/GSM8933091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933092,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,334451,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999032208113964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933092,,,train,sda-all,samples/GSE294965/GSM8933092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8933093,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,317414,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40393992,10.1101/2024.12.18.629206,GSM8933093,,,train,hesrt,samples/GSE294965/GSM8933093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933094,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,481717,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000032303080423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933094,,,train,sda-all,samples/GSE294965/GSM8933094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933095,GSE294965,GSE294965,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,307653,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000115027146407,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933095,,,train,sda-all,samples/GSE294965/GSM8933095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8941069,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D10,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1980,19465,counts,pixel,4.847669641121826,platform_constant,True,H&E,4.847669641121826,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941069,,,train,hesrt,samples/GSE295043/GSM8941069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8941070,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D10,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2385,19465,counts,pixel,4.748466199167602,platform_constant,True,H&E,4.748466199167602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941070,,,train,hesrt,samples/GSE295043/GSM8941070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8941071,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D10,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2363,19465,counts,pixel,4.806746504007534,platform_constant,True,H&E,4.806746504007534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941071,,,train,hesrt,samples/GSE295043/GSM8941071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8941072,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D10,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1751,19465,counts,pixel,4.806746504007534,platform_constant,True,H&E,4.806746504007534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941072,,,train,hesrt,samples/GSE295043/GSM8941072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8941073,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D20,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1185,19465,counts,pixel,4.832900309726584,platform_constant,True,H&E,4.832900309726584,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941073,,,train,hesrt,samples/GSE295043/GSM8941073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8941074,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D20,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2222,19465,counts,pixel,4.70028528954115,platform_constant,True,H&E,4.70028528954115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941074,,,train,hesrt,samples/GSE295043/GSM8941074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8941075,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D20,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1693,19465,counts,pixel,4.8483700083584464,platform_constant,True,H&E,4.8483700083584464,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941075,,,train,hesrt,samples/GSE295043/GSM8941075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8941076,GSE295043,GSE295043,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,primary tissue,,,perturbation,luna,,Castracted D20,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1860,19465,counts,pixel,4.7223041042987886,platform_constant,True,H&E,4.7223041042987886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941076,,,train,hesrt,samples/GSE295043/GSM8941076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8941355,GSE295060,GSE295060,Gain-of-function PPM1D mutations attenuate ischemic stroke,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000944;MONDO:1060198,cerebral artery occlusion;ischemic stroke,disease,luna,ischemic stroke,Ppm1d knockdown; middle cerebral artery occlusion (MCAO) model induction,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2842,31053,counts,pixel,4.018033141677578,platform_constant,True,H&E,4.018033141677578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8941355,,,train,hesrt,samples/GSE295060/GSM8941355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8941356,GSE295060,GSE295060,Gain-of-function PPM1D mutations attenuate ischemic stroke,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000944;MONDO:1060198,cerebral artery occlusion;ischemic stroke,disease,luna,ischemic stroke,Wild-type; middle cerebral artery occlusion (MCAO) model induction,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2846,31053,counts,pixel,4.007650296628716,platform_constant,True,H&E,4.007650296628716,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8941356,,,train,hesrt,samples/GSE295060/GSM8941356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8941357,GSE295061,GSE295061,Utx (Kdm6a) promotes differentiation non-catalytically in somatic self-renewing epithelia [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,40371,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000091352009742,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40372430,,GSM8941357,,,train,sda-all,samples/GSE295061/GSM8941357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.31, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8941358,GSE295061,GSE295061,Utx (Kdm6a) promotes differentiation non-catalytically in somatic self-renewing epithelia [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52308,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999882739212007,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40372430,,GSM8941358,,,train,sda-all,samples/GSE295061/GSM8941358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8943583,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1753,58288,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49998955888326974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943583,,,train,hesrt,samples/GSE295206/GSM8943583,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943584,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2087,58288,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49998955888326974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943584,,,train,hesrt,samples/GSE295206/GSM8943584,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943585,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3526,36601,counts,pixel,1.3888888888888888,platform_constant,True,H&E,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943585,,,train,hesrt,samples/GSE295206/GSM8943585,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943586,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3586,36601,counts,pixel,1.3888888888888888,platform_constant,True,H&E,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943586,,,train,hesrt,samples/GSE295206/GSM8943586,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943587,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1967,36601,counts,pixel,1.3888888888888888,platform_constant,True,H&E,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943587,,,train,hesrt,samples/GSE295206/GSM8943587,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943588,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2911,36601,counts,pixel,1.3888888888888888,platform_constant,True,H&E,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943588,,,train,hesrt,samples/GSE295206/GSM8943588,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943589,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3535,36601,counts,pixel,1.3888888888888888,platform_constant,True,H&E,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943589,,,train,hesrt,samples/GSE295206/GSM8943589,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943590,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3396,36601,counts,pixel,1.3888888888888888,platform_constant,True,H&E,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943590,,,train,hesrt,samples/GSE295206/GSM8943590,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943591,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2701,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.4999957162054191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943591,,,train,hesrt,samples/GSE295206/GSM8943591,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943592,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2412,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.4999997784474572,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943592,,,train,hesrt,samples/GSE295206/GSM8943592,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943593,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2833,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49999468750110676,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943593,,,train,hesrt,samples/GSE295206/GSM8943593,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943594,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3089,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49999099525829827,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943594,,,train,hesrt,samples/GSE295206/GSM8943594,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943595,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3273,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49998779411062594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943595,,,train,hesrt,samples/GSE295206/GSM8943595,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943596,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3987,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49999824176442453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943596,,,train,hesrt,samples/GSE295206/GSM8943596,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943597,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3315,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.49998779411062594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943597,,,train,hesrt,samples/GSE295206/GSM8943597,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943598,GSE295206,GSE295206,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3907,36601,counts,pixel,0.3460207612456747,platform_constant,True,H&E,0.5000053563585332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943598,,,train,hesrt,samples/GSE295206/GSM8943598,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8944108,GSE295237,GSE295237,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,"temporal neocortex,nonepileptic",primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4185,33538,counts,um,1.0,verified,True,H&E,3.9674883836863017,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944108,,,train,sda-all,samples/GSE295237/GSM8944108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8944109,GSE295237,GSE295237,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,"temporal neocortex,nonepileptic",primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4338,33538,counts,um,1.0,verified,True,H&E,3.987701931773198,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944109,,,train,sda-all,samples/GSE295237/GSM8944109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8944110,GSE295237,GSE295237,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,"temporal neocortex,epileptogenic",primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2571,33538,counts,um,1.0,verified,True,H&E,4.065557313238917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944110,,,train,sda-all,samples/GSE295237/GSM8944110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8944111,GSE295237,GSE295237,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016538,temporal cortex,"temporal neocortex,epileptogenic",primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2709,33538,counts,um,1.0,verified,True,H&E,3.9876324666462875,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944111,,,train,sda-all,samples/GSE295237/GSM8944111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684470,GSE295275,GSE295275,"Genomic and transcriptomic feature of HBV integration in treatment-naïve, HBeAg-positive children with chronic HBV infection",Homo sapiens,9606,human,Homo sapiens,9606,Hepatitis B virus,False,False,GEO lists only a non-host organism; host from the features' Ensembl gene IDs,Hepatitis B virus,Homo sapiens,liver,luna,UBERON:0002107,liver,liver tissue,primary tissue,MONDO:0005550,infectious disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,999,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.409785507339969,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9684470,,,val,sda-all,samples/GSE295275/GSM9684470,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9684471,GSE295275,GSE295275,"Genomic and transcriptomic feature of HBV integration in treatment-naïve, HBeAg-positive children with chronic HBV infection",Homo sapiens,9606,human,Homo sapiens,9606,Hepatitis B virus,False,False,GEO lists only a non-host organism; host from the features' Ensembl gene IDs,Hepatitis B virus,Homo sapiens,liver,luna,UBERON:0002107,liver,liver tissue,primary tissue,MONDO:0005550,infectious disease,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,822,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.408772131960675,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9684471,,,val,sda-all,samples/GSE295275/GSM9684471,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8953673,GSE295606,GSE295606,Dermal adipocytes activate hair follicle stem cells through metabolic communication [SP],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,676589,32285,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41130201,,GSM8953673,,,train,sda-all,samples/GSE295606/GSM8953673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM8953674,GSE295606,GSE295606,Dermal adipocytes activate hair follicle stem cells through metabolic communication [SP],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,Skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,662864,32285,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41130201,,GSM8953674,,,train,sda-all,samples/GSE295606/GSM8953674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.35000000000000003, ""life_stage"": 0.89}",disease_status;uberon,low_confidence_annotation
GSM8953773,GSE295619,GSE295619,"Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics, part 2)",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2195,17943,counts,pixel,4.793297366107948,platform_constant,True,H&E,4.793297366107948,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8953773,,,train,hesrt,samples/GSE295619/GSM8953773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8953774,GSE295619,GSE295619,"Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics, part 2)",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0002771,pulmonary fibrosis,disease,luna,pulmonary fibrosis,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2607,17943,counts,pixel,4.798295640664582,platform_constant,True,H&E,4.798295640664582,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8953774,,,train,hesrt,samples/GSE295619/GSM8953774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956239,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,68273,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500010350742296,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956239,,,train,sda-all,samples/GSE295730/GSM8956239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956240,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,101272,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999883510225213,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956240,,,train,sda-all,samples/GSE295730/GSM8956240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956241,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,109734,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999909420289855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956241,,,train,sda-all,samples/GSE295730/GSM8956241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956242,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,94906,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103528242504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956242,,,train,sda-all,samples/GSE295730/GSM8956242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956243,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,106573,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998619852048143,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956243,,,train,sda-all,samples/GSE295730/GSM8956243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956244,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,105300,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999922336129233,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956244,,,train,sda-all,samples/GSE295730/GSM8956244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956245,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,102812,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999547007662043,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956245,,,train,sda-all,samples/GSE295730/GSM8956245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956246,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,89177,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999979297780722,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956246,,,train,sda-all,samples/GSE295730/GSM8956246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956247,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,92567,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999447879858655,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956247,,,train,sda-all,samples/GSE295730/GSM8956247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956248,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,97669,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999935283458447,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956248,,,train,sda-all,samples/GSE295730/GSM8956248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956249,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,151579,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500002760905577,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956249,,,train,sda-all,samples/GSE295730/GSM8956249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956250,GSE295730,GSE295730,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,94784,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999922336129233,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956250,,,train,sda-all,samples/GSE295730/GSM8956250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8958026,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,normal,luna,,wildtype,embryonic,age rule: embryonic day,embryonic,E12.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,11578,31170,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958026,,,train,sda-all,samples/GSE295815/GSM8958026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8958028,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,perturbation,luna,,Dlx1/Dlx2 double knockout,embryonic,age rule: embryonic day,embryonic,E12.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,10513,32828,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958028,,,train,sda-all,samples/GSE295815/GSM8958028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8958029,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,normal,luna,,wildtype,embryonic,age rule: embryonic day,embryonic,E13.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,16736,31865,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958029,,,train,sda-all,samples/GSE295815/GSM8958029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8958030,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,perturbation,luna,,Dlx1/Dlx2 double knockout,embryonic,age rule: embryonic day,embryonic,E13.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,20650,35300,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958030,,,train,sda-all,samples/GSE295815/GSM8958030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8958031,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,perturbation,luna,,Dlx1/Dlx2 double knockout,embryonic,age rule: embryonic day,embryonic,E13.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,20524,34680,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958031,,,train,sda-all,samples/GSE295815/GSM8958031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8958032,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,normal,luna,,wildtype,embryonic,age rule: embryonic day,embryonic,E13.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,35768,34276,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958032,,,train,sda-all,samples/GSE295815/GSM8958032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8958033,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,perturbation,luna,,Dlx1/Dlx2 double knockout,embryonic,age rule: embryonic day,embryonic,E13.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,26238,34688,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958033,,,train,sda-all,samples/GSE295815/GSM8958033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8958034,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,normal,luna,,wildtype,embryonic,age rule: embryonic day,embryonic,E14.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,32001,34175,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958034,,,train,sda-all,samples/GSE295815/GSM8958034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8958036,GSE295815,GSE295815,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0001890,forebrain,head; forebrain,primary tissue,,,perturbation,luna,,Dlx1/Dlx2 double knockout,embryonic,age rule: embryonic day,embryonic,E14.5,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,27490,33075,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM8958036,,,train,sda-all,samples/GSE295815/GSM8958036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8959870,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,Obese,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2894,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999988532110091,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959870,,,train,sda-all,samples/GSE295862/GSM8959870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959871,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,Obese,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2951,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000125973431058,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959871,,,train,sda-all,samples/GSE295862/GSM8959871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959872,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,Obese,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,3156,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103012544639,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959872,,,train,sda-all,samples/GSE295862/GSM8959872,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959873,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,Obese,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2663,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999781468531469,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959873,,,train,sda-all,samples/GSE295862/GSM8959873,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959874,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,mondo_predicate (Luna: perturbation),,Weight Loss,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7898,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999934284641382,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959874,,,train,sda-all,samples/GSE295862/GSM8959874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959875,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0003916,overnutrition,disease,luna,,Weight Loss,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4860,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896855230586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959875,,,train,sda-all,samples/GSE295862/GSM8959875,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959876,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,luna,,Weight Loss,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7610,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000168855534709,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959876,,,train,sda-all,samples/GSE295862/GSM8959876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959877,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,MONDO:0011122,obesity disorder,disease,mondo_predicate (Luna: perturbation),,Weight Loss,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10372,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000180115273775,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959877,,,train,sda-all,samples/GSE295862/GSM8959877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959878,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,,,normal,luna,,Lean,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6059,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959878,,,train,sda-all,samples/GSE295862/GSM8959878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8959879,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,,,normal,luna,,Lean,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2711,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000250501002004,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959879,,,train,sda-all,samples/GSE295862/GSM8959879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8959880,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,,,normal,luna,,Lean,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4144,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499983977293536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959880,,,train,sda-all,samples/GSE295862/GSM8959880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8959881,GSE295862,GSE295862,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adipose tissue,luna,UBERON:0001013,adipose tissue,Periumbilical Adipose Tissue,primary tissue,,,normal,luna,,Lean,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5663,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999484642341785,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959881,,,train,sda-all,samples/GSE295862/GSM8959881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8962609,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2987,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.3496786098020666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962609,,,train,sda-all,samples/GSE295967/GSM8962609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8962610,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2951,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.787454116576571,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962610,,,train,sda-all,samples/GSE295967/GSM8962610,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962611,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2830,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.7864810138436065,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962611,,,train,sda-all,samples/GSE295967/GSM8962611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962612,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2552,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.784932514314309,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962612,,,train,sda-all,samples/GSE295967/GSM8962612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962613,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510 + anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1992,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.542941496166603,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962613,,,train,sda-all,samples/GSE295967/GSM8962613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962614,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510 + anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2325,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.543027236420451,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962614,,,train,sda-all,samples/GSE295967/GSM8962614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962615,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2458,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.542136399819411,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962615,,,train,sda-all,samples/GSE295967/GSM8962615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962616,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2419,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.542499449109821,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962616,,,train,sda-all,samples/GSE295967/GSM8962616,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962617,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510 + anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1921,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.541927340302814,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962617,,,train,sda-all,samples/GSE295967/GSM8962617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962618,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510 + anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2076,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.543026152518852,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962618,,,train,sda-all,samples/GSE295967/GSM8962618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962619,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2945,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.54210864966555,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962619,,,train,sda-all,samples/GSE295967/GSM8962619,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962620,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Anti-PD-1,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3007,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.542079411467902,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962620,,,train,sda-all,samples/GSE295967/GSM8962620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962621,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1694,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.327319890613411,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962621,,,train,sda-all,samples/GSE295967/GSM8962621,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962622,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,Vehicle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1684,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.327647256379862,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962622,,,train,sda-all,samples/GSE295967/GSM8962622,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8962623,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2008,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.327379063551647,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962623,,,train,sda-all,samples/GSE295967/GSM8962623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962624,GSE295967,GSE295967,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,xenograft,MONDO:0005070,neoplasm,disease,luna,,AMG 510,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1974,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.3273368721226975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962624,,,train,sda-all,samples/GSE295967/GSM8962624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9394258,GSE296053,GSE296053,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,nulliparous,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,384151,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999933463449254,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394258,,,train,sda-all,samples/GSE296053/GSM9394258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9394259,GSE296053,GSE296053,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,nulliparous,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,412822,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000023861033341,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394259,,,train,sda-all,samples/GSE296053/GSM9394259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9394260,GSE296053,GSE296053,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,lactating,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,609695,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000030456605429,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394260,,,train,sda-all,samples/GSE296053/GSM9394260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9394261,GSE296053,GSE296053,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,lactating,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,613501,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000085249415432,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394261,,,train,sda-all,samples/GSE296053/GSM9394261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8965605,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,81675,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500015060240964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965605,,,test,sda-all,samples/GSE296134/GSM8965605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 0.98}",,
GSM8965606,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,101394,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000088422541853,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965606,,,test,sda-all,samples/GSE296134/GSM8965606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 0.99}",,
GSM8965607,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,99608,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999941023826374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965607,,,test,sda-all,samples/GSE296134/GSM8965607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8965608,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,93700,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999448914361294,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965608,,,test,sda-all,samples/GSE296134/GSM8965608,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8965609,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,97546,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999890158172232,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965609,,,test,sda-all,samples/GSE296134/GSM8965609,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8965610,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,99260,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500001376121539,VERIFIED,VERIFIED,FAILED,,,VERIFIED,PASS,,,40780964,,GSM8965610,,,test,sda-all,samples/GSE296134/GSM8965610,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8965611,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,male,extracted field,M,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.9.0.0,cell,128859,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999597330878964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965611,,,test,sda-all,samples/GSE296134/GSM8965611,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8965612,GSE296134,GSE296134,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001890,forebrain,"brain, forebrain",primary tissue,,,normal,luna,,,adult,luna,adult,adult,female,extracted field,F,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.9.0.0,cell,126621,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499992892220212,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965612,,,test,sda-all,samples/GSE296134/GSM8965612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8967906,GSE296275,GSE296275,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,primary tissue,,,perturbation,luna,,LCMV Armstrong,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43522,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103637682661,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967906,,,train,sda-all,samples/GSE296275/GSM8967906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8967907,GSE296275,GSE296275,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,primary tissue,,,perturbation,luna,,LCMV Armstrong,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34077,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059999127285,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967907,,,train,sda-all,samples/GSE296275/GSM8967907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8967908,GSE296275,GSE296275,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,primary tissue,,,perturbation,luna,,LCMV Armstrong,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55204,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999882739212007,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967908,,,train,sda-all,samples/GSE296275/GSM8967908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8967909,GSE296275,GSE296275,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,Prostate,primary tissue,,,perturbation,luna,,LCMV Armstrong,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59574,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999020461471483,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967909,,,train,sda-all,samples/GSE296275/GSM8967909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968321,GSE296301,GSE296301,Transient Senescence Following Myocardial Infarction: Characterization and Functional Implications in Cardiac Remodeling [SpatialTranscriptome],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,frozen heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3177,19465,counts,um,1.0,verified,True,fluorescence: red (heuristic),3.5033931959358457,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain and modality should be stated; this is not H&E,,,GSM8968321,,,train,sda-all,samples/GSE296301/GSM8968321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968322,GSE296301,GSE296301,Transient Senescence Following Myocardial Infarction: Characterization and Functional Implications in Cardiac Remodeling [SpatialTranscriptome],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,frozen heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2972,19465,counts,um,1.0,verified,True,fluorescence: green (heuristic),3.657975293332807,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain and modality should be stated; this is not H&E,,,GSM8968322,,,train,sda-all,samples/GSE296301/GSM8968322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8968701,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,219675,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000095401640908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968701,,,val,sda-all,samples/GSE296331/GSM8968701,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968702,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50588,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999755053630363,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968702,,,val,sda-all,samples/GSE296331/GSM8968702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968703,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,220389,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999967273203299,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968703,,,val,sda-all,samples/GSE296331/GSM8968703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8968704,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,141177,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103259833514,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968704,,,val,sda-all,samples/GSE296331/GSM8968704,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968705,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,242022,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103436261486,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968705,,,val,sda-all,samples/GSE296331/GSM8968705,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968706,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,92990,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968706,,,val,sda-all,samples/GSE296331/GSM8968706,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968707,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,150072,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000168855534709,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968707,,,val,sda-all,samples/GSE296331/GSM8968707,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968708,GSE296331,GSE296331,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small Intestine,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50732,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000009392846408,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968708,,,val,sda-all,samples/GSE296331/GSM8968708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8969380,GSE296375+GSE296509,GSE296375,Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Cerebellum,primary tissue,,,normal,luna,,Home cage,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3222,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.061786265515847,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42032255,,GSM8969380,,,train,sda-all,samples/GSE296375/GSM8969380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8969381,GSE296375+GSE296509,GSE296375,Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Cerebellum,primary tissue,,,perturbation,luna,,Fear conditioned,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3349,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.059971660491136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42032255,,GSM8969381,,,train,sda-all,samples/GSE296375/GSM8969381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8969382,GSE296375+GSE296509,GSE296375,Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Cerebellum,primary tissue,,,normal,luna,,After auditory memory retrieval,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3542,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.06051235368232,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42032255,,GSM8969382,,,train,sda-all,samples/GSE296375/GSM8969382,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8970260,GSE296429,GSE296429,Spatial transcriptomic analysis of transplanted vascularized lung organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,672776,47317,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM8970260,,,train,sda-all,samples/GSE296429/GSM8970260,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8970745,GSE296452,GSE296452,IL-1 Signaling Blockade in Human Lymphocytic Myocarditis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,endomyocardial biopsy tissue,primary tissue,MONDO:0004496,myocarditis,disease,luna,lymphocytic myocarditis,before rilonacept,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,806,37082,counts,pixel,3.498558798197807,platform_constant,True,H&E,3.498558798197807,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40600280,,GSM8970745,,,train,hesrt,samples/GSE296452/GSM8970745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8970746,GSE296452,GSE296452,IL-1 Signaling Blockade in Human Lymphocytic Myocarditis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,endomyocardial biopsy tissue,primary tissue,MONDO:0004496,myocarditis,disease,luna,lymphocytic myocarditis,after rilonacept,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1277,37082,counts,pixel,3.4953720950183635,platform_constant,True,H&E,3.4953720950183635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40600280,,GSM8970746,,,train,hesrt,samples/GSE296452/GSM8970746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8970755,GSE296454,GSE296454,A spatio-cellular map of the mouse nodose ganglia,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005363,inferior vagus X ganglion,Left Nodose Ganglion,primary tissue,,,normal,luna,,Ad libitum fed,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,23872,19434,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42483274,,GSM8970755,,,test,sda-all,samples/GSE296454/GSM8970755,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8970756,GSE296454,GSE296454,A spatio-cellular map of the mouse nodose ganglia,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005363,inferior vagus X ganglion,Left Nodose Ganglion,primary tissue,,,normal,luna,,Ad libitum fed,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,37182,21926,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42483274,,GSM8970756,,,test,sda-all,samples/GSE296454/GSM8970756,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8970757,GSE296454,GSE296454,A spatio-cellular map of the mouse nodose ganglia,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005363,inferior vagus X ganglion,Right Nodose Ganglion,primary tissue,,,normal,luna,,Ad libitum fed,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,21953,20766,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42483274,,GSM8970757,,,test,sda-all,samples/GSE296454/GSM8970757,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8972045,GSE296517,GSE296517,Interrogating the Synergistic Potential of Gemcitabine and Focused Ultrasound–Induced Thermal Ablation in Breast Cancer: Insights from the BR54 Trial via Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,Triple‑negative breast cancer (TNBC),,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,72864,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8972045,,,train,sda-all,samples/GSE296517/GSM8972045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972046,GSE296517,GSE296517,Interrogating the Synergistic Potential of Gemcitabine and Focused Ultrasound–Induced Thermal Ablation in Breast Cancer: Insights from the BR54 Trial via Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,Triple‑negative breast cancer (TNBC),,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,90210,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8972046,,,train,sda-all,samples/GSE296517/GSM8972046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972049,GSE296517,GSE296517,Interrogating the Synergistic Potential of Gemcitabine and Focused Ultrasound–Induced Thermal Ablation in Breast Cancer: Insights from the BR54 Trial via Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,,tumour tissue,MONDO:0007254,breast cancer,disease,luna,"Hormone receptor‑positive, HER2‑negative",,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,99231,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM8972049,,,train,sda-all,samples/GSE296517/GSM8972049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972327,GSE296545,GSE296545,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256;MONDO:0007027,hepatocellular carcinoma;metabolic dysfunction-associated steatohepatitis,disease,luna,hepatocellular carcinoma,Dbi+/+,not stated,luna,not stated,,male,extracted field,male,GSE296545:donor_Dbi_plus,donor_Dbi_plus,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4821,32589,counts,pixel,10.888565393644384,platform_constant,True,H&E,10.888565393644384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972327,,,train,hesrt,samples/GSE296545/GSM8972327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8972328,GSE296545,GSE296545,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,Dbi-/-,not stated,luna,not stated,,male,extracted field,male,GSE296545:donor_Dbi_minus,donor_Dbi_minus,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4395,32589,counts,pixel,7.321293005268512,platform_constant,True,H&E,7.321293005268512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972328,,,train,hesrt,samples/GSE296545/GSM8972328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.72, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8972329,GSE296545,GSE296545,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256;MONDO:0007027,hepatocellular carcinoma;metabolic dysfunction-associated steatohepatitis,disease,luna,hepatocellular carcinoma,KLH,not stated,luna,not stated,,male,extracted field,male,GSE296545:donor_KLH,donor_KLH,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,32589,counts,pixel,8.029829257599834,platform_constant,True,H&E,8.029829257599834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972329,,,train,hesrt,samples/GSE296545/GSM8972329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8972330,GSE296545,GSE296545,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,hepatocellular carcinoma,KLH-ACBP,not stated,luna,not stated,,male,extracted field,male,GSE296545:donor_KLH_ACBP,donor_KLH_ACBP,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4664,32589,counts,pixel,7.193718704158121,platform_constant,True,H&E,7.193718704158121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972330,,,train,hesrt,samples/GSE296545/GSM8972330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448977,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,6701,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999230137548756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448977,,,train,sda-all,samples/GSE296577/GSM9448977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448978,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,2945,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999230137548756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448978,,,train,sda-all,samples/GSE296577/GSM9448978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448979,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,57012,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000155012056493,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448979,,,train,sda-all,samples/GSE296577/GSM9448979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448980,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,11762,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000102613216582,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448980,,,train,sda-all,samples/GSE296577/GSM9448980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448981,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,2424,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49995580636388354,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448981,,,train,sda-all,samples/GSE296577/GSM9448981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448982,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,1089,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000455097087378,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448982,,,train,sda-all,samples/GSE296577/GSM9448982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448983,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,284177,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999959858702633,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448983,,,train,sda-all,samples/GSE296577/GSM9448983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448984,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,24116,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999778881480474,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448984,,,train,sda-all,samples/GSE296577/GSM9448984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448985,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,152188,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999951074193268,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448985,,,train,sda-all,samples/GSE296577/GSM9448985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448986,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,8105,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000487379437718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448986,,,train,sda-all,samples/GSE296577/GSM9448986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448987,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,180768,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41679299,,GSM9448987,,,train,sda-all,samples/GSE296577/GSM9448987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448988,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,1997,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500091389114541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448988,,,train,sda-all,samples/GSE296577/GSM9448988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448989,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,69302,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998619420156465,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448989,,,train,sda-all,samples/GSE296577/GSM9448989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448990,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,recurrent glioblastoma,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,785959,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.50000859421552,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448990,,,train,sda-all,samples/GSE296577/GSM9448990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9448991,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,28554,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998903615632,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448991,,,train,sda-all,samples/GSE296577/GSM9448991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448992,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,346305,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999971364427746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448992,,,train,sda-all,samples/GSE296577/GSM9448992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9448993,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,56418,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000065413632201,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448993,,,train,sda-all,samples/GSE296577/GSM9448993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9448994,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,361691,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012937949594,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448994,,,train,sda-all,samples/GSE296577/GSM9448994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448995,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,pre-treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,7065,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000073659398939,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448995,,,train,sda-all,samples/GSE296577/GSM9448995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448996,GSE296577,GSE296577,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain tumor,tumour tissue,MONDO:0021211;MONDO:0018177,brain neoplasm;glioblastoma,disease,luna,,CAN-3110,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,668986,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500008143676164,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448996,,,train,sda-all,samples/GSE296577/GSM9448996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8972899,GSE296581,GSE296581,Mouse uterine gene expressions during decidual processes [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,normal,luna,,Wwtr1-flox/flox,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1530,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.28016670923205,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972899,,,train,sda-all,samples/GSE296581/GSM8972899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8972900,GSE296581,GSE296581,Mouse uterine gene expressions during decidual processes [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,normal,luna,,Wwtr1-flox/flox,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,478,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.280351200466475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972900,,,train,sda-all,samples/GSE296581/GSM8972900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM8972901,GSE296581,GSE296581,Mouse uterine gene expressions during decidual processes [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Wwtr1-flox/flox;Pgr-Cre/+,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,946,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.279248130479928,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972901,,,train,sda-all,samples/GSE296581/GSM8972901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8972902,GSE296581,GSE296581,Mouse uterine gene expressions during decidual processes [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Mouse uterus,primary tissue,,,perturbation,luna,,Wwtr1-flox/flox;Pgr-Cre/+,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,854,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.27894061130153,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972902,,,train,sda-all,samples/GSE296581/GSM8972902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.78}",,
GSM8972903,GSE296582,GSE296582,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,pancreatitis,"HBP1flox/flox, 24hrs after cerulein",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,353,19465,counts,pixel,3.506609184699931,platform_constant,True,H&E,3.506609184699931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972903,,,train,hesrt,samples/GSE296582/GSM8972903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972904,GSE296582,GSE296582,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,pancreatitis,"HBP1flox/flox, 24hrs after cerulein",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,324,19465,counts,pixel,3.5048829735743756,platform_constant,True,H&E,3.5048829735743756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972904,,,train,hesrt,samples/GSE296582/GSM8972904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972905,GSE296582,GSE296582,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,pancreatitis,"HBP1flox/flox, 48hrs after cerulein",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,714,19465,counts,pixel,3.512246796993695,platform_constant,True,H&E,3.512246796993695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972905,,,train,hesrt,samples/GSE296582/GSM8972905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972906,GSE296582,GSE296582,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,pancreatitis,"p48Cre; HBP1flox/flox, 24hrs after cerulein",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1323,19465,counts,pixel,3.5153807535271304,platform_constant,True,H&E,3.5153807535271304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972906,,,train,hesrt,samples/GSE296582/GSM8972906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972907,GSE296582,GSE296582,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,pancreatitis,"p48Cre; HBP1flox/flox, 24hrs after cerulein",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1646,19465,counts,pixel,3.5846816930593994,platform_constant,True,H&E,3.5846816930593994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972907,,,train,hesrt,samples/GSE296582/GSM8972907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972908,GSE296582,GSE296582,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0006515,acute pancreatitis,disease,luna,pancreatitis,"p48Cre; HBP1flox/flox, 48hrs after cerulein",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,736,19465,counts,pixel,3.5800608894606607,platform_constant,True,H&E,3.5800608894606607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972908,,,train,hesrt,samples/GSE296582/GSM8972908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973624,GSE296613,GSE296613,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:1060199,hemorrhagic stroke,disease,luna,,ICH + UCC,adult,age rule: age with unit,adult,3-4 month old,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,191144,48051,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973624,,,val,sda-all,samples/GSE296613/GSM8973624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973625,GSE296613,GSE296613,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:1060199,hemorrhagic stroke,disease,luna,,ICH,adult,age rule: age with unit,adult,3-4 month old,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,201398,48679,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973625,,,val,sda-all,samples/GSE296613/GSM8973625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8973626,GSE296613,GSE296613,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0011057,cerebrovascular disorder,disease,mondo_predicate (Luna: perturbation),,UCC,adult,age rule: age with unit,adult,3-4 month old,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,203603,46780,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973626,,,val,sda-all,samples/GSE296613/GSM8973626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973627,GSE296613,GSE296613,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,C57BL/6NCrl,adult,age rule: age with unit,adult,3-4 month old,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,198697,46247,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973627,,,val,sda-all,samples/GSE296613/GSM8973627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973720,GSE296623,GSE296623,Protocol for single-cell spatial transcriptomic profiling of cultured cells and engineered tissues without embedding or sectioning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Engineered in vitro model,engineered tissue,MONDO:0007254,breast cancer,disease,mondo_predicate,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,388785,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40938748,,GSM8973720,,,train,hesrt,samples/GSE296623/GSM8973720,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973744,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP012,HPAP012,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9576,18085,counts,pixel,9.81818166894559,platform_constant,True,H&E,9.81818166894559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973744,,,train,hesrt,samples/GSE296626/GSM8973744,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8973745,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP034,HPAP034,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7208,18085,counts,pixel,6.167596790927616,platform_constant,True,H&E,6.167596790927616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973745,,,train,hesrt,samples/GSE296626/GSM8973745,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973746,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP036,HPAP036,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7898,18085,counts,pixel,6.3043165150266445,platform_constant,True,H&E,6.3043165150266445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973746,,,train,hesrt,samples/GSE296626/GSM8973746,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973747,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP095,HPAP095,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5362,18085,counts,pixel,6.304316515026605,platform_constant,True,H&E,6.304316515026605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973747,,,train,hesrt,samples/GSE296626/GSM8973747,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973748,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP110,HPAP110,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8739,18085,counts,pixel,8.73753098388378,platform_constant,True,H&E,8.73753098388378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973748,,,train,hesrt,samples/GSE296626/GSM8973748,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973749,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,disease,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP019,HPAP019,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5721,18085,counts,pixel,5.260597527984167,platform_constant,True,H&E,5.260597527984167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973749,,,train,hesrt,samples/GSE296626/GSM8973749,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8973750,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP072,HPAP072,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9534,18085,counts,pixel,8.725492433703774,platform_constant,True,H&E,8.725492433703774,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973750,,,train,hesrt,samples/GSE296626/GSM8973750,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973751,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0000569,autoimmune disorder of endocrine system,disease,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP114,HPAP114,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5207,18085,counts,pixel,5.4452475670636575,platform_constant,True,H&E,5.4452475670636575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973751,,,train,hesrt,samples/GSE296626/GSM8973751,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973752,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0000569;MONDO:0001933,autoimmune disorder of endocrine system;endocrine pancreas disorder,disease,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP043,HPAP043,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6641,18085,counts,pixel,8.680787064318546,platform_constant,True,H&E,8.680787064318546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973752,,,train,hesrt,samples/GSE296626/GSM8973752,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973753,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0000569;MONDO:0001933,autoimmune disorder of endocrine system;endocrine pancreas disorder,disease,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP148,HPAP148,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11180,18085,counts,pixel,9.52206387738418,platform_constant,True,H&E,9.52206387738418,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973753,,,train,hesrt,samples/GSE296626/GSM8973753,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973754,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0000569;MONDO:0001933,autoimmune disorder of endocrine system;endocrine pancreas disorder,disease,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP107,HPAP107,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3728,18085,counts,pixel,5.091948223299426,platform_constant,True,H&E,5.091948223299426,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973754,,,train,hesrt,samples/GSE296626/GSM8973754,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973755,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0000569;MONDO:0001933,autoimmune disorder of endocrine system;endocrine pancreas disorder,disease,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP016,HPAP016,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6421,18085,counts,pixel,6.909091401018233,platform_constant,True,H&E,6.909091401018233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973755,,,train,hesrt,samples/GSE296626/GSM8973755,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973756,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP020,HPAP020,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1596,18085,counts,pixel,3.273395368896339,platform_constant,True,H&E,3.273395368896339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973756,,,train,hesrt,samples/GSE296626/GSM8973756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973757,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP149,HPAP149,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4726,18085,counts,pixel,4.728237533790973,platform_constant,True,H&E,4.728237533790973,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973757,,,train,hesrt,samples/GSE296626/GSM8973757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973758,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP032,HPAP032,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1296,18085,counts,pixel,3.079416232565573,platform_constant,True,H&E,3.079416232565573,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,40475580;41875135,,GSM8973758,,,train,hesrt,samples/GSE296626/GSM8973758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973759,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP071,HPAP071,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4840,18085,counts,pixel,4.858533656904089,platform_constant,True,H&E,4.858533656904089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973759,,,train,hesrt,samples/GSE296626/GSM8973759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973760,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP123,HPAP123,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4951,18085,counts,pixel,8.36320950623735,platform_constant,True,H&E,8.36320950623735,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973760,,,train,hesrt,samples/GSE296626/GSM8973760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973761,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP102,HPAP102,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5310,18085,counts,pixel,5.810775962600513,platform_constant,True,H&E,5.810775962600513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973761,,,train,hesrt,samples/GSE296626/GSM8973761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973762,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP087,HPAP087,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3440,18085,counts,pixel,4.728237533790974,platform_constant,True,H&E,4.728237533790974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973762,,,train,hesrt,samples/GSE296626/GSM8973762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973763,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP048,HPAP048,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10742,18085,counts,pixel,9.917850870028202,platform_constant,True,H&E,9.917850870028202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973763,,,train,hesrt,samples/GSE296626/GSM8973763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973764,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP012,HPAP012,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1405,18085,counts,pixel,5.138488632903869,platform_constant,True,H&E,5.138488632903869,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973764,,,train,hesrt,samples/GSE296626/GSM8973764,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973765,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP034,HPAP034,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,699,18085,counts,pixel,2.863753053567416,platform_constant,True,H&E,2.863753053567416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973765,,,train,hesrt,samples/GSE296626/GSM8973765,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973766,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP036,HPAP036,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2632,18085,counts,pixel,6.321206058987416,platform_constant,True,H&E,6.321206058987416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973766,,,train,hesrt,samples/GSE296626/GSM8973766,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973767,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP095,HPAP095,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1532,18085,counts,pixel,2.8708074975117897,platform_constant,True,H&E,2.8708074975117897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973767,,,train,hesrt,samples/GSE296626/GSM8973767,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973768,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,,,normal,luna,Non-Diabetic,Non-Diabetic,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP110,HPAP110,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1816,18085,counts,pixel,3.2686401224552117,platform_constant,True,H&E,3.2686401224552117,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,40475580;41875135,,GSM8973768,,,train,hesrt,samples/GSE296626/GSM8973768,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973769,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0000569,autoimmune disorder of endocrine system,disease,mondo_predicate,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP019,HPAP019,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1637,18085,counts,pixel,4.517508931631093,platform_constant,True,H&E,4.517508931631093,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973769,,,train,hesrt,samples/GSE296626/GSM8973769,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973770,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0000569,autoimmune disorder of endocrine system,disease,mondo_predicate,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP072,HPAP072,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1071,18085,counts,pixel,3.256766849992147,platform_constant,True,H&E,3.256766849992147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973770,,,train,hesrt,samples/GSE296626/GSM8973770,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973771,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,,,normal,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP114,HPAP114,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,883,18085,counts,pixel,2.4495947264696727,platform_constant,True,H&E,2.4495947264696727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973771,,,train,hesrt,samples/GSE296626/GSM8973771,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973772,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0000569,autoimmune disorder of endocrine system,disease,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP043,HPAP043,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1977,18085,counts,pixel,5.4268617602662115,platform_constant,True,H&E,5.4268617602662115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973772,,,train,hesrt,samples/GSE296626/GSM8973772,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973773,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0000569,autoimmune disorder of endocrine system,disease,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP148,HPAP148,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3648,18085,counts,pixel,4.703517448715571,platform_constant,True,H&E,4.703517448715571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973773,,,train,hesrt,samples/GSE296626/GSM8973773,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973774,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP020,HPAP020,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2364,18085,counts,pixel,3.256398687335534,platform_constant,True,H&E,3.256398687335534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973774,,,train,hesrt,samples/GSE296626/GSM8973774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973775,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP149,HPAP149,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2128,18085,counts,pixel,3.3765008467669135,platform_constant,True,H&E,3.3765008467669135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973775,,,train,hesrt,samples/GSE296626/GSM8973775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973776,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP032,HPAP032,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,600,18085,counts,pixel,2.249358479650756,platform_constant,True,H&E,2.249358479650756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973776,,,train,hesrt,samples/GSE296626/GSM8973776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973777,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP123,HPAP123,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2475,18085,counts,pixel,3.7762069381402656,platform_constant,True,H&E,3.7762069381402656,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973777,,,train,hesrt,samples/GSE296626/GSM8973777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973778,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP102,HPAP102,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1528,18085,counts,pixel,3.2682632010574983,platform_constant,True,H&E,3.2682632010574983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973778,,,train,hesrt,samples/GSE296626/GSM8973778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973779,GSE296626,GSE296626,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002527,pancreatic lymph node,Pancreatic Lymph Node,primary tissue,MONDO:0005147,type 1 diabetes mellitus,disease,luna,type 1 diabetes,Type 1 Diabetes,not stated,luna,not stated,,unknown,not stated,,GSE296626:HPAP048,HPAP048,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2442,18085,counts,pixel,3.7773383217065177,platform_constant,True,H&E,3.7773383217065177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973779,,,train,hesrt,samples/GSE296626/GSM8973779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8974358,GSE296660,GSE296660,Polyamines regulate adaptive antitumor immunity by functional specialization of regulatory T cells [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,melanoma,cell culture,MONDO:0005105,melanoma,disease,luna,,wild-type,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3066,19465,counts,pixel,4.6555754615051725,platform_constant,True,H&E,4.6555754615051725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40749666,,GSM8974358,,,train,hesrt,samples/GSE296660/GSM8974358,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.58, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM8974359,GSE296660,GSE296660,Polyamines regulate adaptive antitumor immunity by functional specialization of regulatory T cells [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,Foxp3-Cre x CK2b-fl/fl (KO),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2746,19465,counts,pixel,4.706450678364957,platform_constant,True,H&E,4.706450678364957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40749666,,GSM8974359,,,train,hesrt,samples/GSE296660/GSM8974359,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8976790,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br2720,Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4978,36601,counts,pixel,4.3781591269377005,platform_constant,True,H&E,4.3781591269377005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976790,,,train,hesrt,samples/GSE296789/GSM8976790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976791,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br2720,Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4953,36601,counts,pixel,6.152707778717031,platform_constant,True,H&E,6.152707778717031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976791,,,train,hesrt,samples/GSE296789/GSM8976791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8976792,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br2720,Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,5.380685657714954,platform_constant,True,H&E,5.380685657714954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976792,,,train,hesrt,samples/GSE296789/GSM8976792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976793,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br2743,Br2743,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4645,36601,counts,pixel,4.890432938325211,platform_constant,True,H&E,4.890432938325211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976793,,,train,hesrt,samples/GSE296789/GSM8976793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976794,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br3942,Br3942,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4582,36601,counts,pixel,4.908119682696048,platform_constant,True,H&E,4.908119682696048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976794,,,train,hesrt,samples/GSE296789/GSM8976794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976795,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6423,Br6423,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4471,36601,counts,pixel,4.890401070419096,platform_constant,True,H&E,4.890401070419096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976795,,,train,hesrt,samples/GSE296789/GSM8976795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976796,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6432,Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4701,36601,counts,pixel,4.378339395715237,platform_constant,True,H&E,4.378339395715237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976796,,,train,hesrt,samples/GSE296789/GSM8976796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8976797,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6432,Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4687,36601,counts,pixel,6.152547409958804,platform_constant,True,H&E,6.152547409958804,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976797,,,train,hesrt,samples/GSE296789/GSM8976797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8976798,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6432,Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4430,36601,counts,pixel,5.380685657714954,platform_constant,True,H&E,5.380685657714954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976798,,,train,hesrt,samples/GSE296789/GSM8976798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8976799,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6471,Br6471,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4586,36601,counts,pixel,4.378339395715237,platform_constant,True,H&E,4.378339395715237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976799,,,train,hesrt,samples/GSE296789/GSM8976799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976800,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6471,Br6471,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4502,36601,counts,pixel,6.152707778717031,platform_constant,True,H&E,6.152707778717031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976800,,,train,hesrt,samples/GSE296789/GSM8976800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8976801,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6471,Br6471,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4576,36601,counts,pixel,5.380685657714954,platform_constant,True,H&E,5.380685657714954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976801,,,train,hesrt,samples/GSE296789/GSM8976801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8976802,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6522,Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4974,36601,counts,pixel,6.152667685351862,platform_constant,True,H&E,6.152667685351862,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976802,,,train,hesrt,samples/GSE296789/GSM8976802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8976803,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br6522,Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4940,36601,counts,pixel,5.380650595137188,platform_constant,True,H&E,5.380650595137188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976803,,,train,hesrt,samples/GSE296789/GSM8976803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8976804,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br8325,Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3528,36601,counts,pixel,4.664590578628688,platform_constant,True,H&E,4.664590578628688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976804,,,train,hesrt,samples/GSE296789/GSM8976804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8976805,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br8492,Br8492,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4151,36601,counts,pixel,4.8904329383252385,platform_constant,True,H&E,4.8904329383252385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976805,,,train,hesrt,samples/GSE296789/GSM8976805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8976806,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE296789:Br8667,Br8667,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3908,36601,counts,pixel,4.681491047670626,platform_constant,True,H&E,4.681491047670626,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976806,,,train,hesrt,samples/GSE296789/GSM8976806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976807,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4249,36601,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.5139635676624215,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976807,,,train,sda-all,samples/GSE296789/GSM8976807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8976808,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4301,36601,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.5115823170404585,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976808,,,train,sda-all,samples/GSE296789/GSM8976808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8976809,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4313,36601,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.511360375209732,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976809,,,train,sda-all,samples/GSE296789/GSM8976809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976810,GSE296789,GSE296789,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain (dACC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4486,36601,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.515606348152102,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976810,,,train,sda-all,samples/GSE296789/GSM8976810,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8977110,GSE296797,GSE296797,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0020800,demyelinating disease of central nervous system,disease,mondo_predicate,normal,Naive D0,adult,age rule: age with unit,not stated,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,793,32285,counts,pixel,4.050894432955722,platform_constant,True,H&E,4.050894432955722,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8977110,,,train,hesrt,samples/GSE296797/GSM8977110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9034878,GSE296797,GSE296797,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,experimental autoimmune encephalomyelitis,EAE D13,adult,age rule: age with unit,not stated,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,969,32285,counts,pixel,4.03808412436472,platform_constant,True,H&E,4.03808412436472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034878,,,train,hesrt,samples/GSE296797/GSM9034878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034879,GSE296797,GSE296797,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,experimental autoimmune encephalomyelitis,EAE D18,adult,age rule: age with unit,not stated,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1196,32285,counts,pixel,4.058215887380552,platform_constant,True,H&E,4.058215887380552,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034879,,,train,hesrt,samples/GSE296797/GSM9034879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034880,GSE296797,GSE296797,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,experimental autoimmune encephalomyelitis,EAE D25,adult,age rule: age with unit,not stated,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1043,32285,counts,pixel,4.056058553898246,platform_constant,True,H&E,4.056058553898246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034880,,,train,hesrt,samples/GSE296797/GSM9034880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034881,GSE296797,GSE296797,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,spinal cord,primary tissue,MONDO:0005301,multiple sclerosis,disease,luna,experimental autoimmune encephalomyelitis,EAE D35,adult,age rule: age with unit,not stated,8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,891,32285,counts,pixel,4.050469565286298,platform_constant,True,H&E,4.050469565286298,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034881,,,train,hesrt,samples/GSE296797/GSM9034881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8978581,GSE296852,GSE296852,A cellular anatomy of normal adult human female urethra [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001335,prostatic urethra,prostatic urethra,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,905209,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978581,,,train,sda-all,samples/GSE296852/GSM8978581,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.97}",organ,low_confidence_annotation
GSM8978582,GSE296852,GSE296852,A cellular anatomy of normal adult human female urethra [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0001335,prostatic urethra,prostatic urethra,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,792876,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999891190807799,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978582,,,train,sda-all,samples/GSE296852/GSM8978582,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8978583,GSE296852,GSE296852,A cellular anatomy of normal adult human female urethra [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001334,female urethra,female urethra,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,364870,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092592592592,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978583,,,train,sda-all,samples/GSE296852/GSM8978583,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8978584,GSE296852,GSE296852,A cellular anatomy of normal adult human female urethra [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001334,female urethra,female urethra,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,870474,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999945540887897,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978584,,,train,sda-all,samples/GSE296852/GSM8978584,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8979564,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,180902,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979564,,,test,sda-all,samples/GSE296896/GSM8979564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.36, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979565,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,180167,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979565,,,test,sda-all,samples/GSE296896/GSM8979565,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979566,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,147797,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979566,,,test,sda-all,samples/GSE296896/GSM8979566,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979567,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,157637,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979567,,,test,sda-all,samples/GSE296896/GSM8979567,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979568,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (distal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,140083,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979568,,,test,sda-all,samples/GSE296896/GSM8979568,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM8979569,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,152916,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979569,,,test,sda-all,samples/GSE296896/GSM8979569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.6000000000000001, ""life_stage"": 0.98}",,
GSM8979570,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,148063,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979570,,,test,sda-all,samples/GSE296896/GSM8979570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.41000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979571,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,147205,54838,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979571,,,test,sda-all,samples/GSE296896/GSM8979571,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9213570,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,64985,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9213570,,,test,sda-all,samples/GSE296896/GSM9213570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9463728,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,67970,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9463728,,,test,sda-all,samples/GSE296896/GSM9463728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9463729,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,72884,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9463729,,,test,sda-all,samples/GSE296896/GSM9463729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9463730,GSE296896,GSE296896,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,cell,70155,54752,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9463730,,,test,sda-all,samples/GSE296896/GSM9463730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8979572,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,180902,3866,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979572,,,train,sda-all,samples/GSE296897/GSM8979572,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.34, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979573,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,180902,8804,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979573,,,train,sda-all,samples/GSE296897/GSM8979573,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979574,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,180902,11995,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979574,,,train,sda-all,samples/GSE296897/GSM8979574,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979575,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,180167,4879,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979575,,,train,sda-all,samples/GSE296897/GSM8979575,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.2, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979576,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,180167,11950,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979576,,,train,sda-all,samples/GSE296897/GSM8979576,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979577,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,180167,14518,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979577,,,train,sda-all,samples/GSE296897/GSM8979577,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.27, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979578,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,147797,5938,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979578,,,train,sda-all,samples/GSE296897/GSM8979578,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979579,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,147797,9075,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979579,,,train,sda-all,samples/GSE296897/GSM8979579,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979580,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,juvenile,age rule: age with unit,juvenile,4 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,147797,2996,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979580,,,train,sda-all,samples/GSE296897/GSM8979580,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.23, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979581,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,157637,3277,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979581,,,train,sda-all,samples/GSE296897/GSM8979581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.28, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979582,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,157637,9521,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979582,,,train,sda-all,samples/GSE296897/GSM8979582,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.26, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979583,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (proximal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,157637,5623,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979583,,,train,sda-all,samples/GSE296897/GSM8979583,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979584,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (distal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,140083,2620,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979584,,,train,sda-all,samples/GSE296897/GSM8979584,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.91, ""disease_status"": 0.8300000000000001, ""uberon"": 0.5, ""life_stage"": 0.98}",organ;uberon,low_confidence_annotation
GSM8979585,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (distal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,140083,8075,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979585,,,train,sda-all,samples/GSE296897/GSM8979585,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979586,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0000160,intestine,Intestine (distal),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,140083,6563,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979586,,,train,sda-all,samples/GSE296897/GSM8979586,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.5, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8979587,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,152916,3185,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979587,,,train,sda-all,samples/GSE296897/GSM8979587,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8979588,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,152916,9178,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979588,,,train,sda-all,samples/GSE296897/GSM8979588,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8979589,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,152916,7075,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979589,,,train,sda-all,samples/GSE296897/GSM8979589,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.63, ""life_stage"": 0.99}",,
GSM8979590,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,148063,3199,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979590,,,train,sda-all,samples/GSE296897/GSM8979590,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM8979591,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,148063,8941,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979591,,,train,sda-all,samples/GSE296897/GSM8979591,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979592,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,148063,6734,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979592,,,train,sda-all,samples/GSE296897/GSM8979592,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.72, ""life_stage"": 0.97}",,
GSM8979593,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,147205,3499,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979593,,,train,sda-all,samples/GSE296897/GSM8979593,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979594,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,147205,9503,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979594,,,train,sda-all,samples/GSE296897/GSM8979594,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.6900000000000001, ""life_stage"": 0.99}",,
GSM8979595,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0000160,intestine,Intestine (middle),primary tissue,,,perturbation,luna,,Dox induction for 1 week,adult,age rule: age with unit,adult,8 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,147205,7204,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979595,,,train,sda-all,samples/GSE296897/GSM8979595,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM9206540,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,64985,2489,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9206540,,,train,sda-all,samples/GSE296897/GSM9206540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM9206541,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,64985,12458,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9206541,,,train,sda-all,samples/GSE296897/GSM9206541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM9206542,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,64985,13692,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9206542,,,train,sda-all,samples/GSE296897/GSM9206542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM9463749,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,67970,1164,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463749,,,train,sda-all,samples/GSE296897/GSM9463749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM9463750,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,67970,6969,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463750,,,train,sda-all,samples/GSE296897/GSM9463750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM9463751,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,67970,5454,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463751,,,train,sda-all,samples/GSE296897/GSM9463751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.98, ""life_stage"": 0.52}",disease_status;life_stage,low_confidence_annotation
GSM9463752,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,72884,1479,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463752,,,train,sda-all,samples/GSE296897/GSM9463752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM9463753,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,72884,8003,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463753,,,train,sda-all,samples/GSE296897/GSM9463753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9463754,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,72884,6266,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463754,,,train,sda-all,samples/GSE296897/GSM9463754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9463755,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,70155,1398,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463755,,,train,sda-all,samples/GSE296897/GSM9463755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9463756,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,70155,7797,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463756,,,train,sda-all,samples/GSE296897/GSM9463756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM9463757,GSE296897,GSE296897,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Dox induction for 12h at E10,adult,age rule: age with unit,juvenile,7 weeks,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,cell,70155,6285,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463757,,,train,sda-all,samples/GSE296897/GSM9463757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM8980980,GSE296975,GSE296975,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,placenta,luna,UBERON:0001987,placenta,swine placenta,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3740,22040,counts,pixel,4.300049862810358,platform_constant,True,H&E,4.300049862810358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980980,,,train,hesrt,samples/GSE296975/GSM8980980,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.93, ""life_stage"": 0.66}",,
GSM8980981,GSE296975,GSE296975,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,placenta,luna,UBERON:0001987,placenta,swine placenta,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3003,22040,counts,pixel,4.144414607920543,platform_constant,True,H&E,4.144414607920543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980981,,,train,hesrt,samples/GSE296975/GSM8980981,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.96, ""life_stage"": 0.74}",,
GSM8980982,GSE296975,GSE296975,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,placenta,luna,UBERON:0001987,placenta,swine placenta,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3234,22040,counts,pixel,4.30224987236243,platform_constant,True,H&E,4.30224987236243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980982,,,train,hesrt,samples/GSE296975/GSM8980982,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8980983,GSE296975,GSE296975,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,placenta,luna,UBERON:0001987,placenta,swine placenta,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3679,22040,counts,pixel,4.303899673298318,platform_constant,True,H&E,4.303899673298318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980983,,,train,hesrt,samples/GSE296975/GSM8980983,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.9400000000000001, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM8981121,GSE296982,GSE296982,Single cell map of the adult female mouse urethra reveals epithelial and stromal macrophages with distinct functional identities,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001334,female urethra,urethra,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,246172,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000027250926531,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40907791,,GSM8981121,,,train,sda-all,samples/GSE296982/GSM8981121,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9232561,GSE297058,GSE297058,Hereditary Chronic Pancreatitis Induced Plasticity Cooperates with Mutant Kras in Early Pancreatic Carcinogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,manual,,Cre,adult,age rule: age with unit,juvenile,7.9 wk,male,extracted field,male,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,360769,19059,counts,um,1.0,verified,True,H&E,3.385477894863119,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41419303,,GSM9232561,,,train,sda-all,samples/GSE297058/GSM9232561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9232562,GSE297058,GSE297058,Hereditary Chronic Pancreatitis Induced Plasticity Cooperates with Mutant Kras in Early Pancreatic Carcinogenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0008185,hereditary chronic pancreatitis,disease,luna,,Cpa1,adult,age rule: age with unit,adult,8.6 wk,male,extracted field,male,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,216977,19059,counts,um,1.0,verified,True,H&E,2.699535643921179,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41419303,,GSM9232562,,,train,sda-all,samples/GSE297058/GSM9232562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8983043,GSE297064,GSE297064,Targeting circulating mechanoresponsive monocytes and macrophages to reduce fibrosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Human tissue section,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2581,36601,counts,pixel,4.8044403070123325,platform_constant,True,H&E,4.8044403070123325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41120571,,GSM8983043,,,train,hesrt,samples/GSE297064/GSM8983043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.46, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8983044,GSE297064,GSE297064,Targeting circulating mechanoresponsive monocytes and macrophages to reduce fibrosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Human tissue section,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,943,36601,counts,pixel,4.806488282377554,platform_constant,True,H&E,4.806488282377554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41120571,,GSM8983044,,,train,hesrt,samples/GSE297064/GSM8983044,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.72, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9577754,GSE297068,GSE297068,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005386,olfactory segment of nasal mucosa,whole olfactory mucosa,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,109622,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42054991,,GSM9577754,,,train,sda-all,samples/GSE297068/GSM9577754,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9577755,GSE297068,GSE297068,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005386,olfactory segment of nasal mucosa,whole olfactory mucosa,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,109611,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42054991,,GSM9577755,,,train,sda-all,samples/GSE297068/GSM9577755,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9577756,GSE297068,GSE297068,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005386,olfactory segment of nasal mucosa,whole olfactory mucosa,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,96152,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42054991,,GSM9577756,,,train,sda-all,samples/GSE297068/GSM9577756,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9577757,GSE297068,GSE297068,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,head and neck,uberon_chain,UBERON:0005386,olfactory segment of nasal mucosa,whole olfactory mucosa,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,112139,315,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42054991,,GSM9577757,,,train,sda-all,samples/GSE297068/GSM9577757,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9579157,GSE297068,GSE297068,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0005386,olfactory segment of nasal mucosa,whole olfactory mucosa,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,77023,45100,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42054991,,GSM9579157,,,train,sda-all,samples/GSE297068/GSM9579157,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9579158,GSE297068,GSE297068,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0005386,olfactory segment of nasal mucosa,whole olfactory mucosa,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,98274,39848,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42054991,,GSM9579158,,,train,sda-all,samples/GSE297068/GSM9579158,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8983431,GSE297081,GSE297081,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,mondo_predicate (Luna: perturbation),hepatocellular carcinoma,EVT0185 treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4525,19465,counts,pixel,4.692055456682389,platform_constant,True,H&E,4.692055456682389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983431,,,test,hesrt,samples/GSE297081/GSM8983431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8983432,GSE297081,GSE297081,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,hepatocellular carcinoma,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,19465,counts,pixel,4.4659910288777915,platform_constant,True,H&E,4.4659910288777915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983432,,,test,hesrt,samples/GSE297081/GSM8983432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8983433,GSE297081,GSE297081,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,hepatocellular carcinoma,"wild type, non treatment",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4699,19465,counts,pixel,4.714599598587771,platform_constant,True,H&E,4.714599598587771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983433,,,test,hesrt,samples/GSE297081/GSM8983433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8983434,GSE297081,GSE297081,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,mondo_predicate (Luna: perturbation),hepatocellular carcinoma,"Acly knockout, non treatment",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4970,19465,counts,pixel,5.401377172552009,platform_constant,True,H&E,5.401377172552009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983434,,,test,hesrt,samples/GSE297081/GSM8983434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8984115,GSE297119,GSE297119,Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002515,periosteum,periosteum,primary tissue,MONDO:0005315,bone fracture,disease,mondo_predicate (Luna: perturbation),,d0,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10146,19059,counts,pixel,4.2150664964213185,platform_constant,True,H&E,4.2150664964213185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40483363,,GSM8984115,,,train,hesrt,samples/GSE297119/GSM8984115,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984116,GSE297119,GSE297119,Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002515,periosteum,periosteum,primary tissue,MONDO:0005315,bone fracture,disease,mondo_predicate (Luna: perturbation),,d5,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6812,19465,counts,pixel,8.094048852977227,platform_constant,True,H&E,8.094048852977227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40483363,,GSM8984116,,,train,hesrt,samples/GSE297119/GSM8984116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984117,GSE297119,GSE297119,Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002515,periosteum,periosteum,primary tissue,MONDO:0005315,bone fracture,disease,mondo_predicate (Luna: perturbation),,d15,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7260,19465,counts,pixel,9.068572631055238,platform_constant,True,H&E,9.068572631055238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40483363,,GSM8984117,,,train,hesrt,samples/GSE297119/GSM8984117,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984652,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,HFE WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3432,17943,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),4.152719153733554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984652,,,train,sda-all,samples/GSE297144/GSM8984652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984653,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,HFE WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3629,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.308880973491598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984653,,,train,sda-all,samples/GSE297144/GSM8984653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984654,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,mondo_predicate (Luna: perturbation),,HFE H63D,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2043,17943,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.188760169496387,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984654,,,train,sda-all,samples/GSE297144/GSM8984654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984655,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,mondo_predicate (Luna: perturbation),,HFE H63D,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2868,17943,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),4.186354631700367,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984655,,,train,sda-all,samples/GSE297144/GSM8984655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984656,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,HFE H63D,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4570,17943,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),5.129799177869982,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984656,,,train,sda-all,samples/GSE297144/GSM8984656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984657,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,HFE WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3697,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.156294407208097,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984657,,,train,sda-all,samples/GSE297144/GSM8984657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984658,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,mondo_predicate (Luna: perturbation),,HFE H63D,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3659,17943,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),4.179522969708007,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984658,,,train,sda-all,samples/GSE297144/GSM8984658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984659,GSE297144,GSE297144,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,HFE WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2713,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.539159235434246,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984659,,,train,sda-all,samples/GSE297144/GSM8984659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8989875,GSE297388,GSE297388,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,C57BL/6J-mdx,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1969,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),5.137178963649799,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989875,,,train,sda-all,samples/GSE297388/GSM8989875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8989876,GSE297388,GSE297388,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,D2.B10-mdx,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1455,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),5.140356582873277,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989876,,,train,sda-all,samples/GSE297388/GSM8989876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8989877,GSE297388,GSE297388,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,C57BL/6J-mdx,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2511,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.511266052437389,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989877,,,train,sda-all,samples/GSE297388/GSM8989877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8989878,GSE297388,GSE297388,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,Skeletal Muscle,primary tissue,MONDO:0010679,Duchenne muscular dystrophy,disease,luna,,D2.B10-mdx,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1574,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.506525192801236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989878,,,train,sda-all,samples/GSE297388/GSM8989878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8992213,GSE297459,GSE297459,Human bladder cell spatial mapping,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,primary tissue,,,not stated,luna,,,adult,age rule: age in years,adult,42 years,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,528538,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059999127285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8992213,,,val,sda-all,samples/GSE297459/GSM8992213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8995843,GSE297621,GSE297621,Spatial transcriptomics of Atg7 knockout mice reveals ATG7’s role in antimicrobial immunity against nontuberculous mycobacteria,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"Atg7 WT (Atg7fl/fl LysM-Cre-/-), NTM infection",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3170,19465,counts,pixel,4.5659895938467185,platform_constant,True,H&E,4.5659895938467185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40730835,,GSM8995843,,,train,hesrt,samples/GSE297621/GSM8995843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8995844,GSE297621,GSE297621,Spatial transcriptomics of Atg7 knockout mice reveals ATG7’s role in antimicrobial immunity against nontuberculous mycobacteria,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"Atg7 cKO (Atg7fl/fl LysM-Cre+/+), NTM infection",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3801,19465,counts,pixel,5.351522940037312,platform_constant,True,H&E,5.351522940037312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40730835,,GSM8995844,,,train,hesrt,samples/GSE297621/GSM8995844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8996339,GSE297667,GSE297667,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,Lecanemab,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,Nova-ST,sequencing-based,other,,,bin,57800,51348,unknown,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,41286448,,GSM8996339,,,train,sda-all,samples/GSE297667/GSM8996339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.87, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8996340,GSE297667,GSE297667,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,Lecanemab,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,Nova-ST,sequencing-based,other,,,bin,57800,52120,unknown,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,41286448,,GSM8996340,,,train,sda-all,samples/GSE297667/GSM8996340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8996341,GSE297667,GSE297667,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Brain,xenograft,,,disease,luna,,Lecanemab LALA-PG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,Nova-ST,sequencing-based,other,,,bin,57800,51589,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41286448,,GSM8996341,,,train,sda-all,samples/GSE297667/GSM8996341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8996342,GSE297667,GSE297667,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Brain,xenograft,,,disease,luna,,Lecanemab LALA-PG,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Other,release v3,Nova-ST,sequencing-based,other,,,bin,57800,52343,unknown,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,41286448,,GSM8996342,,,train,sda-all,samples/GSE297667/GSM8996342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.39, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8998316,GSE297745,GSE297745,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004496,myocarditis,disease,luna,,anti-PD-1 + anti-CTLA-4,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2503,19465,counts,um,1.0,verified,True,H&E,6.9747681605734515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998316,,,train,sda-all,samples/GSE297745/GSM8998316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8998317,GSE297745,GSE297745,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004496,myocarditis,disease,luna,,anti-PD-1 + anti-CTLA-4,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3052,19465,counts,um,1.0,verified,True,H&E,6.912943084682962,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998317,,,train,sda-all,samples/GSE297745/GSM8998317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8998318,GSE297745,GSE297745,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004496,myocarditis,disease,luna,,anti-PD-1 + anti-CTLA-4 + IL-17A neutralizing antbody,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2604,19465,counts,um,1.0,verified,True,H&E,6.97278777450552,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998318,,,train,sda-all,samples/GSE297745/GSM8998318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8998319,GSE297745,GSE297745,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004496,myocarditis,disease,mondo_predicate (Luna: perturbation),,anti-PD-1 + anti-CTLA-4 + IL-17A neutralizing antbody,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2585,19465,counts,um,1.0,verified,True,H&E,6.908094803096151,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998319,,,train,sda-all,samples/GSE297745/GSM8998319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9002269,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,21245,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002269,,,train,sda-all,samples/GSE297945/GSM9002269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.51}",disease_status;life_stage,low_confidence_annotation
GSM9002270,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,96397,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002270,,,train,sda-all,samples/GSE297945/GSM9002270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9002271,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,118634,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002271,,,train,sda-all,samples/GSE297945/GSM9002271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9002272,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,19020,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002272,,,train,sda-all,samples/GSE297945/GSM9002272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM9002273,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,19655,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000171303275318,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002273,,,train,sda-all,samples/GSE297945/GSM9002273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9002274,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,13900,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.49994212962962964,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002274,,,train,sda-all,samples/GSE297945/GSM9002274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 0.6900000000000001}",,
GSM9002275,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0800133,pulmonary hypoplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,45376,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002275,,,train,sda-all,samples/GSE297945/GSM9002275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9002276,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019091,bronchopulmonary dysplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,15367,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002276,,,train,sda-all,samples/GSE297945/GSM9002276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9002277,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005453,congenital heart disease,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,24418,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000308641975308,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002277,,,train,sda-all,samples/GSE297945/GSM9002277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9002278,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,22157,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002278,,,train,sda-all,samples/GSE297945/GSM9002278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM9002279,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,41366,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002279,,,train,sda-all,samples/GSE297945/GSM9002279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9002280,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0006663,perinatal asphyxia,disease,mondo_predicate,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,47236,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002280,,,train,sda-all,samples/GSE297945/GSM9002280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9002281,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019091,bronchopulmonary dysplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,19686,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002281,,,train,sda-all,samples/GSE297945/GSM9002281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM9002282,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0800133,pulmonary hypoplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,49136,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017146776405,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002282,,,train,sda-all,samples/GSE297945/GSM9002282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM9002283,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0006663,perinatal asphyxia,disease,mondo_predicate,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,11068,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002283,,,train,sda-all,samples/GSE297945/GSM9002283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM9002284,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,41621,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002284,,,train,sda-all,samples/GSE297945/GSM9002284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9002285,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019091,bronchopulmonary dysplasia,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,7861,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000257484207635,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002285,,,train,sda-all,samples/GSE297945/GSM9002285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9002286,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,22856,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002286,,,train,sda-all,samples/GSE297945/GSM9002286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.44}",disease_status;life_stage,low_confidence_annotation
GSM9002287,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,49826,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002287,,,train,sda-all,samples/GSE297945/GSM9002287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9002288,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,122416,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002288,,,train,sda-all,samples/GSE297945/GSM9002288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9002289,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005313,necrotizing enterocolitis,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,18124,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002289,,,train,sda-all,samples/GSE297945/GSM9002289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9002290,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,33551,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000082665123584,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002290,,,train,sda-all,samples/GSE297945/GSM9002290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM9002291,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,20220,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002291,,,train,sda-all,samples/GSE297945/GSM9002291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM9002292,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0800133,pulmonary hypoplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,44277,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002292,,,train,sda-all,samples/GSE297945/GSM9002292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9002293,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019091,bronchopulmonary dysplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,17761,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002293,,,train,sda-all,samples/GSE297945/GSM9002293,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM9002294,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005453,congenital heart disease,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,14657,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917776681466,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002294,,,train,sda-all,samples/GSE297945/GSM9002294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9002295,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,31853,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002295,,,train,sda-all,samples/GSE297945/GSM9002295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.97, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9002296,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0021108,meningitis,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,36362,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002296,,,train,sda-all,samples/GSE297945/GSM9002296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9002297,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0006663,perinatal asphyxia,disease,mondo_predicate,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,34131,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002297,,,train,sda-all,samples/GSE297945/GSM9002297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9002298,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019091,bronchopulmonary dysplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,14938,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002298,,,train,sda-all,samples/GSE297945/GSM9002298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9002299,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0800133,pulmonary hypoplasia,disease,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,40064,343,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000143867148964,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002299,,,train,sda-all,samples/GSE297945/GSM9002299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9002300,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0006663,perinatal asphyxia,disease,mondo_predicate,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8432,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002300,,,train,sda-all,samples/GSE297945/GSM9002300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9002301,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,41113,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002301,,,train,sda-all,samples/GSE297945/GSM9002301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9002302,GSE297945,GSE297945,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0019091,bronchopulmonary dysplasia,disease,luna,,,adult,luna,adult,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,5604,343,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40502191,,GSM9002302,,,train,sda-all,samples/GSE297945/GSM9002302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9002336,GSE297947,GSE297947,IL-33/IL1RL1 (ST2) signalling drives immune suppression in HPV-mediated epithelial hyperplasia,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0001459,skin of external ear,ear skin,primary tissue,,,normal,luna,,C57BL/6J,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2444,31053,counts,um,1.0,verified,True,H&E-like (heuristic),4.168619593163731,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679897,,GSM9002336,,,train,sda-all,samples/GSE297947/GSM9002336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9004713,GSE298021,GSE298021,Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes,Triticum aestivum,4565,bread wheat,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,plant,luna,,,seed,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,151711,70766,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40904198;42192524,,GSM9004713,,,train,sda-all,samples/GSE298021/GSM9004713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.92}",,
GSM9004714,GSE298021,GSE298021,Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes,Triticum aestivum,4565,bread wheat,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,plant,luna,,,seed,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,156493,63481,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40904198;42192524,,GSM9004714,,,train,sda-all,samples/GSE298021/GSM9004714,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.84}",,
GSM9004715,GSE298021,GSE298021,Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes,Triticum aestivum,4565,bread wheat,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,plant,luna,,,seed,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,STOmics,,,bin,136491,62432,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40904198;42192524,,GSM9004715,,,train,sda-all,samples/GSE298021/GSM9004715,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.85}",,
GSM9008651,GSE298115,GSE298115,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001132,parathyroid gland,parathyroid,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,230,19465,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41025096,,GSM9008651,,,test,hesrt,samples/GSE298115/GSM9008651,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9008653,GSE298115,GSE298115,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001132,parathyroid gland,parathyroid,primary tissue,,,perturbation,luna,,Gcm2 variant p.Y392S,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,971,19465,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41025096,,GSM9008653,,,test,hesrt,samples/GSE298115/GSM9008653,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008654,GSE298115,GSE298115,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001132,parathyroid gland,Parathyroid,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1544,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41025096,,GSM9008654,,,test,sda-all,samples/GSE298115/GSM9008654,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008655,GSE298115,GSE298115,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001132,parathyroid gland,Parathyroid,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,737,19465,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41025096,,GSM9008655,,,test,sda-all,samples/GSE298115/GSM9008655,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008656,GSE298115,GSE298115,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001132,parathyroid gland,Parathyroid,primary tissue,,,perturbation,luna,,Gcm2 variant p.Y392S,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1531,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41025096,,GSM9008656,,,test,sda-all,samples/GSE298115/GSM9008656,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008657,GSE298115,GSE298115,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001132,parathyroid gland,Parathyroid,primary tissue,,,perturbation,luna,,Gcm2 variant p.Y392S,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1466,19465,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41025096,,GSM9008657,,,test,sda-all,samples/GSE298115/GSM9008657,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9011362,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3186,18085,counts,pixel,4.685212622397548,platform_constant,True,H&E,4.685212622397548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011362,,,train,hesrt,samples/GSE298286/GSM9011362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011363,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1567,18085,counts,pixel,7.308179487351373,platform_constant,True,H&E,7.308179487351373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011363,,,train,hesrt,samples/GSE298286/GSM9011363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011364,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1703,18085,counts,pixel,4.390778009073881,platform_constant,True,H&E,4.390778009073881,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011364,,,train,hesrt,samples/GSE298286/GSM9011364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011365,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0002481,bone tissue,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4027,18085,counts,pixel,6.338528946747309,platform_constant,True,H&E,6.338528946747309,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011365,,,train,hesrt,samples/GSE298286/GSM9011365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011366,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0002481,bone tissue,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,483,18085,counts,pixel,3.6054826743426385,platform_constant,True,H&E,3.6054826743426385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011366,,,train,hesrt,samples/GSE298286/GSM9011366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011367,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4102,18085,counts,pixel,4.85423643425462,platform_constant,True,H&E,4.85423643425462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011367,,,train,hesrt,samples/GSE298286/GSM9011367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011368,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0001474,bone element,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,metastatic breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,816,18085,counts,pixel,3.2174916738739565,platform_constant,True,H&E,3.2174916738739565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011368,,,train,hesrt,samples/GSE298286/GSM9011368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011369,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary breast tumor,tumour tissue,MONDO:0021100,breast neoplasm,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,978,18085,counts,pixel,7.985869972222098,platform_constant,True,H&E,7.985869972222098,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011369,,,train,hesrt,samples/GSE298286/GSM9011369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011370,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary breast tumor,tumour tissue,MONDO:0021100,breast neoplasm,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1911,18085,counts,pixel,6.5716189864938945,platform_constant,True,H&E,6.5716189864938945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011370,,,train,hesrt,samples/GSE298286/GSM9011370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011371,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary breast tumor,tumour tissue,MONDO:0021100,breast neoplasm,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.81124004738677,platform_constant,True,H&E,10.81124004738677,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011371,,,train,hesrt,samples/GSE298286/GSM9011371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011372,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary breast tumor,tumour tissue,MONDO:0021100,breast neoplasm,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,10.733673573182411,platform_constant,True,H&E,10.733673573182411,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011372,,,train,hesrt,samples/GSE298286/GSM9011372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011373,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary breast tumor,tumour tissue,MONDO:0021100,breast neoplasm,disease,luna,breast cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4651,18085,counts,pixel,3.2911121974722732,platform_constant,True,H&E,3.2911121974722732,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41734374,,GSM9011373,,,train,hesrt,samples/GSE298286/GSM9011373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011374,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0002481,bone tissue,Bone metastatic breast tumor,metastasis,MONDO:0021100;MONDO:0024883,breast neoplasm;metastatic neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1211,18120,counts,pixel,6.961064969034329,platform_constant,True,H&E,6.961064969034329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011374,,,train,hesrt,samples/GSE298286/GSM9011374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011376,GSE298286,GSE298286,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Primary breast tumor,tumour tissue,MONDO:0021100,breast neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4926,18120,counts,pixel,6.254582672007621,platform_constant,True,H&E,6.254582672007621,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011376,,,train,hesrt,samples/GSE298286/GSM9011376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011925,GSE298314,GSE298314,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0010415,barrel cortex,Barrel cortex,primary tissue,,,perturbation,luna,,Whisker lesioning of right snout at P4,neonatal or infant,age rule: postnatal day,neonatal or infant,P5,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,210307,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40934914,,GSM9011925,,,val,sda-all,samples/GSE298314/GSM9011925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011926,GSE298314,GSE298314,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0010415,barrel cortex,Barrel cortex,primary tissue,,,perturbation,luna,,Whisker lesioning of right snout at P4,neonatal or infant,age rule: postnatal day,neonatal or infant,P5,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,211398,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40934914,,GSM9011926,,,val,sda-all,samples/GSE298314/GSM9011926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011927,GSE298314,GSE298314,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0010415,barrel cortex,Barrel cortex,primary tissue,,,perturbation,luna,,Whisker lesioning of right snout at P4,neonatal or infant,age rule: postnatal day,neonatal or infant,P5,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,202554,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40934914,,GSM9011927,,,val,sda-all,samples/GSE298314/GSM9011927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011928,GSE298314,GSE298314,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0010415,barrel cortex,Barrel cortex,primary tissue,,,perturbation,luna,,Whisker lesioning of right snout at P4,neonatal or infant,age rule: postnatal day,neonatal or infant,P5,female,extracted field,Female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,239321,180,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40934914,,GSM9011928,,,val,sda-all,samples/GSE298314/GSM9011928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9016866,GSE298545,GSE298545,Molecular pathology of acute spinal cord injury in middle-aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t16",primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,Bl/J6,juvenile,luna,juvenile,Young,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,979,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.077179370339766,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016866,,,test,sda-all,samples/GSE298545/GSM9016866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM9016867,GSE298545,GSE298545,Molecular pathology of acute spinal cord injury in middle-aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t17",primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,Bl/J6,juvenile,luna,juvenile,Young,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,603,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.125137315673252,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016867,,,test,sda-all,samples/GSE298545/GSM9016867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9016868,GSE298545,GSE298545,Molecular pathology of acute spinal cord injury in middle-aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t18",primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,Bl/J6,aged,luna,aged,Aged,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,884,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.159923309939592,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016868,,,test,sda-all,samples/GSE298545/GSM9016868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9016869,GSE298545,GSE298545,Molecular pathology of acute spinal cord injury in middle-aged mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t19",primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,Bl/J6,aged,luna,aged,Aged,female,extracted field,Female,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,816,32285,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.198485634943485,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016869,,,test,sda-all,samples/GSE298545/GSM9016869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9017964,GSE298591,GSE298591,MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Mouse Brain,primary tissue,,,normal,luna,,Control,embryonic,age rule: embryonic day,embryonic,E16.5,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,Merscope,,,cell,108533,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40707493,,GSM9017964,,,train,sda-all,samples/GSE298591/GSM9017964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9017965,GSE298591,GSE298591,MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Mouse Brain,primary tissue,,,perturbation,luna,,Knockout,embryonic,age rule: embryonic day,embryonic,E16.5,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,Merscope,,,cell,110004,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40707493,,GSM9017965,,,train,sda-all,samples/GSE298591/GSM9017965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM9019992,GSE298650,GSE298650,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,,neonatal or infant,age rule: postnatal day,neonatal or infant,postnatal day 0,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,25458,23615,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019992,,,train,sda-all,samples/GSE298650/GSM9019992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9019993,GSE298650,GSE298650,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,,neonatal or infant,age rule: postnatal day,neonatal or infant,postnatal day 7,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,41005,22771,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019993,,,train,sda-all,samples/GSE298650/GSM9019993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9019994,GSE298650,GSE298650,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,,neonatal or infant,age rule: postnatal day,neonatal or infant,postnatal day 7,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,34930,23543,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019994,,,train,sda-all,samples/GSE298650/GSM9019994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9019995,GSE298650,GSE298650,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,,adult,age rule: postnatal day,juvenile,postnatal day 56,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,42034,25607,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019995,,,train,sda-all,samples/GSE298650/GSM9019995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9019996,GSE298650,GSE298650,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,normal,luna,,,adult,age rule: postnatal day,juvenile,postnatal day 56,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,42620,21755,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019996,,,train,sda-all,samples/GSE298650/GSM9019996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9020679,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2447,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020679,,,train,sda-all,samples/GSE298680/GSM9020679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020680,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2587,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020680,,,train,sda-all,samples/GSE298680/GSM9020680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020681,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2073,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020681,,,train,sda-all,samples/GSE298680/GSM9020681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020682,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2492,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020682,,,train,sda-all,samples/GSE298680/GSM9020682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020683,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2464,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020683,,,train,sda-all,samples/GSE298680/GSM9020683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9020684,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2451,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020684,,,train,sda-all,samples/GSE298680/GSM9020684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020685,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1823,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020685,,,train,sda-all,samples/GSE298680/GSM9020685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020686,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2114,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020686,,,train,sda-all,samples/GSE298680/GSM9020686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020687,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2176,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020687,,,train,sda-all,samples/GSE298680/GSM9020687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020688,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2097,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020688,,,train,sda-all,samples/GSE298680/GSM9020688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020689,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2402,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020689,,,train,sda-all,samples/GSE298680/GSM9020689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020690,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2536,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020690,,,train,sda-all,samples/GSE298680/GSM9020690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020691,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2305,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020691,,,train,sda-all,samples/GSE298680/GSM9020691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020692,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1901,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020692,,,train,sda-all,samples/GSE298680/GSM9020692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020693,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1760,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020693,,,train,sda-all,samples/GSE298680/GSM9020693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020694,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1777,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020694,,,train,sda-all,samples/GSE298680/GSM9020694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020695,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2450,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020695,,,train,sda-all,samples/GSE298680/GSM9020695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020696,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2463,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020696,,,train,sda-all,samples/GSE298680/GSM9020696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020697,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2487,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020697,,,train,sda-all,samples/GSE298680/GSM9020697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020698,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2496,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020698,,,train,sda-all,samples/GSE298680/GSM9020698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020699,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1765,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020699,,,train,sda-all,samples/GSE298680/GSM9020699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020700,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1839,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020700,,,train,sda-all,samples/GSE298680/GSM9020700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020701,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1908,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020701,,,train,sda-all,samples/GSE298680/GSM9020701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020702,GSE298680,GSE298680,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,mild 6OHA injeciton (0.6 ug),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1833,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9020702,,,train,sda-all,samples/GSE298680/GSM9020702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9021012,GSE298689,GSE298689,Spatially resolved single-cell analysis uncovers protein kinase Cδ-expressing microglia with anti-tumor activity in glioblastoma [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,glioblastoma,treated,adult,age rule: age with unit,juvenile,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2025,32285,counts,pixel,4.0906251093015,platform_constant,True,H&E,4.0906251093015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41503214,,GSM9021012,,,train,hesrt,samples/GSE298689/GSM9021012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9022158,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,464,19465,counts,pixel,9.10975037348554,platform_constant,True,H&E,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022158,,,train,hesrt,samples/GSE298742/GSM9022158,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022159,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,335,19465,counts,pixel,9.10975037348554,platform_constant,True,H&E,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022159,,,train,hesrt,samples/GSE298742/GSM9022159,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022160,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,330,19465,counts,pixel,8.574929257125442,platform_constant,True,H&E,8.574929257125442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022160,,,train,hesrt,samples/GSE298742/GSM9022160,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.32, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022161,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,426,19465,counts,pixel,9.10975037348554,platform_constant,True,H&E,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022161,,,train,hesrt,samples/GSE298742/GSM9022161,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022162,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,467,19465,counts,pixel,6.980048127597761,platform_constant,True,H&E,6.980048127597761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022162,,,train,hesrt,samples/GSE298742/GSM9022162,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022163,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,575,19465,counts,pixel,6.980048127597761,platform_constant,True,H&E,6.980048127597761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022163,,,train,hesrt,samples/GSE298742/GSM9022163,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022164,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,305,19465,counts,pixel,6.896551724137931,platform_constant,True,H&E,6.896551724137931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022164,,,train,hesrt,samples/GSE298742/GSM9022164,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022165,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,,,normal,luna,,Hand1 wildtype,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,464,19465,counts,pixel,8.574929257125442,platform_constant,True,H&E,8.574929257125442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022165,,,train,hesrt,samples/GSE298742/GSM9022165,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9022166,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,143,19465,counts,pixel,6.896551724137931,platform_constant,True,H&E,6.896551724137931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022166,,,train,hesrt,samples/GSE298742/GSM9022166,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022167,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,153,19465,counts,pixel,6.980048127597761,platform_constant,True,H&E,6.980048127597761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022167,,,train,hesrt,samples/GSE298742/GSM9022167,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9022168,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,532,19465,counts,pixel,9.10975037348554,platform_constant,True,H&E,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022168,,,train,hesrt,samples/GSE298742/GSM9022168,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022169,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,598,19465,counts,pixel,8.574929257125442,platform_constant,True,H&E,8.574929257125442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022169,,,train,hesrt,samples/GSE298742/GSM9022169,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.17, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022170,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,125,19465,counts,pixel,6.896551724137931,platform_constant,True,H&E,6.896551724137931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022170,,,train,hesrt,samples/GSE298742/GSM9022170,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.32, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022171,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,257,19465,counts,pixel,7.488636437889696,platform_constant,True,H&E,7.488636437889696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022171,,,train,hesrt,samples/GSE298742/GSM9022171,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM9022172,GSE298742+GSE299579,GSE298742,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0007118,umbilicus,E13.5 transverse FFPE sections at level of umbilicus,primary tissue,MONDO:0019015,omphalocele,disease,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,embryonic,age rule: embryonic day,embryonic,13.5 embryonic days,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,299,19465,counts,pixel,8.0,platform_constant,True,H&E,8.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022172,,,train,hesrt,samples/GSE298742/GSM9022172,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.41000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9022964,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:1000010,mole,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2892,37082,counts,um,1.0,verified,True,H&E,5.117955386377146,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022964,,,test,sda-all,samples/GSE298774/GSM9022964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022965,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2260,18085,counts,um,1.0,verified,True,H&E,7.803979092530061,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022965,,,test,sda-all,samples/GSE298774/GSM9022965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9022967,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,37082,counts,um,1.0,verified,True,H&E,11.27054815479372,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022967,,,test,sda-all,samples/GSE298774/GSM9022967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9022968,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4151,37082,counts,um,1.0,verified,True,H&E,8.906421050284752,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022968,,,test,sda-all,samples/GSE298774/GSM9022968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022969,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14328,37082,counts,um,1.0,verified,True,H&E,8.736095165919172,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022969,,,test,sda-all,samples/GSE298774/GSM9022969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9022970,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6415,37082,counts,um,1.0,verified,True,H&E,9.077969245029756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022970,,,test,sda-all,samples/GSE298774/GSM9022970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9022971,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14210,37082,counts,um,1.0,verified,True,H&E,8.795054548746215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022971,,,test,sda-all,samples/GSE298774/GSM9022971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022972,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14145,37082,counts,um,1.0,verified,True,H&E,8.588860692266174,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022972,,,test,sda-all,samples/GSE298774/GSM9022972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022973,GSE298774,GSE298774,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:1000010,mole,Skin,tumour tissue,MONDO:0005073;MONDO:0005105,melanocytic nevus;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,37082,counts,um,1.0,verified,True,H&E,7.012132840270801,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022973,,,test,sda-all,samples/GSE298774/GSM9022973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9025382,GSE298872,GSE298872,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,normal,luna,,non-metastatic,not stated,luna,not stated,,female,extracted field,female,GSE298872:patient 3,patient 3,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,31695,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025382,,,train,hesrt,samples/GSE298872/GSM9025382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9025383,GSE298872,GSE298872,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,metastasis,MONDO:0007254,breast cancer,disease,luna,,metastatic,not stated,luna,not stated,,female,extracted field,female,GSE298872:patient 3,patient 3,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,526905,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025383,,,train,hesrt,samples/GSE298872/GSM9025383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9025384,GSE298872,GSE298872,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,primary tissue,,,normal,luna,,non-metastatic,not stated,luna,not stated,,female,extracted field,female,GSE298872:patient 5,patient 5,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,20644,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025384,,,train,hesrt,samples/GSE298872/GSM9025384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9025385,GSE298872,GSE298872,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,metastasis,MONDO:0007254,breast cancer,disease,luna,,metastatic,not stated,luna,not stated,,female,extracted field,female,GSE298872:patient 5,patient 5,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,586136,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025385,,,train,hesrt,samples/GSE298872/GSM9025385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9026037,GSE298921,GSE298921,Salivary gland transcriptomic analysis in the IL-14α transgenic mouse model of Sjögren’s disease using Visium V1 3' spatial gene expression assay,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0001829,major salivary gland,Submandibular and sublingual gland,primary tissue,,,normal,luna,,C57BL6,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1849,56748,counts,pixel,4.091874966835359,platform_constant,True,H&E,4.091874966835359,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40697343,,GSM9026037,,,test,hesrt,samples/GSE298921/GSM9026037,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9026038,GSE298921,GSE298921,Salivary gland transcriptomic analysis in the IL-14α transgenic mouse model of Sjögren’s disease using Visium V1 3' spatial gene expression assay,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0001829,major salivary gland,Submandibular and sublingual gland,primary tissue,,,disease,luna,,IL-14a transgenic,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2182,56748,counts,pixel,4.181875030987711,platform_constant,True,H&E,4.181875030987711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40697343,,GSM9026038,,,test,hesrt,samples/GSE298921/GSM9026038,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9030938,GSE299025,GSE299025,Immunosuppressive tumor microenvironment of osteosarcoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0002481,bone tissue,Osteosarcoma,tumour tissue,MONDO:0009807,osteosarcoma,disease,luna,osteosarcoma,,not stated,luna,not stated,,male,extracted field,male,GSE299025:PatientA,PatientA,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3053,17943,counts,pixel,4.075938295754663,platform_constant,True,H&E,4.075938295754663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40647416,,GSM9030938,,,train,hesrt,samples/GSE299025/GSM9030938,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9030939,GSE299025,GSE299025,Immunosuppressive tumor microenvironment of osteosarcoma [Spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0002481,bone tissue,Osteosarcoma,tumour tissue,MONDO:0009807,osteosarcoma,disease,luna,osteosarcoma,,not stated,luna,not stated,,female,extracted field,female,GSE299025:PatientB,PatientB,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3020,17943,counts,pixel,4.075938295754663,platform_constant,True,H&E,4.075938295754663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40647416,,GSM9030939,,,train,hesrt,samples/GSE299025/GSM9030939,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9031082,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1115,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.312575267395785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031082,,,val,sda-all,samples/GSE299027/GSM9031082,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9031083,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2590,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.875264118428958,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031083,,,val,sda-all,samples/GSE299027/GSM9031083,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9031084,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7317,18085,counts,um,1.0,verified,True,H&E-like (heuristic),9.989101044231838,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031084,,,val,sda-all,samples/GSE299027/GSM9031084,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9031085,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3629,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.543405799278704,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031085,,,val,sda-all,samples/GSE299027/GSM9031085,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031086,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3237,18085,counts,um,1.0,verified,True,blue bright-field stain (heuristic),6.359818469668191,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031086,,,val,sda-all,samples/GSE299027/GSM9031086,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9031087,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4906,18085,counts,um,1.0,verified,True,H&E-like (heuristic),9.04199040242302,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031087,,,val,sda-all,samples/GSE299027/GSM9031087,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9031088,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2028,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.9643758976813785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031088,,,val,sda-all,samples/GSE299027/GSM9031088,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031089,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6226,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.963449277911202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031089,,,val,sda-all,samples/GSE299027/GSM9031089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9031090,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,823,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.6182607082662974,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031090,,,val,sda-all,samples/GSE299027/GSM9031090,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031091,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2022,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.533402568801713,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031091,,,val,sda-all,samples/GSE299027/GSM9031091,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031092,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,805,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.835548268003098,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9031092,,,val,sda-all,samples/GSE299027/GSM9031092,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031093,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2465,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.3763156154944465,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031093,,,val,sda-all,samples/GSE299027/GSM9031093,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9031094,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2268,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.34479370439839,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031094,,,val,sda-all,samples/GSE299027/GSM9031094,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031095,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2471,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9031095,,,val,sda-all,samples/GSE299027/GSM9031095,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031096,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1196,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.7933869625432814,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031096,,,val,sda-all,samples/GSE299027/GSM9031096,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9031097,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3377,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.4811306662618335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031097,,,val,sda-all,samples/GSE299027/GSM9031097,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9031098,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2345,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.490569091342601,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9031098,,,val,sda-all,samples/GSE299027/GSM9031098,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031099,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1164,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.6800705627540857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031099,,,val,sda-all,samples/GSE299027/GSM9031099,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031100,GSE299027,GSE299027,Molecular Characterization of Meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Fresh frozen human surgical samples,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2008,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.673935994052523,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031100,,,val,sda-all,samples/GSE299027/GSM9031100,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031941,GSE299051,GSE299051,Immune Dynamics in Palmoplantar Pustulosis Unveiled by Single-Cell and High-Resolution Spatial Transcriptomics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0015597,palmoplantar pustulosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,100038,18085,counts,um,1.0,verified,True,H&E-like (heuristic),0.9460136408936302,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41740929,,GSM9031941,,,val,sda-all,samples/GSE299051/GSM9031941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9031942,GSE299051,GSE299051,Immune Dynamics in Palmoplantar Pustulosis Unveiled by Single-Cell and High-Resolution Spatial Transcriptomics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0015597,palmoplantar pustulosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,84472,18085,counts,um,1.0,verified,True,H&E-like (heuristic),0.9464476822397502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41740929,,GSM9031942,,,val,sda-all,samples/GSE299051/GSM9031942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9032276,GSE299069,GSE299069,Actin Dysregulation Induces Neuroendocrine 1 Plasticity and 2 Immune Evasion: A Vulnerability of Small Cell Lung Cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Small Cell Lung Cancer,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,154818,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999934284641382,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41353272,,GSM9032276,,,train,sda-all,samples/GSE299069/GSM9032276,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9032277,GSE299069,GSE299069,Actin Dysregulation Induces Neuroendocrine 1 Plasticity and 2 Immune Evasion: A Vulnerability of Small Cell Lung Cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Small Cell Lung Cancer,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,342845,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500014079747691,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41353272,,GSM9032277,,,train,sda-all,samples/GSE299069/GSM9032277,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9034732,GSE299165,GSE299165,Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Kidney Cancer,tumour tissue,MONDO:0001734;MONDO:0002367;MONDO:0002603,tuberous sclerosis;kidney cancer;angiomyolipoma,disease,luna,Kidney Cancer,Kidney Cancer,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4938,18085,counts,pixel,9.36395645015989,platform_constant,True,H&E,9.36395645015989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41309810,,GSM9034732,,,train,hesrt,samples/GSE299165/GSM9034732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034733,GSE299165,GSE299165,Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Sporadic Angiomyolipoma,tumour tissue,MONDO:0002603,angiomyolipoma,disease,luna,angiomyolipoma,Sporadic Angiomyolipoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,7.343037215296924,platform_constant,True,H&E,7.343037215296924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41309810,,GSM9034733,,,train,hesrt,samples/GSE299165/GSM9034733,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9034734,GSE299165,GSE299165,Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Angiomyolipoma associated with Tuberous Sclerosis Complex,tumour tissue,MONDO:0001734;MONDO:0002603,tuberous sclerosis;angiomyolipoma,disease,luna,angiomyolipoma,Tuberous Sclerosis Complex-associated Angiomyolipoma,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3428,18085,counts,pixel,6.657821208364135,platform_constant,True,H&E,6.657821208364135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41309810,,GSM9034734,,,train,hesrt,samples/GSE299165/GSM9034734,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035023,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,primary tissue,,,normal,luna,,Ctrl,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51372,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999815452755906,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035023,,,train,sda-all,samples/GSE299193/GSM9035023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9035024,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,primary tissue,,,normal,luna,,Ctrl,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,84790,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.500001379995584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035024,,,train,sda-all,samples/GSE299193/GSM9035024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035025,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,primary tissue,,,normal,luna,,Ctrl,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75265,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000064770195346,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035025,,,train,sda-all,samples/GSE299193/GSM9035025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035026,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,primary tissue,,,normal,luna,,Ctrl,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,98646,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.499966958113054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035026,,,train,sda-all,samples/GSE299193/GSM9035026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035027,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,primary tissue,MONDO:0004225;MONDO:0000621;MONDO:0004959,monoclonal gammopathy of uncertain significance;immune system cancer;plasma cell neoplasm,disease,luna,,MGUS,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,162109,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917159109737,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035027,,,train,sda-all,samples/GSE299193/GSM9035027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035028,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,primary tissue,MONDO:0004225;MONDO:0000621;MONDO:0004959,monoclonal gammopathy of uncertain significance;immune system cancer;plasma cell neoplasm,disease,luna,,MGUS,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,172708,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997938994229185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035028,,,train,sda-all,samples/GSE299193/GSM9035028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035029,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,160479,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.499991935483871,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035029,,,train,sda-all,samples/GSE299193/GSM9035029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9035030,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,150922,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000017027652909,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035030,,,train,sda-all,samples/GSE299193/GSM9035030,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035031,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,124488,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998619852048143,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035031,,,train,sda-all,samples/GSE299193/GSM9035031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035032,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68334,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000029491565412,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035032,,,train,sda-all,samples/GSE299193/GSM9035032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035033,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,42857,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000154830718414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035033,,,train,sda-all,samples/GSE299193/GSM9035033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035034,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,136914,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996930422919506,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035034,,,train,sda-all,samples/GSE299193/GSM9035034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035035,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57291,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000350140056022,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035035,,,train,sda-all,samples/GSE299193/GSM9035035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035036,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,99208,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999827196903374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035036,,,train,sda-all,samples/GSE299193/GSM9035036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035037,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,69669,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000056420672534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035037,,,train,sda-all,samples/GSE299193/GSM9035037,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035038,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,MM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,31873,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998862320039705,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035038,,,train,sda-all,samples/GSE299193/GSM9035038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035039,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0005235,smoldering plasma cell myeloma,disease,luna,,SM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,65476,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896983682216,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035039,,,train,sda-all,samples/GSE299193/GSM9035039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035040,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0005235,smoldering plasma cell myeloma,disease,luna,,SM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,89052,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996325330720237,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035040,,,train,sda-all,samples/GSE299193/GSM9035040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035041,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0005235,smoldering plasma cell myeloma,disease,luna,,SM,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27271,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998463114754094,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035041,,,train,sda-all,samples/GSE299193/GSM9035041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035042,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0005235,smoldering plasma cell myeloma,disease,luna,,SM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,102798,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000234741784038,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035042,,,train,sda-all,samples/GSE299193/GSM9035042,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035043,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0005235,smoldering plasma cell myeloma,disease,luna,,SM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29613,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999522049451944,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035043,,,train,sda-all,samples/GSE299193/GSM9035043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035044,GSE299193+GSE299207,GSE299193,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,RM,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54315,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917776681466,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035044,,,train,sda-all,samples/GSE299193/GSM9035044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035090,GSE299207,GSE299207,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone marrow,luna,UBERON:0002371,bone marrow,,primary tissue,,,normal,luna,,Ctrl,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,246079,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961200206932,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035090,,,train,sda-all,samples/GSE299207/GSM9035090,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8983566,GSE299256,GSE299256,Positionally distinct interferon-stimulated dermal immune-acting fibroblasts promote neutrophil recruitment in Sweet's syndrome.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,cosmx,,,cell,71399,1013,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40516577,,GSM8983566,,,train,sda-all,samples/GSE299256/GSM8983566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.21, ""uberon"": 0.34, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9038185,GSE299374,GSE299374,Meningioma cell reprogramming and microenvironment interactions underlie brain invasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3783,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.42327799708551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41476144,,GSM9038185,,,train,sda-all,samples/GSE299374/GSM9038185,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9038186,GSE299374,GSE299374,Meningioma cell reprogramming and microenvironment interactions underlie brain invasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2959,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.42252065045899,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41476144,,GSM9038186,,,train,sda-all,samples/GSE299374/GSM9038186,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9038419,GSE299386,GSE299386,Comparative transcriptomics reveals differences in cortical cell type organization between metatherian and eutherian mammals [Stereo-seq],Monodelphis domestica,13616,gray short-tailed opossum,Monodelphis domestica,13616,,False,False,GEO organism field,Monodelphis domestica,Monodelphis domestica,brain,luna,UBERON:0001851,cortex,Cortex,primary tissue,,,normal,luna,,,adult,luna,adult,6 months,male,extracted field,male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,80369,30613,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,42005962,,GSM9038419,,,train,sda-all,samples/GSE299386/GSM9038419,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9038420,GSE299386,GSE299386,Comparative transcriptomics reveals differences in cortical cell type organization between metatherian and eutherian mammals [Stereo-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001851,cortex,Cortex,primary tissue,,,normal,luna,,,juvenile,age rule: postnatal day,juvenile,P40,male,extracted field,male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,120239,61317,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,42005962,,GSM9038420,,,train,sda-all,samples/GSE299386/GSM9038420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9039187,GSE299434,GSE299434,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,,"Vehicle (0.9% saline, 5% PEG400 and 5% TWEEN-80)",adult,age rule: age range midpoint,juvenile,5-7 weeks,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,221794,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092524056254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039187,,,train,sda-all,samples/GSE299434/GSM9039187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9039188,GSE299434,GSE299434,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,,CBL0137,adult,age rule: age range midpoint,juvenile,5-7 weeks,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,226967,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000065316786414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039188,,,train,sda-all,samples/GSE299434/GSM9039188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9039189,GSE299434,GSE299434,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,,JQ1,adult,age rule: age range midpoint,juvenile,5-7 weeks,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,210460,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000021765627721,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039189,,,train,sda-all,samples/GSE299434/GSM9039189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9039190,GSE299434,GSE299434,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,,CBL0137 + JQ1,adult,age rule: age range midpoint,juvenile,5-7 weeks,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,129253,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.500004018738805,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039190,,,train,sda-all,samples/GSE299434/GSM9039190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9039782,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1268,37952,counts,um,1.0,verified,True,H&E,4.168371971228302,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039782,,,train,sda-all,samples/GSE299494/GSM9039782,sda-tissue-disease-2.5,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9039783,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,unknown,luna,,,tumor,metastasis,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1466,37952,counts,um,1.0,verified,True,H&E,4.1687258862226,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039783,,,train,sda-all,samples/GSE299494/GSM9039783,sda-tissue-disease-2.5,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9039784,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2345,37952,counts,um,1.0,verified,True,H&E,4.169454683935197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039784,,,train,sda-all,samples/GSE299494/GSM9039784,sda-tissue-disease-2.5,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9039785,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,unknown,luna,,,tumor,metastasis,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1933,37952,counts,um,1.0,verified,True,H&E,4.1688943381325005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039785,,,train,sda-all,samples/GSE299494/GSM9039785,sda-tissue-disease-2.5,"{""organ"": 0.73, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9039786,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,998,37952,counts,um,1.0,verified,True,H&E,4.169136781803582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039786,,,train,sda-all,samples/GSE299494/GSM9039786,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM9039787,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1039,37952,counts,um,1.0,verified,True,H&E,4.168803285108796,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039787,,,train,sda-all,samples/GSE299494/GSM9039787,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9039788,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1993,37952,counts,um,1.0,verified,True,H&E,4.168080227043663,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039788,,,train,sda-all,samples/GSE299494/GSM9039788,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9039789,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1765,37952,counts,um,1.0,verified,True,H&E,4.170675788309616,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039789,,,train,sda-all,samples/GSE299494/GSM9039789,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM9039790,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1071,37952,counts,um,1.0,verified,True,H&E,4.169188425110498,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039790,,,train,sda-all,samples/GSE299494/GSM9039790,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9039791,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1232,37952,counts,um,1.0,verified,True,H&E,4.169206854389578,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039791,,,train,sda-all,samples/GSE299494/GSM9039791,sda-tissue-disease-2.5,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9039792,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,982,37952,counts,um,1.0,verified,True,H&E,4.171179582920709,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039792,,,train,sda-all,samples/GSE299494/GSM9039792,sda-tissue-disease-2.5,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM9039793,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1896,37952,counts,um,1.0,verified,True,H&E,4.171362510802886,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039793,,,train,sda-all,samples/GSE299494/GSM9039793,sda-tissue-disease-2.5,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9039794,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1514,37952,counts,um,1.0,verified,True,H&E,4.170419045834522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039794,,,train,sda-all,samples/GSE299494/GSM9039794,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9039795,GSE299494,GSE299494,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,bone,luna,UBERON:0002481,bone tissue,tumor,tumour tissue,MONDO:0700140;MONDO:0009807,canine osteosarcoma;osteosarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1185,37952,counts,um,1.0,verified,True,H&E,4.170884539903666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039795,,,train,sda-all,samples/GSE299494/GSM9039795,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9040999,GSE299573,GSE299573,Spatial transcriptomics of bladder cancer with squamous differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder cancer,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,695646,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.2314471035838173,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41917522,,GSM9040999,,,train,sda-all,samples/GSE299573/GSM9040999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9042005,GSE299610,GSE299610,Subclinical Neonatal HSV-1 Infection Triggers Immune Responses and Modulates Neurological Pathways Leading to Long-Term Sequelae [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Infection with 100PFU HSV-1,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,5990,19472,counts,um,1.0,verified,True,H&E-like (heuristic),5.5317042160215495,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9042005,,,train,sda-all,samples/GSE299610/GSM9042005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM9042006,GSE299610,GSE299610,Subclinical Neonatal HSV-1 Infection Triggers Immune Responses and Modulates Neurological Pathways Leading to Long-Term Sequelae [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole brain,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Infection with mockulum,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,6198,32596,counts,um,1.0,verified,True,H&E-like (heuristic),5.529716625986959,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9042006,,,train,sda-all,samples/GSE299610/GSM9042006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9042305,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2154,19465,counts,pixel,4.103527782749221,platform_constant,True,H&E,4.103527782749221,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042305,,,train,hesrt,samples/GSE299631/GSM9042305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9042306,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,925,19465,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042306,,,train,hesrt,samples/GSE299631/GSM9042306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9042307,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2147,19465,counts,pixel,4.08831036850946,platform_constant,True,H&E,4.08831036850946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042307,,,train,hesrt,samples/GSE299631/GSM9042307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042308,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1233,19465,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042308,,,train,hesrt,samples/GSE299631/GSM9042308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9042309,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,Mammary gland,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1047,19465,counts,pixel,4.0883103685094655,platform_constant,True,H&E,4.0883103685094655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042309,,,train,hesrt,samples/GSE299631/GSM9042309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9042310,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2057,19465,counts,pixel,4.088310368509453,platform_constant,True,H&E,4.088310368509453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042310,,,train,hesrt,samples/GSE299631/GSM9042310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042311,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,822,19465,counts,pixel,4.088310368509453,platform_constant,True,H&E,4.088310368509453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042311,,,train,hesrt,samples/GSE299631/GSM9042311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042312,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1057,19465,counts,pixel,4.088310368509446,platform_constant,True,H&E,4.088310368509446,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042312,,,train,hesrt,samples/GSE299631/GSM9042312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042313,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3448,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042313,,,train,hesrt,samples/GSE299631/GSM9042313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9042314,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2470,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042314,,,train,hesrt,samples/GSE299631/GSM9042314,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042315,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2130,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042315,,,train,hesrt,samples/GSE299631/GSM9042315,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042316,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2267,19465,counts,pixel,4.103527782749201,platform_constant,True,H&E,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042316,,,train,hesrt,samples/GSE299631/GSM9042316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042317,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3019,19465,counts,pixel,4.088310368509449,platform_constant,True,H&E,4.088310368509449,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042317,,,train,hesrt,samples/GSE299631/GSM9042317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042318,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3692,19465,counts,pixel,4.088310368509449,platform_constant,True,H&E,4.088310368509449,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042318,,,train,hesrt,samples/GSE299631/GSM9042318,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042319,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1325,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042319,,,train,hesrt,samples/GSE299631/GSM9042319,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9042320,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3907,19465,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042320,,,train,hesrt,samples/GSE299631/GSM9042320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042321,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3561,19465,counts,pixel,4.103527782749239,platform_constant,True,H&E,4.103527782749239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042321,,,train,hesrt,samples/GSE299631/GSM9042321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042322,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1833,19465,counts,pixel,4.103527782749201,platform_constant,True,H&E,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042322,,,train,hesrt,samples/GSE299631/GSM9042322,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9042323,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,TAC regimen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4499,19465,counts,pixel,4.103527782749239,platform_constant,True,H&E,4.103527782749239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042323,,,train,hesrt,samples/GSE299631/GSM9042323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042324,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2806,19465,counts,pixel,4.088310368509435,platform_constant,True,H&E,4.088310368509435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042324,,,train,hesrt,samples/GSE299631/GSM9042324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9042325,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2440,19465,counts,pixel,4.088310368509453,platform_constant,True,H&E,4.088310368509453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042325,,,train,hesrt,samples/GSE299631/GSM9042325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9042326,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2790,19465,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042326,,,train,hesrt,samples/GSE299631/GSM9042326,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042327,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2888,19465,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042327,,,train,hesrt,samples/GSE299631/GSM9042327,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9042328,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4371,19465,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042328,,,train,hesrt,samples/GSE299631/GSM9042328,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9042329,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2695,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042329,,,train,hesrt,samples/GSE299631/GSM9042329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042330,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2776,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042330,,,train,hesrt,samples/GSE299631/GSM9042330,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042331,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3461,19465,counts,pixel,4.088310368509479,platform_constant,True,H&E,4.088310368509479,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042331,,,train,hesrt,samples/GSE299631/GSM9042331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042332,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 12mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4382,19465,counts,pixel,4.088310368509463,platform_constant,True,H&E,4.088310368509463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042332,,,train,hesrt,samples/GSE299631/GSM9042332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9042333,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2590,19465,counts,pixel,4.103527782749201,platform_constant,True,H&E,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042333,,,train,hesrt,samples/GSE299631/GSM9042333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042334,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2771,19465,counts,pixel,4.103527782749201,platform_constant,True,H&E,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042334,,,train,hesrt,samples/GSE299631/GSM9042334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042335,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3605,19465,counts,pixel,4.08831036850946,platform_constant,True,H&E,4.08831036850946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042335,,,train,hesrt,samples/GSE299631/GSM9042335,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9042336,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,KB1P mammary tumor,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,cisplatin 6mg/kg,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3224,19465,counts,pixel,4.10370368466251,platform_constant,True,H&E,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042336,,,train,hesrt,samples/GSE299631/GSM9042336,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042337,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Triple-negative breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,neoadjuvant chemotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4458,17943,counts,pixel,4.08831036850946,platform_constant,True,H&E,4.08831036850946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042337,,,train,hesrt,samples/GSE299631/GSM9042337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042338,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Triple-negative breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,neoadjuvant chemotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4807,17943,counts,pixel,4.103527782749201,platform_constant,True,H&E,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042338,,,train,hesrt,samples/GSE299631/GSM9042338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9042339,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Triple-negative breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4243,17943,counts,pixel,4.103527782749201,platform_constant,True,H&E,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042339,,,train,hesrt,samples/GSE299631/GSM9042339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9042340,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Triple-negative breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1094,17943,counts,pixel,4.088310368509443,platform_constant,True,H&E,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042340,,,train,hesrt,samples/GSE299631/GSM9042340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9042341,GSE299631,GSE299631,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,Triple-negative breast cancer,tumour tissue,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,neoadjuvant chemotherapy,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4467,18085,counts,pixel,3.702199993924956,platform_constant,True,H&E,3.702199993924956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042341,,,train,hesrt,samples/GSE299631/GSM9042341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9043133,GSE299660,GSE299660,Spatial transcriptomic profiling of seborrhoeic keratoses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0006566,keratosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4363,18085,counts,um,1.0,verified,True,H&E-like (heuristic),9.321511565839367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043133,,,train,sda-all,samples/GSE299660/GSM9043133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9043134,GSE299660,GSE299660,Spatial transcriptomic profiling of seborrhoeic keratoses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0006566,keratosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4546,18085,counts,um,1.0,verified,True,H&E-like (heuristic),10.11673721524642,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043134,,,train,sda-all,samples/GSE299660/GSM9043134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9043135,GSE299660,GSE299660,Spatial transcriptomic profiling of seborrhoeic keratoses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0006566,keratosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4660,18085,counts,um,1.0,verified,True,H&E-like (heuristic),14.497126511060182,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043135,,,train,sda-all,samples/GSE299660/GSM9043135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9043136,GSE299660,GSE299660,Spatial transcriptomic profiling of seborrhoeic keratoses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,tumour tissue,MONDO:0006566,keratosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3808,18085,counts,um,1.0,verified,True,H&E-like (heuristic),8.045761447701388,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043136,,,train,sda-all,samples/GSE299660/GSM9043136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9045881,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0020683,acute disease,disease,mondo_predicate (Luna: perturbation),,intracoronary infusion of saline,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3269,25399,counts,pixel,4.781624464973892,platform_constant,True,H&E,4.781624464973892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045881,,,train,hesrt,samples/GSE299772/GSM9045881,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045882,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0020683,acute disease,disease,mondo_predicate,,intracoronary infusion of saline,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3880,25399,counts,pixel,4.769565365247829,platform_constant,True,H&E,4.769565365247829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045882,,,train,hesrt,samples/GSE299772/GSM9045882,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045883,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0004781,acute myocardial infarction,disease,luna,,intracoronary infusion of iECM,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4465,25399,counts,pixel,4.6786233809077515,platform_constant,True,H&E,4.6786233809077515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045883,,,train,hesrt,samples/GSE299772/GSM9045883,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9045884,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0004781,acute myocardial infarction,disease,luna,,intracoronary infusion of iECM,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3553,25399,counts,pixel,5.114827085110209,platform_constant,True,H&E,5.114827085110209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045884,,,train,hesrt,samples/GSE299772/GSM9045884,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9045885,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0020683,acute disease,disease,mondo_predicate,,intracoronary infusion of saline,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3787,25399,counts,pixel,4.515328489278397,platform_constant,True,H&E,4.515328489278397,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045885,,,train,hesrt,samples/GSE299772/GSM9045885,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045886,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,,,normal,luna,,intracoronary infusion of saline,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3685,25399,counts,pixel,5.567004586422417,platform_constant,True,H&E,5.567004586422417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045886,,,train,hesrt,samples/GSE299772/GSM9045886,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045887,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0004781,acute myocardial infarction,disease,luna,,intracoronary infusion of iECM,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3709,25399,counts,pixel,4.345620488061208,platform_constant,True,H&E,4.345620488061208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045887,,,train,hesrt,samples/GSE299772/GSM9045887,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045888,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0004781,acute myocardial infarction,disease,luna,,intracoronary infusion of iECM,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4288,25399,counts,pixel,4.643672084569415,platform_constant,True,H&E,4.643672084569415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045888,,,train,hesrt,samples/GSE299772/GSM9045888,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9045889,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0020683,acute disease,disease,mondo_predicate,,intracoronary infusion of saline,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3675,25399,counts,pixel,4.90064998699207,platform_constant,True,H&E,4.90064998699207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045889,,,train,hesrt,samples/GSE299772/GSM9045889,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045890,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0020683,acute disease,disease,mondo_predicate,,intracoronary infusion of saline,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3361,25399,counts,pixel,4.352241131362407,platform_constant,True,H&E,4.352241131362407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045890,,,train,hesrt,samples/GSE299772/GSM9045890,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045891,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0004781,acute myocardial infarction,disease,luna,,intracoronary infusion of iECM,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4458,25399,counts,pixel,4.594929016580272,platform_constant,True,H&E,4.594929016580272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045891,,,train,hesrt,samples/GSE299772/GSM9045891,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9045892,GSE299772,GSE299772,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,heart,luna,UBERON:0000948,heart,cardiac,primary tissue,MONDO:0004781,acute myocardial infarction,disease,luna,,intracoronary infusion of iECM,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4231,25399,counts,pixel,4.892442211639357,platform_constant,True,H&E,4.892442211639357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045892,,,train,hesrt,samples/GSE299772/GSM9045892,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9045933,GSE299776,GSE299776,Virus-Human Chromatin Interactions Reorganise 3D Genome and Hijack KDM5B for Promoting Metastasis in Nasopharyngeal Carcinoma [10X Visum Spatial Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,NPC biopsy,tumour tissue,MONDO:0015459,nasopharyngeal carcinoma,disease,luna,nasopharyngeal carcinoma,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1570,36601,counts,pixel,4.045093436322902,platform_constant,True,H&E,4.045093436322902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40759888,,GSM9045933,,,train,hesrt,samples/GSE299776/GSM9045933,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9046088,GSE299786,GSE299786,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,43565,1010,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41006245,,GSM9046088,,,train,sda-all,samples/GSE299786/GSM9046088,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046089,GSE299786,GSE299786,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,39123,1010,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9046089,,,train,sda-all,samples/GSE299786/GSM9046089,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046090,GSE299786,GSE299786,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,60395,1010,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41006245,,GSM9046090,,,train,sda-all,samples/GSE299786/GSM9046090,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9046091,GSE299786,GSE299786,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,46955,1010,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41006245,,GSM9046091,,,train,sda-all,samples/GSE299786/GSM9046091,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9046442,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:M_2,M_2,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,59825,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999840153452686,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046442,,,train,sda-all,samples/GSE299810/GSM9046442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046443,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:M_3,M_3,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,54056,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000169287487773,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046443,,,train,sda-all,samples/GSE299810/GSM9046443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046444,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:M_4,M_4,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,58693,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000155048375092,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046444,,,train,sda-all,samples/GSE299810/GSM9046444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046445,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:M_5,M_5,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,55882,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000009404860432,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046445,,,train,sda-all,samples/GSE299810/GSM9046445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9046446,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:F_2,F_2,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,55651,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034441587069,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046446,,,train,sda-all,samples/GSE299810/GSM9046446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9046447,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:F_3,F_3,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,58778,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000245249896736,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046447,,,train,sda-all,samples/GSE299810/GSM9046447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046448,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:F_4,F_4,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,54624,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000124120810923,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046448,,,train,sda-all,samples/GSE299810/GSM9046448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9046449,GSE299810,GSE299810,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain hemisection,primary tissue,,,normal,luna,,WT mouse,not stated,luna,not stated,,unknown,not stated,,GSE299810:F_5,F_5,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,53017,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999780701754386,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046449,,,train,sda-all,samples/GSE299810/GSM9046449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046518,GSE299816,GSE299816,Differential expression analysis in single cell and spatial RNASeq without model assumptions,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0000979,tibia,tibia,primary tissue,,,normal,luna,,wild type,embryonic,age rule: embryonic day,embryonic,18.5 embryonic days,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,330212,19070,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9046518,,,train,hesrt,samples/GSE299816/GSM9046518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9049384,GSE299886,GSE299886,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,165205,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,41006245,,GSM9049384,,,test,sda-all,samples/GSE299886/GSM9049384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9049385,GSE299886,GSE299886,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,205768,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,41006245,,GSM9049385,,,test,sda-all,samples/GSE299886/GSM9049385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9049386,GSE299886,GSE299886,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,153981,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,41006245,,GSM9049386,,,test,sda-all,samples/GSE299886/GSM9049386,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9049686,GSE299911,GSE299911,Chronic periodontitis induces neurobehavioral deficits via microbiota–glia–endocrine interactions,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001870,frontal cortex,Frontal cortex,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1922,32589,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,,,GSM9049686,,,train,sda-all,samples/GSE299911/GSM9049686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9049687,GSE299911,GSE299911,Chronic periodontitis induces neurobehavioral deficits via microbiota–glia–endocrine interactions,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001870,frontal cortex,Frontal cortex,primary tissue,MONDO:0005593,chronic periodontitis,disease,mondo_predicate (Luna: perturbation),,Ligature-induced periodontitis,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1936,19465,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,,,GSM9049687,,,train,sda-all,samples/GSE299911/GSM9049687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9051173,GSE299970,GSE299970,10X Visium Spatial transcriptomics of pancreatic caner patient tissue.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic cancer tissue,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,pancreatic cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4611,18085,counts,pixel,5.494441424328192,platform_constant,True,H&E,5.494441424328192,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41722836,,GSM9051173,,,train,hesrt,samples/GSE299970/GSM9051173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052317,GSE300007,GSE300007,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,136831,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052317,,,train,sda-all,samples/GSE300007/GSM9052317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9052318,GSE300007,GSE300007,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117654,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052318,,,train,sda-all,samples/GSE300007/GSM9052318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9052319,GSE300007,GSE300007,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,145692,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052319,,,train,sda-all,samples/GSE300007/GSM9052319,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9052320,GSE300007,GSE300007,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,134530,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052320,,,train,sda-all,samples/GSE300007/GSM9052320,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9052321,GSE300007,GSE300007,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,86150,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052321,,,train,sda-all,samples/GSE300007/GSM9052321,sda-tissue-disease-2.3,"{""organ"": 0.34, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.24, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9052322,GSE300007,GSE300007,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,72028,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052322,,,train,sda-all,samples/GSE300007/GSM9052322,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9052535,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,mondo_predicate,,Control,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2196,19465,counts,um,1.0,verified,True,H&E-like (heuristic),13.552991489582967,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052535,,,train,sda-all,samples/GSE300023/GSM9052535,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9052536,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,,mAb pre-treatment,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2334,19465,counts,um,1.0,verified,True,H&E-like (heuristic),13.552515488600005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052536,,,train,sda-all,samples/GSE300023/GSM9052536,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052537,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,,SARS-CoV-2 virus challenge,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2445,19465,counts,um,1.0,verified,True,H&E-like (heuristic),15.245612526168024,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052537,,,train,sda-all,samples/GSE300023/GSM9052537,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9052538,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,,mAb pre-treatment & SARS-CoV-2 virus challenge,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2225,19465,counts,um,1.0,verified,True,H&E-like (heuristic),13.550725978414862,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052538,,,train,sda-all,samples/GSE300023/GSM9052538,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052539,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,mondo_predicate,,Control,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2237,19465,counts,um,1.0,verified,True,H&E-like (heuristic),13.542627441460256,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052539,,,train,sda-all,samples/GSE300023/GSM9052539,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9052540,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,,mAb pre-treatment,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2245,19465,counts,um,1.0,verified,True,H&E-like (heuristic),14.257446163582312,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052540,,,train,sda-all,samples/GSE300023/GSM9052540,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052542,GSE300023,GSE300023,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0100096,COVID-19,disease,luna,,mAb pre-treatment & SARS-CoV-2 virus challenge,not stated,luna,not stated,,female,sample text,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2393,19465,counts,um,1.0,verified,True,H&E-like (heuristic),14.272105748643595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052542,,,train,sda-all,samples/GSE300023/GSM9052542,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9053839,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L1,adult,age rule: bare number read as years,not stated,44,female,extracted field,female,GSE300112:P020,P020,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2966,36601,counts,pixel,4.0537004333313345,platform_constant,True,H&E,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053839,,,train,hesrt,samples/GSE300112/GSM9053839,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053840,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L1,adult,age rule: bare number read as years,not stated,47,female,extracted field,female,GSE300112:P045,P045,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,697,36601,counts,pixel,4.0537004333313345,platform_constant,True,H&E,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053840,,,train,hesrt,samples/GSE300112/GSM9053840,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9053841,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L1,adult,age rule: bare number read as years,not stated,30,female,extracted field,female,GSE300112:P050,P050,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1692,36601,counts,pixel,4.0537004333313345,platform_constant,True,H&E,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053841,,,train,hesrt,samples/GSE300112/GSM9053841,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9053842,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L1,adult,age rule: bare number read as years,not stated,32,female,extracted field,female,GSE300112:P057,P057,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2387,36601,counts,pixel,4.0537004333313345,platform_constant,True,H&E,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053842,,,train,hesrt,samples/GSE300112/GSM9053842,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9053843,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L3,adult,age rule: bare number read as years,not stated,43,female,extracted field,female,GSE300112:P001,P001,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1379,36601,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053843,,,train,hesrt,samples/GSE300112/GSM9053843,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053844,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L3,adult,age rule: bare number read as years,not stated,48,female,extracted field,female,GSE300112:P014,P014,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1988,36601,counts,pixel,4.185886509912564,platform_constant,True,H&E,4.185886509912564,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053844,,,train,hesrt,samples/GSE300112/GSM9053844,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9053845,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L3,adult,age rule: bare number read as years,not stated,48,female,extracted field,female,GSE300112:P018,P018,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1808,36601,counts,pixel,4.185886509912559,platform_constant,True,H&E,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053845,,,train,hesrt,samples/GSE300112/GSM9053845,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9053846,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L3,adult,age rule: bare number read as years,not stated,32,female,extracted field,female,GSE300112:P087,P087,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1040,36601,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053846,,,train,hesrt,samples/GSE300112/GSM9053846,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053847,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L4,adult,age rule: bare number read as years,not stated,43,female,extracted field,female,GSE300112:P021,P021,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1831,36601,counts,pixel,4.185886509912569,platform_constant,True,H&E,4.185886509912569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053847,,,train,hesrt,samples/GSE300112/GSM9053847,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053848,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L4,adult,age rule: bare number read as years,not stated,36,female,extracted field,female,GSE300112:P024,P024,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1167,36601,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053848,,,train,hesrt,samples/GSE300112/GSM9053848,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9053849,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L4,adult,age rule: bare number read as years,not stated,37,female,extracted field,female,GSE300112:P081,P081,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1005,36601,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053849,,,train,hesrt,samples/GSE300112/GSM9053849,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053850,GSE217237+GSE300112,GSE300112,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0012249,ectocervix,ectocervix,primary tissue,,,normal,luna,,L4,adult,age rule: bare number read as years,not stated,25,female,extracted field,female,GSE300112:P117,P117,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1283,36601,counts,pixel,4.185886509912579,platform_constant,True,H&E,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053850,,,train,hesrt,samples/GSE300112/GSM9053850,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9054471,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27775,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999914277876834,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054471,,,train,sda-all,samples/GSE300147/GSM9054471,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054472,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,175174,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092890760466,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054472,,,train,sda-all,samples/GSE300147/GSM9054472,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054473,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,268328,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000008611780916,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054473,,,train,sda-all,samples/GSE300147/GSM9054473,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054474,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63982,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998455942904196,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054474,,,train,sda-all,samples/GSE300147/GSM9054474,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054475,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43759,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999814936667215,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054475,,,train,sda-all,samples/GSE300147/GSM9054475,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054476,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34060,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020549071181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054476,,,train,sda-all,samples/GSE300147/GSM9054476,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054477,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29743,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999589827727645,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054477,,,train,sda-all,samples/GSE300147/GSM9054477,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054478,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,31707,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000147284081536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054478,,,train,sda-all,samples/GSE300147/GSM9054478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054479,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,62220,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998658022958126,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054479,,,train,sda-all,samples/GSE300147/GSM9054479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054480,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,86435,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998968753222645,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054480,,,train,sda-all,samples/GSE300147/GSM9054480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054481,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001737,larynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23496,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000164500740253,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054481,,,train,sda-all,samples/GSE300147/GSM9054481,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054482,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001737,larynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59995,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999613362202283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054482,,,train,sda-all,samples/GSE300147/GSM9054482,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054483,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001051,hypopharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24109,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041118421052,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054483,,,train,sda-all,samples/GSE300147/GSM9054483,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054484,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001051,hypopharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37878,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000220874072329,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054484,,,train,sda-all,samples/GSE300147/GSM9054484,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054485,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,88466,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000176512120499,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054485,,,train,sda-all,samples/GSE300147/GSM9054485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054486,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,39583,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999264532831256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054486,,,train,sda-all,samples/GSE300147/GSM9054486,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054487,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51534,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000146370023419,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054487,,,train,sda-all,samples/GSE300147/GSM9054487,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054488,GSE300147,GSE300147,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,,tumour tissue,MONDO:0017795;MONDO:0004992,ameloblastoma;cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38672,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999941141848146,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054488,,,train,sda-all,samples/GSE300147/GSM9054488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9057740,GSE300289,GSE300289,Early lineage divergence segregates sensory-related and motor-associative identities in the thalamus [Spatial Transcriptomics E17],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Thalamus,primary tissue,,,normal,luna,,ICR/CD-1,embryonic,age rule: embryonic day,embryonic,Embryonic day 17.5,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,822395,32361,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9057740,,,train,sda-all,samples/GSE300289/GSM9057740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057760,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,NNK,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3277,19465,counts,pixel,4.324497375281349,platform_constant,True,H&E,4.324497375281349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057760,,,train,hesrt,samples/GSE300293/GSM9057760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057761,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2957,19465,counts,pixel,4.1972229795430795,platform_constant,True,H&E,4.1972229795430795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057761,,,train,hesrt,samples/GSE300293/GSM9057761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057762,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3262,19465,counts,pixel,4.21443390400474,platform_constant,True,H&E,4.21443390400474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057762,,,train,hesrt,samples/GSE300293/GSM9057762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057763,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2477,19465,counts,pixel,4.369207408724802,platform_constant,True,H&E,4.369207408724802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057763,,,train,hesrt,samples/GSE300293/GSM9057763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057764,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1772,19465,counts,pixel,4.1800119956465025,platform_constant,True,H&E,4.1800119956465025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057764,,,train,hesrt,samples/GSE300293/GSM9057764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057765,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,NNK,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2495,19465,counts,pixel,4.2488560101316395,platform_constant,True,H&E,4.2488560101316395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057765,,,train,hesrt,samples/GSE300293/GSM9057765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9057766,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,NNK,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1935,19465,counts,pixel,4.2488560101316395,platform_constant,True,H&E,4.2488560101316395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057766,,,train,hesrt,samples/GSE300293/GSM9057766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9057767,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,NNK,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2908,19465,counts,pixel,4.094082424778427,platform_constant,True,H&E,4.094082424778427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057767,,,train,hesrt,samples/GSE300293/GSM9057767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9057768,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,NNK,adult,age rule: age with unit,adult,4 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3195,19465,counts,pixel,4.042449544515902,platform_constant,True,H&E,4.042449544515902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057768,,,train,hesrt,samples/GSE300293/GSM9057768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057769,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3658,19465,counts,pixel,4.2198359418017795,platform_constant,True,H&E,4.2198359418017795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057769,,,train,hesrt,samples/GSE300293/GSM9057769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057770,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1884,19465,counts,pixel,4.25463458565372,platform_constant,True,H&E,4.25463458565372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057770,,,train,hesrt,samples/GSE300293/GSM9057770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057771,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Saline,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2705,19465,counts,pixel,4.115187963412145,platform_constant,True,H&E,4.115187963412145,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057771,,,train,hesrt,samples/GSE300293/GSM9057771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057772,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,mondo_predicate (Luna: perturbation),,Saline,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3137,19465,counts,pixel,3.9932030148361006,platform_constant,True,H&E,3.9932030148361006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057772,,,train,hesrt,samples/GSE300293/GSM9057772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057773,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004993;MONDO:0024276,carcinoma;glandular cell neoplasm,disease,luna,,Control IgG,adult,age rule: age with unit,adult,7 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7687,19465,counts,pixel,5.562644338997641,platform_constant,True,H&E,5.562644338997641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057773,,,train,hesrt,samples/GSE300293/GSM9057773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.47000000000000003, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057774,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004970;MONDO:0005233,adenocarcinoma;non-small cell lung carcinoma,disease,luna,,anti-IL-1β,adult,age rule: age with unit,adult,7 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8667,19465,counts,pixel,5.597139866554024,platform_constant,True,H&E,5.597139866554024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057774,,,train,hesrt,samples/GSE300293/GSM9057774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.4, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057775,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005233;MONDO:0024276,non-small cell lung carcinoma;glandular cell neoplasm,disease,mondo_predicate (Luna: perturbation),,anti-IL-1β,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11169,19465,counts,pixel,6.267316685923242,platform_constant,True,H&E,6.267316685923242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057775,,,train,hesrt,samples/GSE300293/GSM9057775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.4, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057776,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,Control IgG,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9131,19465,counts,pixel,6.018757890199108,platform_constant,True,H&E,6.018757890199108,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057776,,,train,hesrt,samples/GSE300293/GSM9057776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.55, ""uberon"": 0.75, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9057777,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0004993;MONDO:0024276,carcinoma;glandular cell neoplasm,disease,mondo_predicate (Luna: perturbation),,anti-IL-1β,adult,age rule: age with unit,adult,7 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7366,19465,counts,pixel,6.500812572972461,platform_constant,True,H&E,6.500812572972461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057777,,,train,hesrt,samples/GSE300293/GSM9057777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.32, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057778,GSE300293,GSE300293,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005233;MONDO:0024276,non-small cell lung carcinoma;glandular cell neoplasm,disease,luna,,anti-IL-1β,adult,age rule: age with unit,adult,11 months,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8218,19465,counts,pixel,5.650546595929875,platform_constant,True,H&E,5.650546595929875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057778,,,train,hesrt,samples/GSE300293/GSM9057778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.39, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9058063,GSE300303,GSE300303,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0004454,tarsal region,ankle,primary tissue,,,normal,luna,,mock infected mice,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64923,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.500006899406651,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058063,,,train,sda-all,samples/GSE300303/GSM9058063,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9058064,GSE300303,GSE300303,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0004454,tarsal region,ankle,primary tissue,MONDO:0100120,vector-borne disease,disease,mondo_predicate,,mock infected mice,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63172,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499988506803972,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058064,,,train,sda-all,samples/GSE300303/GSM9058064,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9058065,GSE300303,GSE300303,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0004454,tarsal region,ankle,primary tissue,,,normal,luna,,mock infected mice,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60934,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059910243562,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058065,,,train,sda-all,samples/GSE300303/GSM9058065,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9058066,GSE300303,GSE300303,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0004454,tarsal region,ankle,primary tissue,MONDO:0017941,chikungunya,disease,luna,,CHIKV infected mice,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,82029,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054763179672,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058066,,,train,sda-all,samples/GSE300303/GSM9058066,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9058067,GSE300303,GSE300303,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0004454,tarsal region,ankle,primary tissue,MONDO:0017941,chikungunya,disease,luna,,CHIKV infected mice,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,79359,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000086210860268,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058067,,,train,sda-all,samples/GSE300303/GSM9058067,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9058068,GSE300303,GSE300303,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0004454,tarsal region,ankle,primary tissue,MONDO:0017941,chikungunya,disease,luna,,CHIKV infected mice,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,87457,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000091276409308,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058068,,,train,sda-all,samples/GSE300303/GSM9058068,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9059352,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2105,18066,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059352,,,val,hesrt,samples/GSE300380/GSM9059352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9059353,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1926,18066,counts,pixel,4.856429311786321,platform_constant,True,H&E,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059353,,,val,hesrt,samples/GSE300380/GSM9059353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9059354,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1332,18066,counts,pixel,4.740454631399772,platform_constant,True,H&E,4.740454631399772,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059354,,,val,hesrt,samples/GSE300380/GSM9059354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9059355,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1566,18066,counts,pixel,4.761904761904762,platform_constant,True,H&E,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059355,,,val,hesrt,samples/GSE300380/GSM9059355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9059356,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1293,36945,counts,pixel,0.3076908511710158,platform_constant,True,H&E,0.5000106371052493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059356,,,val,hesrt,samples/GSE300380/GSM9059356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9059357,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,989,36945,counts,pixel,0.3086360952378595,platform_constant,True,H&E,0.49999706277565265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059357,,,val,hesrt,samples/GSE300380/GSM9059357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9059358,GSE300380,GSE300380,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,cutaneous KS tumor,tumour tissue,MONDO:0005055,Kaposi's sarcoma,disease,luna,Kaposi sarcoma,cutaneous KS tumor,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1089,36945,counts,pixel,0.3076908511710158,platform_constant,True,H&E,0.5000106371052493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059358,,,val,hesrt,samples/GSE300380/GSM9059358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9060605,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,234275,19040,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",0.62351823392168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060605,,,train,sda-all,samples/GSE300434/GSM9060605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060606,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,perturbation,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,371062,19040,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",0.6240029316095352,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42493549,,GSM9060606,,,train,sda-all,samples/GSE300434/GSM9060606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060607,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,427132,19040,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",0.6239602028320056,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060607,,,train,sda-all,samples/GSE300434/GSM9060607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9060608,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,470110,19040,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",0.6236431497900552,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42493549,,GSM9060608,,,train,sda-all,samples/GSE300434/GSM9060608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060609,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,416799,19040,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42493549,,GSM9060609,,,train,sda-all,samples/GSE300434/GSM9060609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9060610,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,293192,19040,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42493549,,GSM9060610,,,train,sda-all,samples/GSE300434/GSM9060610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060611,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,320894,19040,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",0.6238847734231852,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060611,,,train,sda-all,samples/GSE300434/GSM9060611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9060612,GSE300434,GSE300434,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0008930,somatosensory cortex,Somatosensory cortex,primary tissue,,,disease,luna,,AQP4-IgG injection,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,341313,19040,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",0.6239801340600175,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060612,,,train,sda-all,samples/GSE300434/GSM9060612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060732,GSE300445,GSE300445,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous melanoma,tumour tissue,MONDO:0005012,cutaneous melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2539,18085,counts,um,1.0,verified,True,H&E,4.560673621784541,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060732,,,train,sda-all,samples/GSE300445/GSM9060732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9060733,GSE300445,GSE300445,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous melanoma,tumour tissue,MONDO:0005012,cutaneous melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2783,18085,counts,um,1.0,verified,True,H&E,5.378393762196788,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060733,,,train,sda-all,samples/GSE300445/GSM9060733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9060734,GSE300445,GSE300445,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous melanoma,tumour tissue,MONDO:0005012,cutaneous melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2145,18085,counts,um,1.0,verified,True,H&E,6.91195569305303,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060734,,,train,sda-all,samples/GSE300445/GSM9060734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9060735,GSE300445,GSE300445,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous melanoma,tumour tissue,MONDO:0005012,cutaneous melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4115,18085,counts,um,1.0,verified,True,H&E,6.520831632739603,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060735,,,train,sda-all,samples/GSE300445/GSM9060735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9064848,GSE300585,GSE300585,Thor: a platform for cell-level investigation of spatial transcriptomics and histology [Heart Failure],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0005252,heart failure,disease,luna,Congestive Heart Failure,Heart failure,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,0.3995974086160109,platform_constant,True,H&E,0.5000080419381966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40764306,,GSM9064848,,,train,hesrt,samples/GSE300585/GSM9064848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9065344,GSE300613,GSE300613,Spatial transcriptomics dataset of primary tumours from MDA-MB-231 xenograft model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Primary tumour,xenograft,MONDO:0005070,neoplasm,disease,luna,,xenograft,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1415,64591,counts,pixel,4.538274221323131,platform_constant,True,H&E,4.538274221323131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40552975,10.1158/2159-8290.cd-24-0684,GSM9065344,,,test,hesrt,samples/GSE300613/GSM9065344,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.74, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9065345,GSE300613,GSE300613,Spatial transcriptomics dataset of primary tumours from MDA-MB-231 xenograft model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Primary tumour,xenograft,MONDO:0005070,neoplasm,disease,luna,,xenograft,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1570,64591,counts,pixel,4.538274221323131,platform_constant,True,H&E,4.538274221323131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40552975,10.1158/2159-8290.cd-24-0684,GSM9065345,,,test,hesrt,samples/GSE300613/GSM9065345,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9065766,GSE300645,GSE300645,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0017094,cerebral cortical dysplasia,disease,luna,focal cortical dysplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4409,37082,counts,pixel,13.97142812769599,platform_constant,True,H&E,13.97142812769599,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065766,,,train,hesrt,samples/GSE300645/GSM9065766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9065767,GSE300645,GSE300645,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0017094,cerebral cortical dysplasia,disease,luna,focal cortical dysplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4971,37082,counts,pixel,12.17678519768559,platform_constant,True,H&E,12.17678519768559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065767,,,train,hesrt,samples/GSE300645/GSM9065767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9065768,GSE300645,GSE300645,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0017094,cerebral cortical dysplasia,disease,luna,focal cortical dysplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4684,37082,counts,pixel,13.946643291943008,platform_constant,True,H&E,13.946643291943008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065768,,,train,hesrt,samples/GSE300645/GSM9065768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9065769,GSE300645,GSE300645,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0017094,cerebral cortical dysplasia,disease,luna,focal cortical dysplasia,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4731,37082,counts,pixel,13.062076056406552,platform_constant,True,H&E,13.062076056406552,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065769,,,train,hesrt,samples/GSE300645/GSM9065769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9066288,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4639,17943,counts,pixel,4.710904832399855,platform_constant,True,H&E,4.710904832399855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066288,,,train,hesrt,samples/GSE300676/GSM9066288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066289,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3981,17943,counts,pixel,4.795744544157061,platform_constant,True,H&E,4.795744544157061,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066289,,,train,hesrt,samples/GSE300676/GSM9066289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066290,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3878,17943,counts,pixel,4.761953291013262,platform_constant,True,H&E,4.761953291013262,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066290,,,train,hesrt,samples/GSE300676/GSM9066290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066291,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3508,17943,counts,pixel,4.7980916883874976,platform_constant,True,H&E,4.7980916883874976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066291,,,train,hesrt,samples/GSE300676/GSM9066291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066292,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4532,17943,counts,pixel,4.6766214002573125,platform_constant,True,H&E,4.6766214002573125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066292,,,train,hesrt,samples/GSE300676/GSM9066292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066293,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4463,17943,counts,pixel,4.724179663161129,platform_constant,True,H&E,4.724179663161129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066293,,,train,hesrt,samples/GSE300676/GSM9066293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066294,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4729,17943,counts,pixel,4.7619845044983125,platform_constant,True,H&E,4.7619845044983125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066294,,,train,hesrt,samples/GSE300676/GSM9066294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066295,GSE300676,GSE300676,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3897,17943,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,FAIL,,,41040912,,GSM9066295,,,train,sda-all,samples/GSE300676/GSM9066295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066380,GSE300692,GSE300692,Thor: a platform for cell-level investigation of spatial transcriptomics and histology [Bladder Cancer],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,400147,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.5913544233599985,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40764306,,GSM9066380,,,train,sda-all,samples/GSE300692/GSM9066380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293137,GSE300851,GSE300851,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,Chronic kidney disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4264,17923,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9293137,,,train,sda-all,samples/GSE300851/GSM9293137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9293138,GSE300851,GSE300851,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,Chronic kidney disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4505,17945,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9293138,,,train,sda-all,samples/GSE300851/GSM9293138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293139,GSE300851,GSE300851,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,luna,Chronic kidney disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4928,17925,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9293139,,,train,sda-all,samples/GSE300851/GSM9293139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293140,GSE300851,GSE300851,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3688,17926,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9293140,,,train,sda-all,samples/GSE300851/GSM9293140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293141,GSE300851,GSE300851,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275,lung disorder,disease,luna,Chronic lung disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4042,17933,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9293141,,,train,sda-all,samples/GSE300851/GSM9293141,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9293142,GSE300851,GSE300851,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005275,lung disorder,disease,luna,Chronic lung disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4505,17962,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9293142,,,train,sda-all,samples/GSE300851/GSM9293142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9071194,GSE300895,GSE300895,High resolution spatial trancrioptomics combined with deep learning-based image segmentation enables single-cell spatial profiling of archival FFPE kidney tissue from patients with idiopathic nephrotic syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0018170,idiopathic nephrotic syndrome,disease,luna,idiopathic nephrotic syndrome,SSNS,not stated,luna,not stated,,unknown,not stated,,GSE300895:Patient1,Patient1,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,865888,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,zero_count_observations,human_visual_review,,,,,,GSM9071194,,,train,hesrt,samples/GSE300895/GSM9071194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9071195,GSE300895,GSE300895,High resolution spatial trancrioptomics combined with deep learning-based image segmentation enables single-cell spatial profiling of archival FFPE kidney tissue from patients with idiopathic nephrotic syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0018170,idiopathic nephrotic syndrome,disease,luna,idiopathic nephrotic syndrome,FSGS,not stated,luna,not stated,,unknown,not stated,,GSE300895:Patient2,Patient2,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,908128,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,zero_count_observations,human_visual_review,,,,,,GSM9071195,,,train,hesrt,samples/GSE300895/GSM9071195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9071196,GSE300895,GSE300895,High resolution spatial trancrioptomics combined with deep learning-based image segmentation enables single-cell spatial profiling of archival FFPE kidney tissue from patients with idiopathic nephrotic syndrome,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0018170,idiopathic nephrotic syndrome,disease,luna,idiopathic nephrotic syndrome,FR/SDNS,not stated,luna,not stated,,unknown,not stated,,GSE300895:Patient3,Patient3,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,1936880,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,zero_count_observations,human_visual_review,,,,,,GSM9071196,,,train,hesrt,samples/GSE300895/GSM9071196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9073648,GSE301012,GSE301012,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,PCB,not stated,luna,not stated,adult,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3231,32285,counts,pixel,0.5459349747184589,platform_constant,True,H&E,0.5459349747184589,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073648,,,train,hesrt,samples/GSE301012/GSM9073648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9073649,GSE301012,GSE301012,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,PCB,adult,luna,adult,adult,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2970,32285,counts,pixel,0.5460486774274447,platform_constant,True,H&E,0.5460486774274447,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073649,,,train,hesrt,samples/GSE301012/GSM9073649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9073650,GSE301012,GSE301012,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Vehicle,not stated,luna,not stated,adult,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2708,32285,counts,pixel,0.5464604950717884,platform_constant,True,H&E,0.5464604950717884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073650,,,train,hesrt,samples/GSE301012/GSM9073650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM9073651,GSE301012,GSE301012,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Vehicle,adult,luna,adult,adult,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3330,32285,counts,pixel,0.5464808872971496,platform_constant,True,H&E,0.5464808872971496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073651,,,train,hesrt,samples/GSE301012/GSM9073651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.49}",disease_status;life_stage,low_confidence_annotation
GSM9078930,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3470,35236,counts,pixel,3.95178852535466,platform_constant,True,H&E,3.95178852535466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078930,,,train,hesrt,samples/GSE301260/GSM9078930,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9078931,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2860,35236,counts,pixel,3.942790878283373,platform_constant,True,H&E,3.942790878283373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078931,,,train,hesrt,samples/GSE301260/GSM9078931,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM9078932,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2889,35236,counts,pixel,3.9409912747590097,platform_constant,True,H&E,3.9409912747590097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078932,,,train,hesrt,samples/GSE301260/GSM9078932,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9078933,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3205,35236,counts,pixel,3.95358805997216,platform_constant,True,H&E,3.95358805997216,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078933,,,train,hesrt,samples/GSE301260/GSM9078933,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9078934,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3405,35236,counts,pixel,3.946389871041147,platform_constant,True,H&E,3.946389871041147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078934,,,train,hesrt,samples/GSE301260/GSM9078934,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9078935,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3184,35236,counts,pixel,3.9517885253546563,platform_constant,True,H&E,3.9517885253546563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078935,,,train,hesrt,samples/GSE301260/GSM9078935,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9078936,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2658,35236,counts,pixel,3.9553875824027167,platform_constant,True,H&E,3.9553875824027167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078936,,,train,hesrt,samples/GSE301260/GSM9078936,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9078937,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3268,35236,counts,pixel,3.951788525354653,platform_constant,True,H&E,3.951788525354653,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078937,,,train,hesrt,samples/GSE301260/GSM9078937,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9078938,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3480,35236,counts,pixel,3.939191718031696,platform_constant,True,H&E,3.939191718031696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078938,,,train,hesrt,samples/GSE301260/GSM9078938,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9078939,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2907,35236,counts,pixel,3.9553875824027167,platform_constant,True,H&E,3.9553875824027167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078939,,,train,hesrt,samples/GSE301260/GSM9078939,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9078940,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3583,35236,counts,pixel,3.942790878283373,platform_constant,True,H&E,3.942790878283373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078940,,,train,hesrt,samples/GSE301260/GSM9078940,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9078941,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,status epilepticus,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2901,35236,counts,pixel,3.9445902670833277,platform_constant,True,H&E,3.9445902670833277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078941,,,train,hesrt,samples/GSE301260/GSM9078941,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9078942,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3027,35236,counts,pixel,3.937392080997424,platform_constant,True,H&E,3.937392080997424,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078942,,,train,hesrt,samples/GSE301260/GSM9078942,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.28}",disease_status;life_stage,low_confidence_annotation
GSM9078943,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3484,35236,counts,pixel,3.9373920809974257,platform_constant,True,H&E,3.9373920809974257,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078943,,,train,hesrt,samples/GSE301260/GSM9078943,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.38}",disease_status;life_stage,low_confidence_annotation
GSM9078944,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3162,35236,counts,pixel,3.942790878283373,platform_constant,True,H&E,3.942790878283373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078944,,,train,hesrt,samples/GSE301260/GSM9078944,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM9078945,GSE301260,GSE301260,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3098,35236,counts,pixel,3.9463898710411485,platform_constant,True,H&E,3.9463898710411485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078945,,,train,hesrt,samples/GSE301260/GSM9078945,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.34}",disease_status;life_stage,low_confidence_annotation
GSM9078977,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,979,17943,counts,pixel,4.17327567468889,platform_constant,True,H&E,4.17327567468889,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078977,,,train,hesrt,samples/GSE301265/GSM9078977,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9078978,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,972,17943,counts,pixel,4.166379339259518,platform_constant,True,H&E,4.166379339259518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078978,,,train,hesrt,samples/GSE301265/GSM9078978,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9078979,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1177,17943,counts,pixel,4.225431196084384,platform_constant,True,H&E,4.225431196084384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078979,,,train,hesrt,samples/GSE301265/GSM9078979,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9078980,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1120,17943,counts,pixel,4.231034301162641,platform_constant,True,H&E,4.231034301162641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078980,,,train,hesrt,samples/GSE301265/GSM9078980,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9078981,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1110,17943,counts,pixel,4.23240916155043,platform_constant,True,H&E,4.23240916155043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078981,,,train,hesrt,samples/GSE301265/GSM9078981,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9078982,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1099,17943,counts,pixel,4.167308539584607,platform_constant,True,H&E,4.167308539584607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078982,,,train,hesrt,samples/GSE301265/GSM9078982,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9078983,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1015,17943,counts,pixel,4.234051662384297,platform_constant,True,H&E,4.234051662384297,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078983,,,train,hesrt,samples/GSE301265/GSM9078983,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9078984,GSE301265,GSE301265,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,Small intestinal neuroendocrine tumor,tumour tissue,MONDO:0019496,neuroendocrine neoplasm,disease,luna,Small intestinal neuroendocrine tumor,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,823,17943,counts,pixel,4.233702579004229,platform_constant,True,H&E,4.233702579004229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078984,,,train,hesrt,samples/GSE301265/GSM9078984,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9079610,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Skin,primary tissue,,,normal,luna,Healthy,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9960,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996721311475406,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079610,,,train,sda-all,samples/GSE301280/GSM9079610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079611,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,24,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6800,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000353107344632,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079611,,,train,sda-all,samples/GSE301280/GSM9079611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079612,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,32,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5914,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999388154674507,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079612,,,train,sda-all,samples/GSE301280/GSM9079612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079613,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Healthy,,adult,age rule: bare number read as years,adult,27,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10079,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997730482146463,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079613,,,train,sda-all,samples/GSE301280/GSM9079613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079614,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Healthy,,adult,age rule: bare number read as years,adult,27,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10662,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000309363398872,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079614,,,train,sda-all,samples/GSE301280/GSM9079614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079615,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Healthy,,adult,age rule: bare number read as years,adult,48,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11535,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999725010312113,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079615,,,train,sda-all,samples/GSE301280/GSM9079615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079616,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,21,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11195,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000389535837297,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079616,,,train,sda-all,samples/GSE301280/GSM9079616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079617,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,21,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22048,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997603068072866,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079617,,,train,sda-all,samples/GSE301280/GSM9079617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9079618,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,21,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19931,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000272851296044,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079618,,,train,sda-all,samples/GSE301280/GSM9079618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079619,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,21,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22670,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000061194516972,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079619,,,train,sda-all,samples/GSE301280/GSM9079619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079620,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Pustule,,adult,age rule: bare number read as years,adult,18,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,42558,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000143466141991,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079620,,,train,sda-all,samples/GSE301280/GSM9079620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM9079621,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,18,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19271,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500001691017316,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079621,,,train,sda-all,samples/GSE301280/GSM9079621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.41000000000000003, ""life_stage"": 0.97}",disease_status;uberon,low_confidence_annotation
GSM9079622,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,18,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17841,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000353107344632,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079622,,,train,sda-all,samples/GSE301280/GSM9079622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079623,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Pustule,,adult,age rule: bare number read as years,adult,19,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20595,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000102171882297,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079623,,,train,sda-all,samples/GSE301280/GSM9079623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM9079624,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,19,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11718,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000285527818567,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079624,,,train,sda-all,samples/GSE301280/GSM9079624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.42, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9079625,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,21,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11937,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996144480519483,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079625,,,train,sda-all,samples/GSE301280/GSM9079625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079626,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,21,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10314,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999565972222222,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079626,,,train,sda-all,samples/GSE301280/GSM9079626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079627,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,21,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11011,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000226523887973,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079627,,,train,sda-all,samples/GSE301280/GSM9079627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9079628,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,21,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7106,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025370407957,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079628,,,train,sda-all,samples/GSE301280/GSM9079628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079629,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Comedo,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10450,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079629,,,train,sda-all,samples/GSE301280/GSM9079629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9079630,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0011438,acne,disease,luna,Pustule,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32861,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000058788947678,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9079630,,,train,sda-all,samples/GSE301280/GSM9079630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079631,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6679,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000114807633432,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079631,,,train,sda-all,samples/GSE301280/GSM9079631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM9079632,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Non-lesional,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7378,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000219891745602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079632,,,train,sda-all,samples/GSE301280/GSM9079632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9079633,GSE301280,GSE301280,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,Healthy,,adult,age rule: bare number read as years,adult,49,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5384,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000226523887973,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079633,,,train,sda-all,samples/GSE301280/GSM9079633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9080376,GSE301306,GSE301306,Spatial transcriptomics of the human first trimester decidua,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,placenta,uberon_chain,UBERON:0000453,decidua basalis,Decidua,primary tissue,,,normal,luna,,invaded,not stated,luna,not stated,,unknown,not stated,,GSE301306:Donor 1,Donor 1,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,871,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.679709024114317,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080376,,,train,sda-all,samples/GSE301306/GSM9080376,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9080377,GSE301306,GSE301306,Spatial transcriptomics of the human first trimester decidua,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,placenta,uberon_chain,UBERON:0006878,decidua parietalis,Decidua,primary tissue,,,normal,luna,,non-invaded,not stated,luna,not stated,,unknown,not stated,,GSE301306:Donor 1,Donor 1,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1482,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.673981267036336,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080377,,,train,sda-all,samples/GSE301306/GSM9080377,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9080378,GSE301306,GSE301306,Spatial transcriptomics of the human first trimester decidua,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,placenta,uberon_chain,UBERON:0000453,decidua basalis,Decidua,primary tissue,,,normal,luna,,invaded,not stated,luna,not stated,,unknown,not stated,,GSE301306:Donor 2,Donor 2,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1800,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.679894868445689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080378,,,train,sda-all,samples/GSE301306/GSM9080378,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9080379,GSE301306,GSE301306,Spatial transcriptomics of the human first trimester decidua,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,placenta,uberon_chain,UBERON:0006878,decidua parietalis,Decidua,primary tissue,,,normal,luna,,non-invaded,not stated,luna,not stated,,unknown,not stated,,GSE301306:Donor 2,Donor 2,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1973,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.673780457051397,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080379,,,train,sda-all,samples/GSE301306/GSM9080379,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9083240,GSE301435,GSE301435,A parabrachial hub for the prioritization of survival behavior during pain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0007634,parabrachial nucleus,Coronal Mouse Brain section ~-5.2mm from Bregma,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,207814,1201,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41062698,,GSM9083240,,,train,sda-all,samples/GSE301435/GSM9083240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9083241,GSE301435,GSE301435,A parabrachial hub for the prioritization of survival behavior during pain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0007634,parabrachial nucleus,Coronal Mouse Brain section ~-5.2mm from Bregma,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,186550,1201,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41062698,,GSM9083241,,,train,sda-all,samples/GSE301435/GSM9083241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9083960,GSE301486,GSE301486,Spatial transcriptomics data of EMP2-progressive symmetric erythrokeratoderma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0019270,erythrokeratoderma,disease,luna,progressive symmetric erythrokeratoderma,PSEK1574 and healthy control on same Visium HD capture area,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,80924,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40758889,,GSM9083960,,,val,hesrt,samples/GSE301486/GSM9083960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.45, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9087494,GSE301696,GSE301696,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,,cell culture,,,normal,luna,,control,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,267200,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9087494,,,train,sda-all,samples/GSE301696/GSM9087494,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9087495,GSE301696,GSE301696,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,cell culture,,,perturbation,luna,,IFNG,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,147961,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9087495,,,train,sda-all,samples/GSE301696/GSM9087495,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9087496,GSE301696,GSE301696,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,,cell culture,,,normal,luna,,control,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,44854,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9087496,,,train,sda-all,samples/GSE301696/GSM9087496,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9087497,GSE301696,GSE301696,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,cell culture,,,perturbation,luna,,IFNG,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,63065,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9087497,,,train,sda-all,samples/GSE301696/GSM9087497,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9087747,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,Oropharynx,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2261,17943,counts,pixel,4.161563199403212,platform_constant,True,H&E,4.161563199403212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087747,,,train,hesrt,samples/GSE301720/GSM9087747,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9087748,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,Oropharynx,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Non-Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2948,17943,counts,pixel,4.137321055875736,platform_constant,True,H&E,4.137321055875736,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087748,,,train,hesrt,samples/GSE301720/GSM9087748,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9087749,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,Oropharynx,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Non-Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2606,17943,counts,pixel,4.494987700961455,platform_constant,True,H&E,4.494987700961455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087749,,,train,hesrt,samples/GSE301720/GSM9087749,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9087750,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,Oropharynx,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Non-Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2511,17943,counts,pixel,4.673302034596775,platform_constant,True,H&E,4.673302034596775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087750,,,train,hesrt,samples/GSE301720/GSM9087750,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9087751,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,luna,UBERON:0001707,nasal cavity,Nasal Cavity,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2945,17943,counts,pixel,4.494987700961454,platform_constant,True,H&E,4.494987700961454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087751,,,train,hesrt,samples/GSE301720/GSM9087751,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9087752,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,Oropharynx,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1642,17943,counts,pixel,4.494987700961464,platform_constant,True,H&E,4.494987700961464,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087752,,,train,hesrt,samples/GSE301720/GSM9087752,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9087753,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,Oropharynx,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1526,17943,counts,pixel,4.494987700961455,platform_constant,True,H&E,4.494987700961455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087753,,,train,hesrt,samples/GSE301720/GSM9087753,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9087754,GSE301720,GSE301720,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Oral Cavity,tumour tissue,MONDO:0021310,malignant tumor of neck,disease,luna,head and neck cancer,Non-Responder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2608,17943,counts,pixel,4.673302034596762,platform_constant,True,H&E,4.673302034596762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087754,,,train,hesrt,samples/GSE301720/GSM9087754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9093278,GSE301973,GSE301973,The spatial transcriptomics of EGFR-mutant non-small cell lung cancer before osimertinib treatment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,EGFR-mutated NSCLC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,45661,18111,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM9093278,,,train,hesrt,samples/GSE301973/GSM9093278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9093279,GSE301973,GSE301973,The spatial transcriptomics of EGFR-mutant non-small cell lung cancer before osimertinib treatment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,EGFR-mutated NSCLC,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,165630,18111,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM9093279,,,train,hesrt,samples/GSE301973/GSM9093279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9096726,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Saline,not stated,luna,not stated,,female,extracted field,Female,GSE302128:731,731,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,86655,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051482701812,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096726,,,test,sda-all,samples/GSE302128/GSM9096726,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9096727,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Saline,not stated,luna,not stated,,female,extracted field,Female,GSE302128:733,733,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,42733,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034307671195,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096727,,,test,sda-all,samples/GSE302128/GSM9096727,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.74, ""disease_status"": 0.96, ""uberon"": 0.9, ""life_stage"": 1.0}",,feature_species_differs
GSM9096728,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Saline,not stated,luna,not stated,,female,extracted field,Female,GSE302128:736,736,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37590,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999882214369847,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096728,,,test,sda-all,samples/GSE302128/GSM9096728,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.76, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9096729,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Saline,not stated,luna,not stated,,female,extracted field,Female,GSE302128:738,738,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,142943,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000060907274765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096729,,,test,sda-all,samples/GSE302128/GSM9096729,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.67, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,feature_species_differs
GSM9096730,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Gedatolisib,not stated,luna,not stated,,female,extracted field,Female,GSE302128:732,732,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54469,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999873806901616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096730,,,test,sda-all,samples/GSE302128/GSM9096730,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.81, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9096731,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Gedatolisib,not stated,luna,not stated,,female,extracted field,Female,GSE302128:734,734,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52889,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999873806901616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096731,,,test,sda-all,samples/GSE302128/GSM9096731,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.63, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9096732,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Gedatolisib,not stated,luna,not stated,,female,extracted field,Female,GSE302128:735,735,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50212,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998323878287776,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096732,,,test,sda-all,samples/GSE302128/GSM9096732,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9096733,GSE302128,GSE302128,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,oral cavity,luna,UBERON:0001723,tongue,tongue,tumour tissue,MONDO:0021351,neoplasm of neck,disease,luna,,Gedatolisib,not stated,luna,not stated,,female,extracted field,Female,GSE302128:737,737,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75178,9880,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000325922876355,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096733,,,test,sda-all,samples/GSE302128/GSM9096733,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9097318,GSE302160,GSE302160,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001384,primary motor cortex,brain:primary motor cortex,primary tissue,MONDO:0010997;MONDO:0006496,"supranuclear palsy, progressive, 1;palsy",disease,luna,PSP (low seeder),low seeder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4763,18085,counts,pixel,3.037184984800885,platform_constant,True,H&E,3.037184984800885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41476155,,GSM9097318,,,val,hesrt,samples/GSE302160/GSM9097318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9097319,GSE302160,GSE302160,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001384,primary motor cortex,brain:primary motor cortex,primary tissue,MONDO:0010997;MONDO:0006496,"supranuclear palsy, progressive, 1;palsy",disease,luna,PSP (low seeder),,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3837,18085,counts,um,1.0,verified,True,fluorescence: blue (heuristic),4.545880211325501,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41476155,,GSM9097319,,,val,sda-all,samples/GSE302160/GSM9097319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9097320,GSE302160,GSE302160,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001384,primary motor cortex,brain:primary motor cortex,primary tissue,MONDO:0010997;MONDO:0006496,"supranuclear palsy, progressive, 1;palsy",disease,luna,PSP (high seeder),high seeder,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4690,18085,counts,pixel,3.03578646514248,platform_constant,True,H&E,3.03578646514248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41476155,,GSM9097320,,,val,hesrt,samples/GSE302160/GSM9097320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9097321,GSE302160,GSE302160,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001384,primary motor cortex,brain:primary motor cortex,primary tissue,MONDO:0010997;MONDO:0006496,"supranuclear palsy, progressive, 1;palsy",disease,luna,PSP (high seeder),,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3508,18085,counts,um,1.0,verified,True,fluorescence: blue (heuristic),5.450765988787993,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41476155,,GSM9097321,,,val,sda-all,samples/GSE302160/GSM9097321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9098123,GSE302187,GSE302187,Murine model of MRSA-induced kidney injury (spatial transcriptomics),Mus musculus,10090,house mouse,Mus musculus,10090,Staphylococcus aureus,False,False,GEO organism field,"Staphylococcus aureus
Mus musculus",,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0006939,pyelonephritis,disease,luna,,MRSA_day2_and_day4,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5223,19812,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,,,GSM9098123,,,train,sda-all,samples/GSE302187/GSM9098123,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9098124,GSE302187,GSE302187,Murine model of MRSA-induced kidney injury (spatial transcriptomics),Mus musculus,10090,house mouse,Mus musculus,10090,Staphylococcus aureus,False,False,GEO organism field,"Staphylococcus aureus
Mus musculus",,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0006939,pyelonephritis,disease,luna,,MRSA_day2_and_day4,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5338,19812,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,,,GSM9098124,,,train,sda-all,samples/GSE302187/GSM9098124,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9100631,GSE302264,GSE302264,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,scrambled,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,166847,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000055202870549,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100631,,,train,sda-all,samples/GSE302264/GSM9100631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9100632,GSE302264,GSE302264,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,siRNA,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,90617,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49995886804870016,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100632,,,train,sda-all,samples/GSE302264/GSM9100632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9100633,GSE302264,GSE302264,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,day 19,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11229,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000287923659098,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100633,,,train,sda-all,samples/GSE302264/GSM9100633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9100634,GSE302264,GSE302264,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,day 25,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,106751,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000143266475644,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100634,,,train,sda-all,samples/GSE302264/GSM9100634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9226654,GSE302356,GSE302356,Decoding Lymphangioleiomyomatosis (LAM) Niche Environment via Integrative Analysis of Single Cell Multiomics and Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,268206,18085,counts,um,1.0,verified,True,H&E,2.5183210102795384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9226654,,,test,sda-all,samples/GSE302356/GSM9226654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226655,GSE302356,GSE302356,Decoding Lymphangioleiomyomatosis (LAM) Niche Environment via Integrative Analysis of Single Cell Multiomics and Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,173579,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999808605114077,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9226655,,,test,sda-all,samples/GSE302356/GSM9226655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226656,GSE302356,GSE302356,Decoding Lymphangioleiomyomatosis (LAM) Niche Environment via Integrative Analysis of Single Cell Multiomics and Spatial Transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0011705,lymphangioleiomyomatosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2311,18085,counts,um,1.0,verified,True,H&E,9.636023739276627,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9226656,,,test,sda-all,samples/GSE302356/GSM9226656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9104197,GSE302449,GSE302449,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,adult,11 weeks old,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3962,19465,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.243176547838095,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104197,,,test,sda-all,samples/GSE302449/GSM9104197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9104198,GSE302449,GSE302449,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,adult,age rule: age with unit,adult,11 weeks old,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3343,19465,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.240801371385965,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104198,,,test,sda-all,samples/GSE302449/GSM9104198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9104199,GSE302449,GSE302449,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,rNLS8,adult,age rule: age with unit,adult,11 weeks old,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3033,19465,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.245788498644368,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104199,,,test,sda-all,samples/GSE302449/GSM9104199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9104200,GSE302449,GSE302449,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,rNLS8,adult,age rule: age with unit,adult,11 weeks old,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2656,19465,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.242327988565199,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104200,,,test,sda-all,samples/GSE302449/GSM9104200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9104597,GSE302470,GSE302470,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium embryo],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,uberon_chain,UBERON:0002097,skin of body,,whole embryo/organism,,,normal,luna,,Krt14Cre -; Lsd1 fl/fl,embryonic,luna,embryonic,embryo,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.3.0.1,cell,286053,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999673216853296,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104597,,,train,sda-all,samples/GSE302470/GSM9104597,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 0.96, ""disease_status"": 0.44, ""uberon"": 0.31, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9104598,GSE302470,GSE302470,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium embryo],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,,whole embryo/organism,,,perturbation,luna,,Krt14Cre +; Lsd1 fl/fl,embryonic,luna,embryonic,embryo,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.3.0.1,cell,386062,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961880282304,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104598,,,train,sda-all,samples/GSE302470/GSM9104598,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 0.93, ""disease_status"": 0.92, ""uberon"": 0.37, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9104735,GSE302473,GSE302473,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium tumor],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,Squamous cell carcinoma,DMSO,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,277947,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999448397595014,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104735,,,train,sda-all,samples/GSE302473/GSM9104735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9104736,GSE302473,GSE302473,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium tumor],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0002529,skin squamous cell carcinoma,disease,luna,Squamous cell carcinoma,LSD1i,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,149237,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999972427484283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104736,,,train,sda-all,samples/GSE302473/GSM9104736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9104737,GSE302474,GSE302474,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium CreERT],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,Whole dorsal skin,primary tissue,,,perturbation,luna,,Corn Oil,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,37990,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500001379995584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104737,,,train,sda-all,samples/GSE302474/GSM9104737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9104738,GSE302474,GSE302474,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium CreERT],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Whole dorsal skin,primary tissue,MONDO:0005093,skin disorder,disease,mondo_predicate (Luna: perturbation),,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,95388,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999862220997515,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104738,,,train,sda-all,samples/GSE302474/GSM9104738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9105216,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:377,377,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12085,534,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117861983617,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105216,,,train,sda-all,samples/GSE302502/GSM9105216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105217,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:210,210,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15316,508,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034522439586,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105217,,,train,sda-all,samples/GSE302502/GSM9105217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105218,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:569,569,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17561,535,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000038076588338,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105218,,,train,sda-all,samples/GSE302502/GSM9105218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105219,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:351,351,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1757,472,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103092783506,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105219,,,train,sda-all,samples/GSE302502/GSM9105219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105220,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:496,496,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4394,499,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999845450049456,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105220,,,train,sda-all,samples/GSE302502/GSM9105220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105221,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:567,567,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10532,503,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999911686782455,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105221,,,train,sda-all,samples/GSE302502/GSM9105221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105222,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:157,157,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,3532,489,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999088212410037,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105222,,,train,sda-all,samples/GSE302502/GSM9105222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105223,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:548,548,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1196,474,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999939190503984,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105223,,,train,sda-all,samples/GSE302502/GSM9105223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105224,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:484,484,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1291,480,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000032331488283,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105224,,,train,sda-all,samples/GSE302502/GSM9105224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105225,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:565,565,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,419,471,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999974193548387,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105225,,,train,sda-all,samples/GSE302502/GSM9105225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105226,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:511,511,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4736,504,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054996425233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105226,,,train,sda-all,samples/GSE302502/GSM9105226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105227,GSE302502,GSE302502,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0021042,glioma,disease,luna,Glioma,,not stated,luna,not stated,,unknown,not stated,,GSE302502:80,80,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2011,482,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000090020576132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105227,,,train,sda-all,samples/GSE302502/GSM9105227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9106293,GSE302569,GSE302569,Elucidating the fibrotic niche and cellular dynamics in crohn’s disease-associated fibrostenosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,strictured fibrotic ileum,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,520101,18085,counts,pixel,17.479390571293557,platform_constant,True,H&E,17.479390571293557,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41344440,,GSM9106293,,,train,hesrt,samples/GSE302569/GSM9106293,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9106294,GSE302569,GSE302569,Elucidating the fibrotic niche and cellular dynamics in crohn’s disease-associated fibrostenosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,non-strictured non-fibrotic ileum,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,468841,18085,counts,pixel,16.66961830152686,platform_constant,True,H&E,16.66961830152686,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41344440,,GSM9106294,,,train,hesrt,samples/GSE302569/GSM9106294,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9107838,GSE302642,GSE302642,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH-mutant glioma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,"Oligodendroglioma, IDH-mutant, 1p/19q-codel",,adult,age rule: age in years,adult,48 years,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29655,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41505555,,GSM9107838,,,train,sda-all,samples/GSE302642/GSM9107838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9107839,GSE302642,GSE302642,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH-mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,adult,age rule: age in years,adult,61 years,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45749,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41505555,,GSM9107839,,,train,sda-all,samples/GSE302642/GSM9107839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9107840,GSE302642,GSE302642,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Patient-derived peritumoral tissue,primary tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,mondo_predicate,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,adult,age rule: age in years,adult,29 years,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21799,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41505555,,GSM9107840,,,train,sda-all,samples/GSE302642/GSM9107840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9107841,GSE302642,GSE302642,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Patient-derived peritumoral tissue,primary tissue,,,normal,luna,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,adult,age rule: age in years,adult,42 years,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23123,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41505555,,GSM9107841,,,train,sda-all,samples/GSE302642/GSM9107841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM9107842,GSE302642,GSE302642,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Patient-derived peritumoral tissue,primary tissue,,,disease,luna,"Oligodendroglioma, IDH-mutant, 1p/19q-codel",,adult,age rule: age in years,adult,48 years,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4411,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41505555,,GSM9107842,,,train,sda-all,samples/GSE302642/GSM9107842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9107843,GSE302642,GSE302642,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Patient-derived peritumoral tissue,primary tissue,MONDO:0021636,astrocytic tumor,disease,mondo_predicate,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,adult,age rule: age in years,adult,61 years,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9615,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41505555,,GSM9107843,,,train,sda-all,samples/GSE302642/GSM9107843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9108683,GSE302677,GSE302677,Spatial transcriptomics reveals injury-responsive compartments and coordinated immune–fibrotic signaling  in ANCA-associated renal vasculitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,kidney cortex_control,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1413,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.4180614253049875,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42602048,,GSM9108683,,,train,sda-all,samples/GSE302677/GSM9108683,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9108684,GSE302677,GSE302677,Spatial transcriptomics reveals injury-responsive compartments and coordinated immune–fibrotic signaling  in ANCA-associated renal vasculitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,kidney cortex_mild AAV,primary tissue,MONDO:0015492,anti-neutrophil cytoplasmic antibody-associated vasculitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,892,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.041496270119149,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42602048,,GSM9108684,,,train,sda-all,samples/GSE302677/GSM9108684,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9108685,GSE302677,GSE302677,Spatial transcriptomics reveals injury-responsive compartments and coordinated immune–fibrotic signaling  in ANCA-associated renal vasculitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001225,cortex of kidney,kidney cortex_severe AAV,primary tissue,MONDO:0015492,anti-neutrophil cytoplasmic antibody-associated vasculitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1277,36601,counts,um,1.0,verified,True,H&E-like (heuristic),3.93296089418714,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42602048,,GSM9108685,,,train,sda-all,samples/GSE302677/GSM9108685,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9111711,GSE302815,GSE302815,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2082,32285,counts,pixel,4.300638244931022,platform_constant,True,H&E,4.300638244931022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111711,,,train,hesrt,samples/GSE302815/GSM9111711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9111712,GSE302815,GSE302815,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2895,32285,counts,pixel,4.299874657332631,platform_constant,True,H&E,4.299874657332631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111712,,,train,hesrt,samples/GSE302815/GSM9111712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9111713,GSE302815,GSE302815,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2804,32285,counts,pixel,4.2991115829653195,platform_constant,True,H&E,4.2991115829653195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111713,,,train,hesrt,samples/GSE302815/GSM9111713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9111714,GSE302815,GSE302815,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3073,32285,counts,pixel,4.298729784212042,platform_constant,True,H&E,4.298729784212042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111714,,,train,hesrt,samples/GSE302815/GSM9111714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9116169,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,950,36601,counts,um,1.0,verified,True,H&E,4.524229088305471,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116169,,,train,sda-all,samples/GSE303036/GSM9116169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116170,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1036,36601,counts,um,1.0,verified,True,H&E,4.50663821541671,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116170,,,train,sda-all,samples/GSE303036/GSM9116170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116171,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1575,36601,counts,um,1.0,verified,True,H&E,4.569285892976008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116171,,,train,sda-all,samples/GSE303036/GSM9116171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116172,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1065,36601,counts,um,1.0,verified,True,H&E,4.570839681022168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116172,,,train,sda-all,samples/GSE303036/GSM9116172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116173,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1226,36601,counts,um,1.0,verified,True,H&E,4.5645024192018155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116173,,,train,sda-all,samples/GSE303036/GSM9116173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116174,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1291,36601,counts,um,1.0,verified,True,H&E,4.571432165775176,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116174,,,train,sda-all,samples/GSE303036/GSM9116174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116175,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1646,36601,counts,um,1.0,verified,True,H&E,4.56942597974196,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116175,,,train,sda-all,samples/GSE303036/GSM9116175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116176,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,,,normal,luna,non-affected,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1505,36601,counts,um,1.0,verified,True,H&E,4.5710234903688285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116176,,,train,sda-all,samples/GSE303036/GSM9116176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116177,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,,,normal,luna,non-affected,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2357,36601,counts,um,1.0,verified,True,H&E,4.573307138726922,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116177,,,train,sda-all,samples/GSE303036/GSM9116177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116178,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,,,normal,luna,non-affected,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1727,36601,counts,um,1.0,verified,True,H&E,4.573982390167501,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116178,,,train,sda-all,samples/GSE303036/GSM9116178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116179,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,,,normal,luna,non-affected,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1886,36601,counts,um,1.0,verified,True,H&E,4.568480816856961,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116179,,,train,sda-all,samples/GSE303036/GSM9116179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116180,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,,,normal,luna,non-affected,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1556,36601,counts,um,1.0,verified,True,H&E,4.571516938708509,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116180,,,train,sda-all,samples/GSE303036/GSM9116180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116181,GSE303036,GSE303036,Eye-conic' spatial transcriptomics of keratoconus corneas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,eye,luna,UBERON:0000964,cornea,Cornea,primary tissue,MONDO:0015486,keratoconus,disease,luna,Keratoconus,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1368,36601,counts,um,1.0,verified,True,H&E,4.572047323306235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116181,,,train,sda-all,samples/GSE303036/GSM9116181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116888,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1534,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116888,,,val,sda-all,samples/GSE303070/GSM9116888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9116889,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2357,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116889,,,val,sda-all,samples/GSE303070/GSM9116889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9116890,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2191,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116890,,,val,sda-all,samples/GSE303070/GSM9116890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116891,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1864,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116891,,,val,sda-all,samples/GSE303070/GSM9116891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9116892,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3204,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116892,,,val,sda-all,samples/GSE303070/GSM9116892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.44, ""uberon"": 0.61, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9116893,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2409,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116893,,,val,sda-all,samples/GSE303070/GSM9116893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9116894,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1958,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116894,,,val,sda-all,samples/GSE303070/GSM9116894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9116895,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2431,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116895,,,val,sda-all,samples/GSE303070/GSM9116895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116896,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3823,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116896,,,val,sda-all,samples/GSE303070/GSM9116896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 0.88}",,
GSM9116897,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1656,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116897,,,val,sda-all,samples/GSE303070/GSM9116897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9116898,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1660,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116898,,,val,sda-all,samples/GSE303070/GSM9116898,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116899,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2197,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116899,,,val,sda-all,samples/GSE303070/GSM9116899,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9116900,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2299,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116900,,,val,sda-all,samples/GSE303070/GSM9116900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116901,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3371,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116901,,,val,sda-all,samples/GSE303070/GSM9116901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.52, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9116902,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2010,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116902,,,val,sda-all,samples/GSE303070/GSM9116902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116903,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1018,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116903,,,val,sda-all,samples/GSE303070/GSM9116903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9116904,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2929,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116904,,,val,sda-all,samples/GSE303070/GSM9116904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116905,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3458,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116905,,,val,sda-all,samples/GSE303070/GSM9116905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116906,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1759,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116906,,,val,sda-all,samples/GSE303070/GSM9116906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM9116907,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1796,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116907,,,val,sda-all,samples/GSE303070/GSM9116907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116908,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2613,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116908,,,val,sda-all,samples/GSE303070/GSM9116908,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9116909,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2103,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116909,,,val,sda-all,samples/GSE303070/GSM9116909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9116910,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3643,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116910,,,val,sda-all,samples/GSE303070/GSM9116910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.43, ""disease_status"": 0.37, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9116911,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1914,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116911,,,val,sda-all,samples/GSE303070/GSM9116911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9116912,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1645,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116912,,,val,sda-all,samples/GSE303070/GSM9116912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9116913,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2964,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116913,,,val,sda-all,samples/GSE303070/GSM9116913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116914,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3787,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116914,,,val,sda-all,samples/GSE303070/GSM9116914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116915,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1838,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116915,,,val,sda-all,samples/GSE303070/GSM9116915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9116916,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1997,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116916,,,val,sda-all,samples/GSE303070/GSM9116916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116917,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2057,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116917,,,val,sda-all,samples/GSE303070/GSM9116917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9116918,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2367,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116918,,,val,sda-all,samples/GSE303070/GSM9116918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116919,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,mondo_predicate,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3026,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116919,,,val,sda-all,samples/GSE303070/GSM9116919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.29, ""uberon"": 0.76, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9116920,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2193,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116920,,,val,sda-all,samples/GSE303070/GSM9116920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116921,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1517,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116921,,,val,sda-all,samples/GSE303070/GSM9116921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM9116922,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2336,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116922,,,val,sda-all,samples/GSE303070/GSM9116922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116923,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3609,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116923,,,val,sda-all,samples/GSE303070/GSM9116923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116924,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2388,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116924,,,val,sda-all,samples/GSE303070/GSM9116924,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9116925,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1730,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116925,,,val,sda-all,samples/GSE303070/GSM9116925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116926,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2482,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116926,,,val,sda-all,samples/GSE303070/GSM9116926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116927,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1913,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116927,,,val,sda-all,samples/GSE303070/GSM9116927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116928,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4580,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116928,,,val,sda-all,samples/GSE303070/GSM9116928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.39, ""uberon"": 0.64, ""life_stage"": 0.77}",sample_kind;disease_status,low_confidence_annotation
GSM9116929,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1940,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116929,,,val,sda-all,samples/GSE303070/GSM9116929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9116930,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1472,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116930,,,val,sda-all,samples/GSE303070/GSM9116930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9116931,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3108,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116931,,,val,sda-all,samples/GSE303070/GSM9116931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116932,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2424,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116932,,,val,sda-all,samples/GSE303070/GSM9116932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9116933,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2201,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116933,,,val,sda-all,samples/GSE303070/GSM9116933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116934,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1362,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116934,,,val,sda-all,samples/GSE303070/GSM9116934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116935,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2102,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116935,,,val,sda-all,samples/GSE303070/GSM9116935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116936,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2071,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116936,,,val,sda-all,samples/GSE303070/GSM9116936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9116937,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4556,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116937,,,val,sda-all,samples/GSE303070/GSM9116937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.75, ""uberon"": 0.6900000000000001, ""life_stage"": 0.6000000000000001}",sample_kind,low_confidence_annotation
GSM9116938,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1383,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116938,,,val,sda-all,samples/GSE303070/GSM9116938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9116939,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1676,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116939,,,val,sda-all,samples/GSE303070/GSM9116939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116940,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2282,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116940,,,val,sda-all,samples/GSE303070/GSM9116940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9116941,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3370,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116941,,,val,sda-all,samples/GSE303070/GSM9116941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116942,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2516,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116942,,,val,sda-all,samples/GSE303070/GSM9116942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116943,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2253,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116943,,,val,sda-all,samples/GSE303070/GSM9116943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116944,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2575,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116944,,,val,sda-all,samples/GSE303070/GSM9116944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116945,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2143,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116945,,,val,sda-all,samples/GSE303070/GSM9116945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9116946,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4752,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116946,,,val,sda-all,samples/GSE303070/GSM9116946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.31, ""uberon"": 0.6900000000000001, ""life_stage"": 0.5}",sample_kind;disease_status;life_stage,low_confidence_annotation
GSM9116947,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1466,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116947,,,val,sda-all,samples/GSE303070/GSM9116947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9116948,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1761,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116948,,,val,sda-all,samples/GSE303070/GSM9116948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9116949,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2053,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116949,,,val,sda-all,samples/GSE303070/GSM9116949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9116950,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2957,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116950,,,val,sda-all,samples/GSE303070/GSM9116950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9116951,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2161,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116951,,,val,sda-all,samples/GSE303070/GSM9116951,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116952,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1951,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116952,,,val,sda-all,samples/GSE303070/GSM9116952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116953,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2307,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116953,,,val,sda-all,samples/GSE303070/GSM9116953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116954,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4947,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116954,,,val,sda-all,samples/GSE303070/GSM9116954,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116955,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4310,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116955,,,val,sda-all,samples/GSE303070/GSM9116955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.77, ""uberon"": 0.6900000000000001, ""life_stage"": 0.98}",sample_kind,low_confidence_annotation
GSM9116956,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1374,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116956,,,val,sda-all,samples/GSE303070/GSM9116956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9116957,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2136,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116957,,,val,sda-all,samples/GSE303070/GSM9116957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 0.99}",,
GSM9116958,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1915,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116958,,,val,sda-all,samples/GSE303070/GSM9116958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116959,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3160,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116959,,,val,sda-all,samples/GSE303070/GSM9116959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116960,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2431,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116960,,,val,sda-all,samples/GSE303070/GSM9116960,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116961,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1800,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116961,,,val,sda-all,samples/GSE303070/GSM9116961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116962,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2731,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116962,,,val,sda-all,samples/GSE303070/GSM9116962,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9116963,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6102,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116963,,,val,sda-all,samples/GSE303070/GSM9116963,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116964,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4364,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116964,,,val,sda-all,samples/GSE303070/GSM9116964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.5700000000000001, ""uberon"": 0.64, ""life_stage"": 0.5}",disease_status;life_stage,low_confidence_annotation
GSM9116965,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1328,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116965,,,val,sda-all,samples/GSE303070/GSM9116965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM9116966,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1722,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116966,,,val,sda-all,samples/GSE303070/GSM9116966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116967,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1616,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116967,,,val,sda-all,samples/GSE303070/GSM9116967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9116968,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2797,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116968,,,val,sda-all,samples/GSE303070/GSM9116968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116969,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2614,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116969,,,val,sda-all,samples/GSE303070/GSM9116969,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9116970,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1816,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116970,,,val,sda-all,samples/GSE303070/GSM9116970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116971,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2246,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116971,,,val,sda-all,samples/GSE303070/GSM9116971,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116972,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4843,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116972,,,val,sda-all,samples/GSE303070/GSM9116972,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116973,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5285,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116973,,,val,sda-all,samples/GSE303070/GSM9116973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.79, ""uberon"": 0.72, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9116974,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1502,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116974,,,val,sda-all,samples/GSE303070/GSM9116974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 0.98}",,
GSM9116975,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1644,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116975,,,val,sda-all,samples/GSE303070/GSM9116975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9116976,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1636,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116976,,,val,sda-all,samples/GSE303070/GSM9116976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116977,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2440,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116977,,,val,sda-all,samples/GSE303070/GSM9116977,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9116978,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2102,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116978,,,val,sda-all,samples/GSE303070/GSM9116978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116979,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2622,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116979,,,val,sda-all,samples/GSE303070/GSM9116979,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116980,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2873,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116980,,,val,sda-all,samples/GSE303070/GSM9116980,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9116981,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3833,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116981,,,val,sda-all,samples/GSE303070/GSM9116981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9116982,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1404,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116982,,,val,sda-all,samples/GSE303070/GSM9116982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116983,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1894,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116983,,,val,sda-all,samples/GSE303070/GSM9116983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9116984,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1338,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116984,,,val,sda-all,samples/GSE303070/GSM9116984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116985,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2590,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116985,,,val,sda-all,samples/GSE303070/GSM9116985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116986,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1466,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116986,,,val,sda-all,samples/GSE303070/GSM9116986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9116987,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2689,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116987,,,val,sda-all,samples/GSE303070/GSM9116987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9116988,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2672,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116988,,,val,sda-all,samples/GSE303070/GSM9116988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116989,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2270,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116989,,,val,sda-all,samples/GSE303070/GSM9116989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9116990,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,mondo_predicate,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3266,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116990,,,val,sda-all,samples/GSE303070/GSM9116990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.28, ""uberon"": 0.61, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9116991,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2214,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116991,,,val,sda-all,samples/GSE303070/GSM9116991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116992,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2442,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116992,,,val,sda-all,samples/GSE303070/GSM9116992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9116993,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2735,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116993,,,val,sda-all,samples/GSE303070/GSM9116993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116994,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2982,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116994,,,val,sda-all,samples/GSE303070/GSM9116994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 0.98}",,
GSM9116995,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2038,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116995,,,val,sda-all,samples/GSE303070/GSM9116995,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116996,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1900,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116996,,,val,sda-all,samples/GSE303070/GSM9116996,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116997,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2379,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116997,,,val,sda-all,samples/GSE303070/GSM9116997,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116998,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4707,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116998,,,val,sda-all,samples/GSE303070/GSM9116998,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116999,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4157,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9116999,,,val,sda-all,samples/GSE303070/GSM9116999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.48, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117000,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1854,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117000,,,val,sda-all,samples/GSE303070/GSM9117000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9117001,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1873,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117001,,,val,sda-all,samples/GSE303070/GSM9117001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117002,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1872,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117002,,,val,sda-all,samples/GSE303070/GSM9117002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9117003,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2190,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117003,,,val,sda-all,samples/GSE303070/GSM9117003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9117004,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2395,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117004,,,val,sda-all,samples/GSE303070/GSM9117004,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117005,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1790,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117005,,,val,sda-all,samples/GSE303070/GSM9117005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117006,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2477,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117006,,,val,sda-all,samples/GSE303070/GSM9117006,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117007,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3459,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117007,,,val,sda-all,samples/GSE303070/GSM9117007,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117008,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4166,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117008,,,val,sda-all,samples/GSE303070/GSM9117008,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.49, ""disease_status"": 0.59, ""uberon"": 0.92, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117009,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1718,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117009,,,val,sda-all,samples/GSE303070/GSM9117009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117010,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1563,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117010,,,val,sda-all,samples/GSE303070/GSM9117010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117011,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1636,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117011,,,val,sda-all,samples/GSE303070/GSM9117011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117012,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2583,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117012,,,val,sda-all,samples/GSE303070/GSM9117012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117013,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1857,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117013,,,val,sda-all,samples/GSE303070/GSM9117013,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9117014,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2171,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117014,,,val,sda-all,samples/GSE303070/GSM9117014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117015,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2162,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117015,,,val,sda-all,samples/GSE303070/GSM9117015,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117016,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3003,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117016,,,val,sda-all,samples/GSE303070/GSM9117016,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117017,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",primary tissue,MONDO:0003409;MONDO:0005814,colonic disorder;intestinal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4539,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117017,,,val,sda-all,samples/GSE303070/GSM9117017,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.43, ""disease_status"": 0.36, ""uberon"": 0.8, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117018,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1442,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117018,,,val,sda-all,samples/GSE303070/GSM9117018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117019,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1920,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117019,,,val,sda-all,samples/GSE303070/GSM9117019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 0.6000000000000001}",,
GSM9117020,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2218,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117020,,,val,sda-all,samples/GSE303070/GSM9117020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9117021,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3140,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117021,,,val,sda-all,samples/GSE303070/GSM9117021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117022,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1998,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117022,,,val,sda-all,samples/GSE303070/GSM9117022,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117023,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2033,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117023,,,val,sda-all,samples/GSE303070/GSM9117023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117024,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2233,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117024,,,val,sda-all,samples/GSE303070/GSM9117024,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117025,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3156,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117025,,,val,sda-all,samples/GSE303070/GSM9117025,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117026,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4448,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117026,,,val,sda-all,samples/GSE303070/GSM9117026,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.72, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117027,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1415,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117027,,,val,sda-all,samples/GSE303070/GSM9117027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117028,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1696,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117028,,,val,sda-all,samples/GSE303070/GSM9117028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9117029,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2426,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117029,,,val,sda-all,samples/GSE303070/GSM9117029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117030,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2256,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117030,,,val,sda-all,samples/GSE303070/GSM9117030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117031,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1628,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117031,,,val,sda-all,samples/GSE303070/GSM9117031,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117032,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2428,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117032,,,val,sda-all,samples/GSE303070/GSM9117032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117033,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2176,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117033,,,val,sda-all,samples/GSE303070/GSM9117033,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117034,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2771,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117034,,,val,sda-all,samples/GSE303070/GSM9117034,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117035,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5038,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117035,,,val,sda-all,samples/GSE303070/GSM9117035,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.54, ""disease_status"": 0.76, ""uberon"": 0.76, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117036,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1689,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117036,,,val,sda-all,samples/GSE303070/GSM9117036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117037,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1684,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117037,,,val,sda-all,samples/GSE303070/GSM9117037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.89}",,
GSM9117038,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2441,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117038,,,val,sda-all,samples/GSE303070/GSM9117038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9117039,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2254,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117039,,,val,sda-all,samples/GSE303070/GSM9117039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117040,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1650,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117040,,,val,sda-all,samples/GSE303070/GSM9117040,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117041,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1349,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117041,,,val,sda-all,samples/GSE303070/GSM9117041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117042,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2151,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117042,,,val,sda-all,samples/GSE303070/GSM9117042,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117043,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2088,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117043,,,val,sda-all,samples/GSE303070/GSM9117043,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9117044,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4226,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117044,,,val,sda-all,samples/GSE303070/GSM9117044,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.65, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117045,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1601,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117045,,,val,sda-all,samples/GSE303070/GSM9117045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117046,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1753,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117046,,,val,sda-all,samples/GSE303070/GSM9117046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 0.63}",,
GSM9117047,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2089,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117047,,,val,sda-all,samples/GSE303070/GSM9117047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117048,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2501,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117048,,,val,sda-all,samples/GSE303070/GSM9117048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117049,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2482,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117049,,,val,sda-all,samples/GSE303070/GSM9117049,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9117050,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,548,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117050,,,val,sda-all,samples/GSE303070/GSM9117050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117051,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1925,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117051,,,val,sda-all,samples/GSE303070/GSM9117051,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117052,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1659,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117052,,,val,sda-all,samples/GSE303070/GSM9117052,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.97}",,
GSM9117053,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",primary tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5496,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117053,,,val,sda-all,samples/GSE303070/GSM9117053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.52, ""uberon"": 0.93, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117054,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1792,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117054,,,val,sda-all,samples/GSE303070/GSM9117054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9117055,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1694,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117055,,,val,sda-all,samples/GSE303070/GSM9117055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.72, ""life_stage"": 0.91}",,
GSM9117056,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2220,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117056,,,val,sda-all,samples/GSE303070/GSM9117056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117057,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2620,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117057,,,val,sda-all,samples/GSE303070/GSM9117057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117058,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2468,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117058,,,val,sda-all,samples/GSE303070/GSM9117058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117059,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,617,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117059,,,val,sda-all,samples/GSE303070/GSM9117059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117060,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2479,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117060,,,val,sda-all,samples/GSE303070/GSM9117060,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117061,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2772,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117061,,,val,sda-all,samples/GSE303070/GSM9117061,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117062,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3798,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117062,,,val,sda-all,samples/GSE303070/GSM9117062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.59, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9117063,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1646,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117063,,,val,sda-all,samples/GSE303070/GSM9117063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117064,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1546,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117064,,,val,sda-all,samples/GSE303070/GSM9117064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.78}",,
GSM9117065,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2494,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117065,,,val,sda-all,samples/GSE303070/GSM9117065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117066,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2652,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117066,,,val,sda-all,samples/GSE303070/GSM9117066,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117067,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2412,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117067,,,val,sda-all,samples/GSE303070/GSM9117067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117068,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,514,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117068,,,val,sda-all,samples/GSE303070/GSM9117068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117069,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2487,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117069,,,val,sda-all,samples/GSE303070/GSM9117069,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117070,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1293,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117070,,,val,sda-all,samples/GSE303070/GSM9117070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117071,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3681,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117071,,,val,sda-all,samples/GSE303070/GSM9117071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.5700000000000001, ""uberon"": 0.68, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117072,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1515,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117072,,,val,sda-all,samples/GSE303070/GSM9117072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9117073,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1757,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117073,,,val,sda-all,samples/GSE303070/GSM9117073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9117074,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2879,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117074,,,val,sda-all,samples/GSE303070/GSM9117074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117075,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2007,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117075,,,val,sda-all,samples/GSE303070/GSM9117075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117076,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,646,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117076,,,val,sda-all,samples/GSE303070/GSM9117076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117077,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2397,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117077,,,val,sda-all,samples/GSE303070/GSM9117077,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117078,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2217,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117078,,,val,sda-all,samples/GSE303070/GSM9117078,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117079,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3421,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117079,,,val,sda-all,samples/GSE303070/GSM9117079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.41000000000000003, ""uberon"": 0.6900000000000001, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9117080,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1620,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117080,,,val,sda-all,samples/GSE303070/GSM9117080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.79}",,
GSM9117081,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1549,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117081,,,val,sda-all,samples/GSE303070/GSM9117081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9117082,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1427,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117082,,,val,sda-all,samples/GSE303070/GSM9117082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM9117083,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1485,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117083,,,val,sda-all,samples/GSE303070/GSM9117083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117084,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2784,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117084,,,val,sda-all,samples/GSE303070/GSM9117084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117085,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2029,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117085,,,val,sda-all,samples/GSE303070/GSM9117085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117086,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3275,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117086,,,val,sda-all,samples/GSE303070/GSM9117086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.6900000000000001, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9117087,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2157,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117087,,,val,sda-all,samples/GSE303070/GSM9117087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9117088,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1212,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117088,,,val,sda-all,samples/GSE303070/GSM9117088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117089,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2150,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117089,,,val,sda-all,samples/GSE303070/GSM9117089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9117090,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4696,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117090,,,val,sda-all,samples/GSE303070/GSM9117090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 0.9500000000000001}",,
GSM9117091,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2549,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117091,,,val,sda-all,samples/GSE303070/GSM9117091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117092,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2177,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117092,,,val,sda-all,samples/GSE303070/GSM9117092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117093,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2203,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117093,,,val,sda-all,samples/GSE303070/GSM9117093,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117094,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2085,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117094,,,val,sda-all,samples/GSE303070/GSM9117094,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117095,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005814,colonic neoplasm;intestinal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4049,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117095,,,val,sda-all,samples/GSE303070/GSM9117095,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.42, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117096,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1528,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117096,,,val,sda-all,samples/GSE303070/GSM9117096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.71}",,
GSM9117097,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1636,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117097,,,val,sda-all,samples/GSE303070/GSM9117097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.92}",,
GSM9117098,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2392,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117098,,,val,sda-all,samples/GSE303070/GSM9117098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117099,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2050,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117099,,,val,sda-all,samples/GSE303070/GSM9117099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117100,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1889,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117100,,,val,sda-all,samples/GSE303070/GSM9117100,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117101,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2714,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117101,,,val,sda-all,samples/GSE303070/GSM9117101,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9117102,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1550,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117102,,,val,sda-all,samples/GSE303070/GSM9117102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.66}",,
GSM9117103,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1786,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117103,,,val,sda-all,samples/GSE303070/GSM9117103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.91}",,
GSM9117104,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2429,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117104,,,val,sda-all,samples/GSE303070/GSM9117104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117105,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2653,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117105,,,val,sda-all,samples/GSE303070/GSM9117105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117106,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1793,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117106,,,val,sda-all,samples/GSE303070/GSM9117106,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117107,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2105,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117107,,,val,sda-all,samples/GSE303070/GSM9117107,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117108,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1640,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117108,,,val,sda-all,samples/GSE303070/GSM9117108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 0.98}",,
GSM9117109,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2243,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117109,,,val,sda-all,samples/GSE303070/GSM9117109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.98}",,
GSM9117110,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2442,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117110,,,val,sda-all,samples/GSE303070/GSM9117110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117111,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2215,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117111,,,val,sda-all,samples/GSE303070/GSM9117111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9117112,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1798,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117112,,,val,sda-all,samples/GSE303070/GSM9117112,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117113,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3962,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117113,,,val,sda-all,samples/GSE303070/GSM9117113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117114,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1868,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117114,,,val,sda-all,samples/GSE303070/GSM9117114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 0.9500000000000001}",,
GSM9117115,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2350,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117115,,,val,sda-all,samples/GSE303070/GSM9117115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 0.6000000000000001}",,
GSM9117116,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2488,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117116,,,val,sda-all,samples/GSE303070/GSM9117116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117117,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2261,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117117,,,val,sda-all,samples/GSE303070/GSM9117117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117118,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1831,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117118,,,val,sda-all,samples/GSE303070/GSM9117118,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117119,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3814,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117119,,,val,sda-all,samples/GSE303070/GSM9117119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117120,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1688,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117120,,,val,sda-all,samples/GSE303070/GSM9117120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9117121,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2103,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117121,,,val,sda-all,samples/GSE303070/GSM9117121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 0.62}",,
GSM9117122,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2752,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117122,,,val,sda-all,samples/GSE303070/GSM9117122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117123,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2276,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117123,,,val,sda-all,samples/GSE303070/GSM9117123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117124,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1952,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117124,,,val,sda-all,samples/GSE303070/GSM9117124,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117125,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2225,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117125,,,val,sda-all,samples/GSE303070/GSM9117125,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117126,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1887,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117126,,,val,sda-all,samples/GSE303070/GSM9117126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.88}",,
GSM9117127,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2082,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117127,,,val,sda-all,samples/GSE303070/GSM9117127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9117128,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2912,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117128,,,val,sda-all,samples/GSE303070/GSM9117128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117129,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2288,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117129,,,val,sda-all,samples/GSE303070/GSM9117129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117130,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1687,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117130,,,val,sda-all,samples/GSE303070/GSM9117130,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117131,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2085,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117131,,,val,sda-all,samples/GSE303070/GSM9117131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117132,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1969,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117132,,,val,sda-all,samples/GSE303070/GSM9117132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.92}",,
GSM9117133,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2178,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117133,,,val,sda-all,samples/GSE303070/GSM9117133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.98}",,
GSM9117134,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2730,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117134,,,val,sda-all,samples/GSE303070/GSM9117134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117135,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2290,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117135,,,val,sda-all,samples/GSE303070/GSM9117135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117136,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2240,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117136,,,val,sda-all,samples/GSE303070/GSM9117136,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117137,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4920,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117137,,,val,sda-all,samples/GSE303070/GSM9117137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117138,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1809,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117138,,,val,sda-all,samples/GSE303070/GSM9117138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 0.98}",,
GSM9117139,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3791,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117139,,,val,sda-all,samples/GSE303070/GSM9117139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.91}",,
GSM9117140,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2144,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117140,,,val,sda-all,samples/GSE303070/GSM9117140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM9117141,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2976,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117141,,,val,sda-all,samples/GSE303070/GSM9117141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117142,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1661,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117142,,,val,sda-all,samples/GSE303070/GSM9117142,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9117143,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3793,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117143,,,val,sda-all,samples/GSE303070/GSM9117143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117144,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,juvenile,luna,juvenile,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1458,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117144,,,val,sda-all,samples/GSE303070/GSM9117144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9117145,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1880,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117145,,,val,sda-all,samples/GSE303070/GSM9117145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.93}",,
GSM9117146,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2750,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117146,,,val,sda-all,samples/GSE303070/GSM9117146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9117147,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2415,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117147,,,val,sda-all,samples/GSE303070/GSM9117147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117148,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1847,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117148,,,val,sda-all,samples/GSE303070/GSM9117148,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117149,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4015,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117149,,,val,sda-all,samples/GSE303070/GSM9117149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117150,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1778,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117150,,,val,sda-all,samples/GSE303070/GSM9117150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.9500000000000001}",,
GSM9117151,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2493,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117151,,,val,sda-all,samples/GSE303070/GSM9117151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 0.98}",,
GSM9117152,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1931,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117152,,,val,sda-all,samples/GSE303070/GSM9117152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM9117153,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1514,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117153,,,val,sda-all,samples/GSE303070/GSM9117153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117154,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2603,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117154,,,val,sda-all,samples/GSE303070/GSM9117154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117155,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2174,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117155,,,val,sda-all,samples/GSE303070/GSM9117155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117156,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2677,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117156,,,val,sda-all,samples/GSE303070/GSM9117156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.8, ""uberon"": 0.65, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117157,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2110,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117157,,,val,sda-all,samples/GSE303070/GSM9117157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117158,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2240,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117158,,,val,sda-all,samples/GSE303070/GSM9117158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9117159,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2174,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117159,,,val,sda-all,samples/GSE303070/GSM9117159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117160,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2584,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117160,,,val,sda-all,samples/GSE303070/GSM9117160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM9117161,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2143,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117161,,,val,sda-all,samples/GSE303070/GSM9117161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117162,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3604,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117162,,,val,sda-all,samples/GSE303070/GSM9117162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117163,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4914,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117163,,,val,sda-all,samples/GSE303070/GSM9117163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117164,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1419,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117164,,,val,sda-all,samples/GSE303070/GSM9117164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM9117165,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1377,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117165,,,val,sda-all,samples/GSE303070/GSM9117165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9117166,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2238,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117166,,,val,sda-all,samples/GSE303070/GSM9117166,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9117167,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1642,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117167,,,val,sda-all,samples/GSE303070/GSM9117167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117168,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2017,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117168,,,val,sda-all,samples/GSE303070/GSM9117168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117169,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5175,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117169,,,val,sda-all,samples/GSE303070/GSM9117169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117170,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2256,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117170,,,val,sda-all,samples/GSE303070/GSM9117170,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117171,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2188,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117171,,,val,sda-all,samples/GSE303070/GSM9117171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117172,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2130,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117172,,,val,sda-all,samples/GSE303070/GSM9117172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117173,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3063,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117173,,,val,sda-all,samples/GSE303070/GSM9117173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117174,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2227,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117174,,,val,sda-all,samples/GSE303070/GSM9117174,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117175,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2325,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117175,,,val,sda-all,samples/GSE303070/GSM9117175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117176,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2569,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117176,,,val,sda-all,samples/GSE303070/GSM9117176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117177,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1922,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117177,,,val,sda-all,samples/GSE303070/GSM9117177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117178,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2337,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117178,,,val,sda-all,samples/GSE303070/GSM9117178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117179,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2142,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117179,,,val,sda-all,samples/GSE303070/GSM9117179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9117180,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2421,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117180,,,val,sda-all,samples/GSE303070/GSM9117180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117181,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3518,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117181,,,val,sda-all,samples/GSE303070/GSM9117181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117182,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2394,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117182,,,val,sda-all,samples/GSE303070/GSM9117182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117183,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1830,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117183,,,val,sda-all,samples/GSE303070/GSM9117183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117184,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2272,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117184,,,val,sda-all,samples/GSE303070/GSM9117184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117185,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3249,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117185,,,val,sda-all,samples/GSE303070/GSM9117185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117186,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2115,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117186,,,val,sda-all,samples/GSE303070/GSM9117186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117187,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2059,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117187,,,val,sda-all,samples/GSE303070/GSM9117187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117188,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2108,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117188,,,val,sda-all,samples/GSE303070/GSM9117188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117189,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2008,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117189,,,val,sda-all,samples/GSE303070/GSM9117189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117190,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2162,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117190,,,val,sda-all,samples/GSE303070/GSM9117190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9117191,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2119,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117191,,,val,sda-all,samples/GSE303070/GSM9117191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117192,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2392,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117192,,,val,sda-all,samples/GSE303070/GSM9117192,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117193,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001156,ascending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2153,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117193,,,val,sda-all,samples/GSE303070/GSM9117193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117194,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2241,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117194,,,val,sda-all,samples/GSE303070/GSM9117194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117195,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1909,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117195,,,val,sda-all,samples/GSE303070/GSM9117195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9117196,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2053,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117196,,,val,sda-all,samples/GSE303070/GSM9117196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117197,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2760,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117197,,,val,sda-all,samples/GSE303070/GSM9117197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117198,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1623,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117198,,,val,sda-all,samples/GSE303070/GSM9117198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117199,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3433,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117199,,,val,sda-all,samples/GSE303070/GSM9117199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.4, ""uberon"": 0.61, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9117200,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2422,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117200,,,val,sda-all,samples/GSE303070/GSM9117200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117201,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2006,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117201,,,val,sda-all,samples/GSE303070/GSM9117201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117202,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2928,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117202,,,val,sda-all,samples/GSE303070/GSM9117202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117203,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0022277,hepatic flexure of colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2405,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117203,,,val,sda-all,samples/GSE303070/GSM9117203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117204,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2392,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117204,,,val,sda-all,samples/GSE303070/GSM9117204,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117205,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1267,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117205,,,val,sda-all,samples/GSE303070/GSM9117205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9117206,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1706,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117206,,,val,sda-all,samples/GSE303070/GSM9117206,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117207,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2209,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117207,,,val,sda-all,samples/GSE303070/GSM9117207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117208,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2223,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117208,,,val,sda-all,samples/GSE303070/GSM9117208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117209,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3049,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117209,,,val,sda-all,samples/GSE303070/GSM9117209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.41000000000000003, ""uberon"": 0.64, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117210,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2262,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117210,,,val,sda-all,samples/GSE303070/GSM9117210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117211,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2272,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117211,,,val,sda-all,samples/GSE303070/GSM9117211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117212,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2734,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117212,,,val,sda-all,samples/GSE303070/GSM9117212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117213,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2110,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117213,,,val,sda-all,samples/GSE303070/GSM9117213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.9500000000000001}",,
GSM9117214,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1609,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117214,,,val,sda-all,samples/GSE303070/GSM9117214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9117215,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1836,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117215,,,val,sda-all,samples/GSE303070/GSM9117215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117216,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3266,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117216,,,val,sda-all,samples/GSE303070/GSM9117216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117217,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2531,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117217,,,val,sda-all,samples/GSE303070/GSM9117217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117218,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3107,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117218,,,val,sda-all,samples/GSE303070/GSM9117218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.64, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117219,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2513,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117219,,,val,sda-all,samples/GSE303070/GSM9117219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117220,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1514,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117220,,,val,sda-all,samples/GSE303070/GSM9117220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9117221,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4280,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117221,,,val,sda-all,samples/GSE303070/GSM9117221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117222,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1867,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117222,,,val,sda-all,samples/GSE303070/GSM9117222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9117223,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2188,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117223,,,val,sda-all,samples/GSE303070/GSM9117223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117224,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3191,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117224,,,val,sda-all,samples/GSE303070/GSM9117224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117225,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2551,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117225,,,val,sda-all,samples/GSE303070/GSM9117225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9117226,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005575;MONDO:0003409,colorectal cancer;colonic disorder,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3093,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117226,,,val,sda-all,samples/GSE303070/GSM9117226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.61, ""uberon"": 0.75, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117227,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1887,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117227,,,val,sda-all,samples/GSE303070/GSM9117227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117228,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2370,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117228,,,val,sda-all,samples/GSE303070/GSM9117228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9117229,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4226,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117229,,,val,sda-all,samples/GSE303070/GSM9117229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117230,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3366,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117230,,,val,sda-all,samples/GSE303070/GSM9117230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117231,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001158,descending colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1704,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117231,,,val,sda-all,samples/GSE303070/GSM9117231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM9117232,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1990,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117232,,,val,sda-all,samples/GSE303070/GSM9117232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117233,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2112,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117233,,,val,sda-all,samples/GSE303070/GSM9117233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9117234,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2323,1207,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117234,,,val,sda-all,samples/GSE303070/GSM9117234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117235,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",primary tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3207,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117235,,,val,sda-all,samples/GSE303070/GSM9117235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.53, ""uberon"": 0.64, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9117236,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,female,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2009,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117236,,,val,sda-all,samples/GSE303070/GSM9117236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117237,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,male,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1553,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117237,,,val,sda-all,samples/GSE303070/GSM9117237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 0.99}",,
GSM9117238,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,aged,luna,aged,,male,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3153,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117238,,,val,sda-all,samples/GSE303070/GSM9117238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117239,GSE303070,GSE303070,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001153,caecum,"Colon tumour,FFPE",tumour tissue,MONDO:0005401;MONDO:0005575,colonic neoplasm;colorectal cancer,disease,luna,,,adult,luna,adult,,female,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4426,979,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9117239,,,val,sda-all,samples/GSE303070/GSM9117239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9119669,GSE303162+GSE303166,GSE303162,A novel CAF population coordinates hyper-suppressive regulatory T cell recruitment and localization in lung cancer [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0000101,lobe of lung,Lung,metastasis,MONDO:0008903,lung cancer,disease,luna,,C57B6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1858,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.375420575746022,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42581185,,GSM9119669,,,train,sda-all,samples/GSE303162/GSM9119669,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9119670,GSE303162+GSE303166,GSE303162,A novel CAF population coordinates hyper-suppressive regulatory T cell recruitment and localization in lung cancer [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,metastasis,MONDO:0008903,lung cancer,disease,luna,,C57B6J,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2697,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.381088199956986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42581185,,GSM9119670,,,train,sda-all,samples/GSE303162/GSM9119670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 1.0, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9128541,GSE303530,GSE303530,Inhibition of HIF1 signaling as a therapeutic option for metastatic castration-resistant prostate cancer.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,luna,UBERON:0002367,prostate gland,prostate,tumour tissue,MONDO:0008315,prostate cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2936,19465,counts,um,1.0,verified,True,H&E,5.827803279007619,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41896221,,GSM9128541,,,train,sda-all,samples/GSE303530/GSM9128541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130427,GSE303546,GSE303546,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph Node,tumour tissue,MONDO:0004928;MONDO:0018906,lymph node disorder;follicular lymphoma,disease,luna,admixed FL and tFL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,582846,18085,counts,um,1.0,verified,True,H&E,3.8599806360949565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130427,,,test,sda-all,samples/GSE303546/GSM9130427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130428,GSE303546,GSE303546,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph Node,tumour tissue,MONDO:0004928;MONDO:0018906,lymph node disorder;follicular lymphoma,disease,luna,admixed FL and tFL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,701837,18085,counts,um,1.0,verified,True,H&E,3.808561369496922,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130428,,,test,sda-all,samples/GSE303546/GSM9130428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130429,GSE303546,GSE303546,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph Node,tumour tissue,MONDO:0004928;MONDO:0018906,lymph node disorder;follicular lymphoma,disease,luna,admixed FL and tFL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,625873,18085,counts,um,1.0,verified,True,H&E,4.110354230625786,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130429,,,test,sda-all,samples/GSE303546/GSM9130429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130430,GSE303546,GSE303546,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph Node,tumour tissue,MONDO:0004928;MONDO:0018906,lymph node disorder;follicular lymphoma,disease,luna,admixed FL and tFL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,631346,18085,counts,um,1.0,verified,True,H&E,2.5879650587565313,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130430,,,test,sda-all,samples/GSE303546/GSM9130430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130431,GSE303546,GSE303546,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph Node,tumour tissue,MONDO:0004928;MONDO:0018906,lymph node disorder;follicular lymphoma,disease,luna,admixed FL and tFL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,681787,18085,counts,um,1.0,verified,True,H&E,4.520696008095351,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130431,,,test,sda-all,samples/GSE303546/GSM9130431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134407,GSE303705,GSE303705,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum of small intestine,primary tissue,,,perturbation,luna,,"Day 0, Day 0, Day 1, Day 3, Day 5 post-IR",not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,415262,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134407,,,val,hesrt,samples/GSE303705/GSM9134407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134408,GSE303705,GSE303705,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum of small intestine,primary tissue,,,perturbation,luna,,"Day 0, Day 1, Day 2, Day 3, Day 4, Day 5 post-IR",not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,397346,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134408,,,val,hesrt,samples/GSE303705/GSM9134408,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134409,GSE303705,GSE303705,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum of small intestine,primary tissue,,,perturbation,luna,,"Day 0, Day 1, Day 2, Day 3, Day 4, Day 5 post-IR (rep3)",not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,398382,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134409,,,val,hesrt,samples/GSE303705/GSM9134409,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134410,GSE303705,GSE303705,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum of small intestine,primary tissue,,,perturbation,luna,,"Day 0, Day 1, Day 2, Day 3, Day 4, Day 5 post-IR (rep4)",not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,433274,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134410,,,val,hesrt,samples/GSE303705/GSM9134410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9135513,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,disease,luna,,GPCMV-infected,fetal,luna,fetal,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3201,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.913027310586708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135513,,,test,sda-all,samples/GSE303764/GSM9135513,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9135514,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,disease,luna,,GPCMV-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1942,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.3180755533777395,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135514,,,test,sda-all,samples/GSE303764/GSM9135514,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9135515,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,normal,luna,,Mock-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1967,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.2057383226824125,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135515,,,test,sda-all,samples/GSE303764/GSM9135515,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM9135516,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,normal,luna,,Mock-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2583,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.332160721111343,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135516,,,test,sda-all,samples/GSE303764/GSM9135516,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9135517,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,disease,luna,,GPCMV-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3317,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.668131156785954,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135517,,,test,sda-all,samples/GSE303764/GSM9135517,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM9135518,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,disease,luna,,GPCMV-infected,fetal,luna,fetal,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3244,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.711429607729054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135518,,,test,sda-all,samples/GSE303764/GSM9135518,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9135519,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,normal,luna,,Mock-infected,fetal,luna,fetal,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3886,31681,counts,um,1.0,verified,True,H&E-like (heuristic),5.054009710139136,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),stain intensity varies,,,GSM9135519,,,test,sda-all,samples/GSE303764/GSM9135519,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9135520,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,normal,luna,,Mock-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2027,31681,counts,um,1.0,verified,True,H&E-like (heuristic),5.080804218115566,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135520,,,test,sda-all,samples/GSE303764/GSM9135520,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9135521,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,disease,luna,,GPCMV-infected,fetal,luna,fetal,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2742,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.90439536006248,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135521,,,test,sda-all,samples/GSE303764/GSM9135521,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9135522,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,disease,luna,,GPCMV-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2877,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.697426552629266,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135522,,,test,sda-all,samples/GSE303764/GSM9135522,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9135523,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,normal,luna,,Mock-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3147,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.495443547522186,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),stain intensity varies,,,GSM9135523,,,test,sda-all,samples/GSE303764/GSM9135523,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM9135524,GSE303764,GSE303764,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,Cavia porcellus,10141,domestic guinea pig,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,placenta,luna,UBERON:0001987,placenta,Maternal-fetal interface,primary tissue,,,normal,luna,,Mock-infected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3681,31681,counts,um,1.0,verified,True,H&E-like (heuristic),4.524137325622574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135524,,,test,sda-all,samples/GSE303764/GSM9135524,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.42}",disease_status;life_stage,low_confidence_annotation
GSM9136265,GSE303809,GSE303809,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,PGW9,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,Merfish,,,cell,65924,315,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136265,,,train,sda-all,samples/GSE303809/GSM9136265,sda-tissue-disease-2.3,"{""organ"": 0.36, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM9136266,GSE303809,GSE303809,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,head and neck,luna,UBERON:0000033,head,,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,PGW9,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,Merfish,,,cell,80178,315,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136266,,,train,sda-all,samples/GSE303809/GSM9136266,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM9136267,GSE303809,GSE303809,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,embryo (whole),luna,UBERON:0000922,embryo,,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,PGW9,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,Merfish,,,cell,58313,315,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136267,,,train,sda-all,samples/GSE303809/GSM9136267,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9136268,GSE303809,GSE303809,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,PGW9,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,Merfish,,,cell,317814,315,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136268,,,train,sda-all,samples/GSE303809/GSM9136268,sda-tissue-disease-2.3,"{""organ"": 0.24, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 0.87}",organ,low_confidence_annotation
GSM9136269,GSE303809,GSE303809,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,,primary tissue,,,normal,luna,,,fetal,age rule: post-conception / gestational weeks,fetal,PGW11,unknown,not stated,,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,Merfish,,,cell,146212,315,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,41997969,,GSM9136269,,,train,sda-all,samples/GSE303809/GSM9136269,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.93}",organ,low_confidence_annotation
GSM9138356,GSE303933,GSE303933,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,normal,luna,,Well-grown (non FGR),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4335,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.969545442557118,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138356,,,train,sda-all,samples/GSE303933/GSM9138356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9138357,GSE303933,GSE303933,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,disease,luna,,Growth restricted (FGR),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4791,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.930560781298076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138357,,,train,sda-all,samples/GSE303933/GSM9138357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9138358,GSE303933,GSE303933,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,normal,luna,,Well-grown (non FGR),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4961,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.977224193538518,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138358,,,train,sda-all,samples/GSE303933/GSM9138358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9138359,GSE303933,GSE303933,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,disease,luna,,Growth restricted (FGR),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4982,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.031750386098033,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138359,,,train,sda-all,samples/GSE303933/GSM9138359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 0.67}",,
GSM9138360,GSE303933,GSE303933,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,normal,luna,,Well-grown (non FGR),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.0372860674013555,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138360,,,train,sda-all,samples/GSE303933/GSM9138360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM9138361,GSE303933,GSE303933,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,placenta,primary tissue,,,disease,luna,,Growth restricted (FGR),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4053,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.9527286327423505,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138361,,,train,sda-all,samples/GSE303933/GSM9138361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9143736,GSE304111,GSE304111,Spatial transcriptomics analysis of mouse liver tissue during Alcohol-associated liver disease development and resolution,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,44347,1010,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9143736,,,train,sda-all,samples/GSE304111/GSM9143736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9144067,GSE304124,GSE304124,Mapping Cellular Senescence in Human Dental Follicle and Odontogenic Keratocyst,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Fresh frozen odontogenic keratocyst tissue,tumour tissue,MONDO:0018648,Keratocystic odontogenic tumor,disease,luna,,no treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,724,36945,counts,um,1.0,verified,True,H&E-like (heuristic),4.103808316358437,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42123694,,GSM9144067,,,train,sda-all,samples/GSE304124/GSM9144067,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9144566,GSE304160,GSE304160,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,aged,luna,aged,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,73622,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144566,,,train,sda-all,samples/GSE304160/GSM9144566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 0.52}",disease_status;life_stage,low_confidence_annotation
GSM9144567,GSE304160,GSE304160,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,85783,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144567,,,train,sda-all,samples/GSE304160/GSM9144567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9144568,GSE304160,GSE304160,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,86926,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144568,,,train,sda-all,samples/GSE304160/GSM9144568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM9144569,GSE304160,GSE304160,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,74685,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144569,,,train,sda-all,samples/GSE304160/GSM9144569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 0.44}",disease_status;life_stage,low_confidence_annotation
GSM9151611,GSE304504,GSE304504,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,eye,luna,UBERON:0004549,right eye,Posterior eyecup,primary tissue,,,perturbation,luna,,AAV2-CAG-hRPE65,adult,luna,adult,5 years,male,extracted field,male,GSE304504:NHP1,NHP1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,295,26533,counts,pixel,1.730062378523607,platform_constant,True,H&E,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151611,,,test,hesrt,samples/GSE304504/GSM9151611,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.47000000000000003, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM9151612,GSE304504,GSE304504,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,eye,luna,UBERON:0004549,right eye,Posterior eyecup,primary tissue,,,normal,luna,,Uninjected,adult,luna,adult,5 years,male,extracted field,male,GSE304504:NHP1,NHP1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,534,26533,counts,pixel,1.730062378523607,platform_constant,True,H&E,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151612,,,test,hesrt,samples/GSE304504/GSM9151612,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.26, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM9151613,GSE304504,GSE304504,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,eye,luna,UBERON:0004549,right eye,Posterior eyecup,primary tissue,,,perturbation,luna,,AAV8-GRK1-hRPGR,adult,luna,adult,6 years,male,extracted field,male,GSE304504:NHP2,NHP2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,514,26533,counts,pixel,1.730062378523607,platform_constant,True,H&E,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151613,,,test,hesrt,samples/GSE304504/GSM9151613,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.64, ""life_stage"": 0.97}",,
GSM9151614,GSE304504,GSE304504,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,eye,luna,UBERON:0004549,right eye,Posterior eyecup,primary tissue,,,normal,luna,,Uninjected,adult,luna,adult,6 years,male,extracted field,male,GSE304504:NHP2,NHP2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,470,26533,counts,pixel,1.730062378523607,platform_constant,True,H&E,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151614,,,test,hesrt,samples/GSE304504/GSM9151614,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.28, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9152863,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,58,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2480,36601,counts,um,1.0,verified,True,H&E,3.90267315280452,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152863,,,train,sda-all,samples/GSE304561/GSM9152863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9152864,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,aged,age rule: bare number read as years,aged,73,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2433,36601,counts,um,1.0,verified,True,H&E,3.9215470177186464,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152864,,,train,sda-all,samples/GSE304561/GSM9152864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9152865,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,45,female,extracted field,female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1234,36601,counts,um,1.0,verified,True,H&E,4.114786091105509,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152865,,,train,sda-all,samples/GSE304561/GSM9152865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9152866,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,aged,age rule: bare number read as years,aged,72,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3465,36601,counts,um,1.0,verified,True,H&E,4.063583455861538,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152866,,,train,sda-all,samples/GSE304561/GSM9152866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9152867,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,57,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1871,36601,counts,um,1.0,verified,True,H&E,3.94900436372168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152867,,,train,sda-all,samples/GSE304561/GSM9152867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9152868,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,57,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3485,36601,counts,um,1.0,verified,True,H&E,4.055388210329012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152868,,,train,sda-all,samples/GSE304561/GSM9152868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9152869,GSE304561,GSE304561,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,62,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2591,36601,counts,um,1.0,verified,True,H&E,3.9738563116891426,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152869,,,train,sda-all,samples/GSE304561/GSM9152869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9155022,GSE304669,GSE304669,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney allograft biopsy tissue,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1052,18061,counts,pixel,6.497887774507204,platform_constant,True,H&E,6.497887774507204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155022,,,val,hesrt,samples/GSE304669/GSM9155022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9155023,GSE304669,GSE304669,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney allograft biopsy tissue,primary tissue,MONDO:1010185,transplant rejection,disease,luna,,active AMR,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1348,18061,counts,pixel,5.198064834750562,platform_constant,True,H&E,5.198064834750562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155023,,,val,hesrt,samples/GSE304669/GSM9155023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9155024,GSE304669,GSE304669,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney allograft biopsy tissue,primary tissue,MONDO:1010185,transplant rejection,disease,luna,,acute TCMR,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,992,18061,counts,pixel,5.177104462707727,platform_constant,True,H&E,5.177104462707727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155024,,,val,hesrt,samples/GSE304669/GSM9155024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9155025,GSE304669,GSE304669,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney allograft biopsy tissue,primary tissue,MONDO:1010185,transplant rejection,disease,luna,,chronic active AMR,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1129,18061,counts,pixel,5.991509661738318,platform_constant,True,H&E,5.991509661738318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155025,,,val,hesrt,samples/GSE304669/GSM9155025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9156518,GSE304762,GSE304762,Deciphering Precursor Cell Dynamics in Esophageal Preneoplasia via Genetic Barcoding and Single-Cell Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,esophagus,luna,UBERON:0001043,esophagus,Normal esophagus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4270,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999876094498596,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41337486;42239047,,GSM9156518,,,train,sda-all,samples/GSE304762/GSM9156518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9156519,GSE304762,GSE304762,Deciphering Precursor Cell Dynamics in Esophageal Preneoplasia via Genetic Barcoding and Single-Cell Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,ESCC,xenograft,MONDO:0005580,esophageal squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,172251,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000084472142964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41337486;42239047,,GSM9156519,,,train,sda-all,samples/GSE304762/GSM9156519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.87, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9157703,GSE304811,GSE304811,RHOAY42C-driven cell lineage plasticity and immune remodeling of diffuse gastric cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Diffuse gastric cancer,xenograft,MONDO:0957519,diffuse gastric cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,261111,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999920523906405,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9157703,,,train,sda-all,samples/GSE304811/GSM9157703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.96, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM9157704,GSE304811,GSE304811,RHOAY42C-driven cell lineage plasticity and immune remodeling of diffuse gastric cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,Diffuse gastric cancer,xenograft,MONDO:0957519,diffuse gastric cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,255744,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999984107812599,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9157704,,,train,sda-all,samples/GSE304811/GSM9157704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.96, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9160367,GSE304962,GSE304962,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,Dugesia japonica,6161,,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,other,luna,UBERON:0005306,blastema,Head blastema,primary tissue,,,perturbation,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,180,38792,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160367,,,train,hesrt,samples/GSE304962/GSM9160367,sda-tissue-disease-2.4,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.9, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9160368,GSE304962,GSE304962,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,Dugesia japonica,6161,,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,other,luna,UBERON:0005306,blastema,Head blastema,primary tissue,,,perturbation,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,201,38792,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160368,,,train,hesrt,samples/GSE304962/GSM9160368,sda-tissue-disease-2.4,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.9400000000000001, ""life_stage"": 0.48}",organ;life_stage,low_confidence_annotation
GSM9160369,GSE304962,GSE304962,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,Dugesia japonica,6161,,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,other,luna,UBERON:0005306,blastema,Head blastema,primary tissue,,,perturbation,luna,,WT,adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,402,38792,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160369,,,train,hesrt,samples/GSE304962/GSM9160369,sda-tissue-disease-2.4,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 0.37}",organ;life_stage,low_confidence_annotation
GSM9160370,GSE304962,GSE304962,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,Dugesia japonica,6161,,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,other,luna,UBERON:0005306,blastema,Head blastema,primary tissue,,,perturbation,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,433,38792,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160370,,,train,hesrt,samples/GSE304962/GSM9160370,sda-tissue-disease-2.4,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.9500000000000001, ""life_stage"": 0.51}",organ;life_stage,low_confidence_annotation
GSM9162384,GSE305111,GSE305111,Rete ridges form via evolutionarily distinct mechanisms in mammalian skin,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,skin,luna,UBERON:0000014,zone of skin,Dorsal skin,primary tissue,,,normal,luna,,WT,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,Fixed-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,6054,25897,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41639458,,GSM9162384,,,train,sda-all,samples/GSE305111/GSM9162384,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 0.72}",uberon,low_confidence_annotation
GSM9162385,GSE305111,GSE305111,Rete ridges form via evolutionarily distinct mechanisms in mammalian skin,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,skin,luna,UBERON:0000014,zone of skin,Dorsal skin,primary tissue,,,normal,luna,,WT,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,Fixed-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,13609,29824,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41639458,,GSM9162385,,,train,sda-all,samples/GSE305111/GSM9162385,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9162386,GSE305111,GSE305111,Rete ridges form via evolutionarily distinct mechanisms in mammalian skin,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,skin,luna,UBERON:0000014,zone of skin,Dorsal skin,primary tissue,,,normal,luna,,WT,adult,luna,adult,,unknown,not stated,,,,fixed frozen,Fixed-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,13986,30495,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41639458,,GSM9162386,,,train,sda-all,samples/GSE305111/GSM9162386,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 0.71}",uberon,low_confidence_annotation
GSM9162435,GSE305116,GSE305116,Spatial transcriptomics reveals distinct immune microenvironment characteristics between intestinal-type gastric cancer and paired normal gastric mucosa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0001199,mucosa of stomach,Gastric cancer and matched normal gastric mucosa tissues,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2501,37487,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41734377,,GSM9162435,,,val,sda-all,samples/GSE305116/GSM9162435,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.49, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9162436,GSE305116,GSE305116,Spatial transcriptomics reveals distinct immune microenvironment characteristics between intestinal-type gastric cancer and paired normal gastric mucosa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0001199,mucosa of stomach,Gastric cancer and matched normal gastric mucosa tissues,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3274,37487,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41734377,,GSM9162436,,,val,sda-all,samples/GSE305116/GSM9162436,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.52, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9168623,GSE305314,GSE305314,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,Tau transgenic,adult,age rule: age with unit,adult,10 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7451,19465,counts,pixel,4.784812320210513,platform_constant,True,H&E,4.784812320210513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168623,,,train,hesrt,samples/GSE305314/GSM9168623,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9168624,GSE305314,GSE305314,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,adult,age rule: age with unit,adult,10 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7036,19465,counts,pixel,4.871362724293727,platform_constant,True,H&E,4.871362724293727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168624,,,train,hesrt,samples/GSE305314/GSM9168624,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9168625,GSE305314,GSE305314,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,Tau transgenic,aged,age rule: age with unit,adult,20 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5576,19465,counts,pixel,4.668959632635702,platform_constant,True,H&E,4.668959632635702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168625,,,train,hesrt,samples/GSE305314/GSM9168625,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,feature_species_differs
GSM9168626,GSE305314,GSE305314,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,wild type,aged,age rule: age with unit,adult,20 months,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6080,19465,counts,pixel,4.753040553104631,platform_constant,True,H&E,4.753040553104631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168626,,,train,hesrt,samples/GSE305314/GSM9168626,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.91}",,feature_species_differs
GSM9170946,GSE305393,GSE305393,Microbial signals in primary and metastatic brain tumors [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Glioma tissue,tumour tissue,MONDO:0021211;MONDO:0021042,brain neoplasm;glioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,32953,6524,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41238915,,GSM9170946,,,val,sda-all,samples/GSE305393/GSM9170946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9170947,GSE305393,GSE305393,Microbial signals in primary and metastatic brain tumors [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Brain metastasis tissue,metastasis,MONDO:0021211,brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,66971,6524,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41238915,,GSM9170947,,,val,sda-all,samples/GSE305393/GSM9170947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9181142,GSE305629,GSE305629,Neutrophils and CD8+ T cells in Muscle-invasive Bladder Cancer (MIBC),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Biopsies in FFPE blocks from MIBC patient,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,641682,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999994558119286,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42009646,,GSM9181142,,,train,sda-all,samples/GSE305629/GSM9181142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9181143,GSE305629,GSE305629,Neutrophils and CD8+ T cells in Muscle-invasive Bladder Cancer (MIBC),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Biopsies in FFPE blocks from MIBC patient,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,155081,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999934646218195,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42009646,,GSM9181143,,,train,sda-all,samples/GSE305629/GSM9181143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9187667,GSE305911,GSE305911,Engineered thoracic spinal cord organoids for transplantation after spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,engineered tissue,MONDO:0043797,spinal cord injury,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3138,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.035941294921823,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136603,,GSM9187667,,,train,sda-all,samples/GSE305911/GSM9187667,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.34, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 0.74}",sample_kind;disease_status,low_confidence_annotation
GSM9187668,GSE305911,GSE305911,Engineered thoracic spinal cord organoids for transplantation after spinal cord injury,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spinal cord,luna,UBERON:0002240,spinal cord,Spinal cord,primary tissue,MONDO:0043797,spinal cord injury,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2630,68886,counts,um,1.0,verified,True,H&E-like (heuristic),4.053224442338716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136603,,GSM9187668,,,train,sda-all,samples/GSE305911/GSM9187668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.36, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.88}",sample_kind;disease_status,low_confidence_annotation
GSM9190966,GSE305978,GSE305978,Thyroid Hormone Promotes Fetal Neurogenesis [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,brain organoid,organoid,,,perturbation,luna,,WT and MCT8 deficient,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,62476,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,40906530,,GSM9190966,,,train,sda-all,samples/GSE305978/GSM9190966,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9191675,GSE306019,GSE306019,Genetic deletion of Usp22 in KRASG12D-p53-null driven mouse lung cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,KP,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3405,19465,counts,um,1.0,verified,True,H&E-like (heuristic),8.223726475175026,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42707650,,GSM9191675,,,train,sda-all,samples/GSE306019/GSM9191675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9191676,GSE306019,GSE306019,Genetic deletion of Usp22 in KRASG12D-p53-null driven mouse lung cancer [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,KPU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3511,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.603060548429689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42707650,,GSM9191676,,,train,sda-all,samples/GSE306019/GSM9191676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193450,GSE306111,GSE306111,Spatial transcriptomics of human FALD and normal livers,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,normal,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,289129,1167,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41758081,,GSM9193450,,,test,sda-all,samples/GSE306111/GSM9193450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193451,GSE306111,GSE306111,Spatial transcriptomics of human FALD and normal livers,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,FALD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,241700,1167,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41758081,,GSM9193451,,,test,sda-all,samples/GSE306111/GSM9193451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193452,GSE306111,GSE306111,Spatial transcriptomics of human FALD and normal livers,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,FALD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,215573,1167,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41758081,,GSM9193452,,,test,sda-all,samples/GSE306111/GSM9193452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9309755,GSE306111,GSE306111,Spatial transcriptomics of human FALD and normal livers,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,332223,1167,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41758081,,GSM9309755,,,test,sda-all,samples/GSE306111/GSM9309755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9309756,GSE306111,GSE306111,Spatial transcriptomics of human FALD and normal livers,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,46979,1167,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41758081,,GSM9309756,,,test,sda-all,samples/GSE306111/GSM9309756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193794,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,36561,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000171703296703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193794,,,train,sda-all,samples/GSE306130/GSM9193794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193795,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0020804,skin carcinoma;basal cell carcinoma,disease,luna,,IC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,99222,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000167491238919,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193795,,,train,sda-all,samples/GSE306130/GSM9193795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193796,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,143576,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117370892019,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193796,,,train,sda-all,samples/GSE306130/GSM9193796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193797,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,87249,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000028227324049,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193797,,,train,sda-all,samples/GSE306130/GSM9193797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193798,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0020804,skin carcinoma;basal cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,190755,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051741470048,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193798,,,train,sda-all,samples/GSE306130/GSM9193798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193799,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,64284,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077407369181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193799,,,train,sda-all,samples/GSE306130/GSM9193799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9193800,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,73107,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999226086059223,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193800,,,train,sda-all,samples/GSE306130/GSM9193800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193801,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0020804,skin carcinoma;basal cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,116786,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000123946455131,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193801,,,train,sda-all,samples/GSE306130/GSM9193801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193802,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0020804,skin carcinoma;basal cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,150455,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917159109737,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193802,,,train,sda-all,samples/GSE306130/GSM9193802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193803,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,92520,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999770347234984,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193803,,,train,sda-all,samples/GSE306130/GSM9193803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193804,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,248639,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000079557026477,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193804,,,train,sda-all,samples/GSE306130/GSM9193804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9193805,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096,skin carcinoma;squamous cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,187335,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999906113865106,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193805,,,train,sda-all,samples/GSE306130/GSM9193805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9193806,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096;MONDO:0020804,skin carcinoma;squamous cell carcinoma;basal cell carcinoma,disease,luna,,IC/IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,125749,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999989085352543,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193806,,,train,sda-all,samples/GSE306130/GSM9193806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193807,GSE306130,GSE306130,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Tumor,tumour tissue,MONDO:0002656;MONDO:0005096;MONDO:0020804,skin carcinoma;squamous cell carcinoma;basal cell carcinoma,disease,luna,,IS,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,XENIUM,,,cell,247159,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054537521815,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193807,,,train,sda-all,samples/GSE306130/GSM9193807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9194119,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0006656,aortitis,disease,luna,Giant Cell Aortitis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:GCA1,GCA1,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55867,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500010294844342,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194119,,,train,sda-all,samples/GSE306150/GSM9194119,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9194120,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0006656,aortitis,disease,luna,Giant Cell Aortitis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:GCA1,GCA1,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,58078,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998764415156505,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194120,,,train,sda-all,samples/GSE306150/GSM9194120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9194121,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0006656,aortitis,disease,luna,Giant Cell Aortitis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:GCA2,GCA2,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45520,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499991258359194,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194121,,,train,sda-all,samples/GSE306150/GSM9194121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9194122,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0006656,aortitis,disease,luna,Giant Cell Aortitis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:GCA2,GCA2,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,49028,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998846695479043,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194122,,,train,sda-all,samples/GSE306150/GSM9194122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9194123,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0006656,aortitis,disease,luna,Giant Cell Aortitis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:GCA3,GCA3,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38722,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999016301292853,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194123,,,train,sda-all,samples/GSE306150/GSM9194123,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9194124,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0006656,aortitis,disease,luna,Giant Cell Aortitis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:GCA3,GCA3,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45053,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000274122807018,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194124,,,train,sda-all,samples/GSE306150/GSM9194124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9194125,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001496,ascending aorta,ascending aorta,primary tissue,MONDO:0018672;MONDO:0006656,IgG4-related aortitis;aortitis,disease,luna,IgG4-related Aortitis,,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59298,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999908670238675,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194125,,,train,sda-all,samples/GSE306150/GSM9194125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9485373,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Aorta,primary tissue,MONDO:0042981,aortic valve stenosis,disease,luna,Aortic Stenosis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:AS1,AS1,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35491,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9485373,,,train,sda-all,samples/GSE306150/GSM9485373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485374,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Aorta,primary tissue,MONDO:0042981,aortic valve stenosis,disease,luna,Aortic Stenosis,,not stated,luna,not stated,,male,extracted field,Male,GSE306150:AS2,AS2,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28664,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051402723202,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9485374,,,train,sda-all,samples/GSE306150/GSM9485374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485375,GSE306150,GSE306150,Spatial gene expression profiling of aortitis samples.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0000947,aorta,Aorta,primary tissue,MONDO:0042981,aortic valve stenosis,disease,luna,Aortic Stenosis,,not stated,luna,not stated,,female,extracted field,Female,GSE306150:AS3,AS3,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,25952,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500003144654088,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9485375,,,train,sda-all,samples/GSE306150/GSM9485375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9196846,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,85,male,extracted field,male,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1573,36601,counts,um,1.0,verified,True,H&E,4.250773636138519,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196846,,,train,sda-all,samples/GSE306288/GSM9196846,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9196847,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,85,male,extracted field,male,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1264,36601,counts,um,1.0,verified,True,H&E,4.248252316180852,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196847,,,train,sda-all,samples/GSE306288/GSM9196847,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9196848,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1658,36601,counts,um,1.0,verified,True,H&E,4.252674145216183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196848,,,train,sda-all,samples/GSE306288/GSM9196848,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9196849,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1693,36601,counts,um,1.0,verified,True,H&E,4.252107322743187,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196849,,,train,sda-all,samples/GSE306288/GSM9196849,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759909,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,75,female,extracted field,female,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1801,36601,counts,um,1.0,verified,True,H&E,3.9299475520782594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759909,,,train,sda-all,samples/GSE306288/GSM9759909,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759910,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,80,male,extracted field,male,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1713,36601,counts,um,1.0,verified,True,H&E,4.115703000462613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759910,,,train,sda-all,samples/GSE306288/GSM9759910,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759911,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,adult,age rule: bare number read as years,adult,63,female,extracted field,female,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1512,36601,counts,um,1.0,verified,True,H&E,3.986973137459267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759911,,,train,sda-all,samples/GSE306288/GSM9759911,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759912,GSE306288,GSE306288,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0011742,aortic valve leaflet,aortic valve leaflet,primary tissue,MONDO:0002123,calcinosis,disease,luna,diseased,,aged,age rule: bare number read as years,aged,82,male,extracted field,male,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1244,36601,counts,um,1.0,verified,True,H&E,4.043655528245771,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759912,,,train,sda-all,samples/GSE306288/GSM9759912,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9197415,GSE306327,GSE306327,Scar-associated endothelial-stellate cellular crosstalk drives fibrosis resolution in MASH [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2141,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.934974302979163,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9197415,,,test,sda-all,samples/GSE306327/GSM9197415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9197416,GSE306327,GSE306327,Scar-associated endothelial-stellate cellular crosstalk drives fibrosis resolution in MASH [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1726,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.93490261074502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9197416,,,test,sda-all,samples/GSE306327/GSM9197416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9198042,GSE306374,GSE306374,Genetic profiles of small intestinal and colonic metaplastic Paneth cells by spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,"terminal ileum, colon",primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,ulcerative colitis,ulcerative colitis,not stated,luna,not stated,,unknown,not stated,,GSE306374:patient 1,patient 1,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,39445,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904124,,GSM9198042,,,test,hesrt,samples/GSE306374/GSM9198042,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9198043,GSE306374,GSE306374,Genetic profiles of small intestinal and colonic metaplastic Paneth cells by spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,"terminal ileum, colon",primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,ulcerative colitis,ulcerative colitis,not stated,luna,not stated,,unknown,not stated,,GSE306374:patient 2,patient 2,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,65250,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904124,,GSM9198043,,,test,hesrt,samples/GSE306374/GSM9198043,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9202342,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, Group 3",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3361,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.231476136709108,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202342,,,train,sda-all,samples/GSE306506/GSM9202342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.67}",,
GSM9202343,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, SHH",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3457,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.133236405774021,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202343,,,train,sda-all,samples/GSE306506/GSM9202343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9202344,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, SHH",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2714,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.230161778382331,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202344,,,train,sda-all,samples/GSE306506/GSM9202344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9202345,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, SHH",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3817,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.953643722375171,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202345,,,train,sda-all,samples/GSE306506/GSM9202345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 0.7000000000000001}",uberon,low_confidence_annotation
GSM9202346,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, SHH",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3613,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.93711650704432,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202346,,,train,sda-all,samples/GSE306506/GSM9202346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM9202347,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, Group 4",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3984,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.9508176930587173,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202347,,,train,sda-all,samples/GSE306506/GSM9202347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9202348,GSE306506,GSE306506,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,"pediatric medulloblastoma, Group 4",tumour tissue,MONDO:0002797,childhood medulloblastoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2385,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.2310882110207455,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202348,,,train,sda-all,samples/GSE306506/GSM9202348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9204000,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5484,18095,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204000,,,train,sda-all,samples/GSE306575/GSM9204000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9204001,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5289,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204001,,,train,sda-all,samples/GSE306575/GSM9204001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9204002,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,cell culture,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1575,18095,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204002,,,train,sda-all,samples/GSE306575/GSM9204002,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9204003,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7788,37120,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204003,,,train,sda-all,samples/GSE306575/GSM9204003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9204004,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4313,37120,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204004,,,train,sda-all,samples/GSE306575/GSM9204004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9204005,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11788,37120,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204005,,,train,sda-all,samples/GSE306575/GSM9204005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9204006,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8640,37120,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204006,,,train,sda-all,samples/GSE306575/GSM9204006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9204007,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13348,37120,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204007,,,train,sda-all,samples/GSE306575/GSM9204007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9204008,GSE306575,GSE306575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10732,37120,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204008,,,train,sda-all,samples/GSE306575/GSM9204008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9204716,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4242,18085,counts,um,1.0,verified,True,H&E-like (heuristic),14.670394019471681,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204716,,,val,sda-all,samples/GSE306617/GSM9204716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204717,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4537,18085,counts,um,1.0,verified,True,H&E-like (heuristic),14.780835720822205,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204717,,,val,sda-all,samples/GSE306617/GSM9204717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204718,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3565,18085,counts,um,1.0,verified,True,H&E-like (heuristic),17.120759614244278,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204718,,,val,sda-all,samples/GSE306617/GSM9204718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204719,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3844,18085,counts,um,1.0,verified,True,H&E-like (heuristic),15.880780262708463,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204719,,,val,sda-all,samples/GSE306617/GSM9204719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204720,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4126,18085,counts,um,1.0,verified,True,H&E-like (heuristic),16.56777555422276,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204720,,,val,sda-all,samples/GSE306617/GSM9204720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204721,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3884,18085,counts,um,1.0,verified,True,H&E-like (heuristic),18.843301761700374,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204721,,,val,sda-all,samples/GSE306617/GSM9204721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204722,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4715,18085,counts,um,1.0,verified,True,H&E-like (heuristic),16.28339388545875,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204722,,,val,sda-all,samples/GSE306617/GSM9204722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9204723,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),15.531534060944814,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204723,,,val,sda-all,samples/GSE306617/GSM9204723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204724,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4710,18085,counts,um,1.0,verified,True,H&E-like (heuristic),13.84612528585095,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204724,,,val,sda-all,samples/GSE306617/GSM9204724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204725,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4925,18085,counts,um,1.0,verified,True,H&E-like (heuristic),16.655429638240157,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204725,,,val,sda-all,samples/GSE306617/GSM9204725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204726,GSE306617,GSE306617,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreas,tumour tissue,MONDO:0005614,pancreatic adenosquamous carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4750,18085,counts,um,1.0,verified,True,H&E-like (heuristic),19.352046305293083,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204726,,,val,sda-all,samples/GSE306617/GSM9204726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9194282,GSE306678,GSE306678,SPP1+ Macrophages Contribute to Hair Growth in Contact Hypersensitivity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0000605,hypersensitivity reaction disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,249140,32285,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9194282,,,train,hesrt,samples/GSE306678/GSM9194282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9206470,GSE306706,GSE306706,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3871,20648,counts,um,1.0,verified,True,H&E,4.092103638631796,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206470,,,train,sda-all,samples/GSE306706/GSM9206470,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9206471,GSE306706,GSE306706,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,,M. hyopneumoniae JS strain,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4030,20648,counts,um,1.0,verified,True,H&E,4.121958167702157,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206471,,,train,sda-all,samples/GSE306706/GSM9206471,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9206472,GSE306706,GSE306706,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,PBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3959,20648,counts,um,1.0,verified,True,H&E,4.092537768571874,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206472,,,train,sda-all,samples/GSE306706/GSM9206472,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9206473,GSE306706,GSE306706,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,Sus scrofa,9823,pig,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005550,infectious disease,disease,luna,,M. hyopneumoniae JS strain,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4686,20648,counts,um,1.0,verified,True,H&E,4.057772611676443,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206473,,,train,sda-all,samples/GSE306706/GSM9206473,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210422,GSE306833,GSE306833,10X VisiumHD Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD).,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,normal,luna,,control dieet,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,500025,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41616823,,GSM9210422,,,train,hesrt,samples/GSE306833/GSM9210422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210423,GSE306833,GSE306833,10X VisiumHD Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD).,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,,,perturbation,luna,,stearic acid-rich HFD,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,570718,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41616823,,GSM9210423,,,train,hesrt,samples/GSE306833/GSM9210423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210725,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43526,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500020640686922,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210725,,,train,sda-all,samples/GSE306852/GSM9210725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210726,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32584,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999898593834505,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210726,,,train,sda-all,samples/GSE306852/GSM9210726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210727,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,89371,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500008607629803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210727,,,train,sda-all,samples/GSE306852/GSM9210727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210728,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41251,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000164500740253,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210728,,,train,sda-all,samples/GSE306852/GSM9210728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210729,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26648,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998323878287776,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210729,,,train,sda-all,samples/GSE306852/GSM9210729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210730,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50960,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999742692466035,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210730,,,train,sda-all,samples/GSE306852/GSM9210730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210731,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54143,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000072314049586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210731,,,train,sda-all,samples/GSE306852/GSM9210731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210732,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,44621,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000090178295372,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210732,,,train,sda-all,samples/GSE306852/GSM9210732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210733,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50676,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999917430435141,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210733,,,train,sda-all,samples/GSE306852/GSM9210733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210734,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41112,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000058788947678,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210734,,,train,sda-all,samples/GSE306852/GSM9210734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210735,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15441,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499985632183908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210735,,,train,sda-all,samples/GSE306852/GSM9210735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210736,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34980,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499967461296068,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210736,,,train,sda-all,samples/GSE306852/GSM9210736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210737,GSE306852,GSE306852,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240,kidney disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,44598,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997500000000006,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210737,,,train,sda-all,samples/GSE306852/GSM9210737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9211260,GSE306881,GSE306881,Peptidoglycan from Bifidobacterium adolescentis enhances IL-10 production in regulatory B cells to alleviate gut inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,477376,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998968467685895,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,CG-17739d1ad2a9,cross_gse_redeposit,GSM8803514,val,sda-all,samples/GSE306881/GSM9211260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9211261,GSE306881,GSE306881,Peptidoglycan from Bifidobacterium adolescentis enhances IL-10 production in regulatory B cells to alleviate gut inflammation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002108,small intestine,small intestine,primary tissue,MONDO:0005011,Crohn disease,disease,luna,Crohn's disease,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,381551,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999338624338624,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9211261,,,val,sda-all,samples/GSE306881/GSM9211261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9214538,GSE307031,GSE307031,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000966,retina,Retina,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,95887,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103476821192,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214538,,,train,sda-all,samples/GSE307031/GSM9214538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9214539,GSE307031,GSE307031,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000966,retina,Retina,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,70558,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999890452310239,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214539,,,train,sda-all,samples/GSE307031/GSM9214539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9214540,GSE307031,GSE307031,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000966,retina,Retina,primary tissue,,,normal,luna,,,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,54628,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103455410718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214540,,,train,sda-all,samples/GSE307031/GSM9214540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9214541,GSE307031,GSE307031,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000966,retina,Retina,primary tissue,,,normal,luna,,,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,64265,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.500008173852391,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214541,,,train,sda-all,samples/GSE307031/GSM9214541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9214542,GSE307031,GSE307031,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000966,retina,Retina,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,65560,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999885499679403,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214542,,,train,sda-all,samples/GSE307031/GSM9214542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9214543,GSE307031,GSE307031,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000966,retina,Retina,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,92464,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000043145105619,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214543,,,train,sda-all,samples/GSE307031/GSM9214543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216987,GSE307128+GSE307351,GSE307128,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,192895,19059,counts,um,1.0,verified,True,H&E,4.691560238912609,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216987,,,train,sda-all,samples/GSE307128/GSM9216987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216988,GSE307128+GSE307351,GSE307128,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,178431,19059,counts,um,1.0,verified,True,H&E,4.69163305777653,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216988,,,train,sda-all,samples/GSE307128/GSM9216988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216989,GSE307128+GSE307351,GSE307128,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,199155,19059,counts,um,1.0,verified,True,H&E,4.696546255151453,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216989,,,train,sda-all,samples/GSE307128/GSM9216989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216990,GSE307128+GSE307351,GSE307128,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,disease,luna,,Bleomycin,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,260851,19059,counts,um,1.0,verified,True,H&E,4.696222104980737,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216990,,,train,sda-all,samples/GSE307128/GSM9216990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9219222,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,592669,18085,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,FAIL,,,42754741,,GSM9219222,,,val,sda-all,samples/GSE307215/GSM9219222,sda-tissue-disease-2.3,"{""organ"": 0.47000000000000003, ""sample_kind"": 0.97, ""disease_status"": 0.24, ""uberon"": 0.34, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM9219223,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,145780,18085,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,FAIL,,,42754741,,GSM9219223,,,val,sda-all,samples/GSE307215/GSM9219223,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 0.97, ""disease_status"": 0.45, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219224,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,550017,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.2641570919027365,FAILED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219224,,,val,sda-all,samples/GSE307215/GSM9219224,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.98, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219225,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,258967,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.088512056420174,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219225,,,val,sda-all,samples/GSE307215/GSM9219225,sda-tissue-disease-2.3,"{""organ"": 0.31, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219226,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,222220,18085,counts,um,1.0,verified,True,H&E-like (heuristic),2.7625894693846567,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219226,,,val,sda-all,samples/GSE307215/GSM9219226,sda-tissue-disease-2.3,"{""organ"": 0.33, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.67, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219227,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,221682,18085,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,FAIL,,,42754741,,GSM9219227,,,val,sda-all,samples/GSE307215/GSM9219227,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.96, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219228,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,168857,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.041369508157627,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219228,,,val,sda-all,samples/GSE307215/GSM9219228,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.98, ""disease_status"": 0.6900000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9219229,GSE307215,GSE307215,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0001007,digestive system,gut,primary tissue,MONDO:0013730,graft versus host disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,272298,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.59109527903929,VERIFIED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219229,,,val,sda-all,samples/GSE307215/GSM9219229,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 0.98, ""disease_status"": 0.53, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9223468,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45898,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999187063970674,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223468,,,train,sda-all,samples/GSE307404/GSM9223468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223469,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61222,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999976980801989,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223469,,,train,sda-all,samples/GSE307404/GSM9223469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223470,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41266,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999868440835964,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223470,,,train,sda-all,samples/GSE307404/GSM9223470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223471,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57508,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000132908027645,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223471,,,train,sda-all,samples/GSE307404/GSM9223471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223472,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66560,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020683949256,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223472,,,train,sda-all,samples/GSE307404/GSM9223472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223473,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56715,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000013787018143,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223473,,,train,sda-all,samples/GSE307404/GSM9223473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223474,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46917,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048294513743,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223474,,,train,sda-all,samples/GSE307404/GSM9223474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223475,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,71389,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999727443199155,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223475,,,train,sda-all,samples/GSE307404/GSM9223475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223476,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59787,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999654807382515,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223476,,,train,sda-all,samples/GSE307404/GSM9223476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223477,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48542,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000013787018143,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223477,,,train,sda-all,samples/GSE307404/GSM9223477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.12, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223478,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,62396,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000089610676078,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223478,,,train,sda-all,samples/GSE307404/GSM9223478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223479,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45675,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999870720860482,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223479,,,train,sda-all,samples/GSE307404/GSM9223479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223480,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63221,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000067007797271,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223480,,,train,sda-all,samples/GSE307404/GSM9223480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223481,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61932,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223481,,,train,sda-all,samples/GSE307404/GSM9223481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223482,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56956,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097456388266,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223482,,,train,sda-all,samples/GSE307404/GSM9223482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223483,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59962,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999934646218195,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223483,,,train,sda-all,samples/GSE307404/GSM9223483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223484,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,44655,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000047697786822,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223484,,,train,sda-all,samples/GSE307404/GSM9223484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223485,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68976,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999945244816509,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223485,,,train,sda-all,samples/GSE307404/GSM9223485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223486,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46286,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999756465832157,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223486,,,train,sda-all,samples/GSE307404/GSM9223486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223487,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45793,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000116423470972,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223487,,,train,sda-all,samples/GSE307404/GSM9223487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223488,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59438,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500013109958048,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223488,,,train,sda-all,samples/GSE307404/GSM9223488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223489,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67472,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999756667315554,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223489,,,train,sda-all,samples/GSE307404/GSM9223489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223490,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47384,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000055151114052,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223490,,,train,sda-all,samples/GSE307404/GSM9223490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223491,GSE307404,GSE307404,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0009834,dorsolateral prefrontal cortex,dorsolateral prefrontal cortex,primary tissue,MONDO:0005090,schizophrenia,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,53201,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000064656287176,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223491,,,train,sda-all,samples/GSE307404/GSM9223491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9225625,GSE307496,GSE307496,Dissecting the development of bovine testicular tissue using spatial transcriptomics,Bos taurus,9913,domestic cattle,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,testis,luna,UBERON:0000473,testis,testis,primary tissue,,,normal,luna,,calves,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,538856,20845,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41639718,,GSM9225625,,,train,sda-all,samples/GSE307496/GSM9225625,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9225626,GSE307496,GSE307496,Dissecting the development of bovine testicular tissue using spatial transcriptomics,Bos taurus,9913,domestic cattle,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,testis,luna,UBERON:0000473,testis,testis,primary tissue,,,normal,luna,,adult bovine,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,394125,20491,counts,um,1.0,verified,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41639718,,GSM9225626,,,train,sda-all,samples/GSE307496/GSM9225626,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM9225693,GSE307504,GSE307504,Single-cell and spatial transcriptomic atlas of pathological scars uncovers neuro-fibroblast crosstalk mechanisms across scar types,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,hypertrophic scar tissue,primary tissue,,,disease,luna,,,juvenile,luna,juvenile,,female,sample text,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1981,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.370789328404686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9225693,,,train,sda-all,samples/GSE307504/GSM9225693,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9225694,GSE307504,GSE307504,Single-cell and spatial transcriptomic atlas of pathological scars uncovers neuro-fibroblast crosstalk mechanisms across scar types,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,keloid tissue,primary tissue,MONDO:0005348,keloid,disease,luna,,,juvenile,luna,juvenile,,male,sample text,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4062,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.2666617692136475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9225694,,,train,sda-all,samples/GSE307504/GSM9225694,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226168,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE307534:P1,P1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10108,18085,counts,pixel,5.701564845196209,platform_constant,True,H&E,5.701564845196209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226168,,,train,hesrt,samples/GSE307534/GSM9226168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.52, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9226169,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE307534:P1,P1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6603,18085,counts,pixel,5.217514893973237,platform_constant,True,H&E,5.217514893973237,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41202811,,GSM9226169,,,train,hesrt,samples/GSE307534/GSM9226169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226170,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE307534:P2,P2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11782,18085,counts,pixel,6.429312925613559,platform_constant,True,H&E,6.429312925613559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226170,,,train,hesrt,samples/GSE307534/GSM9226170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9226171,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE307534:P2,P2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10995,18085,counts,pixel,6.166760402593427,platform_constant,True,H&E,6.166760402593427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226171,,,train,hesrt,samples/GSE307534/GSM9226171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226172,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P3,P3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9954,18085,counts,pixel,5.768583445809624,platform_constant,True,H&E,5.768583445809624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226172,,,train,hesrt,samples/GSE307534/GSM9226172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226173,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P3,P3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,14336,18085,counts,pixel,6.665375453911785,platform_constant,True,H&E,6.665375453911785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226173,,,train,hesrt,samples/GSE307534/GSM9226173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226174,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,Normal,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE307534:P4,P4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12453,18120,counts,pixel,6.047162453144086,platform_constant,True,H&E,6.047162453144086,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226174,,,train,hesrt,samples/GSE307534/GSM9226174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226175,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE307534:P4,P4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12441,18085,counts,pixel,6.739254126338237,platform_constant,True,H&E,6.739254126338237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226175,,,train,hesrt,samples/GSE307534/GSM9226175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226176,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,74,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12295,18120,counts,um,1.0,verified,True,H&E,6.173587455641155,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226176,,,train,sda-all,samples/GSE307534/GSM9226176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9226177,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE307534:P4,P4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12978,18085,counts,pixel,6.973259535740269,platform_constant,True,H&E,6.973259535740269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226177,,,train,hesrt,samples/GSE307534/GSM9226177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226178,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE307534:P5,P5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10499,18085,counts,pixel,6.1960425716388805,platform_constant,True,H&E,6.1960425716388805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226178,,,train,hesrt,samples/GSE307534/GSM9226178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226179,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE307534:P5,P5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12084,18085,counts,pixel,6.46479488853165,platform_constant,True,H&E,6.46479488853165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226179,,,train,hesrt,samples/GSE307534/GSM9226179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226180,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE307534:P6,P6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11229,18120,counts,pixel,6.195102535604207,platform_constant,True,H&E,6.195102535604207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226180,,,train,hesrt,samples/GSE307534/GSM9226180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9226181,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE307534:P6,P6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11724,18085,counts,pixel,7.493411096255623,platform_constant,True,H&E,7.493411096255623,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226181,,,train,hesrt,samples/GSE307534/GSM9226181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9226182,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE307534:P7,P7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13616,18120,counts,pixel,6.375278173988304,platform_constant,True,H&E,6.375278173988304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226182,,,train,hesrt,samples/GSE307534/GSM9226182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226183,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE307534:P7,P7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13074,18120,counts,pixel,6.224090504310239,platform_constant,True,H&E,6.224090504310239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226183,,,train,hesrt,samples/GSE307534/GSM9226183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226184,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE307534:P8,P8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,5108,18120,counts,pixel,6.295169536999984,platform_constant,True,H&E,6.295169536999984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226184,,,train,hesrt,samples/GSE307534/GSM9226184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226185,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE307534:P8,P8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12642,18120,counts,pixel,7.354007608519195,platform_constant,True,H&E,7.354007608519195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226185,,,train,hesrt,samples/GSE307534/GSM9226185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226186,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE307534:P9,P9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10979,18120,counts,pixel,6.0063620427778135,platform_constant,True,H&E,6.0063620427778135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226186,,,train,hesrt,samples/GSE307534/GSM9226186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9226187,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE307534:P9,P9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11029,18120,counts,pixel,6.34203534995169,platform_constant,True,H&E,6.34203534995169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226187,,,train,hesrt,samples/GSE307534/GSM9226187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226188,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE307534:P9,P9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12127,18120,counts,pixel,6.665546262216075,platform_constant,True,H&E,6.665546262216075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226188,,,train,hesrt,samples/GSE307534/GSM9226188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226189,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,minimally invasive adenocarcinoma,MIA,adult,age rule: bare number read as years,adult,58,female,extracted field,female,GSE307534:P10,P10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12180,18120,counts,pixel,6.027185086382337,platform_constant,True,H&E,6.027185086382337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226189,,,train,hesrt,samples/GSE307534/GSM9226189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226190,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,58,female,extracted field,female,GSE307534:P10,P10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13441,18120,counts,pixel,6.250064752544415,platform_constant,True,H&E,6.250064752544415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226190,,,train,hesrt,samples/GSE307534/GSM9226190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226191,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,70,female,extracted field,female,GSE307534:P11,P11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10928,18120,counts,pixel,6.331667289007507,platform_constant,True,H&E,6.331667289007507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226191,,,train,hesrt,samples/GSE307534/GSM9226191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226192,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,70,female,extracted field,female,GSE307534:P11,P11,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11794,18120,counts,pixel,6.065134057157621,platform_constant,True,H&E,6.065134057157621,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226192,,,train,hesrt,samples/GSE307534/GSM9226192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226193,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,aged,age rule: bare number read as years,aged,74,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12427,18120,counts,um,1.0,verified,True,H&E,6.073792595659726,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226193,,,train,sda-all,samples/GSE307534/GSM9226193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226194,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE307534:P12,P12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,14177,18120,counts,pixel,6.164123857920178,platform_constant,True,H&E,6.164123857920178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226194,,,train,hesrt,samples/GSE307534/GSM9226194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226195,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,minimally invasive adenocarcinoma,MIA,aged,age rule: bare number read as years,aged,77,male,extracted field,male,GSE307534:P13,P13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13713,18120,counts,pixel,5.908915252999291,platform_constant,True,H&E,5.908915252999291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226195,,,train,hesrt,samples/GSE307534/GSM9226195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226196,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,77,male,extracted field,male,GSE307534:P13,P13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4880,18120,counts,pixel,4.437298150666556,platform_constant,True,H&E,4.437298150666556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226196,,,train,hesrt,samples/GSE307534/GSM9226196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226197,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,adult,age rule: bare number read as years,adult,53,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12335,18120,counts,um,1.0,verified,True,H&E,7.080463841856423,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226197,,,train,sda-all,samples/GSE307534/GSM9226197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226198,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,53,male,extracted field,male,GSE307534:P14,P14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11488,18120,counts,pixel,6.277023753145384,platform_constant,True,H&E,6.277023753145384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226198,,,train,hesrt,samples/GSE307534/GSM9226198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226199,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,minimally invasive adenocarcinoma,MIA,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE307534:P15,P15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13250,18120,counts,pixel,6.3371658444195,platform_constant,True,H&E,6.3371658444195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226199,,,train,hesrt,samples/GSE307534/GSM9226199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226200,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE307534:P15,P15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,14231,18120,counts,pixel,7.475420476987616,platform_constant,True,H&E,7.475420476987616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226200,,,train,hesrt,samples/GSE307534/GSM9226200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226201,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,aged,age rule: bare number read as years,aged,68,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13454,18120,counts,um,1.0,verified,True,H&E,6.486557174094152,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226201,,,train,sda-all,samples/GSE307534/GSM9226201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226202,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE307534:P16,P16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7736,18120,counts,pixel,6.601779429085135,platform_constant,True,H&E,6.601779429085135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226202,,,train,hesrt,samples/GSE307534/GSM9226202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9226203,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,,,aged,age rule: bare number read as years,aged,72,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18120,counts,um,1.0,verified,True,H&E,6.527022078176779,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226203,,,train,sda-all,samples/GSE307534/GSM9226203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226204,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,72,male,extracted field,male,GSE307534:P17,P17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13515,18120,counts,pixel,7.4994061857396845,platform_constant,True,H&E,7.4994061857396845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226204,,,train,hesrt,samples/GSE307534/GSM9226204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226205,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,minimally invasive adenocarcinoma,MIA,aged,age rule: bare number read as years,aged,77,female,extracted field,female,GSE307534:P18,P18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13006,18120,counts,pixel,6.564095601730838,platform_constant,True,H&E,6.564095601730838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226205,,,train,hesrt,samples/GSE307534/GSM9226205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226206,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,77,female,extracted field,female,GSE307534:P18,P18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11971,18120,counts,pixel,6.389858722339835,platform_constant,True,H&E,6.389858722339835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226206,,,train,hesrt,samples/GSE307534/GSM9226206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226207,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,76,male,extracted field,male,GSE307534:P19,P19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13899,18120,counts,pixel,6.568188705411009,platform_constant,True,H&E,6.568188705411009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226207,,,train,hesrt,samples/GSE307534/GSM9226207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226208,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,76,male,extracted field,male,GSE307534:P19,P19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12572,18120,counts,pixel,6.308217611125222,platform_constant,True,H&E,6.308217611125222,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226208,,,train,hesrt,samples/GSE307534/GSM9226208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226209,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P20,P20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12304,18120,counts,pixel,6.509076102423803,platform_constant,True,H&E,6.509076102423803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226209,,,train,hesrt,samples/GSE307534/GSM9226209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226210,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P20,P20,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13604,18120,counts,pixel,6.620290706786491,platform_constant,True,H&E,6.620290706786491,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226210,,,train,hesrt,samples/GSE307534/GSM9226210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226211,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,72,female,extracted field,female,GSE307534:P21,P21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13372,18120,counts,pixel,6.523257904939718,platform_constant,True,H&E,6.523257904939718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226211,,,train,hesrt,samples/GSE307534/GSM9226211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226212,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,72,female,extracted field,female,GSE307534:P21,P21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12926,18120,counts,pixel,6.181133783059006,platform_constant,True,H&E,6.181133783059006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226212,,,train,hesrt,samples/GSE307534/GSM9226212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226213,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,72,female,extracted field,female,GSE307534:P21,P21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13348,18120,counts,pixel,7.015892128199318,platform_constant,True,H&E,7.015892128199318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226213,,,train,hesrt,samples/GSE307534/GSM9226213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226214,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE307534:P22,P22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7943,18120,counts,pixel,5.8955538816704856,platform_constant,True,H&E,5.8955538816704856,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226214,,,train,hesrt,samples/GSE307534/GSM9226214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9226215,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE307534:P22,P22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12886,18120,counts,pixel,6.444209182175353,platform_constant,True,H&E,6.444209182175353,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226215,,,train,hesrt,samples/GSE307534/GSM9226215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9226216,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE307534:P22,P22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,12229,18120,counts,pixel,6.410607268086167,platform_constant,True,H&E,6.410607268086167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226216,,,train,hesrt,samples/GSE307534/GSM9226216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226217,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P23,P23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9996,18120,counts,pixel,6.318702684861457,platform_constant,True,H&E,6.318702684861457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226217,,,train,hesrt,samples/GSE307534/GSM9226217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226218,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,adenocarcinoma in situ,AIS,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P23,P23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10826,18120,counts,pixel,5.883695529773573,platform_constant,True,H&E,5.883695529773573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226218,,,train,hesrt,samples/GSE307534/GSM9226218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226219,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,74,male,extracted field,male,GSE307534:P23,P23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10894,18120,counts,pixel,5.984603806076194,platform_constant,True,H&E,5.984603806076194,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226219,,,train,hesrt,samples/GSE307534/GSM9226219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226220,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,adult,age rule: bare number read as years,adult,61,male,extracted field,male,GSE307534:P24,P24,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6738,18120,counts,pixel,6.002294770267733,platform_constant,True,H&E,6.002294770267733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226220,,,train,hesrt,samples/GSE307534/GSM9226220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226221,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,adult,age rule: bare number read as years,adult,61,male,extracted field,male,GSE307534:P24,P24,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,6276,18120,counts,pixel,5.894616971712669,platform_constant,True,H&E,5.894616971712669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226221,,,train,hesrt,samples/GSE307534/GSM9226221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226222,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0024276,glandular cell neoplasm,disease,luna,atypical adenomatous hyperplasia,AAH,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE307534:P25,P25,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9294,18120,counts,pixel,6.279320941461553,platform_constant,True,H&E,6.279320941461553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226222,,,train,hesrt,samples/GSE307534/GSM9226222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226223,GSE307534,GSE307534,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,LUAD,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE307534:P25,P25,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3791,18120,counts,pixel,5.002418152138142,platform_constant,True,H&E,5.002418152138142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226223,,,train,hesrt,samples/GSE307534/GSM9226223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227428,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4937,36601,counts,pixel,7.7786496904921245,platform_constant,True,H&E,7.7786496904921245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227428,,,train,hesrt,samples/GSE307586/GSM9227428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227429,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4861,36601,counts,pixel,7.778700379438586,platform_constant,True,H&E,7.778700379438586,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227429,,,train,hesrt,samples/GSE307586/GSM9227429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227430,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4989,36601,counts,pixel,7.7786496904921245,platform_constant,True,H&E,7.7786496904921245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227430,,,train,hesrt,samples/GSE307586/GSM9227430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227431,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,7.750719442821885,platform_constant,True,H&E,7.750719442821885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227431,,,train,hesrt,samples/GSE307586/GSM9227431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227432,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4221,36601,counts,pixel,5.014981708714281,platform_constant,True,H&E,5.014981708714281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227432,,,train,hesrt,samples/GSE307586/GSM9227432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227433,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4265,36601,counts,pixel,5.014981708714309,platform_constant,True,H&E,5.014981708714309,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227433,,,train,hesrt,samples/GSE307586/GSM9227433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9227434,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4188,36601,counts,pixel,5.014981708714252,platform_constant,True,H&E,5.014981708714252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227434,,,train,hesrt,samples/GSE307586/GSM9227434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227435,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4504,36601,counts,pixel,5.0149490292013885,platform_constant,True,H&E,5.0149490292013885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227435,,,train,hesrt,samples/GSE307586/GSM9227435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227436,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,4.9895310109386335,platform_constant,True,H&E,4.9895310109386335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227436,,,train,hesrt,samples/GSE307586/GSM9227436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227437,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4569,36601,counts,pixel,4.9895310109386335,platform_constant,True,H&E,4.9895310109386335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227437,,,train,hesrt,samples/GSE307586/GSM9227437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227438,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4980,36601,counts,pixel,4.9895310109386335,platform_constant,True,H&E,4.9895310109386335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227438,,,train,hesrt,samples/GSE307586/GSM9227438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227439,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4820,36601,counts,pixel,4.992296997930818,platform_constant,True,H&E,4.992296997930818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227439,,,train,hesrt,samples/GSE307586/GSM9227439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227440,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6423,Hs_Br6423,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4972,36601,counts,pixel,4.437476715100347,platform_constant,True,H&E,4.437476715100347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227440,,,train,hesrt,samples/GSE307586/GSM9227440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227441,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6423,Hs_Br6423,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4959,36601,counts,pixel,4.435198694809446,platform_constant,True,H&E,4.435198694809446,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227441,,,train,hesrt,samples/GSE307586/GSM9227441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227442,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4640,36601,counts,pixel,4.4351697933814265,platform_constant,True,H&E,4.4351697933814265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227442,,,train,hesrt,samples/GSE307586/GSM9227442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227443,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6423,Hs_Br6423,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,4.451268255297877,platform_constant,True,H&E,4.451268255297877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227443,,,train,hesrt,samples/GSE307586/GSM9227443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227444,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4393,36601,counts,pixel,4.562318950075365,platform_constant,True,H&E,4.562318950075365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227444,,,train,hesrt,samples/GSE307586/GSM9227444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227445,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4407,36601,counts,pixel,4.545848484551607,platform_constant,True,H&E,4.545848484551607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227445,,,train,hesrt,samples/GSE307586/GSM9227445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227446,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4400,36601,counts,pixel,4.545848484551631,platform_constant,True,H&E,4.545848484551631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227446,,,train,hesrt,samples/GSE307586/GSM9227446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227447,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4784,36601,counts,pixel,4.545848484551654,platform_constant,True,H&E,4.545848484551654,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227447,,,train,hesrt,samples/GSE307586/GSM9227447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227448,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4991,36601,counts,pixel,4.705776014582898,platform_constant,True,H&E,4.705776014582898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227448,,,train,hesrt,samples/GSE307586/GSM9227448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9227449,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4764,36601,counts,pixel,4.70577601458291,platform_constant,True,H&E,4.70577601458291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227449,,,train,hesrt,samples/GSE307586/GSM9227449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227450,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4988,36601,counts,pixel,4.705776014582898,platform_constant,True,H&E,4.705776014582898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227450,,,train,hesrt,samples/GSE307586/GSM9227450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227451,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4739,36601,counts,pixel,4.70577601458291,platform_constant,True,H&E,4.70577601458291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227451,,,train,hesrt,samples/GSE307586/GSM9227451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227452,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4733,36601,counts,pixel,5.441661197379996,platform_constant,True,H&E,5.441661197379996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227452,,,train,hesrt,samples/GSE307586/GSM9227452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227453,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4991,36601,counts,pixel,5.461377102785318,platform_constant,True,H&E,5.461377102785318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227453,,,train,hesrt,samples/GSE307586/GSM9227453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227454,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4452,36601,counts,pixel,5.441661197379996,platform_constant,True,H&E,5.441661197379996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227454,,,train,hesrt,samples/GSE307586/GSM9227454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227455,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,5.4416611973799975,platform_constant,True,H&E,5.4416611973799975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227455,,,train,hesrt,samples/GSE307586/GSM9227455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227456,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4402,36601,counts,pixel,4.952707593163473,platform_constant,True,H&E,4.952707593163473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227456,,,train,hesrt,samples/GSE307586/GSM9227456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227457,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4226,36601,counts,pixel,4.952707593163473,platform_constant,True,H&E,4.952707593163473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227457,,,train,hesrt,samples/GSE307586/GSM9227457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227458,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4188,36601,counts,pixel,4.9706521858923125,platform_constant,True,H&E,4.9706521858923125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227458,,,train,hesrt,samples/GSE307586/GSM9227458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227459,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4988,36601,counts,pixel,4.952707593163473,platform_constant,True,H&E,4.952707593163473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227459,,,train,hesrt,samples/GSE307586/GSM9227459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227460,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4903,36601,counts,pixel,5.405054462523279,platform_constant,True,H&E,5.405054462523279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227460,,,train,hesrt,samples/GSE307586/GSM9227460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227461,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4510,36601,counts,pixel,5.405054462523295,platform_constant,True,H&E,5.405054462523295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227461,,,train,hesrt,samples/GSE307586/GSM9227461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227462,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4464,36601,counts,pixel,5.424602387583212,platform_constant,True,H&E,5.424602387583212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227462,,,train,hesrt,samples/GSE307586/GSM9227462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227463,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4484,36601,counts,pixel,5.405054462523279,platform_constant,True,H&E,5.405054462523279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227463,,,train,hesrt,samples/GSE307586/GSM9227463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227464,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8667,Hs_Br8667,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4322,36601,counts,pixel,4.66639555470385,platform_constant,True,H&E,4.66639555470385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227464,,,train,hesrt,samples/GSE307586/GSM9227464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9227465,GSE307586,GSE307586,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,neurotypical control,not stated,luna,not stated,,unknown,not stated,,GSE307586:Hs_Br8667,Hs_Br8667,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4844,36601,counts,pixel,4.666395554703838,platform_constant,True,H&E,4.666395554703838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227465,,,train,hesrt,samples/GSE307586/GSM9227465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227486,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50133,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227486,,,train,sda-all,samples/GSE307588/GSM9227486,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227487,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27703,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227487,,,train,sda-all,samples/GSE307588/GSM9227487,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227488,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47045,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227488,,,train,sda-all,samples/GSE307588/GSM9227488,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227489,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,25481,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227489,,,train,sda-all,samples/GSE307588/GSM9227489,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9227490,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50978,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227490,,,train,sda-all,samples/GSE307588/GSM9227490,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227491,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,disease,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6904,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227491,,,train,sda-all,samples/GSE307588/GSM9227491,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227492,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,disease,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11571,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227492,,,train,sda-all,samples/GSE307588/GSM9227492,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9227493,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15368,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227493,,,train,sda-all,samples/GSE307588/GSM9227493,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227494,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59682,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227494,,,train,sda-all,samples/GSE307588/GSM9227494,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.52, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9227495,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,70475,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227495,,,train,sda-all,samples/GSE307588/GSM9227495,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.74, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227496,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22681,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227496,,,train,sda-all,samples/GSE307588/GSM9227496,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9227497,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61128,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227497,,,train,sda-all,samples/GSE307588/GSM9227497,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9227498,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51365,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227498,,,train,sda-all,samples/GSE307588/GSM9227498,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9227499,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9489,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227499,,,train,sda-all,samples/GSE307588/GSM9227499,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.68, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227500,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29010,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227500,,,train,sda-all,samples/GSE307588/GSM9227500,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9227501,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22955,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227501,,,train,sda-all,samples/GSE307588/GSM9227501,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9227502,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52145,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227502,,,train,sda-all,samples/GSE307588/GSM9227502,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9227503,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,disease,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38106,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227503,,,train,sda-all,samples/GSE307588/GSM9227503,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.68, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227504,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,disease,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4093,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227504,,,train,sda-all,samples/GSE307588/GSM9227504,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227505,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23034,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227505,,,train,sda-all,samples/GSE307588/GSM9227505,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227506,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,perturbation,luna,,Hypoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11994,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227506,,,train,sda-all,samples/GSE307588/GSM9227506,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227507,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27758,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227507,,,train,sda-all,samples/GSE307588/GSM9227507,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227508,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51637,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227508,,,train,sda-all,samples/GSE307588/GSM9227508,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.8, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227509,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52196,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227509,,,train,sda-all,samples/GSE307588/GSM9227509,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227510,GSE307588,GSE307588,Spatial profiling of hypoxic injury in human kidney organoids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0002113,kidney,kidney organoid,organoid,,,normal,luna,,Normoxia,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12626,380,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42613631,,GSM9227510,,,train,sda-all,samples/GSE307588/GSM9227510,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9228905,GSE307661,GSE307661,Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow trephine,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE307661:MM00075,MM00075,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,185674,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998580864898334,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9228905,,,test,sda-all,samples/GSE307661/GSM9228905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9228906,GSE307661,GSE307661,Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow trephine,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE307661:MM00075,MM00075,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35664,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9228906,,,test,sda-all,samples/GSE307661/GSM9228906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9228907,GSE307661,GSE307661,Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow trephine,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE307661:MM00263,MM00263,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,73464,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000089779005524,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9228907,,,test,sda-all,samples/GSE307661/GSM9228907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9229872,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,control (non-tumour bearing),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,150779,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229872,,,train,sda-all,samples/GSE307719/GSM9229872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9229873,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,metastasis,MONDO:0005070,neoplasm,disease,luna,,day 17 post-tumour inoculation (4T1Br4) mouse sample,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,161235,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229873,,,train,sda-all,samples/GSE307719/GSM9229873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9229874,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,metastasis,MONDO:0005070,neoplasm,disease,luna,,day 23 post-tumour inoculation (4T1Br4) mouse sample,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,140703,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229874,,,train,sda-all,samples/GSE307719/GSM9229874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9229875,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,disease,luna,,day 23 TBCP-1 bearing mouse,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,108757,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229875,,,train,sda-all,samples/GSE307719/GSM9229875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9229876,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,meninges,luna,UBERON:0002363,dura mater,Brain,primary tissue,,,normal,luna,,control (non-tumour bearing) mouse,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,620550,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229876,,,train,sda-all,samples/GSE307719/GSM9229876,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9229877,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,meninges,uberon_chain,UBERON:0002363,dura mater,Brain,metastasis,,,disease,luna,,day17 4T1Br4 bearing mice,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,702001,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229877,,,train,sda-all,samples/GSE307719/GSM9229877,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM9229878,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,control (non-tumour bearing) mouse,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,658179,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229878,,,train,sda-all,samples/GSE307719/GSM9229878,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9229879,GSE307719,GSE307719,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,meninges,uberon_chain,UBERON:0002363,dura mater,Brain,primary tissue,,,disease,luna,,day 23 4T1Br4 bearing mice,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,570198,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229879,,,train,sda-all,samples/GSE307719/GSM9229879,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.44, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",sample_kind;uberon,low_confidence_annotation
GSM9230200,GSE307744,GSE307744,Human bladder Visium spatial gene expression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder dome,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2813,38606,counts,um,1.0,verified,True,H&E-like (heuristic),3.9671993070303446,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9230200,,,train,sda-all,samples/GSE307744/GSM9230200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.35000000000000003, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231917,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1865,17943,counts,um,1.0,verified,True,H&E,4.161228656569482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231917,,,train,sda-all,samples/GSE307817/GSM9231917,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231918,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1373,17943,counts,um,1.0,verified,True,H&E,4.164228098503857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231918,,,train,sda-all,samples/GSE307817/GSM9231918,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231919,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,437,18085,counts,um,1.0,verified,True,H&E,6.709905157284522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231919,,,train,sda-all,samples/GSE307817/GSM9231919,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231920,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,977,18085,counts,um,1.0,verified,True,H&E,4.681758251060366,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231920,,,train,sda-all,samples/GSE307817/GSM9231920,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231921,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,531,18085,counts,um,1.0,verified,True,H&E,2.6416093722687055,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231921,,,train,sda-all,samples/GSE307817/GSM9231921,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231922,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1203,18085,counts,um,1.0,verified,True,H&E,3.4090359724508272,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231922,,,train,sda-all,samples/GSE307817/GSM9231922,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231923,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005300,chronic kidney disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1682,18085,counts,um,1.0,verified,True,H&E,2.653114304899212,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231923,,,train,sda-all,samples/GSE307817/GSM9231923,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.24, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231924,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1394,17943,counts,um,1.0,verified,True,H&E,4.176040421818985,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231924,,,train,sda-all,samples/GSE307817/GSM9231924,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231925,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1479,17943,counts,um,1.0,verified,True,H&E,4.167202113000326,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231925,,,train,sda-all,samples/GSE307817/GSM9231925,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231926,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4608,18085,counts,um,1.0,verified,True,H&E,4.9883713253136746,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231926,,,train,sda-all,samples/GSE307817/GSM9231926,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231927,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005240,kidney disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1929,18085,counts,um,1.0,verified,True,H&E,5.434761458276194,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231927,,,train,sda-all,samples/GSE307817/GSM9231927,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231928,GSE307817,GSE307817,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Kidney,primary tissue,MONDO:0005240;MONDO:0002908,kidney disorder;glucose metabolism disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4574,18085,counts,um,1.0,verified,True,H&E,5.192194202717311,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231928,,,train,sda-all,samples/GSE307817/GSM9231928,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232991,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4288,36601,counts,pixel,4.808962765507367,platform_constant,True,H&E,4.808962765507367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232991,,,train,hesrt,samples/GSE307866/GSM9232991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232992,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3486,36601,counts,pixel,4.806868380376575,platform_constant,True,H&E,4.806868380376575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232992,,,train,hesrt,samples/GSE307866/GSM9232992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232993,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3322,36601,counts,pixel,4.808840538894965,platform_constant,True,H&E,4.808840538894965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232993,,,train,hesrt,samples/GSE307866/GSM9232993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232994,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4254,36601,counts,pixel,4.810907190436752,platform_constant,True,H&E,4.810907190436752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232994,,,train,hesrt,samples/GSE307866/GSM9232994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232995,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3425,36601,counts,pixel,4.8385201120401335,platform_constant,True,H&E,4.8385201120401335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232995,,,train,hesrt,samples/GSE307866/GSM9232995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9232996,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4271,36601,counts,pixel,4.832198251899152,platform_constant,True,H&E,4.832198251899152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232996,,,train,hesrt,samples/GSE307866/GSM9232996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232997,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4539,36601,counts,pixel,5.160874690690052,platform_constant,True,H&E,5.160874690690052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232997,,,train,hesrt,samples/GSE307866/GSM9232997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232998,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3967,36601,counts,pixel,5.094139830580792,platform_constant,True,H&E,5.094139830580792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232998,,,train,hesrt,samples/GSE307866/GSM9232998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9232999,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3099,36601,counts,pixel,5.0940641381036045,platform_constant,True,H&E,5.0940641381036045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232999,,,train,hesrt,samples/GSE307866/GSM9232999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233000,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3482,36601,counts,pixel,5.094651772788411,platform_constant,True,H&E,5.094651772788411,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233000,,,train,hesrt,samples/GSE307866/GSM9233000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233001,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3185,36601,counts,pixel,5.09450101423569,platform_constant,True,H&E,5.09450101423569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233001,,,train,hesrt,samples/GSE307866/GSM9233001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233002,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4474,36601,counts,pixel,5.272949467625199,platform_constant,True,H&E,5.272949467625199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233002,,,train,hesrt,samples/GSE307866/GSM9233002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233003,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3298,36601,counts,pixel,5.275654117539013,platform_constant,True,H&E,5.275654117539013,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233003,,,train,hesrt,samples/GSE307866/GSM9233003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233004,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2880,36601,counts,pixel,5.2782188612315615,platform_constant,True,H&E,5.2782188612315615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233004,,,train,hesrt,samples/GSE307866/GSM9233004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233005,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3043,36601,counts,pixel,5.283137075548274,platform_constant,True,H&E,5.283137075548274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233005,,,train,hesrt,samples/GSE307866/GSM9233005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233006,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3796,36601,counts,pixel,4.934155788780548,platform_constant,True,H&E,4.934155788780548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233006,,,train,hesrt,samples/GSE307866/GSM9233006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233007,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3527,36601,counts,pixel,4.937846889128565,platform_constant,True,H&E,4.937846889128565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233007,,,train,hesrt,samples/GSE307866/GSM9233007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9233008,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3027,36601,counts,pixel,4.9327783346117995,platform_constant,True,H&E,4.9327783346117995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233008,,,train,hesrt,samples/GSE307866/GSM9233008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233009,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3755,36601,counts,pixel,4.934639360363995,platform_constant,True,H&E,4.934639360363995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233009,,,train,hesrt,samples/GSE307866/GSM9233009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233010,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4056,36601,counts,pixel,4.812995669656054,platform_constant,True,H&E,4.812995669656054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233010,,,train,hesrt,samples/GSE307866/GSM9233010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233011,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3640,36601,counts,pixel,4.814508403322837,platform_constant,True,H&E,4.814508403322837,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233011,,,train,hesrt,samples/GSE307866/GSM9233011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233012,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3790,36601,counts,pixel,4.804903468637043,platform_constant,True,H&E,4.804903468637043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233012,,,train,hesrt,samples/GSE307866/GSM9233012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233013,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2456,36601,counts,pixel,4.810791131450389,platform_constant,True,H&E,4.810791131450389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233013,,,train,hesrt,samples/GSE307866/GSM9233013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233014,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3128,36601,counts,pixel,4.875094504257718,platform_constant,True,H&E,4.875094504257718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233014,,,train,hesrt,samples/GSE307866/GSM9233014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233015,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3040,36601,counts,pixel,4.880555452588563,platform_constant,True,H&E,4.880555452588563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233015,,,train,hesrt,samples/GSE307866/GSM9233015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233016,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3555,36601,counts,pixel,4.876486490507056,platform_constant,True,H&E,4.876486490507056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233016,,,train,hesrt,samples/GSE307866/GSM9233016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233017,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3026,36601,counts,pixel,4.876377526120111,platform_constant,True,H&E,4.876377526120111,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233017,,,train,hesrt,samples/GSE307866/GSM9233017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233018,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3681,36601,counts,pixel,4.833579786880013,platform_constant,True,H&E,4.833579786880013,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233018,,,train,hesrt,samples/GSE307866/GSM9233018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233019,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3596,36601,counts,pixel,4.829251537760302,platform_constant,True,H&E,4.829251537760302,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233019,,,train,hesrt,samples/GSE307866/GSM9233019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233020,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2771,36601,counts,pixel,4.827465310855587,platform_constant,True,H&E,4.827465310855587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233020,,,train,hesrt,samples/GSE307866/GSM9233020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233021,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3452,36601,counts,pixel,4.8290942041459735,platform_constant,True,H&E,4.8290942041459735,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233021,,,train,hesrt,samples/GSE307866/GSM9233021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233022,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3868,36601,counts,pixel,4.782340455651674,platform_constant,True,H&E,4.782340455651674,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233022,,,train,hesrt,samples/GSE307866/GSM9233022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233023,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3106,36601,counts,pixel,4.779491488247325,platform_constant,True,H&E,4.779491488247325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233023,,,train,hesrt,samples/GSE307866/GSM9233023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233024,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2450,36601,counts,pixel,4.786067044148819,platform_constant,True,H&E,4.786067044148819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233024,,,train,hesrt,samples/GSE307866/GSM9233024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233025,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3165,36601,counts,pixel,4.7894422863530615,platform_constant,True,H&E,4.7894422863530615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233025,,,train,hesrt,samples/GSE307866/GSM9233025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233026,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3035,36601,counts,pixel,4.89383072645857,platform_constant,True,H&E,4.89383072645857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233026,,,train,hesrt,samples/GSE307866/GSM9233026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233027,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3060,36601,counts,pixel,4.89322930322115,platform_constant,True,H&E,4.89322930322115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233027,,,train,hesrt,samples/GSE307866/GSM9233027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233028,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3448,36601,counts,pixel,4.888201640643063,platform_constant,True,H&E,4.888201640643063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233028,,,train,hesrt,samples/GSE307866/GSM9233028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233029,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3584,36601,counts,pixel,4.893608747811377,platform_constant,True,H&E,4.893608747811377,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233029,,,train,hesrt,samples/GSE307866/GSM9233029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9233030,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3477,36601,counts,pixel,4.703964825997944,platform_constant,True,H&E,4.703964825997944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233030,,,train,hesrt,samples/GSE307866/GSM9233030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233031,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3670,36601,counts,pixel,4.709098678295646,platform_constant,True,H&E,4.709098678295646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233031,,,train,hesrt,samples/GSE307866/GSM9233031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233032,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3642,36601,counts,pixel,4.701176595399419,platform_constant,True,H&E,4.701176595399419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233032,,,train,hesrt,samples/GSE307866/GSM9233032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233033,GSE307866,GSE307866,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000988,pons,pons,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3880,36601,counts,pixel,4.709005541093422,platform_constant,True,H&E,4.709005541093422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233033,,,train,hesrt,samples/GSE307866/GSM9233033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233658,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531429760,531429760,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,16149,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233658,,,train,sda-all,samples/GSE307895/GSM9233658,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9233659,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531421966,531421966,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,23709,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233659,,,train,sda-all,samples/GSE307895/GSM9233659,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9233660,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531420669,531420669,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,8910,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233660,,,train,sda-all,samples/GSE307895/GSM9233660,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.81, ""life_stage"": 0.99}",,
GSM9233661,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005316,bacterial vaginosis,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531416663,531416663,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,22798,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233661,,,train,sda-all,samples/GSE307895/GSM9233661,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9233662,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005316,bacterial vaginosis,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531414167,531414167,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,14449,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233662,,,train,sda-all,samples/GSE307895/GSM9233662,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233663,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005316,bacterial vaginosis,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531412668,531412668,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,12665,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233663,,,train,sda-all,samples/GSE307895/GSM9233663,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233664,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005316,bacterial vaginosis,disease,mondo_predicate,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531412668,531412668,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,10752,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233664,,,train,sda-all,samples/GSE307895/GSM9233664,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9233666,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005770,genital herpes,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531419765,531419765,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,10947,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233666,,,train,sda-all,samples/GSE307895/GSM9233666,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233667,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005770,genital herpes,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531438865,531438865,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,3260,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233667,,,train,sda-all,samples/GSE307895/GSM9233667,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9233668,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005316;MONDO:0005770,bacterial vaginosis;genital herpes,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531425664,531425664,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,1709,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233668,,,train,sda-all,samples/GSE307895/GSM9233668,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9233669,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005316;MONDO:0005770,bacterial vaginosis;genital herpes,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531425664,531425664,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,2669,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233669,,,train,sda-all,samples/GSE307895/GSM9233669,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9233670,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005770,genital herpes,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531415064,531415064,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,20117,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233670,,,train,sda-all,samples/GSE307895/GSM9233670,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233671,GSE307895,GSE307895,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Vaginal tract biopsy,primary tissue,MONDO:0005770,genital herpes,disease,luna,,,not stated,luna,not stated,,female,extracted field,Female,GSE307895:531412364,531412364,fresh frozen,fresh-frozen,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,36234,541,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41252205,,GSM9233671,,,train,sda-all,samples/GSE307895/GSM9233671,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9234585,GSE307951,GSE307951,Ribosomal heterogeneity revealed by a spatial transcriptomics in the water fern Ceratopteris richardii,Ceratopteris richardii,49495,,Ceratopteris richardii,49495,,False,False,GEO organism field,Ceratopteris richardii,,plant,luna,,,shoot tips,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,18863,36813,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41635689,,GSM9234585,,,train,sda-all,samples/GSE307951/GSM9234585,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9235031,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4872,36601,counts,pixel,4.869675086746545,platform_constant,True,H&E,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235031,,,train,hesrt,samples/GSE307990/GSM9235031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235032,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4820,36601,counts,pixel,4.869675086746545,platform_constant,True,H&E,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235032,,,train,hesrt,samples/GSE307990/GSM9235032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235033,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3560,36601,counts,pixel,4.869675086746545,platform_constant,True,H&E,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235033,,,train,hesrt,samples/GSE307990/GSM9235033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235034,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4843,36601,counts,pixel,4.869675086746545,platform_constant,True,H&E,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235034,,,train,hesrt,samples/GSE307990/GSM9235034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235035,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4031,36601,counts,pixel,5.053609776508507,platform_constant,True,H&E,5.053609776508507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235035,,,train,hesrt,samples/GSE307990/GSM9235035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235036,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4880,36601,counts,pixel,5.053609776508507,platform_constant,True,H&E,5.053609776508507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235036,,,train,hesrt,samples/GSE307990/GSM9235036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235037,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3580,36601,counts,pixel,5.053609776508507,platform_constant,True,H&E,5.053609776508507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235037,,,train,hesrt,samples/GSE307990/GSM9235037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235038,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3663,36601,counts,pixel,5.053609776508479,platform_constant,True,H&E,5.053609776508479,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235038,,,train,hesrt,samples/GSE307990/GSM9235038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235039,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4335,36601,counts,pixel,5.257581435453031,platform_constant,True,H&E,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235039,,,train,hesrt,samples/GSE307990/GSM9235039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235040,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4601,36601,counts,pixel,5.257581435453031,platform_constant,True,H&E,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235040,,,train,hesrt,samples/GSE307990/GSM9235040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235041,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4700,36601,counts,pixel,5.257581435453031,platform_constant,True,H&E,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235041,,,train,hesrt,samples/GSE307990/GSM9235041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235042,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4583,36601,counts,pixel,5.257581435453031,platform_constant,True,H&E,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235042,,,train,hesrt,samples/GSE307990/GSM9235042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235043,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3647,36601,counts,pixel,5.156498318830742,platform_constant,True,H&E,5.156498318830742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235043,,,train,hesrt,samples/GSE307990/GSM9235043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235044,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4214,36601,counts,pixel,5.156498318830742,platform_constant,True,H&E,5.156498318830742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235044,,,train,hesrt,samples/GSE307990/GSM9235044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235045,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3231,36601,counts,pixel,5.156498318830742,platform_constant,True,H&E,5.156498318830742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235045,,,train,hesrt,samples/GSE307990/GSM9235045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235046,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3851,36601,counts,pixel,4.992237791612399,platform_constant,True,H&E,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235046,,,train,hesrt,samples/GSE307990/GSM9235046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235047,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3082,36601,counts,pixel,4.992237791612399,platform_constant,True,H&E,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235047,,,train,hesrt,samples/GSE307990/GSM9235047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235048,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3406,36601,counts,pixel,4.992237791612399,platform_constant,True,H&E,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235048,,,train,hesrt,samples/GSE307990/GSM9235048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235049,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2843,36601,counts,pixel,4.992237791612399,platform_constant,True,H&E,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235049,,,train,hesrt,samples/GSE307990/GSM9235049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235050,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3989,36601,counts,pixel,4.952887996883904,platform_constant,True,H&E,4.952887996883904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235050,,,train,hesrt,samples/GSE307990/GSM9235050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235051,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4840,36601,counts,pixel,4.9528879968838755,platform_constant,True,H&E,4.9528879968838755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235051,,,train,hesrt,samples/GSE307990/GSM9235051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235052,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3754,36601,counts,pixel,4.952887996883904,platform_constant,True,H&E,4.952887996883904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235052,,,train,hesrt,samples/GSE307990/GSM9235052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235053,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4059,36601,counts,pixel,4.95288799688389,platform_constant,True,H&E,4.95288799688389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235053,,,train,hesrt,samples/GSE307990/GSM9235053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235054,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4677,36601,counts,pixel,4.864621121051455,platform_constant,True,H&E,4.864621121051455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235054,,,train,hesrt,samples/GSE307990/GSM9235054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235055,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3919,36601,counts,pixel,4.4604696291893,platform_constant,True,H&E,4.4604696291893,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235055,,,train,hesrt,samples/GSE307990/GSM9235055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235056,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3534,36601,counts,pixel,4.662635269839129,platform_constant,True,H&E,4.662635269839129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235056,,,train,hesrt,samples/GSE307990/GSM9235056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235057,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4057,36601,counts,pixel,4.662635269839129,platform_constant,True,H&E,4.662635269839129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235057,,,train,hesrt,samples/GSE307990/GSM9235057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235058,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2396,36601,counts,pixel,4.829241670274997,platform_constant,True,H&E,4.829241670274997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235058,,,train,hesrt,samples/GSE307990/GSM9235058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235059,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3865,36601,counts,pixel,4.829241670275024,platform_constant,True,H&E,4.829241670275024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235059,,,train,hesrt,samples/GSE307990/GSM9235059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235060,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2728,36601,counts,pixel,4.831918799570896,platform_constant,True,H&E,4.831918799570896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235060,,,train,hesrt,samples/GSE307990/GSM9235060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235061,GSE307990,GSE307990,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002728,entorhinal cortex,entorhinal cortex (ERC),primary tissue,MONDO:0004975,Alzheimer disease,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4186,36601,counts,pixel,4.82924167027501,platform_constant,True,H&E,4.82924167027501,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235061,,,train,hesrt,samples/GSE307990/GSM9235061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9238726,GSE308146,GSE308146,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,mixed,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,265308,1000,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41266321,,GSM9238726,,,train,sda-all,samples/GSE308146/GSM9238726,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9238727,GSE308146,GSE308146,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,mixed,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,254503,1000,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41266321,,GSM9238727,,,train,sda-all,samples/GSE308146/GSM9238727,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9238728,GSE308146,GSE308146,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,mixed,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,248044,1000,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41266321,,GSM9238728,,,train,sda-all,samples/GSE308146/GSM9238728,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9238729,GSE308146,GSE308146,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,mixed,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,178453,1000,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41266321,,GSM9238729,,,train,sda-all,samples/GSE308146/GSM9238729,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9238731,GSE308147,GSE308147,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - MERSCOPE Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,179248,285,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,41266321,,GSM9238731,,,train,sda-all,samples/GSE308147/GSM9238731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9238735,GSE308147,GSE308147,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - MERSCOPE Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,340026,285,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,41266321,,GSM9238735,,,train,sda-all,samples/GSE308147/GSM9238735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9238736,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,tumor,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,375845,540,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41266321,,GSM9238736,,,train,sda-all,samples/GSE308148/GSM9238736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9238737,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,tumor,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,346630,539,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000006892368769,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238737,,,train,sda-all,samples/GSE308148/GSM9238737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9238738,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,tumor,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,410622,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238738,,,train,sda-all,samples/GSE308148/GSM9238738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9238739,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,tumor,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,395955,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238739,,,train,sda-all,samples/GSE308148/GSM9238739,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9238740,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,tumor,tumour tissue,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,395341,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238740,,,train,sda-all,samples/GSE308148/GSM9238740,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9238741,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,normal tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,301975,538,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000055537924467,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238741,,,train,sda-all,samples/GSE308148/GSM9238741,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 0.97}",,
GSM9238742,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,normal tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,251298,520,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999363665287944,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238742,,,train,sda-all,samples/GSE308148/GSM9238742,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9238743,GSE308148,GSE308148,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,normal tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,291023,534,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999922472606988,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238743,,,train,sda-all,samples/GSE308148/GSM9238743,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9239732,GSE308167,GSE308167,Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,other,10255,9742,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41540123,,GSM9239732,,,train,sda-all,samples/GSE308167/GSM9239732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9239733,GSE308167,GSE308167,Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node (lymphoma),tumour tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,other,5972,9699,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41540123,,GSM9239733,,,train,sda-all,samples/GSE308167/GSM9239733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9239734,GSE308167,GSE308167,Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lymph node,luna,UBERON:0000029,lymph node,Lymph node (lymphoma),tumour tissue,MONDO:0004948;MONDO:0018905,B-cell chronic lymphocytic leukemia;diffuse large B-cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,other,4547,9329,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,41540123,,GSM9239734,,,train,sda-all,samples/GSE308167/GSM9239734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9241214,GSE308260,GSE308260,Spatial transcriptomics for intrathoracic adhesion in mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,Saline-based talc solution was administered into the left thoracic cavity.,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2042,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.94384056711138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42230567,,GSM9241214,,,train,sda-all,samples/GSE308260/GSM9241214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9241521,GSE308275,GSE308275,Integrated single-cell and spatial transcriptomics of ovarian immune landscape reveal role of distinct macrophages in classic galactosemia associated with premature ovarian insufficiency,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1785,18085,counts,um,1.0,verified,True,H&E,4.6644411731959305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42226209,,GSM9241521,,,train,sda-all,samples/GSE308275/GSM9241521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9241523,GSE308275,GSE308275,Integrated single-cell and spatial transcriptomics of ovarian immune landscape reveal role of distinct macrophages in classic galactosemia associated with premature ovarian insufficiency,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1660,18085,counts,um,1.0,verified,True,H&E,7.0154489088096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42226209,,GSM9241523,,,train,sda-all,samples/GSE308275/GSM9241523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9246570,GSE308486,GSE308486,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostatic ductal adenocarcinoma (PDA),tumour tissue,MONDO:0004970,adenocarcinoma,disease,luna,,PDA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1621,18085,counts,pixel,4.364271848160558,platform_constant,True,H&E,4.364271848160558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246570,,,train,hesrt,samples/GSE308486/GSM9246570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9246575,GSE308486,GSE308486,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostatic ductal adenocarcinoma (PDA),tumour tissue,MONDO:0004970,adenocarcinoma,disease,luna,,PDA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2119,18085,counts,pixel,12.375133858520606,platform_constant,True,H&E,12.375133858520606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246575,,,train,hesrt,samples/GSE308486/GSM9246575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9246578,GSE308486,GSE308486,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Prostatic ductal adenocarcinoma (PDA),tumour tissue,MONDO:0004970,adenocarcinoma,disease,luna,,PDA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3259,18085,counts,pixel,6.838148931901622,platform_constant,True,H&E,6.838148931901622,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246578,,,train,hesrt,samples/GSE308486/GSM9246578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9246579,GSE308486,GSE308486,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,,,Non-Prostatic ductal adenocarcinoma (PDA),tumour tissue,MONDO:0004970,adenocarcinoma,disease,luna,,non-PDA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2671,18085,counts,pixel,6.851260953060688,platform_constant,True,H&E,6.851260953060688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246579,,,train,hesrt,samples/GSE308486/GSM9246579,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.85, ""uberon"": 0.24, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9246580,GSE308486,GSE308486,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,UBERON:0002367,prostate gland,Non-Prostatic ductal adenocarcinoma (PDA),tumour tissue,MONDO:0004970,adenocarcinoma,disease,luna,,non-PDA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2620,18085,counts,pixel,7.866900411186507,platform_constant,True,H&E,7.866900411186507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246580,,,train,hesrt,samples/GSE308486/GSM9246580,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.16, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9246581,GSE308486,GSE308486,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,prostate,luna,,,Non-Prostatic ductal adenocarcinoma (PDA),tumour tissue,MONDO:0004970,adenocarcinoma,disease,luna,,non-PDA,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4536,18085,counts,pixel,6.844879429189247,platform_constant,True,H&E,6.844879429189247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246581,,,train,hesrt,samples/GSE308486/GSM9246581,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.8300000000000001, ""uberon"": 0.27, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9247060,GSE308507,GSE308507,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001153,caecum,Cecum,primary tissue,,,normal,luna,,C57BL/6,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,spot,1410192,56973,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247060,,,train,sda-all,samples/GSE308507/GSM9247060,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247061,GSE308507,GSE308507,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Distal Colon,primary tissue,,,normal,luna,,C57BL/6,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,spot,924006,56973,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247061,,,train,sda-all,samples/GSE308507/GSM9247061,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9247062,GSE308507,GSE308507,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Proximal Colon,primary tissue,,,normal,luna,,C57BL/6,adult,age rule: age with unit,adult,13 weeks,female,extracted field,F,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,spot,820236,56973,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247062,,,train,sda-all,samples/GSE308507/GSM9247062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9247063,GSE308507,GSE308507,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,normal,luna,,C57BL/6,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,spot,1400722,56973,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247063,,,train,sda-all,samples/GSE308507/GSM9247063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247064,GSE308507,GSE308507,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002108,small intestine,Proximal Small Intestine,primary tissue,,,normal,luna,,C57BL/6,adult,age rule: age with unit,adult,13 weeks,male,extracted field,M,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,spot,1627312,56973,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247064,,,train,sda-all,samples/GSE308507/GSM9247064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9247574,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,6496,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247574,,,train,sda-all,samples/GSE308623/GSM9247574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247575,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,25634,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247575,,,train,sda-all,samples/GSE308623/GSM9247575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247576,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,6875,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247576,,,train,sda-all,samples/GSE308623/GSM9247576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247577,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,6331,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247577,,,train,sda-all,samples/GSE308623/GSM9247577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247578,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,7131,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247578,,,train,sda-all,samples/GSE308623/GSM9247578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247579,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,28466,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247579,,,train,sda-all,samples/GSE308623/GSM9247579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247580,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,7122,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247580,,,train,sda-all,samples/GSE308623/GSM9247580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247581,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,7794,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247581,,,train,sda-all,samples/GSE308623/GSM9247581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247582,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,28545,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247582,,,train,sda-all,samples/GSE308623/GSM9247582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247583,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,9426,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247583,,,train,sda-all,samples/GSE308623/GSM9247583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247584,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,29432,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247584,,,train,sda-all,samples/GSE308623/GSM9247584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247585,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,7447,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247585,,,train,sda-all,samples/GSE308623/GSM9247585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247586,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,41289,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247586,,,train,sda-all,samples/GSE308623/GSM9247586,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247587,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,5845,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247587,,,train,sda-all,samples/GSE308623/GSM9247587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247588,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8988,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247588,,,train,sda-all,samples/GSE308623/GSM9247588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9247589,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,34448,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247589,,,train,sda-all,samples/GSE308623/GSM9247589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9247590,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,9611,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247590,,,train,sda-all,samples/GSE308623/GSM9247590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9247591,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8736,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247591,,,train,sda-all,samples/GSE308623/GSM9247591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247592,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8169,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247592,,,train,sda-all,samples/GSE308623/GSM9247592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247593,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8180,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247593,,,train,sda-all,samples/GSE308623/GSM9247593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9247594,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8928,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247594,,,train,sda-all,samples/GSE308623/GSM9247594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247595,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8485,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247595,,,train,sda-all,samples/GSE308623/GSM9247595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9247596,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8258,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247596,,,train,sda-all,samples/GSE308623/GSM9247596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247597,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8220,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247597,,,train,sda-all,samples/GSE308623/GSM9247597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247598,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,8653,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247598,,,train,sda-all,samples/GSE308623/GSM9247598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247599,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,6299,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247599,,,train,sda-all,samples/GSE308623/GSM9247599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9247600,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,9405,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247600,,,train,sda-all,samples/GSE308623/GSM9247600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9247601,GSE308623,GSE308623,Spatial dynamics of brain development and neuroinflammation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,ST (legacy),release v3,ST (legacy),sequencing-based,Spatial Transcriptomics,,,spot,9403,32285,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41193846,,GSM9247601,,,train,sda-all,samples/GSE308623/GSM9247601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9249289,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,58,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7083,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249289,,,train,sda-all,samples/GSE308624/GSM9249289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249290,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,48,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6677,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249290,,,train,sda-all,samples/GSE308624/GSM9249290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249291,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,78,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6309,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249291,,,train,sda-all,samples/GSE308624/GSM9249291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249292,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,75,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6174,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249292,,,train,sda-all,samples/GSE308624/GSM9249292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249293,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,78,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6058,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249293,,,train,sda-all,samples/GSE308624/GSM9249293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249294,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,58,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5808,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249294,,,train,sda-all,samples/GSE308624/GSM9249294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249295,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,69,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5664,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249295,,,train,sda-all,samples/GSE308624/GSM9249295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249296,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,43,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5436,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249296,,,train,sda-all,samples/GSE308624/GSM9249296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9249297,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,68,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5408,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249297,,,train,sda-all,samples/GSE308624/GSM9249297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249298,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,79,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5328,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249298,,,train,sda-all,samples/GSE308624/GSM9249298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249299,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,55,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5127,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249299,,,train,sda-all,samples/GSE308624/GSM9249299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249300,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,75,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4435,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249300,,,train,sda-all,samples/GSE308624/GSM9249300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249301,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,42,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4375,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249301,,,train,sda-all,samples/GSE308624/GSM9249301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249302,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,77,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4219,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249302,,,train,sda-all,samples/GSE308624/GSM9249302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249303,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,58,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3931,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249303,,,train,sda-all,samples/GSE308624/GSM9249303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9249304,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,50,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3889,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249304,,,train,sda-all,samples/GSE308624/GSM9249304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249305,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,72,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3783,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249305,,,train,sda-all,samples/GSE308624/GSM9249305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249306,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,65,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3754,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249306,,,train,sda-all,samples/GSE308624/GSM9249306,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249307,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,59,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3730,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249307,,,train,sda-all,samples/GSE308624/GSM9249307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9249308,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,67,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3552,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249308,,,train,sda-all,samples/GSE308624/GSM9249308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249309,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,67,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3533,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249309,,,train,sda-all,samples/GSE308624/GSM9249309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9249310,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,69,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3512,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249310,,,train,sda-all,samples/GSE308624/GSM9249310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9249311,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,71,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3456,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249311,,,train,sda-all,samples/GSE308624/GSM9249311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249312,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,77,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3241,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249312,,,train,sda-all,samples/GSE308624/GSM9249312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249313,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,52,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3200,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249313,,,train,sda-all,samples/GSE308624/GSM9249313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249314,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,54,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3192,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249314,,,train,sda-all,samples/GSE308624/GSM9249314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249315,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,72,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3176,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249315,,,train,sda-all,samples/GSE308624/GSM9249315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249316,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,64,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3141,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249316,,,train,sda-all,samples/GSE308624/GSM9249316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249317,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,80,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3122,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249317,,,train,sda-all,samples/GSE308624/GSM9249317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249318,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,57,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3116,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249318,,,train,sda-all,samples/GSE308624/GSM9249318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249319,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,88,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3031,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249319,,,train,sda-all,samples/GSE308624/GSM9249319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249320,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,86,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3026,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249320,,,train,sda-all,samples/GSE308624/GSM9249320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249321,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,78,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3021,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249321,,,train,sda-all,samples/GSE308624/GSM9249321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249322,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,65,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2950,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249322,,,train,sda-all,samples/GSE308624/GSM9249322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249323,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,79,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2810,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249323,,,train,sda-all,samples/GSE308624/GSM9249323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249324,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,75,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2762,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249324,,,train,sda-all,samples/GSE308624/GSM9249324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249325,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,84,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2488,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249325,,,train,sda-all,samples/GSE308624/GSM9249325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249326,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,74,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2441,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249326,,,train,sda-all,samples/GSE308624/GSM9249326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249327,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,54,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2390,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249327,,,train,sda-all,samples/GSE308624/GSM9249327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249328,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,62,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2384,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249328,,,train,sda-all,samples/GSE308624/GSM9249328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9249329,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,54,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2312,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249329,,,train,sda-all,samples/GSE308624/GSM9249329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249330,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,84,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2304,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249330,,,train,sda-all,samples/GSE308624/GSM9249330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249331,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,73,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2157,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249331,,,train,sda-all,samples/GSE308624/GSM9249331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9249332,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,72,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2014,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249332,,,train,sda-all,samples/GSE308624/GSM9249332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249333,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,53,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1993,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249333,,,train,sda-all,samples/GSE308624/GSM9249333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249334,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,74,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1982,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249334,,,train,sda-all,samples/GSE308624/GSM9249334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9249335,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,80,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1924,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249335,,,train,sda-all,samples/GSE308624/GSM9249335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249336,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,56,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1846,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249336,,,train,sda-all,samples/GSE308624/GSM9249336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249337,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,56,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1737,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249337,,,train,sda-all,samples/GSE308624/GSM9249337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249338,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,58,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1694,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249338,,,train,sda-all,samples/GSE308624/GSM9249338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249339,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,73,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1483,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249339,,,train,sda-all,samples/GSE308624/GSM9249339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249340,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,82,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1447,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249340,,,train,sda-all,samples/GSE308624/GSM9249340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249341,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,77,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1366,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249341,,,train,sda-all,samples/GSE308624/GSM9249341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249342,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,46,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1339,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249342,,,train,sda-all,samples/GSE308624/GSM9249342,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.51, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249343,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,64,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1329,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249343,,,train,sda-all,samples/GSE308624/GSM9249343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9249344,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,83,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1312,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249344,,,train,sda-all,samples/GSE308624/GSM9249344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249345,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,35,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1267,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249345,,,train,sda-all,samples/GSE308624/GSM9249345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9249346,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,83,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1126,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249346,,,train,sda-all,samples/GSE308624/GSM9249346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249347,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,63,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1107,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249347,,,train,sda-all,samples/GSE308624/GSM9249347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249348,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,68,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1070,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249348,,,train,sda-all,samples/GSE308624/GSM9249348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.91}",,
GSM9249349,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,63,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1045,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249349,,,train,sda-all,samples/GSE308624/GSM9249349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249350,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,61,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1029,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249350,,,train,sda-all,samples/GSE308624/GSM9249350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249351,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,75,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1007,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249351,,,train,sda-all,samples/GSE308624/GSM9249351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249352,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,82,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,797,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249352,,,train,sda-all,samples/GSE308624/GSM9249352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249353,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,87,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,699,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249353,,,train,sda-all,samples/GSE308624/GSM9249353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249354,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,73,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,580,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249354,,,train,sda-all,samples/GSE308624/GSM9249354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249355,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,62,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,547,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249355,,,train,sda-all,samples/GSE308624/GSM9249355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249356,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,71,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,406,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249356,,,train,sda-all,samples/GSE308624/GSM9249356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249357,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,77,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,228,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249357,,,train,sda-all,samples/GSE308624/GSM9249357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249358,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,aged,age rule: bare number read as years,aged,82,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,202,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249358,,,train,sda-all,samples/GSE308624/GSM9249358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249359,GSE308624,GSE308624,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,stomach,luna,UBERON:0000945,stomach,gastric cancer,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,adult,age rule: bare number read as years,adult,42,unknown,not stated,2,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,101,1000,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41194113,,GSM9249359,,,train,sda-all,samples/GSE308624/GSM9249359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9251639,GSE308697,GSE308697,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20879,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998709477596526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251639,,,train,sda-all,samples/GSE308697/GSM9251639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9251640,GSE308697,GSE308697,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13841,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251640,,,train,sda-all,samples/GSE308697/GSM9251640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9251641,GSE308697,GSE308697,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8629,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999655615759026,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251641,,,train,sda-all,samples/GSE308697/GSM9251641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9251642,GSE308697,GSE308697,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8409,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000171703296703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251642,,,train,sda-all,samples/GSE308697/GSM9251642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9251661,GSE308699,GSE308699,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004992,cancer,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21943,494,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000140457744396,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251661,,,train,sda-all,samples/GSE308699/GSM9251661,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.42, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9251662,GSE308699,GSE308699,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Retroperitoneal,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,25228,499,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999931072511718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251662,,,train,sda-all,samples/GSE308699/GSM9251662,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.87, ""disease_status"": 0.59, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9251663,GSE308699,GSE308699,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,bone,luna,UBERON:0001474,bone element,Bone,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5300,422,counts,um,1.0,verified,True,fluorescence: DAPI,0.499997941370224,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251663,,,train,sda-all,samples/GSE308699/GSM9251663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.31, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9251664,GSE308699,GSE308699,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56993,499,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999821200030114,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251664,,,train,sda-all,samples/GSE308699/GSM9251664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9251665,GSE308699,GSE308699,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,metastasis,MONDO:0005575,colorectal cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7414,422,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998504784689,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251665,,,train,sda-all,samples/GSE308699/GSM9251665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9256395,GSE308929,GSE308929,An Integrated Transcriptomics Atlas of Healthy Human Skin Focusing on the Pilosebaceous Unit,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0011932,pilosebaceous unit,Skin,primary tissue,,,normal,luna,Healthy,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,284341,18085,counts,um,1.0,verified,True,H&E,1.2772974850995897,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9256395,,,train,sda-all,samples/GSE308929/GSM9256395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9256396,GSE308929,GSE308929,An Integrated Transcriptomics Atlas of Healthy Human Skin Focusing on the Pilosebaceous Unit,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0011932,pilosebaceous unit,Skin,primary tissue,,,normal,luna,Healthy,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,269006,18085,counts,um,1.0,verified,True,H&E,1.0742431304774083,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9256396,,,train,sda-all,samples/GSE308929/GSM9256396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9256713,GSE308952,GSE308952,Peripheral glia constitute a pro-reparative niche triggering skin wound healing [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Regenerating skin wound,primary tissue,,,perturbation,luna,,Tmx intraperitoneal,adult,luna,adult,,female,sample text,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,68159,46499,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41512873,,GSM9256713,,,train,sda-all,samples/GSE308952/GSM9256713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9256795,GSE308959,GSE308959,The origin of hepatocellular carcinoma is regulated by metabolic zonation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0007256,hepatocellular carcinoma,disease,mondo_predicate (Luna: perturbation),,Gls2-CreERT2; Ctnnb1(ex3)fl/+; Arid2fl/+; Rosa26LSL-tdTomato/+,juvenile,luna,juvenile,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,162483,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999974125439868,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41196951,,GSM9256795,,,train,sda-all,samples/GSE308959/GSM9256795,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.81, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.24}",disease_status;life_stage,low_confidence_annotation
GSM9256796,GSE308959,GSE308959,The origin of hepatocellular carcinoma is regulated by metabolic zonation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0007256,hepatocellular carcinoma,disease,mondo_predicate (Luna: perturbation),,Cyp1a2-CreERT2; Ctnnb1(ex3)fl/+; Arid2fl/+; Rosa26LSL-tdTomato/+,adult,luna,adult,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,121919,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000090575021996,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41196951,,GSM9256796,,,train,sda-all,samples/GSE308959/GSM9256796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9256797,GSE308959,GSE308959,The origin of hepatocellular carcinoma is regulated by metabolic zonation [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,WT,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,156456,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999930964653903,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41196951,,GSM9256797,,,train,sda-all,samples/GSE308959/GSM9256797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM9264148,GSE309269,GSE309269,Transcriptional programs dictating tumor cell fate decisions in neuroblastoma lymph node metastasis [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,neuroblastoma (primary),tumour tissue,MONDO:0005072,neuroblastoma,disease,luna,neuroblastoma,primary,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7064,18085,counts,pixel,4.827746402951347,platform_constant,True,H&E,4.827746402951347,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41279557;42467756,,GSM9264148,,,test,hesrt,samples/GSE309269/GSM9264148,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9264149,GSE309269,GSE309269,Transcriptional programs dictating tumor cell fate decisions in neuroblastoma lymph node metastasis [spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0002429,cervical lymph node,neuroblastoma (lymph node metastasis),metastasis,MONDO:0005072,neuroblastoma,disease,luna,neuroblastoma,lymph node metastasis,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4705,18085,counts,pixel,4.012619659462263,platform_constant,True,H&E,4.012619659462263,HESRT_HUMAN_REVIEW,,,image_partial_coverage,zero_count_observations,human_visual_review,,,,41279557;42467756,,GSM9264149,,,test,hesrt,samples/GSE309269/GSM9264149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9266971,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Anolis carolinensis,28377,green anole,Anolis carolinensis,28377,,False,False,GEO organism field,Anolis carolinensis,Anolis carolinensis,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,636,21554,counts,pixel,0.34364058265981656,platform_constant,True,H&E,0.5000138771828966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266971,,,train,hesrt,samples/GSE309408/GSM9266971,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9266972,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Anolis carolinensis,28377,green anole,Anolis carolinensis,28377,,False,False,GEO organism field,Anolis carolinensis,Anolis carolinensis,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,505,21554,counts,pixel,0.3436426116838488,platform_constant,True,H&E,0.5000008426743788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266972,,,train,hesrt,samples/GSE309408/GSM9266972,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9266973,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Taeniopygia guttata,59729,zebra finch,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1025,16619,counts,pixel,0.3436344958033582,platform_constant,True,H&E,0.5000013281685175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266973,,,train,hesrt,samples/GSE309408/GSM9266973,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.48, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM9266974,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Taeniopygia guttata,59729,zebra finch,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,eye,luna,UBERON:0000966,retina,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,777,16619,counts,pixel,0.3436344958033582,platform_constant,True,H&E,0.49999331791264384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266974,,,train,hesrt,samples/GSE309408/GSM9266974,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM9266975,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Taeniopygia guttata,59729,zebra finch,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1109,16619,counts,pixel,0.3436344958033582,platform_constant,True,H&E,0.5000022912852732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266975,,,train,hesrt,samples/GSE309408/GSM9266975,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9266976,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Taeniopygia guttata,59729,zebra finch,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,eye,luna,UBERON:0000966,retina,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,479,16619,counts,pixel,0.3436344958033582,platform_constant,True,H&E,0.49999603693032,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266976,,,train,hesrt,samples/GSE309408/GSM9266976,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.51, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9266977,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Columba livia,8932,rock pigeon,Columba livia,8932,,False,False,GEO organism field,Columba livia,,eye,luna,UBERON:0000966,retina,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1563,15392,counts,pixel,0.3424657534246575,platform_constant,True,H&E,0.4999871395674658,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266977,,,train,hesrt,samples/GSE309408/GSM9266977,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9266978,GSE309408,GSE309408,Comparative Eye Transcriptome Atlas,Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,eye,luna,UBERON:0000966,retina,Eye,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1522,17007,counts,pixel,0.34364058265981656,platform_constant,True,H&E,0.49999460250972005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266978,,,train,hesrt,samples/GSE309408/GSM9266978,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9268669,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19329,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268669,,,train,sda-all,samples/GSE309522/GSM9268669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268670,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,,,normal,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32791,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268670,,,train,sda-all,samples/GSE309522/GSM9268670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268671,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,105002,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268671,,,train,sda-all,samples/GSE309522/GSM9268671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268672,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,98814,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268672,,,train,sda-all,samples/GSE309522/GSM9268672,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268673,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,96874,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268673,,,train,sda-all,samples/GSE309522/GSM9268673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268674,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,95630,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268674,,,train,sda-all,samples/GSE309522/GSM9268674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268675,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,111719,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268675,,,train,sda-all,samples/GSE309522/GSM9268675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268676,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,132481,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268676,,,train,sda-all,samples/GSE309522/GSM9268676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268677,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,90338,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268677,,,train,sda-all,samples/GSE309522/GSM9268677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268678,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,206667,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268678,,,train,sda-all,samples/GSE309522/GSM9268678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9268679,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,216320,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268679,,,train,sda-all,samples/GSE309522/GSM9268679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268680,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,238897,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268680,,,train,sda-all,samples/GSE309522/GSM9268680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9268681,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,129407,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268681,,,train,sda-all,samples/GSE309522/GSM9268681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268682,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,292138,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268682,,,train,sda-all,samples/GSE309522/GSM9268682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268683,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,203316,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268683,,,train,sda-all,samples/GSE309522/GSM9268683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9268684,GSE309522,GSE309522,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0002509,mesenteric lymph node,MLN,primary tissue,MONDO:0000827,salmonellosis,disease,luna,,STm SL1344 1e8 CFU oral,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,151422,541,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268684,,,train,sda-all,samples/GSE309522/GSM9268684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM9269270,GSE309565,GSE309565,Morphological and Functional Diversity of Spatially Resolved Vestibular Ganglion Neuron Cell Types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0002824,vestibular ganglion,vestibular ganglion,primary tissue,,,normal,luna,,Wildtype,not stated,luna,not stated,,male,sample text,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,73354,19059,counts,um,1.0,verified,True,H&E,0.9172001277733453,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9269270,,,test,sda-all,samples/GSE309565/GSM9269270,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9269271,GSE309565,GSE309565,Morphological and Functional Diversity of Spatially Resolved Vestibular Ganglion Neuron Cell Types,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,uberon_chain,UBERON:0002824,vestibular ganglion,vestibular ganglion,primary tissue,,,perturbation,luna,,Tmie ko,not stated,luna,not stated,,female,sample text,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,33534,19059,counts,um,1.0,verified,True,H&E,1.0378371158232178,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9269271,,,test,sda-all,samples/GSE309565/GSM9269271,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9283597,GSE309857,GSE309857,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,TDP-43 KO,neonatal or infant,luna,neonatal or infant,Post natal day 15,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2381,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42420559,,GSM9283597,,,train,sda-all,samples/GSE309857/GSM9283597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9283598,GSE309857,GSE309857,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,TDP-43 WT,neonatal or infant,luna,neonatal or infant,Post natal day 15,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2324,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42420559,,GSM9283598,,,train,sda-all,samples/GSE309857/GSM9283598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9283599,GSE309857,GSE309857,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,TDP-43 KO,neonatal or infant,luna,neonatal or infant,Post natal day 15,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2530,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42420559,,GSM9283599,,,train,sda-all,samples/GSE309857/GSM9283599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9283600,GSE309857,GSE309857,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,TDP-43 WT,neonatal or infant,luna,neonatal or infant,Post natal day 15,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2499,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42420559,,GSM9283600,,,train,sda-all,samples/GSE309857/GSM9283600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9287769,GSE310073,GSE310073,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,"Oligomer-treated volumetric muscle loss, 8 weeks",adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2789,25627,counts,pixel,5.041293105627904,platform_constant,True,H&E,5.041293105627904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287769,,,train,hesrt,samples/GSE310073/GSM9287769,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.91, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9287770,GSE310073,GSE310073,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,"Oligomer-treated volumetric muscle loss, 8 weeks",adult,luna,adult,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1877,25627,counts,pixel,5.044573995940105,platform_constant,True,H&E,5.044573995940105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287770,,,train,hesrt,samples/GSE310073/GSM9287770,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9287771,GSE310073,GSE310073,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2159,25627,counts,pixel,5.00897396334364,platform_constant,True,H&E,5.00897396334364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287771,,,train,hesrt,samples/GSE310073/GSM9287771,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.48, ""uberon"": 0.96, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9287772,GSE310073,GSE310073,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1941,25627,counts,pixel,5.039860635012982,platform_constant,True,H&E,5.039860635012982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287772,,,train,hesrt,samples/GSE310073/GSM9287772,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.53, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9287773,GSE310073,GSE310073,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2538,25627,counts,pixel,4.4688911311082675,platform_constant,True,H&E,4.4688911311082675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287773,,,train,hesrt,samples/GSE310073/GSM9287773,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.44, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9287774,GSE310073,GSE310073,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1865,25627,counts,pixel,4.468891131108228,platform_constant,True,H&E,4.468891131108228,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287774,,,train,hesrt,samples/GSE310073/GSM9287774,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9288671,GSE310116,GSE310116,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,perturbation,luna,,GLA-3M-052-LS+OVA,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,GEO series text (assay_final.csv),Curio Trekker,sequencing-based,other,,,cell,18948,30881,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41712698,,GSM9288671,,,train,sda-all,samples/GSE310116/GSM9288671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9288673,GSE310116,GSE310116,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,perturbation,luna,,anti-cd4cd8 treatment,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,GEO series text (assay_final.csv),Curio Trekker,sequencing-based,other,,,cell,19873,31188,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,41712698,,GSM9288673,,,train,sda-all,samples/GSE310116/GSM9288673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9288675,GSE310116,GSE310116,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,NAÏVE,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,GEO series text (assay_final.csv),Curio Trekker,sequencing-based,other,,,cell,14317,31617,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,41712698,,GSM9288675,,,train,sda-all,samples/GSE310116/GSM9288675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9288677,GSE310116,GSE310116,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,perturbation,luna,,"GLA-3M-052-LS+OVA, and anti-cd4cd8 treatment",not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,GEO series text (assay_final.csv),Curio Trekker,sequencing-based,other,,,cell,13617,30694,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,41712698,,GSM9288677,,,train,sda-all,samples/GSE310116/GSM9288677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9289223,GSE310129,GSE310129,Spatial transcriptome sequencing of chicken and duck beaks,Anas platyrhynchos,8839,mallard,Anas platyrhynchos,8839,,False,False,GEO organism field,Anas platyrhynchos,,head and neck,uberon_chain,UBERON:0005094,beak,Embryo beak,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,22674,20858,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9289223,,,train,sda-all,samples/GSE310129/GSM9289223,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9289224,GSE310129,GSE310129,Spatial transcriptome sequencing of chicken and duck beaks,Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,head and neck,uberon_chain,UBERON:0005094,beak,Embryo beak,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,43687,20150,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9289224,,,train,sda-all,samples/GSE310129/GSM9289224,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9289225,GSE310129,GSE310129,Spatial transcriptome sequencing of chicken and duck beaks,Anas platyrhynchos,8839,mallard,Anas platyrhynchos,8839,,False,False,GEO organism field,Anas platyrhynchos,,head and neck,uberon_chain,UBERON:0005094,beak,Embryo beak,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,46306,21658,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9289225,,,train,sda-all,samples/GSE310129/GSM9289225,sda-tissue-disease-2.4,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9290277,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,61,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60275,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051036031438,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290277,,,train,sda-all,samples/GSE310162/GSM9290277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9290278,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,61,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46291,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999886208466077,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290278,,,train,sda-all,samples/GSE310162/GSM9290278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9290279,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,aged,age rule: bare number read as years,aged,72,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,86009,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000203832042397,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290279,,,train,sda-all,samples/GSE310162/GSM9290279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9290280,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,60,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55869,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998465787051244,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290280,,,train,sda-all,samples/GSE310162/GSM9290280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714910,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,57,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,184435,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999927181638122,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714910,,,train,sda-all,samples/GSE310162/GSM9714910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714911,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,57,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,142916,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999492351428176,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714911,,,train,sda-all,samples/GSE310162/GSM9714911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714912,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,47,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,279263,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714912,,,train,sda-all,samples/GSE310162/GSM9714912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714913,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,47,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,315205,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000102634918265,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714913,,,train,sda-all,samples/GSE310162/GSM9714913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714914,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,51,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,168520,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999652359321406,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714914,,,train,sda-all,samples/GSE310162/GSM9714914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714915,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,51,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117403,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025725457913,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714915,,,train,sda-all,samples/GSE310162/GSM9714915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714916,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,58,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32382,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997833622183707,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714916,,,train,sda-all,samples/GSE310162/GSM9714916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714917,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,58,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,97685,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998781478472787,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714917,,,train,sda-all,samples/GSE310162/GSM9714917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714918,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,50,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,70695,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500028801843318,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714918,,,train,sda-all,samples/GSE310162/GSM9714918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714919,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,50,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,133729,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965668772315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714919,,,train,sda-all,samples/GSE310162/GSM9714919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714920,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,aged,age rule: bare number read as years,aged,72,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,143969,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999959638359703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714920,,,train,sda-all,samples/GSE310162/GSM9714920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714921,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,60,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,31334,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499988174077578,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714921,,,train,sda-all,samples/GSE310162/GSM9714921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714922,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,aged,age rule: bare number read as years,aged,72,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,89890,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999857515062693,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714922,,,train,sda-all,samples/GSE310162/GSM9714922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714923,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,aged,age rule: bare number read as years,aged,72,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,109659,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500023854961832,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714923,,,train,sda-all,samples/GSE310162/GSM9714923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714924,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,57,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67502,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961268332989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714924,,,train,sda-all,samples/GSE310162/GSM9714924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714925,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0004849,pulmonary emphysema,disease,luna,COPD,,adult,age rule: bare number read as years,adult,57,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67326,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000117980179329,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714925,,,train,sda-all,samples/GSE310162/GSM9714925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714926,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,56,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,106542,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000085875240451,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714926,,,train,sda-all,samples/GSE310162/GSM9714926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714927,GSE310162,GSE310162,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,Normal,,adult,age rule: bare number read as years,adult,56,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,71688,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714927,,,train,sda-all,samples/GSE310162/GSM9714927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9294393,GSE310351,GSE310351,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0007318,saphenous vein,Human saphenous vein,primary tissue,,,disease,luna,,Day 0,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1101,37082,counts,pixel,4.062508830758159,platform_constant,True,H&E,4.062508830758159,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294393,,,train,hesrt,samples/GSE310351/GSM9294393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9294394,GSE310351,GSE310351,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0007318,saphenous vein,Human saphenous vein,primary tissue,,,disease,luna,,Day 7,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1009,37082,counts,pixel,4.980981506829042,platform_constant,True,H&E,4.980981506829042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294394,,,train,hesrt,samples/GSE310351/GSM9294394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9294395,GSE310351,GSE310351,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0007318,saphenous vein,Human saphenous vein,primary tissue,,,disease,luna,,Day 0,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,897,37082,counts,pixel,4.067206418711963,platform_constant,True,H&E,4.067206418711963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294395,,,train,hesrt,samples/GSE310351/GSM9294395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9294396,GSE310351,GSE310351,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0007318,saphenous vein,Human saphenous vein,primary tissue,,,disease,luna,,Day 7,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1055,37082,counts,pixel,4.875617193654191,platform_constant,True,H&E,4.875617193654191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294396,,,train,hesrt,samples/GSE310351/GSM9294396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9294397,GSE310351,GSE310351,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0007318,saphenous vein,Human saphenous vein,primary tissue,,,disease,luna,,Day 0,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,776,37082,counts,pixel,4.880800875419342,platform_constant,True,H&E,4.880800875419342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294397,,,train,hesrt,samples/GSE310351/GSM9294397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9294398,GSE310351,GSE310351,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0007318,saphenous vein,Human saphenous vein,primary tissue,,,disease,luna,,Day 7,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,837,37082,counts,pixel,4.981450256560158,platform_constant,True,H&E,4.981450256560158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294398,,,train,hesrt,samples/GSE310351/GSM9294398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9294399,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,124165,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294399,,,train,sda-all,samples/GSE310352/GSM9294399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294400,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,118096,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294400,,,train,sda-all,samples/GSE310352/GSM9294400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294401,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,67100,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294401,,,train,sda-all,samples/GSE310352/GSM9294401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294402,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,88103,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294402,,,train,sda-all,samples/GSE310352/GSM9294402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294403,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,89004,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294403,,,train,sda-all,samples/GSE310352/GSM9294403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294404,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,57464,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294404,,,train,sda-all,samples/GSE310352/GSM9294404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294405,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,73401,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294405,,,train,sda-all,samples/GSE310352/GSM9294405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294406,GSE310352+GSE310353,GSE310352,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,PDAC tumor resection,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,42857,989,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294406,,,train,sda-all,samples/GSE310352/GSM9294406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9295072,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005267,heart disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20647,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295072,,,train,sda-all,samples/GSE310386/GSM9295072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295073,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005267,heart disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17540,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295073,,,train,sda-all,samples/GSE310386/GSM9295073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295074,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005267,heart disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22076,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,zero_count_observations,VERIFIED,PASS,,,,,GSM9295074,,,train,sda-all,samples/GSE310386/GSM9295074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295075,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4941,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999828508711758,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9295075,,,train,sda-all,samples/GSE310386/GSM9295075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9295076,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,25198,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295076,,,train,sda-all,samples/GSE310386/GSM9295076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295077,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004995,cardiovascular disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17824,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295077,,,train,sda-all,samples/GSE310386/GSM9295077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295078,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005267,heart disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8945,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295078,,,train,sda-all,samples/GSE310386/GSM9295078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9295079,GSE310386,GSE310386,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005267,heart disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26990,541,counts,um,1.0,verified,False,,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295079,,,train,sda-all,samples/GSE310386/GSM9295079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9295276,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sbr,neonatal or infant,luna,neonatal or infant,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,194740,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.499984952223309,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295276,,,train,sda-all,samples/GSE310392/GSM9295276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9295277,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sham,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,139935,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999896608767574,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295277,,,train,sda-all,samples/GSE310392/GSM9295277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9295278,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sbr,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,188213,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896562100354,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295278,,,train,sda-all,samples/GSE310392/GSM9295278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9295279,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sbr,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,93791,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997807017543855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295279,,,train,sda-all,samples/GSE310392/GSM9295279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9295280,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sham,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,173043,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999821428571428,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295280,,,train,sda-all,samples/GSE310392/GSM9295280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295281,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sbr,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,128030,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077634393761,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295281,,,train,sda-all,samples/GSE310392/GSM9295281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9295282,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sbr,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,203086,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998885279317146,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295282,,,train,sda-all,samples/GSE310392/GSM9295282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9295283,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sham,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,225989,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000063690210814,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295283,,,train,sda-all,samples/GSE310392/GSM9295283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9295284,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sham,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,237982,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999223816751764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295284,,,train,sda-all,samples/GSE310392/GSM9295284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9295285,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sbr,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83621,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295285,,,train,sda-all,samples/GSE310392/GSM9295285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9295286,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,tumour tissue,MONDO:0004992,cancer,disease,luna,,sbr,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,85999,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979353773098,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295286,,,train,sda-all,samples/GSE310392/GSM9295286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9295287,GSE310392,GSE310392,Cellular senescence in human liver under normal aging and cancer [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,sham,adult,luna,adult,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,166376,13590,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137892995036,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295287,,,train,sda-all,samples/GSE310392/GSM9295287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9301207,GSE310443,GSE310443,Single-cell Spatial Transcriptomics Reveals Hepatocyte Metabolic Reprogramming in Fontan Associated Liver Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,63442,6175,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41734025,,GSM9301207,,,train,sda-all,samples/GSE310443/GSM9301207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9301208,GSE310443,GSE310443,Single-cell Spatial Transcriptomics Reveals Hepatocyte Metabolic Reprogramming in Fontan Associated Liver Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0979326,Fontan-associated liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,291840,6175,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41734025,,GSM9301208,,,train,sda-all,samples/GSE310443/GSM9301208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9304326,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,whole embryo section,whole embryo/organism,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E12.5,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,87360,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998709477596526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304326,,,val,sda-all,samples/GSE310599/GSM9304326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9304327,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,whole embryo section,whole embryo/organism,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E12.5,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83239,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304327,,,val,sda-all,samples/GSE310599/GSM9304327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304328,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,whole embryo section,whole embryo/organism,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E12.5,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77076,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000088422541853,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304328,,,val,sda-all,samples/GSE310599/GSM9304328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304329,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,whole embryo section,whole embryo/organism,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E12.5,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,85639,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304329,,,val,sda-all,samples/GSE310599/GSM9304329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304330,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E15.5,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,111702,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499993830207305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304330,,,val,sda-all,samples/GSE310599/GSM9304330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9304331,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E15.5,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,104906,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999712028961659,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304331,,,val,sda-all,samples/GSE310599/GSM9304331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9304332,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E15.5,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,124103,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000309363398872,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304332,,,val,sda-all,samples/GSE310599/GSM9304332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9304333,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E15.5,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,123862,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896935550365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304333,,,val,sda-all,samples/GSE310599/GSM9304333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM9304334,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E18.5,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83051,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000124120810923,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304334,,,val,sda-all,samples/GSE310599/GSM9304334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.86}",,
GSM9304335,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E18.5,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,123258,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500017686593562,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304335,,,val,sda-all,samples/GSE310599/GSM9304335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM9304336,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E18.5,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,115479,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499984952223309,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304336,,,val,sda-all,samples/GSE310599/GSM9304336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9304337,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,embryonic,age rule: embryonic day,embryonic,E18.5,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,111474,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998392725936813,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304337,,,val,sda-all,samples/GSE310599/GSM9304337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM9304338,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,neonatal or infant,age rule: postnatal day,neonatal or infant,P1,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,123209,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000091827364554,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304338,,,val,sda-all,samples/GSE310599/GSM9304338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9304339,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,neonatal or infant,age rule: postnatal day,neonatal or infant,P1,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,118278,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000154830718414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304339,,,val,sda-all,samples/GSE310599/GSM9304339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9304340,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,neonatal or infant,age rule: postnatal day,neonatal or infant,P1,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,115109,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304340,,,val,sda-all,samples/GSE310599/GSM9304340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9304341,GSE310599,GSE310599,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,whole-brain section,primary tissue,,,normal,luna,,WT mouse,neonatal or infant,age rule: postnatal day,neonatal or infant,P1,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,107596,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304341,,,val,sda-all,samples/GSE310599/GSM9304341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304473,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,13 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,838,17943,counts,pixel,3.9904344223381107,platform_constant,True,H&E,3.9904344223381107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304473,,,train,hesrt,samples/GSE310610/GSM9304473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304474,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,13 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3792,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304474,,,train,hesrt,samples/GSE310610/GSM9304474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9304475,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,15 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3271,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304475,,,train,hesrt,samples/GSE310610/GSM9304475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304476,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0700126,trisomy 21,disease,luna,Trisomy 21,Trisomy 21,fetal,luna,fetal,16 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4411,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304476,,,train,hesrt,samples/GSE310610/GSM9304476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304477,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,16 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3190,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304477,,,train,hesrt,samples/GSE310610/GSM9304477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304478,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0700126,trisomy 21,disease,luna,Trisomy 21,Trisomy 21,fetal,luna,fetal,16 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4198,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304478,,,train,hesrt,samples/GSE310610/GSM9304478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304479,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,17 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4251,17943,counts,pixel,4.134491152973616,platform_constant,True,H&E,4.134491152973616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304479,,,train,hesrt,samples/GSE310610/GSM9304479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9304480,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0700126,trisomy 21,disease,luna,Trisomy 21,Trisomy 21,fetal,luna,fetal,17 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4146,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304480,,,train,hesrt,samples/GSE310610/GSM9304480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304481,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,18 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3130,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304481,,,train,hesrt,samples/GSE310610/GSM9304481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304482,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,18 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3251,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304482,,,train,hesrt,samples/GSE310610/GSM9304482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304483,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0700126,trisomy 21,disease,luna,Trisomy 21,Trisomy 21,fetal,luna,fetal,19 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4558,17943,counts,pixel,3.9133024009741617,platform_constant,True,H&E,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304483,,,train,hesrt,samples/GSE310610/GSM9304483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304484,GSE310610,GSE310610,Spatial Transcriptomics of Human Fetal Lungs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,No Lung Disease,fetal,luna,fetal,20 weeks,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4399,17943,counts,pixel,4.0,platform_constant,True,H&E,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304484,,,train,hesrt,samples/GSE310610/GSM9304484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9305563,GSE310658,GSE310658,Xenium In Situ analysis of mouse skin mock-treated or treated with SspA and HDM,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0000014,zone of skin,Whole dorsal skin,primary tissue,,,normal,luna,,Mock (epicutaneous PBS),not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15908,501,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000120230843219,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9305563,,,train,sda-all,samples/GSE310658/GSM9305563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9305564,GSE310658,GSE310658,Xenium In Situ analysis of mouse skin mock-treated or treated with SspA and HDM,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0002097,skin of body,Whole dorsal skin,primary tissue,,,perturbation,luna,,Epicutaneous SspA+HDM,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46097,539,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998883263847527,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9305564,,,train,sda-all,samples/GSE310658/GSM9305564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9309230,GSE310797,GSE310797,Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,oral cavity,luna,UBERON:0000167,oral cavity,OSCC tumor,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1171,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41851114,,GSM9309230,,,train,sda-all,samples/GSE310797/GSM9309230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9309231,GSE310797,GSE310797,Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,oral cavity,luna,UBERON:0000167,oral cavity,OSCC tumor,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,2338,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41851114,,GSM9309231,,,train,sda-all,samples/GSE310797/GSM9309231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9309232,GSE310797,GSE310797,Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,oral cavity,luna,UBERON:0000167,oral cavity,OSCC tumor,tumour tissue,MONDO:0004958,oral cavity squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1990,18085,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41851114,,GSM9309232,,,train,sda-all,samples/GSE310797/GSM9309232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9312233,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,Quadriceps Muscle,primary tissue,,,normal,luna,,Immediate Freeze (CTR),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2448,32285,counts,um,1.0,verified,True,H&E,3.929347132038517,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312233,,,train,sda-all,samples/GSE310921/GSM9312233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9312234,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,Quadriceps Muscle,primary tissue,,,normal,luna,,Immediate Freeze (CTR),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2818,32285,counts,um,1.0,verified,True,H&E,4.00696585313117,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312234,,,train,sda-all,samples/GSE310921/GSM9312234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9312235,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,Quadriceps Muscle,primary tissue,,,perturbation,luna,,Transplant Solution 24hr,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2718,32285,counts,um,1.0,verified,True,H&E,3.9799359186422136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312235,,,train,sda-all,samples/GSE310921/GSM9312235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9312236,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,Quadriceps Muscle,primary tissue,,,perturbation,luna,,Transplant Solution 24hr,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2736,32285,counts,um,1.0,verified,True,H&E,3.9836025352406006,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312236,,,train,sda-all,samples/GSE310921/GSM9312236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.49, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9312237,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,Quadriceps Muscle,primary tissue,,,perturbation,luna,,Postmortem 48hr,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2745,32285,counts,um,1.0,verified,True,H&E,3.9298291455372714,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312237,,,train,sda-all,samples/GSE310921/GSM9312237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.61, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9312238,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skeletal muscle,luna,UBERON:0001377,quadriceps femoris,Quadriceps Muscle,primary tissue,,,perturbation,luna,,Postmortem 48hr,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2684,32285,counts,um,1.0,verified,True,H&E,3.971653797229367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312238,,,train,sda-all,samples/GSE310921/GSM9312238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.8300000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9312239,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0002381,pectoralis major,Pectoralis Major,primary tissue,,,perturbation,luna,,Transplant Solution 24hr,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2168,36601,counts,um,1.0,verified,True,H&E,4.179825593540337,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312239,,,train,sda-all,samples/GSE310921/GSM9312239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9312240,GSE310921,GSE310921,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skeletal muscle,luna,UBERON:0002381,pectoralis major,Pectoralis Major,primary tissue,,,perturbation,luna,,Transplant Solution 24hr,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1939,36601,counts,um,1.0,verified,True,H&E,4.218754565904826,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312240,,,train,sda-all,samples/GSE310921/GSM9312240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9317397,GSE311123,GSE311123,Spatial analysis revealed localization of osteblastogenesis-inhibitory factors in Giant Cell Tumor of Bone,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0000981,femur,Distal femur,tumour tissue,MONDO:0005674;MONDO:0002171,bone giant cell tumor;giant cell tumor,disease,luna,Giant Cell Tumor of Bone,surgical curettage,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,18085,counts,pixel,8.883456876836373,platform_constant,True,H&E,8.883456876836373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872383,,GSM9317397,,,val,hesrt,samples/GSE311123/GSM9317397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9320917,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,6275,48440,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9320917,,,train,sda-all,samples/GSE311199/GSM9320917,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9320919,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Mouse brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,6199,48440,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9320919,,,train,sda-all,samples/GSE311199/GSM9320919,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9320921,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Mouse embryo,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,32799,48440,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9320921,,,train,sda-all,samples/GSE311199/GSM9320921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9320923,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Human melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,6268,62700,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9320923,,,train,sda-all,samples/GSE311199/GSM9320923,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9738330,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Human melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,tissue,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,6381,62700,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9738330,,,train,sda-all,samples/GSE311199/GSM9738330,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9738332,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Mouse embryo,primary tissue,,,normal,luna,,tissue,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,17278,48440,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9738332,,,train,sda-all,samples/GSE311199/GSM9738332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9738334,GSE311199,GSE311199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Mouse embryo,primary tissue,,,normal,luna,,tissue,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,14784,48440,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42641604,,GSM9738334,,,train,sda-all,samples/GSE311199/GSM9738334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9322957,GSE311294,GSE311294,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,primary colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3742,18085,counts,pixel,7.0061248594673,platform_constant,True,H&E,7.0061248594673,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322957,,,train,hesrt,samples/GSE311294/GSM9322957,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9322958,GSE311294,GSE311294,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,primary colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4732,18085,counts,pixel,6.953015733910887,platform_constant,True,H&E,6.953015733910887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322958,,,train,hesrt,samples/GSE311294/GSM9322958,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9322959,GSE311294,GSE311294,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,primary colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3673,18085,counts,pixel,12.641669245169885,platform_constant,True,H&E,12.641669245169885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322959,,,train,hesrt,samples/GSE311294/GSM9322959,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9322960,GSE311294,GSE311294,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,primary colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4362,18085,counts,pixel,12.792072743730861,platform_constant,True,H&E,12.792072743730861,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM9322960,,,train,hesrt,samples/GSE311294/GSM9322960,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9322961,GSE311294,GSE311294,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,primary colorectal cancer,tumour tissue,MONDO:0005575,colorectal cancer,disease,luna,colorectal cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4564,18085,counts,pixel,12.698463345892323,platform_constant,True,H&E,12.698463345892323,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322961,,,train,hesrt,samples/GSE311294/GSM9322961,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9324190,GSE311369,GSE311369,A Complete Spatial Map of Mouse Retinal Ganglion Cells Reveals Density and Gene Expression Specializations [RGC_CrossSection],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,eye,luna,UBERON:0000966,retina,retina,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14886,5027,unknown,um,1.0,verified,True,fluorescence: DAPI,0.5000103576854025,VERIFIED,FAILED,FAILED,,,VERIFIED,PASS,,,41452983,,GSM9324190,,,train,sda-all,samples/GSE311369/GSM9324190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9324328,GSE311383,GSE311383,High-resolution spatial transcriptomics of human liver with VisiumHD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver Caudate,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,51,male,extracted field,Male,,,FFPE,Formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,640313,18085,counts,um,1.0,verified,True,H&E-like (heuristic),2.4739122790263584,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42342734,,GSM9324328,,,train,sda-all,samples/GSE311383/GSM9324328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9324329,GSE311383,GSE311383,High-resolution spatial transcriptomics of human liver with VisiumHD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver Caudate,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,47,female,extracted field,Female,,,FFPE,Formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,466284,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.7851266739931295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42342734,,GSM9324329,,,train,sda-all,samples/GSE311383/GSM9324329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.77, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9324330,GSE311383,GSE311383,High-resolution spatial transcriptomics of human liver with VisiumHD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0001114,right lobe of liver,Liver Right Lobe,primary tissue,,,normal,luna,,,juvenile,luna,juvenile,15-19,male,extracted field,Male,,,FFPE,Formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,452402,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.622251882262378,VERIFIED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42342734,,GSM9324330,,,train,sda-all,samples/GSE311383/GSM9324330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9509134,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67705,6684,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000265330188679,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509134,,,val,sda-all,samples/GSE311609/GSM9509134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509135,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,219228,6446,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999417249417244,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509135,,,val,sda-all,samples/GSE311609/GSM9509135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509136,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0004965;MONDO:0005233,acinar cell carcinoma;non-small cell lung carcinoma,disease,luna,Acinar cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64883,5606,counts,um,1.0,verified,True,fluorescence: DAPI,0.500017686593562,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509136,,,val,sda-all,samples/GSE311609/GSM9509136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509137,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64819,6210,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000045934772622,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509137,,,val,sda-all,samples/GSE311609/GSM9509137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509138,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,36829,5335,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862372694742,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509138,,,val,sda-all,samples/GSE311609/GSM9509138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509139,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,78736,5584,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000022954733266,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509139,,,val,sda-all,samples/GSE311609/GSM9509139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509140,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,71776,538,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000180747779385,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509140,,,val,sda-all,samples/GSE311609/GSM9509140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509141,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55176,535,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999883816998864,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509141,,,val,sda-all,samples/GSE311609/GSM9509141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509142,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37298,526,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012903891814,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509142,,,val,sda-all,samples/GSE311609/GSM9509142,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509143,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,247597,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011510128913,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509143,,,val,sda-all,samples/GSE311609/GSM9509143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509144,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,841970,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896330085009,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509144,,,val,sda-all,samples/GSE311609/GSM9509144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509145,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,73037,529,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979353773098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509145,,,val,sda-all,samples/GSE311609/GSM9509145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509146,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,81488,516,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509146,,,val,sda-all,samples/GSE311609/GSM9509146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509147,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,49489,470,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999767465894998,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509147,,,val,sda-all,samples/GSE311609/GSM9509147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509148,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,Adenocarcinoma with mixed subtypes,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52832,487,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999819233550252,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509148,,,val,sda-all,samples/GSE311609/GSM9509148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509149,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,189865,528,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000063334868724,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509149,,,val,sda-all,samples/GSE311609/GSM9509149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509150,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,677474,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999875862068965,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509150,,,val,sda-all,samples/GSE311609/GSM9509150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509151,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0004965;MONDO:0005233,acinar cell carcinoma;non-small cell lung carcinoma,disease,luna,Acinar cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50050,520,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999985269856233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509151,,,val,sda-all,samples/GSE311609/GSM9509151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509152,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57588,535,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999985269856233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509152,,,val,sda-all,samples/GSE311609/GSM9509152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509153,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43887,511,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999354872006607,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509153,,,val,sda-all,samples/GSE311609/GSM9509153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509154,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233;MONDO:0004970,non-small cell lung carcinoma;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16837,442,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000112849834486,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509154,,,val,sda-all,samples/GSE311609/GSM9509154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509155,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,primary NSCLC,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,"Sq. cell carcinoma, keratinizing, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63674,528,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000172239573765,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509155,,,val,sda-all,samples/GSE311609/GSM9509155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509156,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Infiltrating duct carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,69009,498,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000112849834486,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509156,,,val,sda-all,samples/GSE311609/GSM9509156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509157,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Infiltrating duct carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16589,446,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999941023826374,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509157,,,val,sda-all,samples/GSE311609/GSM9509157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509158,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0000552,breast lobular carcinoma,disease,luna,"Lobular carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38023,457,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077407369181,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509158,,,val,sda-all,samples/GSE311609/GSM9509158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509159,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,Infiltr. duct mixed with other types of carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77463,532,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999529792356306,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509159,,,val,sda-all,samples/GSE311609/GSM9509159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9509160,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Infiltrating duct carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,145946,525,counts,um,1.0,verified,True,fluorescence: DAPI,0.500011932035128,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509160,,,val,sda-all,samples/GSE311609/GSM9509160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509161,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Infiltrating duct carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45496,456,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000134308620546,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509161,,,val,sda-all,samples/GSE311609/GSM9509161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509162,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0003214,breast cancer;apocrine adenocarcinoma,disease,luna,Apocrine adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,153365,536,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051741470048,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509162,,,val,sda-all,samples/GSE311609/GSM9509162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509163,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004970,breast cancer;adenocarcinoma,disease,luna,"Adenocarcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,96145,521,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000113749172733,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509163,,,val,sda-all,samples/GSE311609/GSM9509163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509164,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66381,529,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077407369181,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509164,,,val,sda-all,samples/GSE311609/GSM9509164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509165,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Infiltrating duct carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38496,525,counts,um,1.0,verified,True,fluorescence: DAPI,0.50001036116045,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509165,,,val,sda-all,samples/GSE311609/GSM9509165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9509166,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Infiltrating duct carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,98420,536,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137892995036,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509166,,,val,sda-all,samples/GSE311609/GSM9509166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9509167,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48542,514,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996508379888277,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509167,,,val,sda-all,samples/GSE311609/GSM9509167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9509168,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52999,517,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103422339225,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509168,,,val,sda-all,samples/GSE311609/GSM9509168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509169,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,96077,514,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068913238233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509169,,,val,sda-all,samples/GSE311609/GSM9509169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509170,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254,breast cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,135290,529,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068913238233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509170,,,val,sda-all,samples/GSE311609/GSM9509170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9509171,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0004993,breast cancer;carcinoma,disease,luna,"Carcinoma, NOS",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,187556,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965507726269,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509171,,,val,sda-all,samples/GSE311609/GSM9509171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509172,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0003214,breast cancer;apocrine adenocarcinoma,disease,luna,Apocrine adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,124706,540,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999933463449254,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509172,,,val,sda-all,samples/GSE311609/GSM9509172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509173,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0003214,breast cancer;apocrine adenocarcinoma,disease,luna,Apocrine adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,141615,532,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103483410813,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509173,,,val,sda-all,samples/GSE311609/GSM9509173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509174,GSE311609,GSE311609,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,breast,luna,UBERON:0000310,breast,primary breast cancer,tumour tissue,MONDO:0007254;MONDO:0003214,breast cancer;apocrine adenocarcinoma,disease,luna,Apocrine adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,108277,535,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000172508970466,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509174,,,val,sda-all,samples/GSE311609/GSM9509174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9328544,GSE311636,GSE311636,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse [cosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,13445,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9328544,,,val,sda-all,samples/GSE311636/GSM9328544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9328545,GSE311636,GSE311636,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse [cosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,27120,1157,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9328545,,,val,sda-all,samples/GSE311636/GSM9328545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9329349,GSE311681,GSE311681,An immunobiliary single-cell atlas resolves crosstalk between type 2 conventional dendritic cells and γδ T cells in cholangitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0004789,cholangitis,disease,luna,,DDC diet for 5 days,not stated,luna,not stated,,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,10x Genomics Xenium In Situ,,,cell,100627,541,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41963321,,GSM9329349,,,train,hesrt,samples/GSE311681/GSM9329349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9330221,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,aCD154 (C10),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,696,74220,counts,um,1.0,verified,True,H&E,4.076039130546137,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330221,,,train,sda-all,samples/GSE311717/GSM9330221,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9330222,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,aCD154 (C10),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,327,74220,counts,um,1.0,verified,True,H&E,3.978701947452763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330222,,,train,sda-all,samples/GSE311717/GSM9330222,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9330223,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,aCD154 (C10),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,302,74220,counts,um,1.0,verified,True,H&E,4.109334146537467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330223,,,train,sda-all,samples/GSE311717/GSM9330223,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.27, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9330224,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,aCD154 (C10),not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,391,74220,counts,um,1.0,verified,True,H&E,4.122726622962377,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330224,,,train,sda-all,samples/GSE311717/GSM9330224,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.72, ""disease_status"": 0.27, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330225,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,aCD154 (C10)+ Abatacept,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,187,74220,counts,um,1.0,verified,True,H&E,4.328234848540216,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330225,,,train,sda-all,samples/GSE311717/GSM9330225,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330226,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,aCD154 (C10)+ Abatacept,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,349,74220,counts,um,1.0,verified,True,H&E,4.500168523065462,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330226,,,train,sda-all,samples/GSE311717/GSM9330226,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330227,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,aCD154 (C10)+ Abatacept,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,421,74220,counts,um,1.0,verified,True,H&E,4.340985474479342,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330227,,,train,sda-all,samples/GSE311717/GSM9330227,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.32, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330228,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,aCD154 (C10)+ Abatacept,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,219,74220,counts,um,1.0,verified,True,H&E,4.355436691476438,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330228,,,train,sda-all,samples/GSE311717/GSM9330228,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.52, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9330229,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,CD154  (PG405) +MD3,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,226,74220,counts,um,1.0,verified,True,H&E,4.3601009533662065,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330229,,,train,sda-all,samples/GSE311717/GSM9330229,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9330230,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,CD154  (PG405) +MD3,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,111,74220,counts,um,1.0,verified,True,H&E,4.257821642750977,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330230,,,train,sda-all,samples/GSE311717/GSM9330230,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.39, ""uberon"": 0.96, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9330231,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,CD154 (PG405)+ MD3,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,92,74220,counts,um,1.0,verified,True,H&E,4.357722481798944,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330231,,,train,sda-all,samples/GSE311717/GSM9330231,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 0.4, ""uberon"": 0.96, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9330232,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,CD154 (PG405)+ MD3,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,409,74220,counts,um,1.0,verified,True,H&E,4.198147221358142,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330232,,,train,sda-all,samples/GSE311717/GSM9330232,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.75, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330233,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,CD154 (PG405)+ MD3,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,344,74220,counts,um,1.0,verified,True,H&E,4.03986183069716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330233,,,train,sda-all,samples/GSE311717/GSM9330233,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9330234,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,disease,luna,,CD154 (PG405) + Abatacept + Tocilizumab,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,519,74220,counts,um,1.0,verified,True,H&E,4.04184106768196,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330234,,,train,sda-all,samples/GSE311717/GSM9330234,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 0.78, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9330235,GSE311717,GSE311717,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,kidney,luna,UBERON:0002113,kidney,kidney,xenograft,,,perturbation,luna,,aCD154 (5C8) + Abatacept + Tocilizumab,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,563,74220,counts,um,1.0,verified,True,H&E,4.022573615282892,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330235,,,train,sda-all,samples/GSE311717/GSM9330235,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9331952,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0002127,inferior olivary complex,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,normal,luna,,Saline injection in the caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,988,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331952,,,train,sda-all,samples/GSE311781/GSM9331952,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.31, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM9331953,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,normal,luna,,Saline injection in the caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,996,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331953,,,train,sda-all,samples/GSE311781/GSM9331953,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.41000000000000003, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM9331954,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,normal,luna,,Saline injection in the caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,902,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331954,,,train,sda-all,samples/GSE311781/GSM9331954,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9331955,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,normal,luna,,Saline injection in the caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,1052,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331955,,,train,sda-all,samples/GSE311781/GSM9331955,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.38, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM9331956,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,disease,luna,,lesion at caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,765,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331956,,,train,sda-all,samples/GSE311781/GSM9331956,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9331957,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,disease,luna,,lesion at caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,903,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331957,,,train,sda-all,samples/GSE311781/GSM9331957,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9331958,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,disease,luna,,lesion at caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,832,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331958,,,train,sda-all,samples/GSE311781/GSM9331958,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9331961,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,disease,luna,,lesion at caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,840,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331961,,,train,sda-all,samples/GSE311781/GSM9331961,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9331962,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,disease,luna,,lesion at caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,865,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331962,,,train,sda-all,samples/GSE311781/GSM9331962,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9331963,GSE311781,GSE311781,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,brain,luna,UBERON:0007416,cerebellar peduncle,Caudal cerebellar preduncle (ccp) and Inferior Olive,primary tissue,,,disease,luna,,lesion at caudal cerebellar peduncle (ccp),adult,age rule: age with unit,adult,9-12 week old,female,extracted field,Female,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,cell,827,34034,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331963,,,train,sda-all,samples/GSE311781/GSM9331963,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9331988,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,288,18085,counts,pixel,3.0476066595333484,platform_constant,True,H&E,3.0476066595333484,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331988,,,train,hesrt,samples/GSE311783/GSM9331988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331989,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1268,18085,counts,pixel,4.0078764943144485,platform_constant,True,H&E,4.0078764943144485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331989,,,train,hesrt,samples/GSE311783/GSM9331989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331990,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,924,18085,counts,pixel,4.009138974147024,platform_constant,True,H&E,4.009138974147024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331990,,,train,hesrt,samples/GSE311783/GSM9331990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9331991,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,661,18085,counts,pixel,3.014103003982557,platform_constant,True,H&E,3.014103003982557,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41707654,,GSM9331991,,,train,hesrt,samples/GSE311783/GSM9331991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331992,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1330,18085,counts,pixel,4.527272746468362,platform_constant,True,H&E,4.527272746468362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331992,,,train,hesrt,samples/GSE311783/GSM9331992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331993,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1374,18085,counts,pixel,4.508333334528059,platform_constant,True,H&E,4.508333334528059,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331993,,,train,hesrt,samples/GSE311783/GSM9331993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9331994,GSE311783+GSE311789,GSE311783,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Primary PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,pancreatic ductal adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2028,18085,counts,pixel,4.057952223859324,platform_constant,True,H&E,4.057952223859324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331994,,,train,hesrt,samples/GSE311783/GSM9331994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334013,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,33030,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334013,,,train,sda-all,samples/GSE311892/GSM9334013,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334017,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,23972,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334017,,,train,sda-all,samples/GSE311892/GSM9334017,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334020,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7571,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334020,,,train,sda-all,samples/GSE311892/GSM9334020,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334022,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,23617,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334022,,,train,sda-all,samples/GSE311892/GSM9334022,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334024,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4559,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334024,,,train,sda-all,samples/GSE311892/GSM9334024,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.98, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334026,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2950,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334026,,,train,sda-all,samples/GSE311892/GSM9334026,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334029,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7504,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334029,,,train,sda-all,samples/GSE311892/GSM9334029,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334030,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4509,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334030,,,train,sda-all,samples/GSE311892/GSM9334030,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9334032,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,11607,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334032,,,train,sda-all,samples/GSE311892/GSM9334032,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334034,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,47129,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334034,,,train,sda-all,samples/GSE311892/GSM9334034,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334035,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,9432,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334035,,,train,sda-all,samples/GSE311892/GSM9334035,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334037,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2799,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334037,,,train,sda-all,samples/GSE311892/GSM9334037,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334040,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,14035,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334040,,,train,sda-all,samples/GSE311892/GSM9334040,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334042,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4226,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334042,,,train,sda-all,samples/GSE311892/GSM9334042,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334043,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,10345,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334043,,,train,sda-all,samples/GSE311892/GSM9334043,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334045,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6731,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334045,,,train,sda-all,samples/GSE311892/GSM9334045,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334048,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,9225,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334048,,,train,sda-all,samples/GSE311892/GSM9334048,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334049,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,21180,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334049,,,train,sda-all,samples/GSE311892/GSM9334049,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334051,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7731,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334051,,,train,sda-all,samples/GSE311892/GSM9334051,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334052,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,17036,960,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,41438752,,GSM9334052,,,train,sda-all,samples/GSE311892/GSM9334052,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.97, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334053,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6612,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334053,,,train,sda-all,samples/GSE311892/GSM9334053,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334054,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5086,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334054,,,train,sda-all,samples/GSE311892/GSM9334054,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334055,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4402,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334055,,,train,sda-all,samples/GSE311892/GSM9334055,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334056,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,13920,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334056,,,train,sda-all,samples/GSE311892/GSM9334056,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334057,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4751,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334057,,,train,sda-all,samples/GSE311892/GSM9334057,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334059,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5372,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334059,,,train,sda-all,samples/GSE311892/GSM9334059,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334060,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5850,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334060,,,train,sda-all,samples/GSE311892/GSM9334060,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.97, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334061,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,8018,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334061,,,train,sda-all,samples/GSE311892/GSM9334061,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334062,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,8669,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334062,,,train,sda-all,samples/GSE311892/GSM9334062,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334063,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6191,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334063,,,train,sda-all,samples/GSE311892/GSM9334063,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.97, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9334064,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5105,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334064,,,train,sda-all,samples/GSE311892/GSM9334064,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334066,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,8291,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334066,,,train,sda-all,samples/GSE311892/GSM9334066,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334067,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,normal,luna,,Healthy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,9417,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334067,,,train,sda-all,samples/GSE311892/GSM9334067,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334068,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,not stated,luna,,NR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,29482,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334068,,,train,sda-all,samples/GSE311892/GSM9334068,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334069,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,CR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7252,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334069,,,train,sda-all,samples/GSE311892/GSM9334069,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334070,GSE311892,GSE311892,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,UBERON:0000997,mammalian vulva,Vulva,primary tissue,,,disease,luna,,PR,not stated,luna,not stated,,unknown,not stated,,,,FFPE,formalin-fixed paraffin-embedded,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,17855,960,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334070,,,train,sda-all,samples/GSE311892/GSM9334070,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334384,GSE311909+GSE312368,GSE311909,A targetable developmental program co-regulates angiogenesis and immune evasion [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005105,melanoma,disease,luna,melanoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4619,18085,counts,pixel,7.284643603447272,platform_constant,True,H&E,7.284643603447272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41631877,,GSM9334384,,,val,hesrt,samples/GSE311909/GSM9334384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9334385,GSE311909+GSE312368,GSE311909,A targetable developmental program co-regulates angiogenesis and immune evasion [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0005105,melanoma,disease,luna,melanoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4795,18085,counts,pixel,4.13194742373365,platform_constant,True,H&E,4.13194742373365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41631877,,GSM9334385,,,val,hesrt,samples/GSE311909/GSM9334385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9336958,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,375327,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336958,,,train,hesrt,samples/GSE312053/GSM9336958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9336959,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,COVID-19,COVID-19,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,699160,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336959,,,train,hesrt,samples/GSE312053/GSM9336959,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9336960,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,634825,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336960,,,train,hesrt,samples/GSE312053/GSM9336960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9336961,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,630272,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336961,,,train,hesrt,samples/GSE312053/GSM9336961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9336962,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,600108,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336962,,,train,hesrt,samples/GSE312053/GSM9336962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9336963,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,655840,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336963,,,train,hesrt,samples/GSE312053/GSM9336963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9336964,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,649550,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336964,,,train,hesrt,samples/GSE312053/GSM9336964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9336965,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,696352,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336965,,,train,hesrt,samples/GSE312053/GSM9336965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9336966,GSE312053,GSE312053,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0006502,acute respiratory distress syndrome,disease,luna,acute respiratory distress syndrome,ARDS,adult,age rule: bare number read as years,adult,33,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,657601,18087,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336966,,,train,hesrt,samples/GSE312053/GSM9336966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9338171,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc1,SSc1,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1082,37082,counts,pixel,4.524676684126069,platform_constant,True,H&E,4.524676684126069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338171,,,train,hesrt,samples/GSE312129/GSM9338171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338172,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc2,SSc2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1016,37082,counts,pixel,3.7725347806420624,platform_constant,True,H&E,3.7725347806420624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338172,,,train,hesrt,samples/GSE312129/GSM9338172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338173,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc3,SSc3,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,581,37082,counts,pixel,5.669671451015597,platform_constant,True,H&E,5.669671451015597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338173,,,train,hesrt,samples/GSE312129/GSM9338173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338174,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc4,SSc4,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,628,37082,counts,pixel,1.9460507194363599,platform_constant,True,H&E,1.9460507194363599,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338174,,,train,hesrt,samples/GSE312129/GSM9338174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338175,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc5,SSc5,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1228,37082,counts,pixel,5.7847743574767785,platform_constant,True,H&E,5.7847743574767785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338175,,,train,hesrt,samples/GSE312129/GSM9338175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338176,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc6,SSc6,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,931,37082,counts,pixel,2.4761107424653304,platform_constant,True,H&E,2.4761107424653304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338176,,,train,hesrt,samples/GSE312129/GSM9338176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338177,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc7,SSc7,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1294,37082,counts,pixel,4.078824596312873,platform_constant,True,H&E,4.078824596312873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338177,,,train,hesrt,samples/GSE312129/GSM9338177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338178,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc8,SSc8,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,783,37082,counts,pixel,2.012532061730178,platform_constant,True,H&E,2.012532061730178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338178,,,train,hesrt,samples/GSE312129/GSM9338178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338179,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc9,SSc9,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1850,37082,counts,pixel,3.269655478689401,platform_constant,True,H&E,3.269655478689401,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338179,,,train,hesrt,samples/GSE312129/GSM9338179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338180,GSE312129,GSE312129,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Whole skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,systemic sclerosis,,not stated,luna,not stated,,unknown,not stated,,GSE312129:SSc10,SSc10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,824,37082,counts,pixel,2.2622230695498575,platform_constant,True,H&E,2.2622230695498575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338180,,,train,hesrt,samples/GSE312129/GSM9338180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9339560,GSE312168,GSE312168,Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,perturbation,luna,,AZX,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4057,25199,counts,pixel,4.0878575179149745,platform_constant,True,H&E,4.0878575179149745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41501078,,GSM9339560,,,train,hesrt,samples/GSE312168/GSM9339560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340363,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7269,18085,counts,pixel,7.142856785714368,platform_constant,True,H&E,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340363,,,test,hesrt,samples/GSE312204/GSM9340363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340364,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11346,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340364,,,test,hesrt,samples/GSE312204/GSM9340364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340365,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9022,18085,counts,pixel,7.142856785714368,platform_constant,True,H&E,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340365,,,test,hesrt,samples/GSE312204/GSM9340365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340366,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8851,18085,counts,pixel,7.284643603447272,platform_constant,True,H&E,7.284643603447272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340366,,,test,hesrt,samples/GSE312204/GSM9340366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340367,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13362,18085,counts,pixel,7.142856785714368,platform_constant,True,H&E,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340367,,,test,hesrt,samples/GSE312204/GSM9340367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340368,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7431,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340368,,,test,hesrt,samples/GSE312204/GSM9340368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340369,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11842,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340369,,,test,hesrt,samples/GSE312204/GSM9340369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340370,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9421,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340370,,,test,hesrt,samples/GSE312204/GSM9340370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340371,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8620,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340371,,,test,hesrt,samples/GSE312204/GSM9340371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340372,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11743,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340372,,,test,hesrt,samples/GSE312204/GSM9340372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340373,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8076,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340373,,,test,hesrt,samples/GSE312204/GSM9340373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340374,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,9890,18085,counts,pixel,7.284643603447296,platform_constant,True,H&E,7.284643603447296,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340374,,,test,hesrt,samples/GSE312204/GSM9340374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340375,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,14336,18085,counts,pixel,7.142856785714368,platform_constant,True,H&E,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340375,,,test,hesrt,samples/GSE312204/GSM9340375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340376,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,7139,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340376,,,test,hesrt,samples/GSE312204/GSM9340376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340377,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11174,18085,counts,pixel,7.284643603447301,platform_constant,True,H&E,7.284643603447301,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340377,,,test,hesrt,samples/GSE312204/GSM9340377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340378,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,10493,18085,counts,pixel,7.407971604473335,platform_constant,True,H&E,7.407971604473335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340378,,,test,hesrt,samples/GSE312204/GSM9340378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340379,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13643,18085,counts,pixel,7.142856785714368,platform_constant,True,H&E,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340379,,,test,hesrt,samples/GSE312204/GSM9340379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340380,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,13022,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340380,,,test,hesrt,samples/GSE312204/GSM9340380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340381,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,11709,18085,counts,pixel,7.142856785714311,platform_constant,True,H&E,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340381,,,test,hesrt,samples/GSE312204/GSM9340381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340382,GSE312204,GSE312204,Clonal biases dictate availability of colonic cancer driver mutations for transformation,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,normal colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,8816,18085,counts,pixel,7.284643603447287,platform_constant,True,H&E,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340382,,,test,hesrt,samples/GSE312204/GSM9340382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9342585,GSE312281,GSE312281,MicroRNA-200 family inhibits sebaceous gland fate specification by disrupting SOX9 function [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,"Control, Induced",neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,639,19059,counts,um,1.0,verified,True,H&E-like (heuristic),4.490608334920138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9342585,,,train,sda-all,samples/GSE312281/GSM9342585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.66, ""life_stage"": 0.89}",,
GSM9343668,GSE312327,GSE312327,Spatially-guided metabolomics profiling of heterogeneous human tumor tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4658,18085,counts,um,1.0,verified,True,H&E-like (heuristic),7.0095203801077535,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41922830,,GSM9343668,,,train,sda-all,samples/GSE312327/GSM9343668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9343669,GSE312327,GSE312327,Spatially-guided metabolomics profiling of heterogeneous human tumor tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.972315974580035,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41922830,,GSM9343669,,,train,sda-all,samples/GSE312327/GSM9343669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9344297,GSE312358,GSE312358,Multi-omics Analysis of Immune Cells Induced by Artificial Adjuvant Vector Cell (aAVC) Therapy in HPV-Positive Tumor-Bearing Mice [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,TC1 Tumor tissues,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Non Treat and aAVC treated,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,735196,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000006462286097,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42545372,,GSM9344297,,,train,sda-all,samples/GSE312358/GSM9344297,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9344298,GSE312358,GSE312358,Multi-omics Analysis of Immune Cells Induced by Artificial Adjuvant Vector Cell (aAVC) Therapy in HPV-Positive Tumor-Bearing Mice [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,TC1 Tumor tissues,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Non Treat and aAVC treated,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1156063,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999954780361757,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42545372,,GSM9344298,,,train,sda-all,samples/GSE312358/GSM9344298,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9345400,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16474,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345400,,,train,sda-all,samples/GSE312415/GSM9345400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345401,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005020,intestinal disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,36351,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345401,,,train,sda-all,samples/GSE312415/GSM9345401,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345402,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6656,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345402,,,train,sda-all,samples/GSE312415/GSM9345402,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345403,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,19820,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345403,,,train,sda-all,samples/GSE312415/GSM9345403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345404,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5881,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345404,,,train,sda-all,samples/GSE312415/GSM9345404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345405,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,10759,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345405,,,train,sda-all,samples/GSE312415/GSM9345405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345406,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,14728,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345406,,,train,sda-all,samples/GSE312415/GSM9345406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345407,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,27170,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345407,,,train,sda-all,samples/GSE312415/GSM9345407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345408,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005020;MONDO:0005046,intestinal disorder;immune system disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,27662,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345408,,,train,sda-all,samples/GSE312415/GSM9345408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345409,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,28855,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345409,,,train,sda-all,samples/GSE312415/GSM9345409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345410,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,31017,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345410,,,train,sda-all,samples/GSE312415/GSM9345410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345411,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,60856,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345411,,,train,sda-all,samples/GSE312415/GSM9345411,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345412,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,25909,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345412,,,train,sda-all,samples/GSE312415/GSM9345412,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345413,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,21182,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345413,,,train,sda-all,samples/GSE312415/GSM9345413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345414,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,12913,1156,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345414,,,train,sda-all,samples/GSE312415/GSM9345414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345415,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1557,1156,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345415,,,train,sda-all,samples/GSE312415/GSM9345415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345416,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,24060,6519,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345416,,,train,sda-all,samples/GSE312415/GSM9345416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345417,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,22395,6519,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345417,,,train,sda-all,samples/GSE312415/GSM9345417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345418,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,27160,6519,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345418,,,train,sda-all,samples/GSE312415/GSM9345418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345419,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16855,6519,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345419,,,train,sda-all,samples/GSE312415/GSM9345419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345420,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,27090,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345420,,,train,sda-all,samples/GSE312415/GSM9345420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9345421,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,24677,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345421,,,train,sda-all,samples/GSE312415/GSM9345421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345422,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,18947,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345422,,,train,sda-all,samples/GSE312415/GSM9345422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345423,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,25955,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345423,,,train,sda-all,samples/GSE312415/GSM9345423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345424,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,22416,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345424,,,train,sda-all,samples/GSE312415/GSM9345424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345425,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,26657,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345425,,,train,sda-all,samples/GSE312415/GSM9345425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345426,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,22267,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345426,,,train,sda-all,samples/GSE312415/GSM9345426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345427,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,colon,luna,UBERON:0001155,colon,Colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,27724,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345427,,,train,sda-all,samples/GSE312415/GSM9345427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345428,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,9655,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345428,,,train,sda-all,samples/GSE312415/GSM9345428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345429,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,8855,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345429,,,train,sda-all,samples/GSE312415/GSM9345429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345430,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,5117,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345430,,,train,sda-all,samples/GSE312415/GSM9345430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345431,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,14589,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345431,,,train,sda-all,samples/GSE312415/GSM9345431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345432,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,15107,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345432,,,train,sda-all,samples/GSE312415/GSM9345432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9345433,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,11996,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345433,,,train,sda-all,samples/GSE312415/GSM9345433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345434,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,37218,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345434,,,train,sda-all,samples/GSE312415/GSM9345434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345435,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,20804,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345435,,,train,sda-all,samples/GSE312415/GSM9345435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345436,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,22627,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345436,,,train,sda-all,samples/GSE312415/GSM9345436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345437,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,25693,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345437,,,train,sda-all,samples/GSE312415/GSM9345437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345438,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,26368,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345438,,,train,sda-all,samples/GSE312415/GSM9345438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345439,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,12861,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345439,,,train,sda-all,samples/GSE312415/GSM9345439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345440,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,18315,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345440,,,train,sda-all,samples/GSE312415/GSM9345440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345441,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,19965,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345441,,,train,sda-all,samples/GSE312415/GSM9345441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345442,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,32498,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345442,,,train,sda-all,samples/GSE312415/GSM9345442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345443,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,14463,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345443,,,train,sda-all,samples/GSE312415/GSM9345443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9345444,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,17433,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345444,,,train,sda-all,samples/GSE312415/GSM9345444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345445,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,19497,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345445,,,train,sda-all,samples/GSE312415/GSM9345445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345446,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,19873,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345446,,,train,sda-all,samples/GSE312415/GSM9345446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345447,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,12517,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345447,,,train,sda-all,samples/GSE312415/GSM9345447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345448,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16863,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345448,,,train,sda-all,samples/GSE312415/GSM9345448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345449,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,18859,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345449,,,train,sda-all,samples/GSE312415/GSM9345449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345450,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,17037,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345450,,,train,sda-all,samples/GSE312415/GSM9345450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345451,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16610,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345451,,,train,sda-all,samples/GSE312415/GSM9345451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9345452,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16576,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345452,,,train,sda-all,samples/GSE312415/GSM9345452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345453,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,13004,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345453,,,train,sda-all,samples/GSE312415/GSM9345453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345454,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,13155,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345454,,,train,sda-all,samples/GSE312415/GSM9345454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345455,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,20361,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345455,,,train,sda-all,samples/GSE312415/GSM9345455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9345456,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16059,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345456,,,train,sda-all,samples/GSE312415/GSM9345456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345457,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,14159,1157,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345457,,,train,sda-all,samples/GSE312415/GSM9345457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345458,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,19046,1204,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345458,,,train,sda-all,samples/GSE312415/GSM9345458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345459,GSE312415,GSE312415,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,20559,1202,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42049732,,GSM9345459,,,train,sda-all,samples/GSE312415/GSM9345459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345477,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,18573,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999081473316803,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345477,,,train,sda-all,samples/GSE312420/GSM9345477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345478,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005020;MONDO:0005046,intestinal disorder;immune system disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43530,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020549071181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345478,,,train,sda-all,samples/GSE312420/GSM9345478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345479,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14746,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000304383116884,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345479,,,train,sda-all,samples/GSE312420/GSM9345479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345480,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,39289,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000281762295081,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345480,,,train,sda-all,samples/GSE312420/GSM9345480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345481,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37372,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998534583821796,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345481,,,train,sda-all,samples/GSE312420/GSM9345481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345482,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,18004,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345482,,,train,sda-all,samples/GSE312420/GSM9345482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345483,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29364,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345483,,,train,sda-all,samples/GSE312420/GSM9345483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9345484,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005046,immune system disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,33863,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997494989979957,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345484,,,train,sda-all,samples/GSE312420/GSM9345484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345485,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,MONDO:0005020;MONDO:0005046,intestinal disorder;immune system disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32830,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000162069778405,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345485,,,train,sda-all,samples/GSE312420/GSM9345485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345486,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Ileum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38405,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000154830718414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345486,,,train,sda-all,samples/GSE312420/GSM9345486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345487,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50568,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345487,,,train,sda-all,samples/GSE312420/GSM9345487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345488,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60961,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000232270052648,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345488,,,train,sda-all,samples/GSE312420/GSM9345488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345489,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32860,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999483737738765,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345489,,,train,sda-all,samples/GSE312420/GSM9345489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345490,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23801,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999759747391543,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345490,,,train,sda-all,samples/GSE312420/GSM9345490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345491,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19288,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999909737982256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345491,,,train,sda-all,samples/GSE312420/GSM9345491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345492,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55979,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999827839500504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345492,,,train,sda-all,samples/GSE312420/GSM9345492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345493,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32120,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345493,,,train,sda-all,samples/GSE312420/GSM9345493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345494,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27515,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000232270052648,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345494,,,train,sda-all,samples/GSE312420/GSM9345494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345495,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,49481,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999827839500504,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345495,,,train,sda-all,samples/GSE312420/GSM9345495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345496,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26216,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49994212962962964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345496,,,train,sda-all,samples/GSE312420/GSM9345496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345497,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,33821,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999828273114433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345497,,,train,sda-all,samples/GSE312420/GSM9345497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345498,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28223,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999954094748439,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345498,,,train,sda-all,samples/GSE312420/GSM9345498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345499,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48947,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979332010582,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345499,,,train,sda-all,samples/GSE312420/GSM9345499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345500,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24369,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999589827727645,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345500,,,train,sda-all,samples/GSE312420/GSM9345500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345501,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26686,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000265330188679,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345501,,,train,sda-all,samples/GSE312420/GSM9345501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345502,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24852,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077407369181,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345502,,,train,sda-all,samples/GSE312420/GSM9345502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345503,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,36654,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999655615759026,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345503,,,train,sda-all,samples/GSE312420/GSM9345503,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345504,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23741,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49994212962962964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345504,,,train,sda-all,samples/GSE312420/GSM9345504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345505,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37399,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345505,,,train,sda-all,samples/GSE312420/GSM9345505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345506,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35904,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999655615759026,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345506,,,train,sda-all,samples/GSE312420/GSM9345506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345507,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,39937,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000149192067572,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345507,,,train,sda-all,samples/GSE312420/GSM9345507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345508,GSE312420,GSE312420,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34047,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345508,,,train,sda-all,samples/GSE312420/GSM9345508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347312,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compoun 48/80 (2-step control),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 1,mouse 1,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9742,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347312,,,test,sda-all,samples/GSE312493/GSM9347312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347313,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,untreated (UT),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 2,mouse 2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,21135,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347313,,,test,sda-all,samples/GSE312493/GSM9347313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347314,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compound 48/80 + capsaicin (2-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,12543,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347314,,,test,sda-all,samples/GSE312493/GSM9347314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347315,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,capsaicin (1-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,6625,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347315,,,test,sda-all,samples/GSE312493/GSM9347315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347316,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compoun 48/80 (2-step control),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 3,mouse 3,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,4041,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347316,,,test,sda-all,samples/GSE312493/GSM9347316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9347317,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,untreated (UT),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,17992,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347317,,,test,sda-all,samples/GSE312493/GSM9347317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347318,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compound 48/80 + capsaicin (2-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 8,mouse 8,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10060,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347318,,,test,sda-all,samples/GSE312493/GSM9347318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347319,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,capsaicin (1-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 8,mouse 8,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,9002,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347319,,,test,sda-all,samples/GSE312493/GSM9347319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347320,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compoun 48/80 (2-step control),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 9,mouse 9,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8075,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347320,,,test,sda-all,samples/GSE312493/GSM9347320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347322,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compound 48/80 + capsaicin (2-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 2,mouse 2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,13509,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347322,,,test,sda-all,samples/GSE312493/GSM9347322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347323,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,capsaicin (1-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 7,mouse 7,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,7028,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347323,,,test,sda-all,samples/GSE312493/GSM9347323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347324,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compound 48/80 + capsaicin (2-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 6,mouse 6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,12302,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347324,,,test,sda-all,samples/GSE312493/GSM9347324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9347325,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,capsaicin (1-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 5,mouse 5,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,8002,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347325,,,test,sda-all,samples/GSE312493/GSM9347325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347326,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compoun 48/80 (2-step control),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,11950,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347326,,,test,sda-all,samples/GSE312493/GSM9347326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347327,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,untreated (UT),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 5,mouse 5,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10708,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347327,,,test,sda-all,samples/GSE312493/GSM9347327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9347328,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compound 48/80 + capsaicin (2-step activation),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 9,mouse 9,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,12530,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347328,,,test,sda-all,samples/GSE312493/GSM9347328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9347330,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,compoun 48/80 (2-step control),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 7,mouse 7,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,7351,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347330,,,test,sda-all,samples/GSE312493/GSM9347330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347331,GSE312493,GSE312493,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,untreated (UT),not stated,luna,not stated,,unknown,not stated,,GSE312493:mouse 9,mouse 9,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,5934,5003,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42580342,,GSM9347331,,,test,sda-all,samples/GSE312493/GSM9347331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9351704,GSE312698,GSE312698,NanoString CosMx SMI (human) on ten human MASLD samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,405940,1176,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42151416,,GSM9351704,,,train,sda-all,samples/GSE312698/GSM9351704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9351705,GSE312698,GSE312698,NanoString CosMx SMI (human) on ten human MASLD samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,70886,1176,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42151416,,GSM9351705,,,train,sda-all,samples/GSE312698/GSM9351705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9351706,GSE312698,GSE312698,NanoString CosMx SMI (human) on ten human MASLD samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,35537,1176,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42151416,,GSM9351706,,,train,sda-all,samples/GSE312698/GSM9351706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9351707,GSE312698,GSE312698,NanoString CosMx SMI (human) on ten human MASLD samples,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0013209,metabolic dysfunction-associated steatotic liver disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,40313,1176,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42151416,,GSM9351707,,,train,sda-all,samples/GSE312698/GSM9351707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356905,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,962,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.49999934407216834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356905,,,train,hesrt,samples/GSE312910/GSM9356905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356906,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1157,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.4999863080122431,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356906,,,train,hesrt,samples/GSE312910/GSM9356906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356907,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1098,32285,counts,pixel,0.4907033630543836,platform_constant,True,H&E,0.5000085081408399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356907,,,train,hesrt,samples/GSE312910/GSM9356907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356908,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1429,32285,counts,pixel,0.4907033630543836,platform_constant,True,H&E,0.5000008356462918,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356908,,,train,hesrt,samples/GSE312910/GSM9356908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356909,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,900,32285,counts,pixel,0.49019607843137253,platform_constant,True,H&E,0.5000065802146106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356909,,,train,hesrt,samples/GSE312910/GSM9356909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356910,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1196,32285,counts,pixel,0.49019607843137253,platform_constant,True,H&E,0.49998651616360235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356910,,,train,hesrt,samples/GSE312910/GSM9356910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356911,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,987,32285,counts,pixel,0.49019607843137253,platform_constant,True,H&E,0.49999503850123045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356911,,,train,hesrt,samples/GSE312910/GSM9356911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356912,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1394,32285,counts,pixel,0.49019607843137253,platform_constant,True,H&E,0.4999873076658072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356912,,,train,hesrt,samples/GSE312910/GSM9356912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356913,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,975,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.4999903797727705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356913,,,train,hesrt,samples/GSE312910/GSM9356913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356914,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1241,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.5000120069115641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356914,,,train,hesrt,samples/GSE312910/GSM9356914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356915,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,968,32285,counts,pixel,0.4907033630543836,platform_constant,True,H&E,0.4999914083336366,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356915,,,train,hesrt,samples/GSE312910/GSM9356915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356916,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1426,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.5000129052963515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356916,,,train,hesrt,samples/GSE312910/GSM9356916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356917,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1010,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.5000131401251899,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356917,,,train,hesrt,samples/GSE312910/GSM9356917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356918,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1273,32285,counts,pixel,0.4907033630543836,platform_constant,True,H&E,0.5000041011184725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356918,,,train,hesrt,samples/GSE312910/GSM9356918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356919,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Lumbar spinal cord,primary tissue,,,perturbation,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1127,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.4999976596837136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356919,,,train,hesrt,samples/GSE312910/GSM9356919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356920,GSE312910,GSE312910,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0003038,thoracic spinal cord,Thoracic spinal cord,primary tissue,,,disease,luna,,uninjured/3/7/28 days post injury,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1551,32285,counts,pixel,0.49260486056599107,platform_constant,True,H&E,0.5000019672173606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356920,,,train,hesrt,samples/GSE312910/GSM9356920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9357155,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,11788,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896562100354,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357155,,,train,sda-all,samples/GSE312932/GSM9357155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357156,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,13706,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000196313440238,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357156,,,train,sda-all,samples/GSE312932/GSM9357156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357157,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,14700,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999070017359676,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357157,,,train,sda-all,samples/GSE312932/GSM9357157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357158,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,6953,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999383020730503,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357158,,,train,sda-all,samples/GSE312932/GSM9357158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357159,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,10967,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999793577981651,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357159,,,train,sda-all,samples/GSE312932/GSM9357159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357160,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9956,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997420907840434,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41411065,,GSM9357160,,,train,sda-all,samples/GSE312932/GSM9357160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357161,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,16147,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999885247406591,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41411065,,GSM9357161,,,train,sda-all,samples/GSE312932/GSM9357161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357162,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,6431,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000359269143912,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357162,,,train,sda-all,samples/GSE312932/GSM9357162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357163,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,15011,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.50001953125,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357163,,,train,sda-all,samples/GSE312932/GSM9357163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357164,GSE312932,GSE312932,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0005100,systemic sclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9893,9392,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999867272298254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357164,,,train,sda-all,samples/GSE312932/GSM9357164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9358871,GSE313006,GSE313006,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,COPD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,261504,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999911863211704,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358871,,,train,sda-all,samples/GSE313006/GSM9358871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9358872,GSE313006,GSE313006,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,COPD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,316562,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000019324916258,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358872,,,train,sda-all,samples/GSE313006/GSM9358872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9358873,GSE313006,GSE313006,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,COPD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,269706,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999889777202986,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358873,,,train,sda-all,samples/GSE313006/GSM9358873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9358874,GSE313006,GSE313006,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,COPD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,219246,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999039253362615,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358874,,,train,sda-all,samples/GSE313006/GSM9358874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360613,GSE313081,GSE313081,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0021117;MONDO:0004992;MONDO:0005105,lung neoplasm;cancer;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mLung_300g,xenium-3.2.0.7,cell,426641,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499998850521863,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360613,,,train,sda-all,samples/GSE313081/GSM9360613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360614,GSE313081,GSE313081,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0021117;MONDO:0004992;MONDO:0005105,lung neoplasm;cancer;melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mLung_300g,xenium-3.2.0.7,cell,517413,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999982760205957,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360614,,,train,sda-all,samples/GSE313081/GSM9360614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360615,GSE313081,GSE313081,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0021117;MONDO:0004970,lung neoplasm;adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mLung_100g,xenium-3.0.0.15,cell,876258,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000021781746896,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360615,,,train,sda-all,samples/GSE313081/GSM9360615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360616,GSE313081,GSE313081,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0021117;MONDO:0004970,lung neoplasm;adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mLung_100g,xenium-3.0.0.15,cell,678432,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956440301433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360616,,,train,sda-all,samples/GSE313081/GSM9360616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9366444,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,14 dpa,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6072,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366444,,,train,sda-all,samples/GSE313338/GSM9366444,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.56, ""life_stage"": 0.58}",uberon;life_stage,low_confidence_annotation
GSM9366445,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,14 dpa,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10349,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999879526366515,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366445,,,train,sda-all,samples/GSE313338/GSM9366445,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.81, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9366446,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,14 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13102,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997500000000006,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366446,,,train,sda-all,samples/GSE313338/GSM9366446,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.78, ""life_stage"": 0.93}",,
GSM9366447,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,14 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7375,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000255990169977,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366447,,,train,sda-all,samples/GSE313338/GSM9366447,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 0.77}",,
GSM9366448,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,14 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7703,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997619695320994,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366448,,,train,sda-all,samples/GSE313338/GSM9366448,sda-tissue-disease-2.4,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.79, ""life_stage"": 0.71}",,
GSM9366449,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,14 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,36333,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500002876472754,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366449,,,train,sda-all,samples/GSE313338/GSM9366449,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.58, ""life_stage"": 0.63}",uberon,low_confidence_annotation
GSM9366450,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1951,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998354180381827,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366450,,,train,sda-all,samples/GSE313338/GSM9366450,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.77, ""life_stage"": 0.78}",,
GSM9366451,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2125,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996592148309704,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366451,,,train,sda-all,samples/GSE313338/GSM9366451,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 0.92}",,
GSM9366452,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2170,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000408719346049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366452,,,train,sda-all,samples/GSE313338/GSM9366452,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM9366453,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2290,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000578703703704,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366453,,,train,sda-all,samples/GSE313338/GSM9366453,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.87, ""life_stage"": 0.88}",,
GSM9366454,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1742,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948644207067,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366454,,,train,sda-all,samples/GSE313338/GSM9366454,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.77, ""life_stage"": 0.89}",,
GSM9366455,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1698,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000256884504727,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366455,,,train,sda-all,samples/GSE313338/GSM9366455,sda-tissue-disease-2.4,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.68, ""life_stage"": 0.8}",,
GSM9366456,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2244,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000238549618321,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366456,,,train,sda-all,samples/GSE313338/GSM9366456,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.65, ""life_stage"": 0.65}",,
GSM9366457,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2287,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999666118758989,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366457,,,train,sda-all,samples/GSE313338/GSM9366457,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.8, ""life_stage"": 0.77}",,
GSM9366458,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,7 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46032,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000023044660552,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366458,,,train,sda-all,samples/GSE313338/GSM9366458,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.73, ""life_stage"": 0.91}",,
GSM9366459,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,10 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38930,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366459,,,train,sda-all,samples/GSE313338/GSM9366459,sda-tissue-disease-2.4,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.72, ""life_stage"": 0.81}",,
GSM9366460,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,10 dpa,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,25364,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999840357598978,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366460,,,train,sda-all,samples/GSE313338/GSM9366460,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.87, ""life_stage"": 0.89}",,
GSM9366461,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,mature,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6240,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000370919881306,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366461,,,train,sda-all,samples/GSE313338/GSM9366461,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.55, ""life_stage"": 0.56}",uberon;life_stage,low_confidence_annotation
GSM9366462,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,mature,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11342,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998455041713874,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366462,,,train,sda-all,samples/GSE313338/GSM9366462,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.77, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9366463,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,mature,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10770,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000029373751615,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366463,,,train,sda-all,samples/GSE313338/GSM9366463,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.55, ""life_stage"": 0.59}",uberon;life_stage,low_confidence_annotation
GSM9366464,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,mature,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6880,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366464,,,train,sda-all,samples/GSE313338/GSM9366464,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.59, ""life_stage"": 0.51}",uberon;life_stage,low_confidence_annotation
GSM9366465,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,skeletal muscle,luna,UBERON:0003082,myotome,Tail 5 myotome post amputation,primary tissue,,,perturbation,luna,,mature,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,46943,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999926843542723,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366465,,,train,sda-all,samples/GSE313338/GSM9366465,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.78, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9366466,GSE313338,GSE313338,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,embryo (whole),luna,UBERON:0000922,embryo,whole_embryo,whole embryo/organism,,,normal,luna,,embryo,embryonic,luna,embryonic,,unknown,not stated,,,,fresh frozen,fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,3114,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998782151208104,VERIFIED,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9366466,,,train,sda-all,samples/GSE313338/GSM9366466,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.43, ""uberon"": 0.45, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9366858,GSE313353,GSE313353,Intestinal BMP SMADs impart the mid-villus pattern via direct targeting of villus zonation genes and by controlling a transcription factor hierarchy [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002115,jejunum,Jejunum of small intestine,primary tissue,,,perturbation,luna,,tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,300700,19059,counts,um,1.0,verified,True,H&E-like (heuristic),4.322969879576025,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9366858,,,train,sda-all,samples/GSE313353/GSM9366858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9367517,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:149,149,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2939,32285,counts,pixel,4.143864679945749,platform_constant,True,H&E,4.143864679945749,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367517,,,train,hesrt,samples/GSE313407/GSM9367517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9367518,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:147,147,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3027,32285,counts,pixel,4.142214835346103,platform_constant,True,H&E,4.142214835346103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367518,,,train,hesrt,samples/GSE313407/GSM9367518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9367519,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Sham_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:150,150,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1866,32285,counts,pixel,4.146064642814383,platform_constant,True,H&E,4.146064642814383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367519,,,train,hesrt,samples/GSE313407/GSM9367519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9367520,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:142,142,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2824,32285,counts,pixel,4.141665023096038,platform_constant,True,H&E,4.141665023096038,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367520,,,train,hesrt,samples/GSE313407/GSM9367520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9367521,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:140,140,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2990,32285,counts,pixel,4.177411389125443,platform_constant,True,H&E,4.177411389125443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367521,,,train,hesrt,samples/GSE313407/GSM9367521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9367522,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Sham_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:141,141,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2546,32285,counts,pixel,4.177961370428271,platform_constant,True,H&E,4.177961370428271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367522,,,train,hesrt,samples/GSE313407/GSM9367522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9367523,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Sham_None_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:143,143,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2288,32285,counts,pixel,4.177961370428271,platform_constant,True,H&E,4.177961370428271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367523,,,train,hesrt,samples/GSE313407/GSM9367523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9367524,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Sham_None_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:184,184,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2724,32285,counts,pixel,4.218889131053135,platform_constant,True,H&E,4.218889131053135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367524,,,train,hesrt,samples/GSE313407/GSM9367524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9367525,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:177,177,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3258,32285,counts,pixel,4.32566374622867,platform_constant,True,H&E,4.32566374622867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367525,,,train,hesrt,samples/GSE313407/GSM9367525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9367526,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:181,181,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2294,32285,counts,pixel,4.16681401389106,platform_constant,True,H&E,4.16681401389106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367526,,,train,hesrt,samples/GSE313407/GSM9367526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9367527,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_None_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:176,176,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2514,32285,counts,pixel,4.325936731858362,platform_constant,True,H&E,4.325936731858362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367527,,,train,hesrt,samples/GSE313407/GSM9367527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.86}",,
GSM9367528,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Sham_None_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:182,182,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2602,32285,counts,pixel,4.167536048583823,platform_constant,True,H&E,4.167536048583823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367528,,,train,hesrt,samples/GSE313407/GSM9367528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9367529,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Sham_None_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:183,183,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2345,32285,counts,pixel,4.1670935064702075,platform_constant,True,H&E,4.1670935064702075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367529,,,train,hesrt,samples/GSE313407/GSM9367529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9367530,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:223,223,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2732,32285,counts,pixel,4.325936731858362,platform_constant,True,H&E,4.325936731858362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367530,,,train,hesrt,samples/GSE313407/GSM9367530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM9367531,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:224,224,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2620,32285,counts,pixel,4.328318715824808,platform_constant,True,H&E,4.328318715824808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367531,,,train,hesrt,samples/GSE313407/GSM9367531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM9367532,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:206,206,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2858,32285,counts,pixel,4.168863257100049,platform_constant,True,H&E,4.168863257100049,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367532,,,train,hesrt,samples/GSE313407/GSM9367532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9367533,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:213,213,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2916,32285,counts,pixel,4.169748205043665,platform_constant,True,H&E,4.169748205043665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367533,,,train,hesrt,samples/GSE313407/GSM9367533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 0.81}",,
GSM9367534,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:225,225,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2230,32285,counts,pixel,4.168420825796282,platform_constant,True,H&E,4.168420825796282,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367534,,,train,hesrt,samples/GSE313407/GSM9367534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.84}",,
GSM9367535,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:235,235,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2749,32285,counts,pixel,4.330973555184158,platform_constant,True,H&E,4.330973555184158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367535,,,train,hesrt,samples/GSE313407/GSM9367535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM9367536,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:236,236,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2499,32285,counts,pixel,4.200442374797255,platform_constant,True,H&E,4.200442374797255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367536,,,train,hesrt,samples/GSE313407/GSM9367536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9367537,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:245,245,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3136,32285,counts,pixel,4.167699234990608,platform_constant,True,H&E,4.167699234990608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367537,,,train,hesrt,samples/GSE313407/GSM9367537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM9367538,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:244,244,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2449,32285,counts,pixel,4.168584046847946,platform_constant,True,H&E,4.168584046847946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367538,,,train,hesrt,samples/GSE313407/GSM9367538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9367539,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:243_2,243_2,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2844,32285,counts,pixel,4.166650862145119,platform_constant,True,H&E,4.166650862145119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367539,,,train,hesrt,samples/GSE313407/GSM9367539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9367540,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:237,237,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2810,32285,counts,pixel,4.327706642279503,platform_constant,True,H&E,4.327706642279503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367540,,,train,hesrt,samples/GSE313407/GSM9367540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9367541,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:239,239,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2459,32285,counts,pixel,4.167536048583823,platform_constant,True,H&E,4.167536048583823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367541,,,train,hesrt,samples/GSE313407/GSM9367541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.9500000000000001}",,
GSM9367542,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:248,248,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2706,32285,counts,pixel,4.169469038035548,platform_constant,True,H&E,4.169469038035548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367542,,,train,hesrt,samples/GSE313407/GSM9367542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9367543,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:249,249,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2750,32285,counts,pixel,4.167978488390885,platform_constant,True,H&E,4.167978488390885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367543,,,train,hesrt,samples/GSE313407/GSM9367543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9367544,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:247,247,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2635,32285,counts,pixel,4.1685840468479265,platform_constant,True,H&E,4.1685840468479265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367544,,,train,hesrt,samples/GSE313407/GSM9367544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM9367545,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:256,256,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2730,32285,counts,pixel,4.166650862145138,platform_constant,True,H&E,4.166650862145138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367545,,,train,hesrt,samples/GSE313407/GSM9367545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9367546,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:263,263,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2660,32285,counts,pixel,4.323451329292707,platform_constant,True,H&E,4.323451329292707,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367546,,,train,hesrt,samples/GSE313407/GSM9367546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9367547,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:264,264,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2717,32285,counts,pixel,4.323893885128808,platform_constant,True,H&E,4.323893885128808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367547,,,train,hesrt,samples/GSE313407/GSM9367547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9367548,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:266,266,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2999,32285,counts,pixel,4.166371642418682,platform_constant,True,H&E,4.166371642418682,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367548,,,train,hesrt,samples/GSE313407/GSM9367548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9367549,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_GR_2DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:262,262,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2844,32285,counts,pixel,4.322566489341676,platform_constant,True,H&E,4.322566489341676,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367549,,,train,hesrt,samples/GSE313407/GSM9367549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM9367550,GSE313407,GSE313407,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,CCI,CCI_Ctrl_7DPI,adult,age rule: age with unit,not stated,15–20 weeks,unknown,not stated,,GSE313407:211,211,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2741,32285,counts,pixel,4.327264134713492,platform_constant,True,H&E,4.327264134713492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367550,,,train,hesrt,samples/GSE313407/GSM9367550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.96, ""life_stage"": 0.9500000000000001}",,
GSM9368374,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1871,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.764768642914155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368374,,,train,sda-all,samples/GSE313471/GSM9368374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.42, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9368375,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1814,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.170825924784631,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368375,,,train,sda-all,samples/GSE313471/GSM9368375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9368376,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1833,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.936952726128304,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368376,,,train,sda-all,samples/GSE313471/GSM9368376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.39, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9368377,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,cell culture,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2102,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.155166401927711,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368377,,,train,sda-all,samples/GSE313471/GSM9368377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9368378,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1941,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.301593770849303,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368378,,,train,sda-all,samples/GSE313471/GSM9368378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9368379,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,cell culture,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2008,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.0496465629193725,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368379,,,train,sda-all,samples/GSE313471/GSM9368379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9368380,GSE313471,GSE313471,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,cell culture,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1712,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8728710219334697,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368380,,,train,sda-all,samples/GSE313471/GSM9368380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9369728,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,731,22000,counts,um,1.0,verified,True,H&E,4.264170854536493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369728,,,train,sda-all,samples/GSE313530/GSM9369728,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9369729,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,596,22000,counts,um,1.0,verified,True,H&E,4.264311195832739,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369729,,,train,sda-all,samples/GSE313530/GSM9369729,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9369730,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1013,22000,counts,um,1.0,verified,True,H&E,4.238912935715556,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369730,,,train,sda-all,samples/GSE313530/GSM9369730,sda-tissue-disease-2.4,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369731,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1457,22000,counts,um,1.0,verified,True,H&E,4.312356557264456,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369731,,,train,sda-all,samples/GSE313530/GSM9369731,sda-tissue-disease-2.4,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369732,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1619,22000,counts,um,1.0,verified,True,H&E,4.264201471049344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369732,,,train,sda-all,samples/GSE313530/GSM9369732,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9369733,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1617,22000,counts,um,1.0,verified,True,H&E,4.264268807288295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369733,,,train,sda-all,samples/GSE313530/GSM9369733,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9369734,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1212,22000,counts,um,1.0,verified,True,H&E,4.312936082131381,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369734,,,train,sda-all,samples/GSE313530/GSM9369734,sda-tissue-disease-2.4,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369735,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1458,22000,counts,um,1.0,verified,True,H&E,4.312188978138357,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369735,,,train,sda-all,samples/GSE313530/GSM9369735,sda-tissue-disease-2.4,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9369736,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1242,22000,counts,um,1.0,verified,True,H&E,4.100905706187213,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369736,,,train,sda-all,samples/GSE313530/GSM9369736,sda-tissue-disease-2.4,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369737,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2587,22000,counts,um,1.0,verified,True,H&E,4.099681427122882,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369737,,,train,sda-all,samples/GSE313530/GSM9369737,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369738,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1430,22000,counts,um,1.0,verified,True,H&E,4.101271254029082,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369738,,,train,sda-all,samples/GSE313530/GSM9369738,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369739,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1777,22000,counts,um,1.0,verified,True,H&E,4.100155321459233,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369739,,,train,sda-all,samples/GSE313530/GSM9369739,sda-tissue-disease-2.4,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369740,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2171,22000,counts,um,1.0,verified,True,H&E,4.08535352945828,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369740,,,train,sda-all,samples/GSE313530/GSM9369740,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369741,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2092,22000,counts,um,1.0,verified,True,H&E,4.08454301024371,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369741,,,train,sda-all,samples/GSE313530/GSM9369741,sda-tissue-disease-2.4,"{""organ"": 0.77, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369742,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2077,22000,counts,um,1.0,verified,True,H&E,4.0849607252421665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369742,,,train,sda-all,samples/GSE313530/GSM9369742,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369743,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,895,22000,counts,um,1.0,verified,True,H&E,4.084327046602387,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369743,,,train,sda-all,samples/GSE313530/GSM9369743,sda-tissue-disease-2.4,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369744,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Papio anubis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2258,20842,counts,um,1.0,verified,True,H&E,4.066693913351573,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369744,,,train,sda-all,samples/GSE313530/GSM9369744,sda-tissue-disease-2.4,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9369745,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Papio anubis,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3119,20842,counts,um,1.0,verified,True,H&E,4.066194509313726,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369745,,,train,sda-all,samples/GSE313530/GSM9369745,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9369746,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Papio anubis,9555,olive baboon,Papio anubis,9555,,False,False,GEO organism field,Papio anubis,Macaca mulatta,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3036,21369,counts,um,1.0,verified,True,H&E,4.066483841163155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369746,,,train,sda-all,samples/GSE313530/GSM9369746,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9369747,GSE313530,GSE313530,Spatial transcriptomics dataset of non-human primates,Papio anubis,9555,olive baboon,Papio anubis,9555,,False,False,GEO organism field,Papio anubis,Macaca mulatta,peripheral nerve,luna,UBERON:0000044,dorsal root ganglion,dorsal root ganglia,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2642,21369,counts,um,1.0,verified,True,H&E,4.066455813520429,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369747,,,train,sda-all,samples/GSE313530/GSM9369747,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9371392,GSE313636,GSE313636,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002116,ileum,mouse small intestine ileum,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,7.5 weeks,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,280789,13752,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948334907889,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371392,,,test,sda-all,samples/GSE313636/GSM9371392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9371393,GSE313636,GSE313636,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002116,ileum,mouse small intestine ileum,primary tissue,,,normal,luna,,,adult,age rule: age with unit,juvenile,7.5 weeks,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,169251,13570,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000196037969459,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371393,,,test,sda-all,samples/GSE313636/GSM9371393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9371394,GSE313636,GSE313636,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002116,ileum,mouse small intestine ileum,primary tissue,MONDO:0007024,Yersinia pseudotuberculosis infectious disease,disease,luna,,Yersinia pseudotuberculosis,adult,age rule: age with unit,juvenile,7.5 weeks,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,274361,13769,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999913977014658,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371394,,,test,sda-all,samples/GSE313636/GSM9371394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9371395,GSE313636,GSE313636,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002116,ileum,mouse small intestine ileum,primary tissue,MONDO:0007024,Yersinia pseudotuberculosis infectious disease,disease,luna,,Yersinia pseudotuberculosis,adult,age rule: age with unit,juvenile,7.5 weeks,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,204033,13727,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000071665180277,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371395,,,test,sda-all,samples/GSE313636/GSM9371395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372001,GSE313662,GSE313662,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,95675,9656,counts,um,1.0,verified,True,fluorescence: DAPI,0.499993795499669,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372001,,,train,sda-all,samples/GSE313662/GSM9372001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372002,GSE313662,GSE313662,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,169765,9656,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999976998803938,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372002,,,train,sda-all,samples/GSE313662/GSM9372002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372003,GSE313662,GSE313662,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,133272,9656,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048671274214,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372003,,,train,sda-all,samples/GSE313662/GSM9372003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372004,GSE313662,GSE313662,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,181033,9656,counts,um,1.0,verified,True,fluorescence: DAPI,0.500003810477725,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372004,,,train,sda-all,samples/GSE313662/GSM9372004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372005,GSE313662,GSE313662,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,238408,9656,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011492139377,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372005,,,train,sda-all,samples/GSE313662/GSM9372005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372006,GSE313662,GSE313662,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreatic adenocarcinoma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,159670,9656,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048671274214,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372006,,,train,sda-all,samples/GSE313662/GSM9372006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372543,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3698,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.175395199567525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372543,,,train,sda-all,samples/GSE313694/GSM9372543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9372544,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3054,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.2192323628514865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372544,,,train,sda-all,samples/GSE313694/GSM9372544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372545,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2302,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.040612423173297,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372545,,,train,sda-all,samples/GSE313694/GSM9372545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372546,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3493,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.2867854899464835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372546,,,train,sda-all,samples/GSE313694/GSM9372546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372547,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3985,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.157346838373332,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372547,,,train,sda-all,samples/GSE313694/GSM9372547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372548,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4309,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.2729320208546735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372548,,,train,sda-all,samples/GSE313694/GSM9372548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372549,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3802,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.26400534128472,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372549,,,train,sda-all,samples/GSE313694/GSM9372549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372550,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1723,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.149157566443168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372550,,,train,sda-all,samples/GSE313694/GSM9372550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372551,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2105,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.11644484571292,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372551,,,train,sda-all,samples/GSE313694/GSM9372551,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9372552,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2397,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.5237822752205625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372552,,,train,sda-all,samples/GSE313694/GSM9372552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372553,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3430,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.098190487493853,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372553,,,train,sda-all,samples/GSE313694/GSM9372553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372554,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2635,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.018373259813249,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372554,,,train,sda-all,samples/GSE313694/GSM9372554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372555,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3676,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.05218859400802,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372555,,,train,sda-all,samples/GSE313694/GSM9372555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372556,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3619,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.1786838494652185,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372556,,,train,sda-all,samples/GSE313694/GSM9372556,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372557,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2491,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.115511010879454,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372557,,,train,sda-all,samples/GSE313694/GSM9372557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372558,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2156,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.351215911653794,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372558,,,train,sda-all,samples/GSE313694/GSM9372558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372559,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,428,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.473940379673687,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372559,,,train,sda-all,samples/GSE313694/GSM9372559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372560,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3105,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.491234989183572,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372560,,,train,sda-all,samples/GSE313694/GSM9372560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9372561,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1518,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.650267897590885,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks off; check whether it is H&E,41663806,,GSM9372561,,,train,sda-all,samples/GSE313694/GSM9372561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372562,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3751,36945,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.135570428079463,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372562,,,train,sda-all,samples/GSE313694/GSM9372562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372563,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11713,37082,counts,um,1.0,verified,True,H&E-like (heuristic),8.392331364970364,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372563,,,train,sda-all,samples/GSE313694/GSM9372563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372564,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9303,37082,counts,um,1.0,verified,True,H&E-like (heuristic),8.122254313409469,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372564,,,train,sda-all,samples/GSE313694/GSM9372564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372565,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8458,37082,counts,um,1.0,verified,True,H&E-like (heuristic),9.798943841105363,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372565,,,train,sda-all,samples/GSE313694/GSM9372565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372566,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5422,37082,counts,um,1.0,verified,True,H&E-like (heuristic),8.108547110779067,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372566,,,train,sda-all,samples/GSE313694/GSM9372566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372567,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10195,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.191881460301188,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372567,,,train,sda-all,samples/GSE313694/GSM9372567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372568,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9062,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.5584263079215335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372568,,,train,sda-all,samples/GSE313694/GSM9372568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372569,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8745,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.338722548571736,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372569,,,train,sda-all,samples/GSE313694/GSM9372569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372570,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9589,37082,counts,um,1.0,verified,True,H&E-like (heuristic),7.868280656388722,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372570,,,train,sda-all,samples/GSE313694/GSM9372570,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372571,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10201,37082,counts,um,1.0,verified,True,H&E-like (heuristic),10.493769731502555,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,41663806,,GSM9372571,,,train,sda-all,samples/GSE313694/GSM9372571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372572,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11314,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.743186204194192,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372572,,,train,sda-all,samples/GSE313694/GSM9372572,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372573,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9285,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.0862985251214,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372573,,,train,sda-all,samples/GSE313694/GSM9372573,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372574,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6515,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.371688870454235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372574,,,train,sda-all,samples/GSE313694/GSM9372574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372575,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7182,37082,counts,um,1.0,verified,True,H&E-like (heuristic),5.694822539947798,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372575,,,train,sda-all,samples/GSE313694/GSM9372575,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372576,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8732,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.303107836127953,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372576,,,train,sda-all,samples/GSE313694/GSM9372576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372577,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7424,37082,counts,um,1.0,verified,True,H&E-like (heuristic),8.028026660909045,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372577,,,train,sda-all,samples/GSE313694/GSM9372577,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372578,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5764,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.823758084923756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372578,,,train,sda-all,samples/GSE313694/GSM9372578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372579,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10651,37082,counts,um,1.0,verified,True,blue bright-field stain (heuristic),6.660900535296722,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372579,,,train,sda-all,samples/GSE313694/GSM9372579,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372580,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9868,37082,counts,um,1.0,verified,True,H&E-like (heuristic),7.535233504341457,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372580,,,train,sda-all,samples/GSE313694/GSM9372580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372581,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7997,37082,counts,um,1.0,verified,True,H&E-like (heuristic),5.835521862860679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372581,,,train,sda-all,samples/GSE313694/GSM9372581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372582,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5613,37082,counts,um,1.0,verified,True,H&E-like (heuristic),5.972742431729292,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),41663806,,GSM9372582,,,train,sda-all,samples/GSE313694/GSM9372582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372583,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7453,37082,counts,um,1.0,verified,True,H&E-like (heuristic),6.420027149678112,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),41663806,,GSM9372583,,,train,sda-all,samples/GSE313694/GSM9372583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372584,GSE313694,GSE313694,Spatial transcriptomic profiling (Visium) of meningioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,meninges,luna,UBERON:0002360,meninx,Meningioma,tumour tissue,MONDO:0016642,meningioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7632,37082,counts,um,1.0,verified,True,H&E-like (heuristic),8.196898137594966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),41663806,,GSM9372584,,,train,sda-all,samples/GSE313694/GSM9372584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372711,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,988,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372711,,,train,sda-all,samples/GSE313700/GSM9372711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372712,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1930,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372712,,,train,sda-all,samples/GSE313700/GSM9372712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372713,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1197,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372713,,,train,sda-all,samples/GSE313700/GSM9372713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372714,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2203,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372714,,,train,sda-all,samples/GSE313700/GSM9372714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372715,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1215,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372715,,,train,sda-all,samples/GSE313700/GSM9372715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372716,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2131,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372716,,,train,sda-all,samples/GSE313700/GSM9372716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372717,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1922,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372717,,,train,sda-all,samples/GSE313700/GSM9372717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372718,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1222,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372718,,,train,sda-all,samples/GSE313700/GSM9372718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9372719,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1310,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372719,,,train,sda-all,samples/GSE313700/GSM9372719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372720,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1791,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372720,,,train,sda-all,samples/GSE313700/GSM9372720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372721,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1862,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372721,,,train,sda-all,samples/GSE313700/GSM9372721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372722,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2248,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372722,,,train,sda-all,samples/GSE313700/GSM9372722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372723,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2084,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372723,,,train,sda-all,samples/GSE313700/GSM9372723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372724,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1662,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372724,,,train,sda-all,samples/GSE313700/GSM9372724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372725,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1602,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372725,,,train,sda-all,samples/GSE313700/GSM9372725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372726,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1720,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372726,,,train,sda-all,samples/GSE313700/GSM9372726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372727,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,740,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372727,,,train,sda-all,samples/GSE313700/GSM9372727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372728,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,799,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372728,,,train,sda-all,samples/GSE313700/GSM9372728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372729,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,801,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372729,,,train,sda-all,samples/GSE313700/GSM9372729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372730,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,708,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372730,,,train,sda-all,samples/GSE313700/GSM9372730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372731,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,823,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372731,,,train,sda-all,samples/GSE313700/GSM9372731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372732,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,861,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372732,,,train,sda-all,samples/GSE313700/GSM9372732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372733,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,817,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372733,,,train,sda-all,samples/GSE313700/GSM9372733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372734,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,871,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372734,,,train,sda-all,samples/GSE313700/GSM9372734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372735,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,968,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372735,,,train,sda-all,samples/GSE313700/GSM9372735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372736,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1012,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372736,,,train,sda-all,samples/GSE313700/GSM9372736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372737,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1011,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372737,,,train,sda-all,samples/GSE313700/GSM9372737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372738,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,968,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372738,,,train,sda-all,samples/GSE313700/GSM9372738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372739,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,979,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372739,,,train,sda-all,samples/GSE313700/GSM9372739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372740,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1012,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372740,,,train,sda-all,samples/GSE313700/GSM9372740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372741,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2012,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372741,,,train,sda-all,samples/GSE313700/GSM9372741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372742,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1472,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372742,,,train,sda-all,samples/GSE313700/GSM9372742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372743,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2998,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372743,,,train,sda-all,samples/GSE313700/GSM9372743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372744,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1113,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372744,,,train,sda-all,samples/GSE313700/GSM9372744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372745,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1995,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372745,,,train,sda-all,samples/GSE313700/GSM9372745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372746,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1058,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372746,,,train,sda-all,samples/GSE313700/GSM9372746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372747,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2936,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372747,,,train,sda-all,samples/GSE313700/GSM9372747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372748,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3188,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372748,,,train,sda-all,samples/GSE313700/GSM9372748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372749,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3130,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372749,,,train,sda-all,samples/GSE313700/GSM9372749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372750,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Abnormal,Stat1KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2594,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372750,,,train,sda-all,samples/GSE313700/GSM9372750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372751,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,891,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372751,,,train,sda-all,samples/GSE313700/GSM9372751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372752,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,897,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372752,,,train,sda-all,samples/GSE313700/GSM9372752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372753,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,901,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372753,,,train,sda-all,samples/GSE313700/GSM9372753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372754,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,888,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372754,,,train,sda-all,samples/GSE313700/GSM9372754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372755,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,994,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372755,,,train,sda-all,samples/GSE313700/GSM9372755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372756,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,849,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372756,,,train,sda-all,samples/GSE313700/GSM9372756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372757,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1225,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372757,,,train,sda-all,samples/GSE313700/GSM9372757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372758,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,959,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372758,,,train,sda-all,samples/GSE313700/GSM9372758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372759,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,901,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372759,,,train,sda-all,samples/GSE313700/GSM9372759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372760,GSE313700,GSE313700,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,Normal,Rosa26KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,892,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372760,,,train,sda-all,samples/GSE313700/GSM9372760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372788,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Untreated,aged,age rule: age with unit,aged,24 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,140698,550,unknown,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9372788,,,train,sda-all,samples/GSE313704/GSM9372788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372789,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Untreated,adult,age rule: age with unit,adult,6 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,73904,550,unknown,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9372789,,,train,sda-all,samples/GSE313704/GSM9372789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372790,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Untreated,aged,age rule: age with unit,aged,24 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,163186,550,unknown,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372790,,,train,sda-all,samples/GSE313704/GSM9372790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372791,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Untreated,adult,age rule: age with unit,adult,6 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,177494,550,unknown,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372791,,,train,sda-all,samples/GSE313704/GSM9372791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372792,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,MONDO:0002691,liver cancer,disease,mondo_predicate (Luna: perturbation),,AAV+Myc,aged,age rule: age with unit,aged,24 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,54197,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372792,,,train,sda-all,samples/GSE313704/GSM9372792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372793,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,AAV+mApple,adult,age rule: age with unit,adult,6 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,237950,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372793,,,train,sda-all,samples/GSE313704/GSM9372793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372794,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,MONDO:0002691,liver cancer,disease,mondo_predicate (Luna: perturbation),,AAV+Myc,adult,age rule: age with unit,adult,6 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,243863,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372794,,,train,sda-all,samples/GSE313704/GSM9372794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372795,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,AAV+mApple,adult,age rule: age with unit,adult,6 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,105825,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372795,,,train,sda-all,samples/GSE313704/GSM9372795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372796,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,MONDO:0002691,liver cancer,disease,mondo_predicate (Luna: perturbation),,AAV+Myc,aged,age rule: age with unit,aged,24 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,114324,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9372796,,,train,sda-all,samples/GSE313704/GSM9372796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372797,GSE313704,GSE313704,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,MONDO:0002691,liver cancer,disease,mondo_predicate (Luna: perturbation),,AAV+Myc,adult,age rule: age with unit,adult,6 months,male,extracted field,Male,,,fresh frozen,fresh-frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,141524,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372797,,,train,sda-all,samples/GSE313704/GSM9372797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9375928,GSE313808,GSE313808,"High resolution mapping of human skin chronic wound tissues biofilm infected using integrated single-cell, spatial and in situ analysis [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,,,disease,luna,chronic wound skin,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hmxskin_470g,xenium-3.2.0.7,cell,21046,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999708624708625,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9375928,,,val,sda-all,samples/GSE313808/GSM9375928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9375929,GSE313808,GSE313808,"High resolution mapping of human skin chronic wound tissues biofilm infected using integrated single-cell, spatial and in situ analysis [Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,,primary tissue,,,disease,luna,chronic wound skin,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hmxskin_470g,xenium-3.2.0.7,cell,32254,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000349162011173,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9375929,,,val,sda-all,samples/GSE313808/GSM9375929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9376204,GSE313828,GSE313828,Spatial transcriptomics of MRGPRX4-driven melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,dorsal skin,primary tissue,MONDO:0005105,melanoma,disease,luna,,tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,462,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.101629401668687,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9376204,,,train,sda-all,samples/GSE313828/GSM9376204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.55, ""uberon"": 0.38, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9376205,GSE313828,GSE313828,Spatial transcriptomics of MRGPRX4-driven melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,dorsal skin,primary tissue,MONDO:0005105,melanoma,disease,luna,,tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,498,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.023243905026211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9376205,,,train,sda-all,samples/GSE313828/GSM9376205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.39, ""uberon"": 0.46, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9376206,GSE313828,GSE313828,Spatial transcriptomics of MRGPRX4-driven melanoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,dorsal skin,primary tissue,MONDO:0005105,melanoma,disease,mondo_predicate (Luna: perturbation),,tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,386,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9831451106440317,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9376206,,,train,sda-all,samples/GSE313828/GSM9376206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.35000000000000003, ""uberon"": 0.38, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9376740,GSE313858,GSE313858,Spatial transcriptomic data from longitudinal tumor samples from one patient undergoing neoadjuvant BO-112 and hypofractionated radiation therapy in soft tissue carcoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,soft tissue sarcoma,"None (baseline T1, Cohort -2, batch 1)",not stated,luna,not stated,,unknown,not stated,,GSE313858:Patient 004,Patient 004,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,7915,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9376740,,,train,hesrt,samples/GSE313858/GSM9376740,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9376741,GSE313858,GSE313858,Spatial transcriptomic data from longitudinal tumor samples from one patient undergoing neoadjuvant BO-112 and hypofractionated radiation therapy in soft tissue carcoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,soft tissue sarcoma,"BO-112 (1 dose) (pre-RT T2, Cohort -2, batch 1)",not stated,luna,not stated,,unknown,not stated,,GSE313858:Patient 004,Patient 004,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,13427,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9376741,,,train,hesrt,samples/GSE313858/GSM9376741,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9376742,GSE313858,GSE313858,Spatial transcriptomic data from longitudinal tumor samples from one patient undergoing neoadjuvant BO-112 and hypofractionated radiation therapy in soft tissue carcoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0005070,neoplasm,disease,luna,soft tissue sarcoma,"Radiation (6 Gy x 5), BO-112 (2 doses) (post-RT T3, Cohort -2, batch 1)",not stated,luna,not stated,,unknown,not stated,,GSE313858:Patient 004,Patient 004,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,17060,18085,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9376742,,,train,hesrt,samples/GSE313858/GSM9376742,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9377774,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,51,male,extracted field,male,GSE313918:SD013/17,SD013/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3767,36601,counts,pixel,3.939046960370584,platform_constant,True,H&E,3.939046960370584,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377774,,,test,hesrt,samples/GSE313918/GSM9377774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377775,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,51,male,extracted field,male,GSE313918:SD013/17,SD013/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3290,36601,counts,pixel,3.925613353765105,platform_constant,True,H&E,3.925613353765105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377775,,,test,hesrt,samples/GSE313918/GSM9377775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377776,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,51,male,extracted field,male,GSE313918:SD013/17,SD013/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3352,36601,counts,pixel,3.8876460065730973,platform_constant,True,H&E,3.8876460065730973,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377776,,,test,hesrt,samples/GSE313918/GSM9377776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377777,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,51,male,extracted field,male,GSE313918:SD013/17,SD013/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3665,36601,counts,pixel,3.904023953163207,platform_constant,True,H&E,3.904023953163207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377777,,,test,hesrt,samples/GSE313918/GSM9377777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377778,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD016/10,SD016/10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4488,36601,counts,pixel,3.918254576071747,platform_constant,True,H&E,3.918254576071747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377778,,,test,hesrt,samples/GSE313918/GSM9377778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377779,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD016/10,SD016/10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4162,36601,counts,pixel,3.9235095633582238,platform_constant,True,H&E,3.9235095633582238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377779,,,test,hesrt,samples/GSE313918/GSM9377779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377780,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD016/10,SD016/10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4490,36601,counts,pixel,3.9291734325264094,platform_constant,True,H&E,3.9291734325264094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377780,,,test,hesrt,samples/GSE313918/GSM9377780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377781,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD016/10,SD016/10,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3996,36601,counts,pixel,3.954497043029661,platform_constant,True,H&E,3.954497043029661,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377781,,,test,hesrt,samples/GSE313918/GSM9377781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377782,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3553,36601,counts,pixel,3.9176340646506764,platform_constant,True,H&E,3.9176340646506764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377782,,,test,hesrt,samples/GSE313918/GSM9377782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377783,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4504,36601,counts,pixel,3.946682190711057,platform_constant,True,H&E,3.946682190711057,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377783,,,test,hesrt,samples/GSE313918/GSM9377783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377784,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4217,36601,counts,pixel,3.9480843334604043,platform_constant,True,H&E,3.9480843334604043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377784,,,test,hesrt,samples/GSE313918/GSM9377784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377785,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4315,36601,counts,pixel,3.9134147723990655,platform_constant,True,H&E,3.9134147723990655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377785,,,test,hesrt,samples/GSE313918/GSM9377785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377786,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4239,36601,counts,pixel,3.851657905598814,platform_constant,True,H&E,3.851657905598814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377786,,,test,hesrt,samples/GSE313918/GSM9377786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377787,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3564,36601,counts,pixel,3.8536935581647933,platform_constant,True,H&E,3.8536935581647933,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377787,,,test,hesrt,samples/GSE313918/GSM9377787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377788,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4784,36601,counts,pixel,3.86974050435398,platform_constant,True,H&E,3.86974050435398,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377788,,,test,hesrt,samples/GSE313918/GSM9377788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377789,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4908,36601,counts,pixel,3.8725312469404702,platform_constant,True,H&E,3.8725312469404702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377789,,,test,hesrt,samples/GSE313918/GSM9377789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377790,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4104,36601,counts,pixel,3.8709387799914072,platform_constant,True,H&E,3.8709387799914072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377790,,,test,hesrt,samples/GSE313918/GSM9377790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377791,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3385,36601,counts,pixel,3.833175811459324,platform_constant,True,H&E,3.833175811459324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377791,,,test,hesrt,samples/GSE313918/GSM9377791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377792,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD032/16,SD032/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3553,36601,counts,pixel,3.8522325254242347,platform_constant,True,H&E,3.8522325254242347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377792,,,test,hesrt,samples/GSE313918/GSM9377792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377793,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD032/16,SD032/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4749,36601,counts,pixel,3.8174129457578725,platform_constant,True,H&E,3.8174129457578725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377793,,,test,hesrt,samples/GSE313918/GSM9377793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377794,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4550,36601,counts,pixel,3.8757290213577575,platform_constant,True,H&E,3.8757290213577575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377794,,,test,hesrt,samples/GSE313918/GSM9377794,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377795,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4151,36601,counts,pixel,3.8699373307704583,platform_constant,True,H&E,3.8699373307704583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377795,,,test,hesrt,samples/GSE313918/GSM9377795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377796,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4389,36601,counts,pixel,3.8648717531312435,platform_constant,True,H&E,3.8648717531312435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377796,,,test,hesrt,samples/GSE313918/GSM9377796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377797,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4550,36601,counts,pixel,3.8661275278778797,platform_constant,True,H&E,3.8661275278778797,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377797,,,test,hesrt,samples/GSE313918/GSM9377797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377798,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,66,female,extracted field,female,GSE313918:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3615,36601,counts,pixel,3.8832818470047825,platform_constant,True,H&E,3.8832818470047825,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377798,,,test,hesrt,samples/GSE313918/GSM9377798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377799,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,66,female,extracted field,female,GSE313918:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3854,36601,counts,pixel,3.8599502455677754,platform_constant,True,H&E,3.8599502455677754,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377799,,,test,hesrt,samples/GSE313918/GSM9377799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377800,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3754,36601,counts,pixel,3.8690897756532077,platform_constant,True,H&E,3.8690897756532077,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377800,,,test,hesrt,samples/GSE313918/GSM9377800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377801,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3597,36601,counts,pixel,3.8128343739498427,platform_constant,True,H&E,3.8128343739498427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377801,,,test,hesrt,samples/GSE313918/GSM9377801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377802,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD032/12,SD032/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4863,36601,counts,pixel,3.8711562131959303,platform_constant,True,H&E,3.8711562131959303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377802,,,test,hesrt,samples/GSE313918/GSM9377802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377803,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD032/12,SD032/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4516,36601,counts,pixel,3.854118062950984,platform_constant,True,H&E,3.854118062950984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377803,,,test,hesrt,samples/GSE313918/GSM9377803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377804,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4862,36601,counts,pixel,3.8635971337410595,platform_constant,True,H&E,3.8635971337410595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377804,,,test,hesrt,samples/GSE313918/GSM9377804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377805,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4829,36601,counts,pixel,3.8334008022939776,platform_constant,True,H&E,3.8334008022939776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377805,,,test,hesrt,samples/GSE313918/GSM9377805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377806,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4011,36601,counts,pixel,3.8728886463723997,platform_constant,True,H&E,3.8728886463723997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377806,,,test,hesrt,samples/GSE313918/GSM9377806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377807,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3898,36601,counts,pixel,3.88195546903982,platform_constant,True,H&E,3.88195546903982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377807,,,test,hesrt,samples/GSE313918/GSM9377807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377808,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,58,female,extracted field,female,GSE313918:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4608,36601,counts,pixel,3.853260114116427,platform_constant,True,H&E,3.853260114116427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377808,,,test,hesrt,samples/GSE313918/GSM9377808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377809,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,58,female,extracted field,female,GSE313918:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4513,36601,counts,pixel,3.8630444426336688,platform_constant,True,H&E,3.8630444426336688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377809,,,test,hesrt,samples/GSE313918/GSM9377809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377810,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4614,36601,counts,pixel,3.8549588408623396,platform_constant,True,H&E,3.8549588408623396,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377810,,,test,hesrt,samples/GSE313918/GSM9377810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9377811,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4533,36601,counts,pixel,3.8647268265921846,platform_constant,True,H&E,3.8647268265921846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377811,,,test,hesrt,samples/GSE313918/GSM9377811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377812,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4238,36601,counts,pixel,3.871460768472568,platform_constant,True,H&E,3.871460768472568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377812,,,test,hesrt,samples/GSE313918/GSM9377812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377813,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3557,36601,counts,pixel,3.8370920473216072,platform_constant,True,H&E,3.8370920473216072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377813,,,test,hesrt,samples/GSE313918/GSM9377813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377814,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2382,36601,counts,pixel,3.8746843455864393,platform_constant,True,H&E,3.8746843455864393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377814,,,test,hesrt,samples/GSE313918/GSM9377814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377815,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3355,36601,counts,pixel,3.8696624701339912,platform_constant,True,H&E,3.8696624701339912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377815,,,test,hesrt,samples/GSE313918/GSM9377815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377816,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4524,36601,counts,pixel,3.8483559738571107,platform_constant,True,H&E,3.8483559738571107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377816,,,test,hesrt,samples/GSE313918/GSM9377816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377817,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4940,36601,counts,pixel,3.85157870184496,platform_constant,True,H&E,3.85157870184496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377817,,,test,hesrt,samples/GSE313918/GSM9377817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377818,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE313918:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4215,36601,counts,pixel,3.8900884468687726,platform_constant,True,H&E,3.8900884468687726,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377818,,,test,hesrt,samples/GSE313918/GSM9377818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377819,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE313918:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3995,36601,counts,pixel,3.8896245322393868,platform_constant,True,H&E,3.8896245322393868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377819,,,test,hesrt,samples/GSE313918/GSM9377819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377820,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4906,36601,counts,pixel,3.9255384147071926,platform_constant,True,H&E,3.9255384147071926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377820,,,test,hesrt,samples/GSE313918/GSM9377820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377821,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3715,36601,counts,pixel,3.868594905528229,platform_constant,True,H&E,3.868594905528229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377821,,,test,hesrt,samples/GSE313918/GSM9377821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377822,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4822,36601,counts,pixel,3.8852786985418004,platform_constant,True,H&E,3.8852786985418004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377822,,,test,hesrt,samples/GSE313918/GSM9377822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377823,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4889,36601,counts,pixel,3.850546769472652,platform_constant,True,H&E,3.850546769472652,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377823,,,test,hesrt,samples/GSE313918/GSM9377823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377824,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4682,36601,counts,pixel,3.8630288823161,platform_constant,True,H&E,3.8630288823161,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377824,,,test,hesrt,samples/GSE313918/GSM9377824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9377825,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4248,36601,counts,pixel,3.846960759072081,platform_constant,True,H&E,3.846960759072081,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377825,,,test,hesrt,samples/GSE313918/GSM9377825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377826,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4173,36601,counts,pixel,3.851718070741293,platform_constant,True,H&E,3.851718070741293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377826,,,test,hesrt,samples/GSE313918/GSM9377826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377827,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD032/16,SD032/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4751,36601,counts,pixel,3.8369691859066846,platform_constant,True,H&E,3.8369691859066846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377827,,,test,hesrt,samples/GSE313918/GSM9377827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377828,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD032/16,SD032/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4777,36601,counts,pixel,3.850044948332677,platform_constant,True,H&E,3.850044948332677,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377828,,,test,hesrt,samples/GSE313918/GSM9377828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377829,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4143,36601,counts,pixel,3.8545683164236975,platform_constant,True,H&E,3.8545683164236975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377829,,,test,hesrt,samples/GSE313918/GSM9377829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377830,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4477,36601,counts,pixel,3.845694624182645,platform_constant,True,H&E,3.845694624182645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377830,,,test,hesrt,samples/GSE313918/GSM9377830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377831,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4526,36601,counts,pixel,3.8488675652538022,platform_constant,True,H&E,3.8488675652538022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377831,,,test,hesrt,samples/GSE313918/GSM9377831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377832,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4784,36601,counts,pixel,3.832905012357335,platform_constant,True,H&E,3.832905012357335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377832,,,test,hesrt,samples/GSE313918/GSM9377832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377833,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,66,female,extracted field,female,GSE313918:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3441,36601,counts,pixel,3.8934098387216074,platform_constant,True,H&E,3.8934098387216074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377833,,,test,hesrt,samples/GSE313918/GSM9377833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377834,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,66,female,extracted field,female,GSE313918:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3306,36601,counts,pixel,3.872144455374275,platform_constant,True,H&E,3.872144455374275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377834,,,test,hesrt,samples/GSE313918/GSM9377834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377835,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4176,36601,counts,pixel,3.8796727012663355,platform_constant,True,H&E,3.8796727012663355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377835,,,test,hesrt,samples/GSE313918/GSM9377835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377836,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4412,36601,counts,pixel,3.9124771374071354,platform_constant,True,H&E,3.9124771374071354,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377836,,,test,hesrt,samples/GSE313918/GSM9377836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377837,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD032/12,SD032/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4607,36601,counts,pixel,3.8662136690075326,platform_constant,True,H&E,3.8662136690075326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377837,,,test,hesrt,samples/GSE313918/GSM9377837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377838,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD032/12,SD032/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4581,36601,counts,pixel,3.883896049961605,platform_constant,True,H&E,3.883896049961605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377838,,,test,hesrt,samples/GSE313918/GSM9377838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377839,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4909,36601,counts,pixel,3.8660290877746712,platform_constant,True,H&E,3.8660290877746712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377839,,,test,hesrt,samples/GSE313918/GSM9377839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377840,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4774,36601,counts,pixel,3.86687668169045,platform_constant,True,H&E,3.86687668169045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377840,,,test,hesrt,samples/GSE313918/GSM9377840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377841,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4085,36601,counts,pixel,3.8608129304370618,platform_constant,True,H&E,3.8608129304370618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377841,,,test,hesrt,samples/GSE313918/GSM9377841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377842,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3263,36601,counts,pixel,3.8562494554094076,platform_constant,True,H&E,3.8562494554094076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377842,,,test,hesrt,samples/GSE313918/GSM9377842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377843,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,58,female,extracted field,female,GSE313918:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4062,36601,counts,pixel,3.854341178949003,platform_constant,True,H&E,3.854341178949003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377843,,,test,hesrt,samples/GSE313918/GSM9377843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377844,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,58,female,extracted field,female,GSE313918:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4988,36601,counts,pixel,3.877974743720206,platform_constant,True,H&E,3.877974743720206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377844,,,test,hesrt,samples/GSE313918/GSM9377844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377845,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2571,36601,counts,pixel,3.872950780521547,platform_constant,True,H&E,3.872950780521547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377845,,,test,hesrt,samples/GSE313918/GSM9377845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377846,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,66,male,extracted field,male,GSE313918:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3705,36601,counts,pixel,3.8603541506074115,platform_constant,True,H&E,3.8603541506074115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377846,,,test,hesrt,samples/GSE313918/GSM9377846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377847,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4598,36601,counts,pixel,3.855167439768347,platform_constant,True,H&E,3.855167439768347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377847,,,test,hesrt,samples/GSE313918/GSM9377847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377848,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD033/15,SD033/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4532,36601,counts,pixel,3.8560121572025037,platform_constant,True,H&E,3.8560121572025037,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377848,,,test,hesrt,samples/GSE313918/GSM9377848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377849,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD032/16,SD032/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3583,36601,counts,pixel,3.856840619937172,platform_constant,True,H&E,3.856840619937172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377849,,,test,hesrt,samples/GSE313918/GSM9377849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377850,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD032/16,SD032/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3507,36601,counts,pixel,3.864762328050569,platform_constant,True,H&E,3.864762328050569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377850,,,test,hesrt,samples/GSE313918/GSM9377850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377851,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3134,36601,counts,pixel,3.8568974167488403,platform_constant,True,H&E,3.8568974167488403,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377851,,,test,hesrt,samples/GSE313918/GSM9377851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377852,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,48,female,extracted field,female,GSE313918:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3189,36601,counts,pixel,3.872138738716417,platform_constant,True,H&E,3.872138738716417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377852,,,test,hesrt,samples/GSE313918/GSM9377852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377853,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4931,36601,counts,pixel,3.850450717264517,platform_constant,True,H&E,3.850450717264517,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377853,,,test,hesrt,samples/GSE313918/GSM9377853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377854,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,63,male,extracted field,male,GSE313918:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4299,36601,counts,pixel,3.838408716194233,platform_constant,True,H&E,3.838408716194233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377854,,,test,hesrt,samples/GSE313918/GSM9377854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377855,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE313918:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3627,36601,counts,pixel,3.8634710671506247,platform_constant,True,H&E,3.8634710671506247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377855,,,test,hesrt,samples/GSE313918/GSM9377855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377856,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3065,36601,counts,pixel,3.859243372928389,platform_constant,True,H&E,3.859243372928389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377856,,,test,hesrt,samples/GSE313918/GSM9377856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377857,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4260,36601,counts,pixel,3.853591057178849,platform_constant,True,H&E,3.853591057178849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377857,,,test,hesrt,samples/GSE313918/GSM9377857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377858,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,50,female,extracted field,female,GSE313918:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3841,36601,counts,pixel,3.845456521314276,platform_constant,True,H&E,3.845456521314276,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377858,,,test,hesrt,samples/GSE313918/GSM9377858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377859,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4378,36601,counts,pixel,3.8495362351415636,platform_constant,True,H&E,3.8495362351415636,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377859,,,test,hesrt,samples/GSE313918/GSM9377859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377860,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4649,36601,counts,pixel,3.8502316009242947,platform_constant,True,H&E,3.8502316009242947,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377860,,,test,hesrt,samples/GSE313918/GSM9377860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377861,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3794,36601,counts,pixel,3.8423441272769363,platform_constant,True,H&E,3.8423441272769363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377861,,,test,hesrt,samples/GSE313918/GSM9377861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377862,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3601,36601,counts,pixel,3.85433930820267,platform_constant,True,H&E,3.85433930820267,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377862,,,test,hesrt,samples/GSE313918/GSM9377862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377863,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4832,36601,counts,pixel,3.829544378602588,platform_constant,True,H&E,3.829544378602588,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377863,,,test,hesrt,samples/GSE313918/GSM9377863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377864,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3655,36601,counts,pixel,3.84302037768617,platform_constant,True,H&E,3.84302037768617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377864,,,test,hesrt,samples/GSE313918/GSM9377864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377865,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4910,36601,counts,pixel,3.839759391701174,platform_constant,True,H&E,3.839759391701174,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377865,,,test,hesrt,samples/GSE313918/GSM9377865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377866,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4929,36601,counts,pixel,3.8417752491709654,platform_constant,True,H&E,3.8417752491709654,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377866,,,test,hesrt,samples/GSE313918/GSM9377866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377867,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4566,36601,counts,pixel,3.8140205129578475,platform_constant,True,H&E,3.8140205129578475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377867,,,test,hesrt,samples/GSE313918/GSM9377867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377868,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3328,36601,counts,pixel,3.802257473915326,platform_constant,True,H&E,3.802257473915326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377868,,,test,hesrt,samples/GSE313918/GSM9377868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377869,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4759,36601,counts,pixel,3.8236996005548827,platform_constant,True,H&E,3.8236996005548827,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377869,,,test,hesrt,samples/GSE313918/GSM9377869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377870,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,55,male,extracted field,male,GSE313918:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4081,36601,counts,pixel,3.9525648421814816,platform_constant,True,H&E,3.9525648421814816,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377870,,,test,hesrt,samples/GSE313918/GSM9377870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377871,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,55,male,extracted field,male,GSE313918:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4979,36601,counts,pixel,3.9481300417716754,platform_constant,True,H&E,3.9481300417716754,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377871,,,test,hesrt,samples/GSE313918/GSM9377871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377872,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,55,male,extracted field,male,GSE313918:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4984,36601,counts,pixel,3.947688900663155,platform_constant,True,H&E,3.947688900663155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377872,,,test,hesrt,samples/GSE313918/GSM9377872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377873,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,55,male,extracted field,male,GSE313918:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4867,36601,counts,pixel,3.9185469500523453,platform_constant,True,H&E,3.9185469500523453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377873,,,test,hesrt,samples/GSE313918/GSM9377873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377874,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4510,36601,counts,pixel,3.8519419795526577,platform_constant,True,H&E,3.8519419795526577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377874,,,test,hesrt,samples/GSE313918/GSM9377874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377875,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,female,extracted field,female,GSE313918:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4950,36601,counts,pixel,3.846337779711802,platform_constant,True,H&E,3.846337779711802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377875,,,test,hesrt,samples/GSE313918/GSM9377875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377876,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,female,extracted field,female,GSE313918:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,3.8608654879049022,platform_constant,True,H&E,3.8608654879049022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377876,,,test,hesrt,samples/GSE313918/GSM9377876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377877,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4647,36601,counts,pixel,3.855225790638686,platform_constant,True,H&E,3.855225790638686,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377877,,,test,hesrt,samples/GSE313918/GSM9377877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377878,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,female,extracted field,female,GSE313918:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4948,36601,counts,pixel,3.8447045950683,platform_constant,True,H&E,3.8447045950683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377878,,,test,hesrt,samples/GSE313918/GSM9377878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377879,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,female,extracted field,female,GSE313918:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4986,36601,counts,pixel,3.858466407850609,platform_constant,True,H&E,3.858466407850609,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377879,,,test,hesrt,samples/GSE313918/GSM9377879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377880,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4133,36601,counts,pixel,3.862575980265974,platform_constant,True,H&E,3.862575980265974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377880,,,test,hesrt,samples/GSE313918/GSM9377880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377881,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4520,36601,counts,pixel,3.8415558809815655,platform_constant,True,H&E,3.8415558809815655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377881,,,test,hesrt,samples/GSE313918/GSM9377881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377882,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE313918:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4158,36601,counts,pixel,3.8387788626835997,platform_constant,True,H&E,3.8387788626835997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377882,,,test,hesrt,samples/GSE313918/GSM9377882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377883,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE313918:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4601,36601,counts,pixel,3.852024443329089,platform_constant,True,H&E,3.852024443329089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377883,,,test,hesrt,samples/GSE313918/GSM9377883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377884,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD014/14,SD014/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4755,36601,counts,pixel,3.8478371650540524,platform_constant,True,H&E,3.8478371650540524,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377884,,,test,hesrt,samples/GSE313918/GSM9377884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377885,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4411,36601,counts,pixel,3.8738314161043244,platform_constant,True,H&E,3.8738314161043244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377885,,,test,hesrt,samples/GSE313918/GSM9377885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377886,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4288,36601,counts,pixel,3.851183770957679,platform_constant,True,H&E,3.851183770957679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377886,,,test,hesrt,samples/GSE313918/GSM9377886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377887,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4268,36601,counts,pixel,3.8528138062034785,platform_constant,True,H&E,3.8528138062034785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377887,,,test,hesrt,samples/GSE313918/GSM9377887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377888,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4636,36601,counts,pixel,3.883805126537965,platform_constant,True,H&E,3.883805126537965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377888,,,test,hesrt,samples/GSE313918/GSM9377888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377889,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD014/14,SD014/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4487,36601,counts,pixel,3.869651391526983,platform_constant,True,H&E,3.869651391526983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377889,,,test,hesrt,samples/GSE313918/GSM9377889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377890,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD014/14,SD014/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4519,36601,counts,pixel,3.85516332197855,platform_constant,True,H&E,3.85516332197855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377890,,,test,hesrt,samples/GSE313918/GSM9377890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377891,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3689,36601,counts,pixel,3.9250575046617375,platform_constant,True,H&E,3.9250575046617375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377891,,,test,hesrt,samples/GSE313918/GSM9377891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377892,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4533,36601,counts,pixel,3.876852358998886,platform_constant,True,H&E,3.876852358998886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377892,,,test,hesrt,samples/GSE313918/GSM9377892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377893,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD029/15,SD029/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4320,36601,counts,pixel,3.9425869144657923,platform_constant,True,H&E,3.9425869144657923,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377893,,,test,hesrt,samples/GSE313918/GSM9377893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377894,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD029/15,SD029/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3249,36601,counts,pixel,3.931957201276503,platform_constant,True,H&E,3.931957201276503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377894,,,test,hesrt,samples/GSE313918/GSM9377894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377895,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD029/15,SD029/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4724,36601,counts,pixel,3.9097718433094983,platform_constant,True,H&E,3.9097718433094983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377895,,,test,hesrt,samples/GSE313918/GSM9377895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377896,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD029/15,SD029/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4211,36601,counts,pixel,3.9056935762805978,platform_constant,True,H&E,3.9056935762805978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377896,,,test,hesrt,samples/GSE313918/GSM9377896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377897,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4101,36601,counts,pixel,3.934287708206387,platform_constant,True,H&E,3.934287708206387,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377897,,,test,hesrt,samples/GSE313918/GSM9377897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377898,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD003/17,SD003/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4419,36601,counts,pixel,3.928747894492602,platform_constant,True,H&E,3.928747894492602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377898,,,test,hesrt,samples/GSE313918/GSM9377898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377899,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD003/17,SD003/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4291,36601,counts,pixel,3.9108850932348647,platform_constant,True,H&E,3.9108850932348647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377899,,,test,hesrt,samples/GSE313918/GSM9377899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377900,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3980,36601,counts,pixel,3.907867475769073,platform_constant,True,H&E,3.907867475769073,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377900,,,test,hesrt,samples/GSE313918/GSM9377900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377901,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3925,36601,counts,pixel,3.9028714126737034,platform_constant,True,H&E,3.9028714126737034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377901,,,test,hesrt,samples/GSE313918/GSM9377901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377902,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD003/17,SD003/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4488,36601,counts,pixel,3.926769832329407,platform_constant,True,H&E,3.926769832329407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377902,,,test,hesrt,samples/GSE313918/GSM9377902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377903,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,50,male,extracted field,male,GSE313918:SD003/17,SD003/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4875,36601,counts,pixel,3.9023238327508936,platform_constant,True,H&E,3.9023238327508936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377903,,,test,hesrt,samples/GSE313918/GSM9377903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377904,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4417,36601,counts,pixel,3.9241530814965015,platform_constant,True,H&E,3.9241530814965015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377904,,,test,hesrt,samples/GSE313918/GSM9377904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377905,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3937,36601,counts,pixel,3.912028922077396,platform_constant,True,H&E,3.912028922077396,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377905,,,test,hesrt,samples/GSE313918/GSM9377905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377906,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4741,36601,counts,pixel,3.9390252180866367,platform_constant,True,H&E,3.9390252180866367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377906,,,test,hesrt,samples/GSE313918/GSM9377906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377907,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3935,36601,counts,pixel,3.9063423563676567,platform_constant,True,H&E,3.9063423563676567,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377907,,,test,hesrt,samples/GSE313918/GSM9377907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377908,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4190,36601,counts,pixel,3.8992176154747447,platform_constant,True,H&E,3.8992176154747447,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377908,,,test,hesrt,samples/GSE313918/GSM9377908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377909,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4112,36601,counts,pixel,3.909119269041063,platform_constant,True,H&E,3.909119269041063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377909,,,test,hesrt,samples/GSE313918/GSM9377909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377910,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4531,36601,counts,pixel,3.923059131769598,platform_constant,True,H&E,3.923059131769598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377910,,,test,hesrt,samples/GSE313918/GSM9377910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377911,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4860,36601,counts,pixel,3.9341711289268066,platform_constant,True,H&E,3.9341711289268066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377911,,,test,hesrt,samples/GSE313918/GSM9377911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377912,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4966,36601,counts,pixel,3.9152376627722507,platform_constant,True,H&E,3.9152376627722507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377912,,,test,hesrt,samples/GSE313918/GSM9377912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377913,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3571,36601,counts,pixel,3.929312231354919,platform_constant,True,H&E,3.929312231354919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377913,,,test,hesrt,samples/GSE313918/GSM9377913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377914,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4574,36601,counts,pixel,3.922018052143964,platform_constant,True,H&E,3.922018052143964,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377914,,,test,hesrt,samples/GSE313918/GSM9377914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377915,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4709,36601,counts,pixel,3.9225024777520234,platform_constant,True,H&E,3.9225024777520234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377915,,,test,hesrt,samples/GSE313918/GSM9377915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377916,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,82,male,extracted field,male,GSE313918:SD030/19,SD030/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4807,36601,counts,pixel,3.903750211232817,platform_constant,True,H&E,3.903750211232817,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377916,,,test,hesrt,samples/GSE313918/GSM9377916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377917,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE313918:SD045/15,SD045/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4359,36601,counts,pixel,3.9221742218453928,platform_constant,True,H&E,3.9221742218453928,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377917,,,test,hesrt,samples/GSE313918/GSM9377917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377918,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE313918:SD045/15,SD045/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4671,36601,counts,pixel,3.910507264277775,platform_constant,True,H&E,3.910507264277775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377918,,,test,hesrt,samples/GSE313918/GSM9377918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377919,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE313918:SD045/15,SD045/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4987,36601,counts,pixel,3.950857825131771,platform_constant,True,H&E,3.950857825131771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377919,,,test,hesrt,samples/GSE313918/GSM9377919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377920,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,83,female,extracted field,female,GSE313918:SD045/15,SD045/15,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3781,36601,counts,pixel,3.932082944637424,platform_constant,True,H&E,3.932082944637424,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377920,,,test,hesrt,samples/GSE313918/GSM9377920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377921,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4843,36601,counts,pixel,3.915617402539615,platform_constant,True,H&E,3.915617402539615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377921,,,test,hesrt,samples/GSE313918/GSM9377921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377922,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3683,36601,counts,pixel,3.9434511715770757,platform_constant,True,H&E,3.9434511715770757,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377922,,,test,hesrt,samples/GSE313918/GSM9377922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377923,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3223,36601,counts,pixel,3.912278825908097,platform_constant,True,H&E,3.912278825908097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377923,,,test,hesrt,samples/GSE313918/GSM9377923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377924,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4441,36601,counts,pixel,3.918956808024728,platform_constant,True,H&E,3.918956808024728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377924,,,test,hesrt,samples/GSE313918/GSM9377924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377925,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,63,female,extracted field,female,GSE313918:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4641,36601,counts,pixel,3.9476583649641235,platform_constant,True,H&E,3.9476583649641235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377925,,,test,hesrt,samples/GSE313918/GSM9377925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377926,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,3.895568159140689,platform_constant,True,H&E,3.895568159140689,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377926,,,test,hesrt,samples/GSE313918/GSM9377926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377927,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4880,36601,counts,pixel,3.9691030106994463,platform_constant,True,H&E,3.9691030106994463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377927,,,test,hesrt,samples/GSE313918/GSM9377927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377928,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4440,36601,counts,pixel,3.9743019554348282,platform_constant,True,H&E,3.9743019554348282,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377928,,,test,hesrt,samples/GSE313918/GSM9377928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377929,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,71,male,extracted field,male,GSE313918:SD024/18,SD024/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4287,36601,counts,pixel,3.96229673123204,platform_constant,True,H&E,3.96229673123204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377929,,,test,hesrt,samples/GSE313918/GSM9377929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377930,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3603,36601,counts,pixel,3.960693671351824,platform_constant,True,H&E,3.960693671351824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377930,,,test,hesrt,samples/GSE313918/GSM9377930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377931,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,70,male,extracted field,male,GSE313918:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3712,36601,counts,pixel,3.943723935161945,platform_constant,True,H&E,3.943723935161945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377931,,,test,hesrt,samples/GSE313918/GSM9377931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377932,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4042,36601,counts,pixel,3.9138114762072456,platform_constant,True,H&E,3.9138114762072456,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377932,,,test,hesrt,samples/GSE313918/GSM9377932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377933,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,67,female,extracted field,female,GSE313918:SD002/16,SD002/16,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4090,36601,counts,pixel,3.938709248027337,platform_constant,True,H&E,3.938709248027337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377933,,,test,hesrt,samples/GSE313918/GSM9377933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377934,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4017,36601,counts,pixel,3.909846910538496,platform_constant,True,H&E,3.909846910538496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377934,,,test,hesrt,samples/GSE313918/GSM9377934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377935,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,57,male,extracted field,male,GSE313918:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3418,36601,counts,pixel,3.903256959986892,platform_constant,True,H&E,3.903256959986892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377935,,,test,hesrt,samples/GSE313918/GSM9377935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377936,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4645,36601,counts,pixel,3.9545538225747188,platform_constant,True,H&E,3.9545538225747188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377936,,,test,hesrt,samples/GSE313918/GSM9377936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377937,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4272,36601,counts,pixel,3.9173739197574697,platform_constant,True,H&E,3.9173739197574697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377937,,,test,hesrt,samples/GSE313918/GSM9377937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377938,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4038,36601,counts,pixel,3.8941678918226224,platform_constant,True,H&E,3.8941678918226224,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377938,,,test,hesrt,samples/GSE313918/GSM9377938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377939,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4730,36601,counts,pixel,3.882072300734937,platform_constant,True,H&E,3.882072300734937,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377939,,,test,hesrt,samples/GSE313918/GSM9377939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377940,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE313918:SD012/17,SD012/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4788,36601,counts,pixel,3.8971658822833026,platform_constant,True,H&E,3.8971658822833026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377940,,,test,hesrt,samples/GSE313918/GSM9377940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377941,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE313918:SD012/17,SD012/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4589,36601,counts,pixel,3.8803792606030054,platform_constant,True,H&E,3.8803792606030054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377941,,,test,hesrt,samples/GSE313918/GSM9377941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377942,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4277,36601,counts,pixel,3.876764813864023,platform_constant,True,H&E,3.876764813864023,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377942,,,test,hesrt,samples/GSE313918/GSM9377942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377943,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4778,36601,counts,pixel,3.8761511439884706,platform_constant,True,H&E,3.8761511439884706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377943,,,test,hesrt,samples/GSE313918/GSM9377943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377944,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE313918:SD012/17,SD012/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4029,36601,counts,pixel,3.899703017248089,platform_constant,True,H&E,3.899703017248089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377944,,,test,hesrt,samples/GSE313918/GSM9377944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377945,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE313918:SD012/17,SD012/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4645,36601,counts,pixel,3.887267032813218,platform_constant,True,H&E,3.887267032813218,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377945,,,test,hesrt,samples/GSE313918/GSM9377945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377946,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4396,36601,counts,pixel,3.9147319893803005,platform_constant,True,H&E,3.9147319893803005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377946,,,test,hesrt,samples/GSE313918/GSM9377946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377947,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD014/13,SD014/13,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3800,36601,counts,pixel,3.8798231346989724,platform_constant,True,H&E,3.8798231346989724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377947,,,test,hesrt,samples/GSE313918/GSM9377947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377948,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE313918:SD012/17,SD012/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4510,36601,counts,pixel,3.9061956598518495,platform_constant,True,H&E,3.9061956598518495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377948,,,test,hesrt,samples/GSE313918/GSM9377948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377949,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,71,female,extracted field,female,GSE313918:SD012/17,SD012/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4887,36601,counts,pixel,3.904281014711138,platform_constant,True,H&E,3.904281014711138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377949,,,test,hesrt,samples/GSE313918/GSM9377949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377950,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3986,36601,counts,pixel,3.906777422131101,platform_constant,True,H&E,3.906777422131101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377950,,,test,hesrt,samples/GSE313918/GSM9377950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377951,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3962,36601,counts,pixel,3.8765101256389074,platform_constant,True,H&E,3.8765101256389074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377951,,,test,hesrt,samples/GSE313918/GSM9377951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377952,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4055,36601,counts,pixel,3.90487320418915,platform_constant,True,H&E,3.90487320418915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377952,,,test,hesrt,samples/GSE313918/GSM9377952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377953,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,62,male,extracted field,male,GSE313918:SD027/14,SD027/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3476,36601,counts,pixel,3.909926436766753,platform_constant,True,H&E,3.909926436766753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377953,,,test,hesrt,samples/GSE313918/GSM9377953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377954,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD046/17,SD046/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4508,36601,counts,pixel,3.9317946379610356,platform_constant,True,H&E,3.9317946379610356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377954,,,test,hesrt,samples/GSE313918/GSM9377954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377955,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD046/17,SD046/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4188,36601,counts,pixel,3.895236087079976,platform_constant,True,H&E,3.895236087079976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377955,,,test,hesrt,samples/GSE313918/GSM9377955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377956,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD046/17,SD046/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4458,36601,counts,pixel,3.9270319436968624,platform_constant,True,H&E,3.9270319436968624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377956,,,test,hesrt,samples/GSE313918/GSM9377956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377957,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD046/17,SD046/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4096,36601,counts,pixel,3.947164313921474,platform_constant,True,H&E,3.947164313921474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377957,,,test,hesrt,samples/GSE313918/GSM9377957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377958,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE313918:SD014/18,SD014/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3667,36601,counts,pixel,3.888943461138134,platform_constant,True,H&E,3.888943461138134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377958,,,test,hesrt,samples/GSE313918/GSM9377958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377959,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE313918:SD014/18,SD014/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4855,36601,counts,pixel,3.914795769342859,platform_constant,True,H&E,3.914795769342859,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377959,,,test,hesrt,samples/GSE313918/GSM9377959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377960,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD035/14,SD035/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3432,36601,counts,pixel,3.8891674745407094,platform_constant,True,H&E,3.8891674745407094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377960,,,test,hesrt,samples/GSE313918/GSM9377960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377961,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD035/14,SD035/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3370,36601,counts,pixel,3.912690164033702,platform_constant,True,H&E,3.912690164033702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377961,,,test,hesrt,samples/GSE313918/GSM9377961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377962,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE313918:SD014/18,SD014/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4880,36601,counts,pixel,3.887529962799256,platform_constant,True,H&E,3.887529962799256,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377962,,,test,hesrt,samples/GSE313918/GSM9377962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377963,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,46,female,extracted field,female,GSE313918:SD014/18,SD014/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4782,36601,counts,pixel,3.9286424967031572,platform_constant,True,H&E,3.9286424967031572,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377963,,,test,hesrt,samples/GSE313918/GSM9377963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377964,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD035/14,SD035/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3621,36601,counts,pixel,3.89530433828524,platform_constant,True,H&E,3.89530433828524,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377964,,,test,hesrt,samples/GSE313918/GSM9377964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377965,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,59,female,extracted field,female,GSE313918:SD035/14,SD035/14,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3216,36601,counts,pixel,3.9092829365848405,platform_constant,True,H&E,3.9092829365848405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377965,,,test,hesrt,samples/GSE313918/GSM9377965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377966,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,40,male,extracted field,male,GSE313918:SD006/21,SD006/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4500,36601,counts,pixel,3.8909533076294243,platform_constant,True,H&E,3.8909533076294243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377966,,,test,hesrt,samples/GSE313918/GSM9377966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377967,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,40,male,extracted field,male,GSE313918:SD006/21,SD006/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4123,36601,counts,pixel,3.8814588900578317,platform_constant,True,H&E,3.8814588900578317,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377967,,,test,hesrt,samples/GSE313918/GSM9377967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377968,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD028/18,SD028/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4448,36601,counts,pixel,3.8749829479098565,platform_constant,True,H&E,3.8749829479098565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377968,,,test,hesrt,samples/GSE313918/GSM9377968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377969,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,40,male,extracted field,male,GSE313918:SD006/21,SD006/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4515,36601,counts,pixel,3.904228057213383,platform_constant,True,H&E,3.904228057213383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377969,,,test,hesrt,samples/GSE313918/GSM9377969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377970,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,adult,age rule: bare number read as years,adult,40,male,extracted field,male,GSE313918:SD006/21,SD006/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3680,36601,counts,pixel,3.8989749174424677,platform_constant,True,H&E,3.8989749174424677,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377970,,,test,hesrt,samples/GSE313918/GSM9377970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377971,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD028/18,SD028/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4563,36601,counts,pixel,3.912061216908461,platform_constant,True,H&E,3.912061216908461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377971,,,test,hesrt,samples/GSE313918/GSM9377971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377972,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD028/18,SD028/18,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4544,36601,counts,pixel,3.9079935322694803,platform_constant,True,H&E,3.9079935322694803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377972,,,test,hesrt,samples/GSE313918/GSM9377972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377973,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4628,36601,counts,pixel,3.8989088775725342,platform_constant,True,H&E,3.8989088775725342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377973,,,test,hesrt,samples/GSE313918/GSM9377973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377974,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3828,36601,counts,pixel,3.8839330892013475,platform_constant,True,H&E,3.8839330892013475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377974,,,test,hesrt,samples/GSE313918/GSM9377974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377975,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3624,36601,counts,pixel,3.9085933826370676,platform_constant,True,H&E,3.9085933826370676,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377975,,,test,hesrt,samples/GSE313918/GSM9377975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377976,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4243,36601,counts,pixel,3.908289267566987,platform_constant,True,H&E,3.908289267566987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377976,,,test,hesrt,samples/GSE313918/GSM9377976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377977,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4018,36601,counts,pixel,3.934298759275123,platform_constant,True,H&E,3.934298759275123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377977,,,test,hesrt,samples/GSE313918/GSM9377977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377978,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3178,36601,counts,pixel,3.9298169535614487,platform_constant,True,H&E,3.9298169535614487,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377978,,,test,hesrt,samples/GSE313918/GSM9377978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377979,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3608,36601,counts,pixel,3.9294408508902,platform_constant,True,H&E,3.9294408508902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377979,,,test,hesrt,samples/GSE313918/GSM9377979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377980,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD022/21,SD022/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3341,36601,counts,pixel,3.9249671030277953,platform_constant,True,H&E,3.9249671030277953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377980,,,test,hesrt,samples/GSE313918/GSM9377980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377981,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4874,36601,counts,pixel,3.852208338027473,platform_constant,True,H&E,3.852208338027473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377981,,,test,hesrt,samples/GSE313918/GSM9377981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377982,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4598,36601,counts,pixel,3.8522358001785038,platform_constant,True,H&E,3.8522358001785038,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377982,,,test,hesrt,samples/GSE313918/GSM9377982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377983,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3913,36601,counts,pixel,3.8592607426908514,platform_constant,True,H&E,3.8592607426908514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377983,,,test,hesrt,samples/GSE313918/GSM9377983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377984,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3963,36601,counts,pixel,3.8691455545615727,platform_constant,True,H&E,3.8691455545615727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377984,,,test,hesrt,samples/GSE313918/GSM9377984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377985,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4983,36601,counts,pixel,3.8708694043325287,platform_constant,True,H&E,3.8708694043325287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377985,,,test,hesrt,samples/GSE313918/GSM9377985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377986,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4967,36601,counts,pixel,3.862850436898979,platform_constant,True,H&E,3.862850436898979,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377986,,,test,hesrt,samples/GSE313918/GSM9377986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377987,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4690,36601,counts,pixel,3.850416873046143,platform_constant,True,H&E,3.850416873046143,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377987,,,test,hesrt,samples/GSE313918/GSM9377987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377988,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,81,male,extracted field,male,GSE313918:SD026/21,SD026/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4472,36601,counts,pixel,3.875785777085229,platform_constant,True,H&E,3.875785777085229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377988,,,test,hesrt,samples/GSE313918/GSM9377988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377989,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD048/21,SD048/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3353,36601,counts,pixel,3.8856112973083934,platform_constant,True,H&E,3.8856112973083934,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377989,,,test,hesrt,samples/GSE313918/GSM9377989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377990,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD048/21,SD048/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3572,36601,counts,pixel,3.870032246327292,platform_constant,True,H&E,3.870032246327292,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377990,,,test,hesrt,samples/GSE313918/GSM9377990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377991,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD045/21,SD045/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4796,36601,counts,pixel,3.8612914006625942,platform_constant,True,H&E,3.8612914006625942,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377991,,,test,hesrt,samples/GSE313918/GSM9377991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377992,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD045/21,SD045/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4583,36601,counts,pixel,3.8671164849937663,platform_constant,True,H&E,3.8671164849937663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377992,,,test,hesrt,samples/GSE313918/GSM9377992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377993,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD048/21,SD048/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2751,36601,counts,pixel,3.8734706512417323,platform_constant,True,H&E,3.8734706512417323,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377993,,,test,hesrt,samples/GSE313918/GSM9377993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377994,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,aged,age rule: bare number read as years,aged,65,female,extracted field,female,GSE313918:SD048/21,SD048/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3383,36601,counts,pixel,3.88378690514017,platform_constant,True,H&E,3.88378690514017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377994,,,test,hesrt,samples/GSE313918/GSM9377994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377995,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD045/21,SD045/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4967,36601,counts,pixel,3.8947233273606088,platform_constant,True,H&E,3.8947233273606088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377995,,,test,hesrt,samples/GSE313918/GSM9377995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377996,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,53,female,extracted field,female,GSE313918:SD045/21,SD045/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4992,36601,counts,pixel,3.902291735601221,platform_constant,True,H&E,3.902291735601221,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377996,,,test,hesrt,samples/GSE313918/GSM9377996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377997,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,51,female,extracted field,female,GSE313918:SD015/22,SD015/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4218,36601,counts,pixel,3.915754906717252,platform_constant,True,H&E,3.915754906717252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377997,,,test,hesrt,samples/GSE313918/GSM9377997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377998,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,51,female,extracted field,female,GSE313918:SD015/22,SD015/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4433,36601,counts,pixel,3.9256488697608405,platform_constant,True,H&E,3.9256488697608405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377998,,,test,hesrt,samples/GSE313918/GSM9377998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377999,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,52,female,extracted field,female,GSE313918:SD053/21,SD053/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4819,36601,counts,pixel,3.921552396919561,platform_constant,True,H&E,3.921552396919561,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377999,,,test,hesrt,samples/GSE313918/GSM9377999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378000,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,52,female,extracted field,female,GSE313918:SD053/21,SD053/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4031,36601,counts,pixel,3.9073995238900325,platform_constant,True,H&E,3.9073995238900325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378000,,,test,hesrt,samples/GSE313918/GSM9378000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378001,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,51,female,extracted field,female,GSE313918:SD015/22,SD015/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4654,36601,counts,pixel,3.9013183811468792,platform_constant,True,H&E,3.9013183811468792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378001,,,test,hesrt,samples/GSE313918/GSM9378001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378002,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,51,female,extracted field,female,GSE313918:SD015/22,SD015/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4661,36601,counts,pixel,3.8792737329160554,platform_constant,True,H&E,3.8792737329160554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378002,,,test,hesrt,samples/GSE313918/GSM9378002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378003,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,52,female,extracted field,female,GSE313918:SD053/21,SD053/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3670,36601,counts,pixel,3.9407006186130644,platform_constant,True,H&E,3.9407006186130644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378003,,,test,hesrt,samples/GSE313918/GSM9378003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378004,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALS,adult,age rule: bare number read as years,adult,52,female,extracted field,female,GSE313918:SD053/21,SD053/21,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4616,36601,counts,pixel,3.924662785017499,platform_constant,True,H&E,3.924662785017499,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378004,,,test,hesrt,samples/GSE313918/GSM9378004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378005,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD025/17,SD025/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4067,36601,counts,pixel,3.8708731171845283,platform_constant,True,H&E,3.8708731171845283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378005,,,test,hesrt,samples/GSE313918/GSM9378005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378006,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD025/17,SD025/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2748,36601,counts,pixel,3.8646001994753103,platform_constant,True,H&E,3.8646001994753103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378006,,,test,hesrt,samples/GSE313918/GSM9378006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378007,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD025/17,SD025/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3997,36601,counts,pixel,3.8778820124849847,platform_constant,True,H&E,3.8778820124849847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378007,,,test,hesrt,samples/GSE313918/GSM9378007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378008,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,86,female,extracted field,female,GSE313918:SD013/23,SD013/23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3954,36601,counts,pixel,3.925323933824272,platform_constant,True,H&E,3.925323933824272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378008,,,test,hesrt,samples/GSE313918/GSM9378008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378009,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,86,female,extracted field,female,GSE313918:SD013/23,SD013/23,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3943,36601,counts,pixel,3.8971787399137967,platform_constant,True,H&E,3.8971787399137967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378009,,,test,hesrt,samples/GSE313918/GSM9378009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378010,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD025/17,SD025/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3840,36601,counts,pixel,3.888901047675081,platform_constant,True,H&E,3.888901047675081,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378010,,,test,hesrt,samples/GSE313918/GSM9378010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378011,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,aged,age rule: bare number read as years,aged,73,male,extracted field,male,GSE313918:SD025/17,SD025/17,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4674,36601,counts,pixel,3.8976453768549577,platform_constant,True,H&E,3.8976453768549577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378011,,,test,hesrt,samples/GSE313918/GSM9378011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378012,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD026/19,SD026/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4511,36601,counts,pixel,3.8964753824643594,platform_constant,True,H&E,3.8964753824643594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378012,,,test,hesrt,samples/GSE313918/GSM9378012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378013,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD026/19,SD026/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4574,36601,counts,pixel,3.919594528188989,platform_constant,True,H&E,3.919594528188989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378013,,,test,hesrt,samples/GSE313918/GSM9378013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378014,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD031/22,SD031/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2759,36601,counts,pixel,3.914538860234774,platform_constant,True,H&E,3.914538860234774,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378014,,,test,hesrt,samples/GSE313918/GSM9378014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378015,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD031/22,SD031/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2493,36601,counts,pixel,3.934402374069018,platform_constant,True,H&E,3.934402374069018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378015,,,test,hesrt,samples/GSE313918/GSM9378015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378016,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD031/22,SD031/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1686,36601,counts,pixel,3.912311747999808,platform_constant,True,H&E,3.912311747999808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378016,,,test,hesrt,samples/GSE313918/GSM9378016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378017,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006483,Brodmann (1909) area 46,BA46,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,amyotrophic lateral sclerosis,ALSci,aged,age rule: bare number read as years,aged,74,female,extracted field,female,GSE313918:SD031/22,SD031/22,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1745,36601,counts,pixel,3.939262101091385,platform_constant,True,H&E,3.939262101091385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378017,,,test,hesrt,samples/GSE313918/GSM9378017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378018,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD026/19,SD026/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4936,36601,counts,pixel,3.9169632793962004,platform_constant,True,H&E,3.9169632793962004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378018,,,test,hesrt,samples/GSE313918/GSM9378018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378019,GSE313918+GSE315586,GSE313918,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0006481,Brodmann (1909) area 44,BA44,primary tissue,,,normal,luna,,Control,adult,age rule: bare number read as years,adult,58,male,extracted field,male,GSE313918:SD026/19,SD026/19,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4524,36601,counts,pixel,3.915726439536683,platform_constant,True,H&E,3.915726439536683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378019,,,test,hesrt,samples/GSE313918/GSM9378019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378020,GSE313919,GSE313919,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin organoids,organoid,MONDO:0005550,infectious disease,disease,mondo_predicate (Luna: perturbation),,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,hMulti_100g,xenium-2.0.0.5,cell,211545,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051754476762,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378020,,,train,sda-all,samples/GSE313919/GSM9378020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.42, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9378021,GSE313919,GSE313919,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Skin organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,hMulti_100g,xenium-1.5.0.3,cell,84812,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999277337297654,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378021,,,train,sda-all,samples/GSE313919/GSM9378021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.31, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9378022,GSE313919,GSE313919,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Skin organoids,organoid,MONDO:0005550,infectious disease,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,hMulti_100g,xenium-1.5.0.3,cell,76343,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999770768384375,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378022,,,train,sda-all,samples/GSE313919/GSM9378022,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.37, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9378023,GSE313919,GSE313919,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin organoids,organoid,MONDO:0005550,infectious disease,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,hMulti_100g,xenium-1.5.0.3,cell,76277,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999865613628845,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378023,,,train,sda-all,samples/GSE313919/GSM9378023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.36, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9380392,GSE314035,GSE314035,Protective efficacy of AAV-expressed bNAbs co-delivered with PD-L1,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,3BNC117-only,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,688434,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.9416554246475597,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42282848,,GSM9380392,,,train,sda-all,samples/GSE314035/GSM9380392,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.86, ""life_stage"": 1.0}",,feature_species_differs
GSM9380393,GSE314035,GSE314035,Protective efficacy of AAV-expressed bNAbs co-delivered with PD-L1,Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Homo sapiens,skeletal muscle,luna,UBERON:0001134,skeletal muscle tissue,muscle,primary tissue,,,perturbation,luna,,3BNC117 plus PD-L1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,683436,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.940683878689568,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42282848,,GSM9380393,,,train,sda-all,samples/GSE314035/GSM9380393,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.86, ""life_stage"": 1.0}",,feature_species_differs
GSM9391434,GSE314260,GSE314260,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,hTEM.v3,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,sample text,,,,,,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,230740,18085,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,,,GSM9391434,,,train,sda-all,samples/GSE314260/GSM9391434,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.79, ""disease_status"": 0.68, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9391436,GSE314260,GSE314260,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,hTEM.v3,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,sample text,,,,,,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,154502,18085,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,zero_count_observations,VERIFIED,,,,,,GSM9391436,,,train,sda-all,samples/GSE314260/GSM9391436,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.91, ""disease_status"": 0.72, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9391439,GSE314260,GSE314260,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,hTEM.v3,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,sample text,,,,,,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,35269,18085,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9391439,,,train,sda-all,samples/GSE314260/GSM9391439,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.92, ""disease_status"": 0.76, ""uberon"": 0.02, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9391441,GSE314260,GSE314260,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,hTEM.v3,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,female,sample text,,,,,,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,70097,18085,counts,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9391441,,,train,sda-all,samples/GSE314260/GSM9391441,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.63, ""disease_status"": 0.81, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9393658,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,MERFISH WT,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,174425,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393658,,,test,sda-all,samples/GSE314325/GSM9393658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393659,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,MERFISH WT,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,328945,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393659,,,test,sda-all,samples/GSE314325/GSM9393659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393660,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,MERFISH Lats 1wk,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,640556,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393660,,,test,sda-all,samples/GSE314325/GSM9393660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9393661,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,MERFISH Lats 4wk,juvenile,luna,juvenile,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,648365,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393661,,,test,sda-all,samples/GSE314325/GSM9393661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9393662,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,MERFISH Yap 1wk,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,115112,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393662,,,test,sda-all,samples/GSE314325/GSM9393662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393663,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,MERFISH Yap 1wk,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,217913,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393663,,,test,sda-all,samples/GSE314325/GSM9393663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393664,GSE314325+GSE314329,GSE314325,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,MERFISH Yap 4wk,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,486918,550,unknown,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42341114,,GSM9393664,,,test,sda-all,samples/GSE314325/GSM9393664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM9401276,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,131054,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.500001881396749,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401276,,,train,sda-all,samples/GSE314531/GSM9401276,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9401277,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Irradiated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,390706,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401277,,,train,sda-all,samples/GSE314531/GSM9401277,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9401278,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Hydrogel,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,129470,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998161257699736,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401278,,,train,sda-all,samples/GSE314531/GSM9401278,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9401279,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,171943,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000111968579894,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401279,,,train,sda-all,samples/GSE314531/GSM9401279,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.49}",organ;disease_status;life_stage,low_confidence_annotation
GSM9401280,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Irradiated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,363456,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.500009661035663,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401280,,,train,sda-all,samples/GSE314531/GSM9401280,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9401281,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,215740,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000131222719487,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401281,,,train,sda-all,samples/GSE314531/GSM9401281,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.85}",organ;disease_status,low_confidence_annotation
GSM9401282,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Hydrogel,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,207599,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999971846846846,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401282,,,train,sda-all,samples/GSE314531/GSM9401282,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9401283,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Hydrogel,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,224696,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000150602409639,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401283,,,train,sda-all,samples/GSE314531/GSM9401283,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.97}",organ,low_confidence_annotation
GSM9401284,GSE314531,GSE314531,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,UBERON:0001736,submandibular gland,,primary tissue,,,perturbation,luna,,Irradiated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,362563,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999448914361294,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401284,,,train,sda-all,samples/GSE314531/GSM9401284,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9414344,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2302,17943,counts,pixel,4.436110943869739,platform_constant,True,H&E,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414344,,,train,hesrt,samples/GSE314851/GSM9414344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9414345,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1523,17943,counts,pixel,4.436110943869739,platform_constant,True,H&E,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-ca1826e66722,cross_gse_redeposit,GSM9451519,train,hesrt,samples/GSE314851/GSM9414345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9414346,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1430,17943,counts,pixel,4.436110943869739,platform_constant,True,H&E,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-6259f3c0f5e9,cross_gse_redeposit,GSM9451520,train,hesrt,samples/GSE314851/GSM9414346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9414347,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2205,17943,counts,pixel,4.436110943869739,platform_constant,True,H&E,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414347,,,train,hesrt,samples/GSE314851/GSM9414347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414348,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1787,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414348,,,train,hesrt,samples/GSE314851/GSM9414348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9414349,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1040,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414349,,,train,hesrt,samples/GSE314851/GSM9414349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414350,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1058,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414350,,,train,hesrt,samples/GSE314851/GSM9414350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414351,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1273,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-cf198d0df395,cross_gse_redeposit,GSM9451521,train,hesrt,samples/GSE314851/GSM9414351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414352,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,733,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414352,,,train,hesrt,samples/GSE314851/GSM9414352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414353,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,749,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414353,,,train,hesrt,samples/GSE314851/GSM9414353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9414354,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,889,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414354,,,train,hesrt,samples/GSE314851/GSM9414354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9414355,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,778,17943,counts,pixel,4.542592534583681,platform_constant,True,H&E,4.542592534583681,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-924dda53a0a0,cross_gse_redeposit,GSM9451522,train,hesrt,samples/GSE314851/GSM9414355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9414356,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2349,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-93b74e2a9626,cross_gse_redeposit,GSM9451523,train,hesrt,samples/GSE314851/GSM9414356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414357,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1014,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414357,,,train,hesrt,samples/GSE314851/GSM9414357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9414358,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,812,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-bd1415b3d79c,cross_gse_redeposit,GSM9451524,train,hesrt,samples/GSE314851/GSM9414358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9414359,GSE314851,GSE314851,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,coronary artery disease,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1418,17943,counts,pixel,4.508950280735906,platform_constant,True,H&E,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414359,,,train,hesrt,samples/GSE314851/GSM9414359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416128,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3740,18085,counts,pixel,0.5315021153078575,platform_constant,True,H&E,0.5315021153078575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416128,,,train,hesrt,samples/GSE314910/GSM9416128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416129,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4137,18085,counts,pixel,0.7886055102201678,platform_constant,True,H&E,0.7886055102201678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416129,,,train,hesrt,samples/GSE314910/GSM9416129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416130,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4302,18085,counts,pixel,1.3120485356928033,platform_constant,True,H&E,1.3120485356928033,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416130,,,train,hesrt,samples/GSE314910/GSM9416130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416131,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4090,18085,counts,pixel,0.7880199325893243,platform_constant,True,H&E,0.7880199325893243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416131,,,train,hesrt,samples/GSE314910/GSM9416131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416132,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1800,18085,counts,pixel,1.3092093204052448,platform_constant,True,H&E,1.3092093204052448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416132,,,train,hesrt,samples/GSE314910/GSM9416132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416133,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4974,18085,counts,pixel,1.010307195245044,platform_constant,True,H&E,1.010307195245044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416133,,,train,hesrt,samples/GSE314910/GSM9416133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416134,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3676,18085,counts,pixel,0.5288061314723693,platform_constant,True,H&E,0.5288061314723693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416134,,,train,hesrt,samples/GSE314910/GSM9416134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416135,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,908,18085,counts,pixel,0.5256558197290908,platform_constant,True,H&E,0.5256558197290908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416135,,,train,hesrt,samples/GSE314910/GSM9416135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416136,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4571,18085,counts,pixel,0.7925283906091234,platform_constant,True,H&E,0.7925283906091234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416136,,,train,hesrt,samples/GSE314910/GSM9416136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416137,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4976,18085,counts,pixel,0.7870356875256983,platform_constant,True,H&E,0.7870356875256983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416137,,,train,hesrt,samples/GSE314910/GSM9416137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416138,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4709,18085,counts,pixel,5.504109708006646,platform_constant,True,H&E,5.504109708006646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416138,,,train,hesrt,samples/GSE314910/GSM9416138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416139,GSE314910,GSE314910,Spatial transcriptomic signatures of cardiac sarcoidosis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,cardiac sarcoidosis,No Immunosuppression,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,864,18085,counts,pixel,4.0157294325794455,platform_constant,True,H&E,4.0157294325794455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416139,,,train,hesrt,samples/GSE314910/GSM9416139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9422182,GSE315151,GSE315151,A Spatiotemporal Cell Atlas of the Developing Rat Tooth Germ Reveals Iron-Deficiency Induced Ameloblast Dysregulation,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,oral cavity,luna,UBERON:0001091,calcareous tooth,tooth,primary tissue,MONDO:0001356;MONDO:0001639,iron deficiency anemia;deficiency anemia,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,4357,28476,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9422182,,,train,sda-all,samples/GSE315151/GSM9422182,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9422183,GSE315151,GSE315151,A Spatiotemporal Cell Atlas of the Developing Rat Tooth Germ Reveals Iron-Deficiency Induced Ameloblast Dysregulation,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,oral cavity,luna,UBERON:0001091,calcareous tooth,tooth,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,6180,30075,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9422183,,,train,sda-all,samples/GSE315151/GSM9422183,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9423409,GSE315233,GSE315233,A Single-Cell Bioprinting Approach with Subcellular Resolution to Reconstruct Native Cellular Microenvironments and Interrogate Spatial Biology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Engineered in vitro model,engineered tissue,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,430490,18085,counts,um,1.0,verified,True,H&E,2.290404598293279,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42281981,,GSM9423409,,,train,sda-all,samples/GSE315233/GSM9423409,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 0.33, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9423410,GSE315233,GSE315233,A Single-Cell Bioprinting Approach with Subcellular Resolution to Reconstruct Native Cellular Microenvironments and Interrogate Spatial Biology,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Engineered in vitro model,engineered tissue,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,366883,18085,counts,um,1.0,verified,True,H&E,2.6369121101022532,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42281981,,GSM9423410,,,train,sda-all,samples/GSE315233/GSM9423410,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.75, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433805,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,132370,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000045863144377,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433805,,,train,sda-all,samples/GSE315243/GSM9433805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433806,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2d1_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,314992,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999909420289855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433806,,,train,sda-all,samples/GSE315243/GSM9433806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433807,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2d1_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,205308,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000111344404148,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433807,,,train,sda-all,samples/GSE315243/GSM9433807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433808,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K3_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,111065,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999840357598978,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433808,,,train,sda-all,samples/GSE315243/GSM9433808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433809,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K3_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68763,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000171971017151,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433809,,,train,sda-all,samples/GSE315243/GSM9433809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433810,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,178694,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998497144574694,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433810,,,train,sda-all,samples/GSE315243/GSM9433810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433811,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,66389,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433811,,,train,sda-all,samples/GSE315243/GSM9433811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433812,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K2_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,81600,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000090336568243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433812,,,train,sda-all,samples/GSE315243/GSM9433812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433813,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,127105,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000171703296703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433813,,,train,sda-all,samples/GSE315243/GSM9433813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433814,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,91534,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433814,,,train,sda-all,samples/GSE315243/GSM9433814,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433815,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,K2_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,138931,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499999059938332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433815,,,train,sda-all,samples/GSE315243/GSM9433815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9433816,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,236220,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912713306856,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433816,,,train,sda-all,samples/GSE315243/GSM9433816,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433817,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K3_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,107097,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999867272298254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433817,,,train,sda-all,samples/GSE315243/GSM9433817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433818,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,78357,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999778813259407,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433818,,,train,sda-all,samples/GSE315243/GSM9433818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433819,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,246550,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000019427032067,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433819,,,train,sda-all,samples/GSE315243/GSM9433819,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9433820,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2d1_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68215,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997690886699503,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433820,,,train,sda-all,samples/GSE315243/GSM9433820,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433821,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2d1_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,138970,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000245249896736,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433821,,,train,sda-all,samples/GSE315243/GSM9433821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433822,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0023370,neoplastic disease or syndrome,disease,luna,,K2_vehicle,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,587225,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103546466477,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433822,,,train,sda-all,samples/GSE315243/GSM9433822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433823,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K2d1_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,82082,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896935550365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433823,,,train,sda-all,samples/GSE315243/GSM9433823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433824,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,K2d1_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,219619,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103455410718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433824,,,train,sda-all,samples/GSE315243/GSM9433824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9433825,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K2_vehicle,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,701989,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999884962267627,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433825,,,train,sda-all,samples/GSE315243/GSM9433825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433826,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005070,neoplasm,disease,mondo_predicate (Luna: perturbation),,K2_MRTX1133,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,285151,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999884287454324,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433826,,,train,sda-all,samples/GSE315243/GSM9433826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433827,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005070,neoplasm,disease,mondo_predicate (Luna: perturbation),,K2_MRTX1133,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,468761,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998488608883795,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433827,,,train,sda-all,samples/GSE315243/GSM9433827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433828,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,mondo_predicate (Luna: perturbation),,K2_MRTX1133,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,594930,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999085945497973,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433828,,,train,sda-all,samples/GSE315243/GSM9433828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433829,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005070,neoplasm,disease,mondo_predicate (Luna: perturbation),,K2_MRTX1133,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,335571,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000038189594972,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433829,,,train,sda-all,samples/GSE315243/GSM9433829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433830,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K3_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,790847,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059910243562,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433830,,,train,sda-all,samples/GSE315243/GSM9433830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433831,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K3_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,531738,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000005447335164,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433831,,,train,sda-all,samples/GSE315243/GSM9433831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433832,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,,,normal,luna,,K4_ctrl,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,557782,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034468495794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433832,,,train,sda-all,samples/GSE315243/GSM9433832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9433833,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,623758,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092661230541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433833,,,train,sda-all,samples/GSE315243/GSM9433833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433834,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1234164,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999073387694587,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433834,,,train,sda-all,samples/GSE315243/GSM9433834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9433835,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,715372,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999939995636047,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433835,,,train,sda-all,samples/GSE315243/GSM9433835,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.65, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433836,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,396241,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999914675767918,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433836,,,train,sda-all,samples/GSE315243/GSM9433836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433837,GSE315243,GSE315243,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,primary tissue,MONDO:0005070,neoplasm,disease,luna,,K3_shp53,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,340164,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000031855249746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433837,,,train,sda-all,samples/GSE315243/GSM9433837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9423568,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7403,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000044164409375,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423568,,,train,sda-all,samples/GSE315246/GSM9423568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423569,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7194,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423569,,,train,sda-all,samples/GSE315246/GSM9423569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9423570,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7953,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999852871939736,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41610194,,GSM9423570,,,train,sda-all,samples/GSE315246/GSM9423570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9423571,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8080,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41610194,,GSM9423571,,,train,sda-all,samples/GSE315246/GSM9423571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423572,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10244,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423572,,,train,sda-all,samples/GSE315246/GSM9423572,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423573,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10288,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499967461296068,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423573,,,train,sda-all,samples/GSE315246/GSM9423573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423574,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11120,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979332010582,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423574,,,train,sda-all,samples/GSE315246/GSM9423574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423575,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19051,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068832599119,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423575,,,train,sda-all,samples/GSE315246/GSM9423575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9423576,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19268,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000172239573765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423576,,,train,sda-all,samples/GSE315246/GSM9423576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423577,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17373,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423577,,,train,sda-all,samples/GSE315246/GSM9423577,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423578,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10685,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103512900976,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423578,,,train,sda-all,samples/GSE315246/GSM9423578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423579,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10580,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423579,,,train,sda-all,samples/GSE315246/GSM9423579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423580,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6004,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999852576954829,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423580,,,train,sda-all,samples/GSE315246/GSM9423580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9423581,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5878,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423581,,,train,sda-all,samples/GSE315246/GSM9423581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423582,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11029,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999915438965724,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423582,,,train,sda-all,samples/GSE315246/GSM9423582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9423583,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14277,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999767873723305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423583,,,train,sda-all,samples/GSE315246/GSM9423583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423584,GSE315246,GSE315246,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,MONDO:0005311,atherosclerosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21718,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999938129021613,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423584,,,train,sda-all,samples/GSE315246/GSM9423584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9424602,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11786,5051,counts,um,1.0,verified,True,fluorescence: DAPI,0.500061041779707,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424602,,,train,sda-all,samples/GSE315295/GSM9424602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424603,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10905,4706,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999697946033025,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424603,,,train,sda-all,samples/GSE315295/GSM9424603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424604,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,10215,4724,counts,um,1.0,verified,True,fluorescence: DAPI,0.5001004016064257,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424604,,,train,sda-all,samples/GSE315295/GSM9424604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424605,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11969,4820,counts,um,1.0,verified,True,fluorescence: DAPI,0.5001004016064257,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424605,,,train,sda-all,samples/GSE315295/GSM9424605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9424606,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16498,5806,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000101433594807,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424606,,,train,sda-all,samples/GSE315295/GSM9424606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 0.28}",disease_status;life_stage,low_confidence_annotation
GSM9424607,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14654,5564,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000067879446104,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424607,,,train,sda-all,samples/GSE315295/GSM9424607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",disease_status;life_stage,low_confidence_annotation
GSM9424608,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12441,5180,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999923281505728,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424608,,,train,sda-all,samples/GSE315295/GSM9424608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.63}",disease_status,low_confidence_annotation
GSM9424609,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24039,5676,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999923281505728,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424609,,,train,sda-all,samples/GSE315295/GSM9424609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9424610,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6303,4593,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000150602409638,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424610,,,train,sda-all,samples/GSE315295/GSM9424610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9424611,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12243,5193,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000102375102374,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424611,,,train,sda-all,samples/GSE315295/GSM9424611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9424612,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15357,5296,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999357239512855,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424612,,,train,sda-all,samples/GSE315295/GSM9424612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9424613,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6604,4840,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000101902173913,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424613,,,train,sda-all,samples/GSE315295/GSM9424613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9424614,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15708,5203,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999864901378006,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424614,,,train,sda-all,samples/GSE315295/GSM9424614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9424615,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14359,5979,counts,um,1.0,verified,True,fluorescence: DAPI,0.500061041779707,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424615,,,train,sda-all,samples/GSE315295/GSM9424615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9424616,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7779,5152,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000101902173913,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424616,,,train,sda-all,samples/GSE315295/GSM9424616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9424617,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7945,5123,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000406834825061,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424617,,,train,sda-all,samples/GSE315295/GSM9424617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9424618,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,18089,9106,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000085875240451,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424618,,,train,sda-all,samples/GSE315295/GSM9424618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424619,GSE315295,GSE315295,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0001068,skin of back,back skin,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19605,10215,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999814936667215,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424619,,,train,sda-all,samples/GSE315295/GSM9424619,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427137,GSE315408,GSE315408,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002084,heart left ventricle,"left ventricle, EFE",primary tissue,MONDO:0009169,endocardial fibroelastosis,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,12270,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9427137,,,train,sda-all,samples/GSE315408/GSM9427137,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427138,GSE315408,GSE315408,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002084,heart left ventricle,"left ventricle, EFE",primary tissue,MONDO:0009169,endocardial fibroelastosis,disease,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,150691,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9427138,,,train,sda-all,samples/GSE315408/GSM9427138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427139,GSE315408,GSE315408,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002084,heart left ventricle,"left ventricle, healthy",primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,183310,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9427139,,,train,sda-all,samples/GSE315408/GSM9427139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9427140,GSE315408,GSE315408,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002084,heart left ventricle,"left ventricle, healthy",primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,85903,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9427140,,,train,sda-all,samples/GSE315408/GSM9427140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427141,GSE315408,GSE315408,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002084,heart left ventricle,"left ventricle, healthy",primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,88577,550,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9427141,,,train,sda-all,samples/GSE315408/GSM9427141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427181,GSE315411,GSE315411,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1098312,8162,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999950965436081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427181,,,train,sda-all,samples/GSE315411/GSM9427181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427182,GSE315411,GSE315411,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1111938,7807,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912778020061,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427182,,,train,sda-all,samples/GSE315411/GSM9427182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427183,GSE315411,GSE315411,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1107123,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000070821529745,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427183,,,train,sda-all,samples/GSE315411/GSM9427183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427184,GSE315411,GSE315411,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1110346,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912778020061,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427184,,,train,sda-all,samples/GSE315411/GSM9427184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9427185,GSE315411,GSE315411,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1104638,7792,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912778020061,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427185,,,train,sda-all,samples/GSE315411/GSM9427185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM10044212,GSE315416,GSE315416,A High-Resolution Stereo-seq Spatial Transcriptomic Dataset of the Bovine Liver,Bos taurus,9913,domestic cattle,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,liver,luna,UBERON:0002107,liver,Cattle Liver,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,128906,19045,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42737743,,GSM10044212,,,train,sda-all,samples/GSE315416/GSM10044212,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.97, ""life_stage"": 0.79}",,
GSM9427230,GSE315416,GSE315416,A High-Resolution Stereo-seq Spatial Transcriptomic Dataset of the Bovine Liver,Bos taurus,9913,domestic cattle,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,liver,luna,UBERON:0002107,liver,Cattle Liver,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo-seq,,,bin,111539,18680,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42737743,,GSM9427230,,,train,sda-all,samples/GSE315416/GSM9427230,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.84}",,
GSM9428101,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,CD1 mouse fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,172225,13098,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000074812393536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428101,,,train,sda-all,samples/GSE315435/GSM9428101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9428102,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,CD1 mouse fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,244107,13098,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999884962267627,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428102,,,train,sda-all,samples/GSE315435/GSM9428102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9428103,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,CD1 mouse fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,329957,13098,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428103,,,train,sda-all,samples/GSE315435/GSM9428103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9428104,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,CD1 mouse fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,111807,13098,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999972401611746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428104,,,train,sda-all,samples/GSE315435/GSM9428104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM9428105,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,CD1 mouse fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,304788,13098,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000071195567751,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428105,,,train,sda-all,samples/GSE315435/GSM9428105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.71}",,
GSM9428106,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,kidney,luna,UBERON:0002113,kidney,CD1 mouse fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,328589,13098,counts,um,1.0,verified,True,fluorescence: DAPI,0.500001379995584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428106,,,train,sda-all,samples/GSE315435/GSM9428106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9428107,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,human fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,338916,9691,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999756667315554,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428107,,,train,sda-all,samples/GSE315435/GSM9428107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428108,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,human fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,188382,9691,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000038803807947,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428108,,,train,sda-all,samples/GSE315435/GSM9428108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428109,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,human fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,288214,9691,counts,um,1.0,verified,True,fluorescence: DAPI,0.500008409232043,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428109,,,train,sda-all,samples/GSE315435/GSM9428109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428110,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,human fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,295662,9691,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000082781456954,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428110,,,train,sda-all,samples/GSE315435/GSM9428110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428111,GSE315435,GSE315435,Rhythmic nephron formation in the developing kidney,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,human fetal kidney,primary tissue,,,normal,luna,,wild-type,fetal,luna,fetal,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,433710,9691,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054808535516,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428111,,,train,sda-all,samples/GSE315435/GSM9428111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9429345,GSE315482,GSE315482,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,sham operation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1925,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.097089121608903,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9429345,,,train,sda-all,samples/GSE315482/GSM9429345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429346,GSE315482,GSE315482,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,sham operation,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,2844,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.101299961484699,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9429346,,,train,sda-all,samples/GSE315482/GSM9429346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429347,GSE315482,GSE315482,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005203,ischemia reperfusion injury,disease,mondo_predicate (Luna: perturbation),,ischemia-reperfusion injury (60min ischemia/6h reperfusion),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,3438,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.222850592747951,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9429347,,,train,sda-all,samples/GSE315482/GSM9429347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429348,GSE315482,GSE315482,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005203,ischemia reperfusion injury,disease,luna,,ischemia-reperfusion injury (60min ischemia/6h reperfusion),not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1474,32285,counts,um,1.0,verified,True,H&E-like (heuristic),5.229300808556978,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9429348,,,train,sda-all,samples/GSE315482/GSM9429348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429458,GSE315487,GSE315487,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,uberon_chain,UBERON:0002367,prostate gland,prostate cancer,xenograft,MONDO:0008315,prostate cancer,disease,luna,,Veh,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,3729,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9429458,,,train,sda-all,samples/GSE315487/GSM9429458,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 0.65, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9429459,GSE315487,GSE315487,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,manual,,,prostate cancer,xenograft,MONDO:0008315,prostate cancer,disease,luna,,Olaparib,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,3864,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9429459,,,train,sda-all,samples/GSE315487/GSM9429459,sda-tissue-disease-2.3,"{""organ"": null, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.87, ""uberon"": null, ""life_stage"": 1.0}",,
GSM9429460,GSE315487,GSE315487,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,uberon_chain,UBERON:0002367,prostate gland,prostate cancer,xenograft,MONDO:0008315,prostate cancer,disease,luna,,a-CD73,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1992,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9429460,,,train,sda-all,samples/GSE315487/GSM9429460,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.89, ""disease_status"": 0.93, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM9429461,GSE315487,GSE315487,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,prostate,uberon_chain,UBERON:0002367,prostate gland,prostate cancer,xenograft,MONDO:0008315,prostate cancer,disease,luna,,Combination,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,3608,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9429461,,,train,sda-all,samples/GSE315487/GSM9429461,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.88, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.97}",,
GSM9431064,GSE315553,GSE315553,Spatial Transcriptomics Data from Human Choroid Plexus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001886,choroid plexus,Choroid Plexus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,21331,16662,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431064,,,val,sda-all,samples/GSE315553/GSM9431064,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9431065,GSE315553,GSE315553,Spatial Transcriptomics Data from Human Choroid Plexus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001886,choroid plexus,Choroid Plexus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,58459,24931,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431065,,,val,sda-all,samples/GSE315553/GSM9431065,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9431066,GSE315553,GSE315553,Spatial Transcriptomics Data from Human Choroid Plexus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001886,choroid plexus,Choroid Plexus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,10022,13122,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431066,,,val,sda-all,samples/GSE315553/GSM9431066,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9431067,GSE315553,GSE315553,Spatial Transcriptomics Data from Human Choroid Plexus,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,uberon_chain,UBERON:0001886,choroid plexus,Choroid Plexus,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,8173,18343,counts,pixel,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431067,,,val,sda-all,samples/GSE315553/GSM9431067,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9439591,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,452,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439591,,,train,sda-all,samples/GSE315907/GSM9439591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439592,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,615,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439592,,,train,sda-all,samples/GSE315907/GSM9439592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439593,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,526,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439593,,,train,sda-all,samples/GSE315907/GSM9439593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439594,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,553,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439594,,,train,sda-all,samples/GSE315907/GSM9439594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM9439595,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,611,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439595,,,train,sda-all,samples/GSE315907/GSM9439595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.62}",,
GSM9439596,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,681,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439596,,,train,sda-all,samples/GSE315907/GSM9439596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439597,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,549,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439597,,,train,sda-all,samples/GSE315907/GSM9439597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM9439598,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,529,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439598,,,train,sda-all,samples/GSE315907/GSM9439598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM9439599,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,574,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439599,,,train,sda-all,samples/GSE315907/GSM9439599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.79}",,
GSM9439600,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,602,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439600,,,train,sda-all,samples/GSE315907/GSM9439600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439601,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,568,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439601,,,train,sda-all,samples/GSE315907/GSM9439601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM9439602,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,642,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439602,,,train,sda-all,samples/GSE315907/GSM9439602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439603,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,542,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439603,,,train,sda-all,samples/GSE315907/GSM9439603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439604,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,512,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439604,,,train,sda-all,samples/GSE315907/GSM9439604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439605,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,561,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439605,,,train,sda-all,samples/GSE315907/GSM9439605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439606,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,565,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439606,,,train,sda-all,samples/GSE315907/GSM9439606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439607,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,818,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439607,,,train,sda-all,samples/GSE315907/GSM9439607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439608,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,879,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439608,,,train,sda-all,samples/GSE315907/GSM9439608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439609,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,663,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439609,,,train,sda-all,samples/GSE315907/GSM9439609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439610,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,682,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439610,,,train,sda-all,samples/GSE315907/GSM9439610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439611,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,551,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439611,,,train,sda-all,samples/GSE315907/GSM9439611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439612,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,924,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439612,,,train,sda-all,samples/GSE315907/GSM9439612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439613,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,814,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439613,,,train,sda-all,samples/GSE315907/GSM9439613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439614,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,865,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439614,,,train,sda-all,samples/GSE315907/GSM9439614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439615,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1878,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439615,,,train,sda-all,samples/GSE315907/GSM9439615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439616,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,875,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439616,,,train,sda-all,samples/GSE315907/GSM9439616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439617,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,812,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439617,,,train,sda-all,samples/GSE315907/GSM9439617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439618,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,894,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439618,,,train,sda-all,samples/GSE315907/GSM9439618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439619,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,897,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439619,,,train,sda-all,samples/GSE315907/GSM9439619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM9439620,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,828,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439620,,,train,sda-all,samples/GSE315907/GSM9439620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439621,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,831,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439621,,,train,sda-all,samples/GSE315907/GSM9439621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9439622,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,784,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439622,,,train,sda-all,samples/GSE315907/GSM9439622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9439623,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,893,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439623,,,train,sda-all,samples/GSE315907/GSM9439623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9439624,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,755,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439624,,,train,sda-all,samples/GSE315907/GSM9439624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM9439625,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,819,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439625,,,train,sda-all,samples/GSE315907/GSM9439625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9439626,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,736,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439626,,,train,sda-all,samples/GSE315907/GSM9439626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9439627,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,701,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439627,,,train,sda-all,samples/GSE315907/GSM9439627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.67}",,
GSM9439628,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,682,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439628,,,train,sda-all,samples/GSE315907/GSM9439628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9439629,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,738,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439629,,,train,sda-all,samples/GSE315907/GSM9439629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.46}",disease_status;life_stage,low_confidence_annotation
GSM9439630,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,743,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439630,,,train,sda-all,samples/GSE315907/GSM9439630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.65}",disease_status,low_confidence_annotation
GSM9439631,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,713,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439631,,,train,sda-all,samples/GSE315907/GSM9439631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9439632,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,751,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439632,,,train,sda-all,samples/GSE315907/GSM9439632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9439633,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,774,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439633,,,train,sda-all,samples/GSE315907/GSM9439633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.65}",,
GSM9439634,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,804,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439634,,,train,sda-all,samples/GSE315907/GSM9439634,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439635,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,717,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439635,,,train,sda-all,samples/GSE315907/GSM9439635,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439636,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,714,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439636,,,train,sda-all,samples/GSE315907/GSM9439636,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439637,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,753,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439637,,,train,sda-all,samples/GSE315907/GSM9439637,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439638,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,699,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439638,,,train,sda-all,samples/GSE315907/GSM9439638,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439639,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,669,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439639,,,train,sda-all,samples/GSE315907/GSM9439639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439640,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,774,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439640,,,train,sda-all,samples/GSE315907/GSM9439640,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439641,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,678,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439641,,,train,sda-all,samples/GSE315907/GSM9439641,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439642,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,672,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439642,,,train,sda-all,samples/GSE315907/GSM9439642,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439643,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,787,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439643,,,train,sda-all,samples/GSE315907/GSM9439643,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439644,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,574,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439644,,,train,sda-all,samples/GSE315907/GSM9439644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439645,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,648,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439645,,,train,sda-all,samples/GSE315907/GSM9439645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM9439646,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,665,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439646,,,train,sda-all,samples/GSE315907/GSM9439646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9439647,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,518,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439647,,,train,sda-all,samples/GSE315907/GSM9439647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439648,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,600,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439648,,,train,sda-all,samples/GSE315907/GSM9439648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439649,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,519,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439649,,,train,sda-all,samples/GSE315907/GSM9439649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9439650,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,560,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439650,,,train,sda-all,samples/GSE315907/GSM9439650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM9439651,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,730,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439651,,,train,sda-all,samples/GSE315907/GSM9439651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439652,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,714,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439652,,,train,sda-all,samples/GSE315907/GSM9439652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439653,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,713,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439653,,,train,sda-all,samples/GSE315907/GSM9439653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439654,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,714,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439654,,,train,sda-all,samples/GSE315907/GSM9439654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439655,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,670,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439655,,,train,sda-all,samples/GSE315907/GSM9439655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439656,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,657,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439656,,,train,sda-all,samples/GSE315907/GSM9439656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439657,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,611,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439657,,,train,sda-all,samples/GSE315907/GSM9439657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439658,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,627,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439658,,,train,sda-all,samples/GSE315907/GSM9439658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439659,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,575,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439659,,,train,sda-all,samples/GSE315907/GSM9439659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439660,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,656,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439660,,,train,sda-all,samples/GSE315907/GSM9439660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439661,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,748,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439661,,,train,sda-all,samples/GSE315907/GSM9439661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9439662,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,857,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439662,,,train,sda-all,samples/GSE315907/GSM9439662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM9439663,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,874,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439663,,,train,sda-all,samples/GSE315907/GSM9439663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439664,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,860,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439664,,,train,sda-all,samples/GSE315907/GSM9439664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439665,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,927,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439665,,,train,sda-all,samples/GSE315907/GSM9439665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9439666,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,831,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439666,,,train,sda-all,samples/GSE315907/GSM9439666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9439667,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,961,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439667,,,train,sda-all,samples/GSE315907/GSM9439667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9439668,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,884,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439668,,,train,sda-all,samples/GSE315907/GSM9439668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9439669,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,961,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439669,,,train,sda-all,samples/GSE315907/GSM9439669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439670,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,900,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439670,,,train,sda-all,samples/GSE315907/GSM9439670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439671,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,739,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439671,,,train,sda-all,samples/GSE315907/GSM9439671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439672,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,869,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439672,,,train,sda-all,samples/GSE315907/GSM9439672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439673,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,845,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439673,,,train,sda-all,samples/GSE315907/GSM9439673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439674,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1162,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439674,,,train,sda-all,samples/GSE315907/GSM9439674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439675,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,830,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439675,,,train,sda-all,samples/GSE315907/GSM9439675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439676,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,916,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439676,,,train,sda-all,samples/GSE315907/GSM9439676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439677,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,859,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439677,,,train,sda-all,samples/GSE315907/GSM9439677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439678,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,921,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439678,,,train,sda-all,samples/GSE315907/GSM9439678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439679,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,744,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439679,,,train,sda-all,samples/GSE315907/GSM9439679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9439680,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,758,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439680,,,train,sda-all,samples/GSE315907/GSM9439680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9439681,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,779,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439681,,,train,sda-all,samples/GSE315907/GSM9439681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9439682,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,796,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439682,,,train,sda-all,samples/GSE315907/GSM9439682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439683,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,774,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439683,,,train,sda-all,samples/GSE315907/GSM9439683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.38}",disease_status;life_stage,low_confidence_annotation
GSM9439684,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,724,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439684,,,train,sda-all,samples/GSE315907/GSM9439684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM9439685,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,752,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439685,,,train,sda-all,samples/GSE315907/GSM9439685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.51}",disease_status;life_stage,low_confidence_annotation
GSM9439686,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,659,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439686,,,train,sda-all,samples/GSE315907/GSM9439686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439687,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,639,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439687,,,train,sda-all,samples/GSE315907/GSM9439687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439688,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,695,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439688,,,train,sda-all,samples/GSE315907/GSM9439688,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439689,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,706,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439689,,,train,sda-all,samples/GSE315907/GSM9439689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439690,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,697,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439690,,,train,sda-all,samples/GSE315907/GSM9439690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439691,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,699,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439691,,,train,sda-all,samples/GSE315907/GSM9439691,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439692,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,692,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439692,,,train,sda-all,samples/GSE315907/GSM9439692,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439693,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,716,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439693,,,train,sda-all,samples/GSE315907/GSM9439693,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439694,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,655,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439694,,,train,sda-all,samples/GSE315907/GSM9439694,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439695,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,536,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439695,,,train,sda-all,samples/GSE315907/GSM9439695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM9439696,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,472,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439696,,,train,sda-all,samples/GSE315907/GSM9439696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9439697,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,504,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439697,,,train,sda-all,samples/GSE315907/GSM9439697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9439698,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,781,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439698,,,train,sda-all,samples/GSE315907/GSM9439698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9439699,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,627,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439699,,,train,sda-all,samples/GSE315907/GSM9439699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM9439700,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,570,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439700,,,train,sda-all,samples/GSE315907/GSM9439700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9439701,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,517,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439701,,,train,sda-all,samples/GSE315907/GSM9439701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9439702,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,651,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439702,,,train,sda-all,samples/GSE315907/GSM9439702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM9439703,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,680,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439703,,,train,sda-all,samples/GSE315907/GSM9439703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439704,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,732,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439704,,,train,sda-all,samples/GSE315907/GSM9439704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439705,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,718,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439705,,,train,sda-all,samples/GSE315907/GSM9439705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439706,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,730,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439706,,,train,sda-all,samples/GSE315907/GSM9439706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439707,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,768,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439707,,,train,sda-all,samples/GSE315907/GSM9439707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439708,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,832,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439708,,,train,sda-all,samples/GSE315907/GSM9439708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439709,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,747,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439709,,,train,sda-all,samples/GSE315907/GSM9439709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439710,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,PtenKO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,800,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439710,,,train,sda-all,samples/GSE315907/GSM9439710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439711,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,782,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439711,,,train,sda-all,samples/GSE315907/GSM9439711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.36}",disease_status;life_stage,low_confidence_annotation
GSM9439712,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,775,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439712,,,train,sda-all,samples/GSE315907/GSM9439712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439713,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,683,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439713,,,train,sda-all,samples/GSE315907/GSM9439713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439714,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,693,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439714,,,train,sda-all,samples/GSE315907/GSM9439714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9439715,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,801,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439715,,,train,sda-all,samples/GSE315907/GSM9439715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM9439716,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,756,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439716,,,train,sda-all,samples/GSE315907/GSM9439716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9439717,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,905,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439717,,,train,sda-all,samples/GSE315907/GSM9439717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.63}",disease_status,low_confidence_annotation
GSM9439718,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,852,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439718,,,train,sda-all,samples/GSE315907/GSM9439718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM9439719,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,812,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439719,,,train,sda-all,samples/GSE315907/GSM9439719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439720,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,751,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439720,,,train,sda-all,samples/GSE315907/GSM9439720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439721,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,702,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439721,,,train,sda-all,samples/GSE315907/GSM9439721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439722,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,714,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439722,,,train,sda-all,samples/GSE315907/GSM9439722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439723,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,725,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439723,,,train,sda-all,samples/GSE315907/GSM9439723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439724,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,859,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439724,,,train,sda-all,samples/GSE315907/GSM9439724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439725,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,759,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439725,,,train,sda-all,samples/GSE315907/GSM9439725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439726,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,787,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439726,,,train,sda-all,samples/GSE315907/GSM9439726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439727,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,p53KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,781,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439727,,,train,sda-all,samples/GSE315907/GSM9439727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439728,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,651,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439728,,,train,sda-all,samples/GSE315907/GSM9439728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9439729,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,655,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439729,,,train,sda-all,samples/GSE315907/GSM9439729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9439730,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,650,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439730,,,train,sda-all,samples/GSE315907/GSM9439730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.48}",disease_status;life_stage,low_confidence_annotation
GSM9439731,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,681,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439731,,,train,sda-all,samples/GSE315907/GSM9439731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439732,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,juvenile,luna,juvenile,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,706,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439732,,,train,sda-all,samples/GSE315907/GSM9439732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM9439733,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,adult,luna,adult,Young,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,676,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439733,,,train,sda-all,samples/GSE315907/GSM9439733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9439734,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,789,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439734,,,train,sda-all,samples/GSE315907/GSM9439734,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439735,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,719,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439735,,,train,sda-all,samples/GSE315907/GSM9439735,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439736,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,698,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439736,,,train,sda-all,samples/GSE315907/GSM9439736,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439737,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,859,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439737,,,train,sda-all,samples/GSE315907/GSM9439737,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439738,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,860,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439738,,,train,sda-all,samples/GSE315907/GSM9439738,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439739,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,888,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439739,,,train,sda-all,samples/GSE315907/GSM9439739,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439740,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,Rosa26KO,aged,luna,aged,Old,male,extracted field,Male,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,839,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439740,,,train,sda-all,samples/GSE315907/GSM9439740,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439741,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1354,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439741,,,train,sda-all,samples/GSE315907/GSM9439741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439742,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,957,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439742,,,train,sda-all,samples/GSE315907/GSM9439742,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439743,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,872,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439743,,,train,sda-all,samples/GSE315907/GSM9439743,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439744,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,890,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439744,,,train,sda-all,samples/GSE315907/GSM9439744,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439745,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,986,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439745,,,train,sda-all,samples/GSE315907/GSM9439745,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439746,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,912,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439746,,,train,sda-all,samples/GSE315907/GSM9439746,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439747,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,846,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439747,,,train,sda-all,samples/GSE315907/GSM9439747,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439748,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,860,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439748,,,train,sda-all,samples/GSE315907/GSM9439748,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439749,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1270,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439749,,,train,sda-all,samples/GSE315907/GSM9439749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439750,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,968,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439750,,,train,sda-all,samples/GSE315907/GSM9439750,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439751,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1001,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439751,,,train,sda-all,samples/GSE315907/GSM9439751,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439752,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,822,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439752,,,train,sda-all,samples/GSE315907/GSM9439752,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439753,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,889,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439753,,,train,sda-all,samples/GSE315907/GSM9439753,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439754,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,916,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439754,,,train,sda-all,samples/GSE315907/GSM9439754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439755,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,817,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439755,,,train,sda-all,samples/GSE315907/GSM9439755,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439756,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,perturbation,luna,,HDM,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,872,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439756,,,train,sda-all,samples/GSE315907/GSM9439756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439757,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1100,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439757,,,train,sda-all,samples/GSE315907/GSM9439757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439758,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,981,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439758,,,train,sda-all,samples/GSE315907/GSM9439758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439759,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,855,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439759,,,train,sda-all,samples/GSE315907/GSM9439759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439760,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,894,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439760,,,train,sda-all,samples/GSE315907/GSM9439760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9439761,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,878,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439761,,,train,sda-all,samples/GSE315907/GSM9439761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9439762,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,907,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439762,,,train,sda-all,samples/GSE315907/GSM9439762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9439763,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,836,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439763,,,train,sda-all,samples/GSE315907/GSM9439763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439764,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,887,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439764,,,train,sda-all,samples/GSE315907/GSM9439764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9439765,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,823,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439765,,,train,sda-all,samples/GSE315907/GSM9439765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439766,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,858,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439766,,,train,sda-all,samples/GSE315907/GSM9439766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439767,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,738,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439767,,,train,sda-all,samples/GSE315907/GSM9439767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9439768,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,743,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439768,,,train,sda-all,samples/GSE315907/GSM9439768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9439769,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,796,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439769,,,train,sda-all,samples/GSE315907/GSM9439769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439770,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,798,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439770,,,train,sda-all,samples/GSE315907/GSM9439770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9439771,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,744,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439771,,,train,sda-all,samples/GSE315907/GSM9439771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439772,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,704,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439772,,,train,sda-all,samples/GSE315907/GSM9439772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9439773,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,aged,luna,aged,Old,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,678,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439773,,,train,sda-all,samples/GSE315907/GSM9439773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439774,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1004,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439774,,,train,sda-all,samples/GSE315907/GSM9439774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9439775,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,juvenile,luna,juvenile,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,981,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439775,,,train,sda-all,samples/GSE315907/GSM9439775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM9439776,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1067,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439776,,,train,sda-all,samples/GSE315907/GSM9439776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM9439777,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,juvenile,luna,juvenile,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1027,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439777,,,train,sda-all,samples/GSE315907/GSM9439777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM9439778,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,997,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439778,,,train,sda-all,samples/GSE315907/GSM9439778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9439779,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,945,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439779,,,train,sda-all,samples/GSE315907/GSM9439779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9439780,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,998,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439780,,,train,sda-all,samples/GSE315907/GSM9439780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9439781,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1032,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439781,,,train,sda-all,samples/GSE315907/GSM9439781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9439782,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1027,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439782,,,train,sda-all,samples/GSE315907/GSM9439782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM9439783,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,964,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439783,,,train,sda-all,samples/GSE315907/GSM9439783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9439784,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1037,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439784,,,train,sda-all,samples/GSE315907/GSM9439784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439785,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,902,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439785,,,train,sda-all,samples/GSE315907/GSM9439785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9439786,GSE315907,GSE315907,p53 maintains healthy aging,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,whole liver,primary tissue,,,normal,luna,,Veh,adult,luna,adult,Young,female,extracted field,Female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1017,1010,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439786,,,train,sda-all,samples/GSE315907/GSM9439786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9450633,GSE316346,GSE316346,TGFβ1 and Oncostatin M promotes the organization of two distinct stromal niches controlling different EMT states [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0002616,mesenchymal cell neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,415565,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998968391516047,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9450633,,,train,sda-all,samples/GSE316346/GSM9450633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9927082,GSE316346,GSE316346,TGFβ1 and Oncostatin M promotes the organization of two distinct stromal niches controlling different EMT states [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0002616,mesenchymal cell neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,821319,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999868987202118,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927082,,,train,sda-all,samples/GSE316346/GSM9927082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9451441,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105;MONDO:0018975,melanoma;neurofibromatosis type 1,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19297,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451441,,,train,sda-all,samples/GSE316387/GSM9451441,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451442,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,136728,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000038076588338,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451442,,,train,sda-all,samples/GSE316387/GSM9451442,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9451444,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,140949,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961908493318,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451444,,,train,sda-all,samples/GSE316387/GSM9451444,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9451445,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,86282,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999183397935637,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451445,,,train,sda-all,samples/GSE316387/GSM9451445,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9451447,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,102723,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000038133007931,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451447,,,train,sda-all,samples/GSE316387/GSM9451447,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9451448,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,101400,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999891096009763,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451448,,,train,sda-all,samples/GSE316387/GSM9451448,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9451450,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,106573,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999901973598222,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451450,,,train,sda-all,samples/GSE316387/GSM9451450,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9451453,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,73412,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451453,,,train,sda-all,samples/GSE316387/GSM9451453,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451454,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,44029,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000080201649862,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451454,,,train,sda-all,samples/GSE316387/GSM9451454,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451455,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,17548,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068194217131,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451455,,,train,sda-all,samples/GSE316387/GSM9451455,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451456,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47962,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998972715318857,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451456,,,train,sda-all,samples/GSE316387/GSM9451456,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9451457,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27031,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000485685071575,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451457,,,train,sda-all,samples/GSE316387/GSM9451457,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9451458,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57936,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000029550827423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451458,,,train,sda-all,samples/GSE316387/GSM9451458,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9451459,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,103598,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999926114197885,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451459,,,train,sda-all,samples/GSE316387/GSM9451459,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.89, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451460,GSE316387,GSE316387,Xenium Analysis of Melanoma FFPE,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Melanoma,tumour tissue,MONDO:0005105,melanoma,disease,luna,,No_Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52716,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054456739567,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451460,,,train,sda-all,samples/GSE316387/GSM9451460,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9451525,GSE316390,GSE316390,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,725,18085,counts,pixel,3.9080483329398836,platform_constant,True,H&E,3.9080483329398836,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9451525,,,train,hesrt,samples/GSE316390/GSM9451525,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9451526,GSE316390,GSE316390,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4261,18085,counts,pixel,3.4866204968552656,platform_constant,True,H&E,3.4866204968552656,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM9451526,,,train,hesrt,samples/GSE316390/GSM9451526,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9451527,GSE316390,GSE316390,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4779,18085,counts,pixel,3.5017502136341125,platform_constant,True,H&E,3.5017502136341125,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM9451527,,,train,hesrt,samples/GSE316390/GSM9451527,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9451528,GSE316390,GSE316390,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,human coronary artery,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3146,18085,counts,pixel,3.9080483329398836,platform_constant,True,H&E,3.9080483329398836,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9451528,,,train,hesrt,samples/GSE316390/GSM9451528,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9456973,GSE316618,GSE316618,Clonal memory of colitis accumulates and promotes tumor growth [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0000397,colonic epithelium,colon,tumour tissue,MONDO:0000527,colon adenoma,disease,luna,adenoma,control,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,99258,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41882356,,GSM9456973,,,train,hesrt,samples/GSE316618/GSM9456973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.71, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9456974,GSE316618,GSE316618,Clonal memory of colitis accumulates and promotes tumor growth [Visium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0000397,colonic epithelium,colon,tumour tissue,MONDO:0000527;MONDO:0005292,colon adenoma;colitis,disease,luna,adenoma,colitis recovered,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,99154,19059,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41882356,,GSM9456974,,,train,hesrt,samples/GSE316618/GSM9456974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9457930,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,139806,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457930,,,train,sda-all,samples/GSE316662/GSM9457930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9457931,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,125554,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000325922876355,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457931,,,train,sda-all,samples/GSE316662/GSM9457931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9457932,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,214768,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000257785110332,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457932,,,train,sda-all,samples/GSE316662/GSM9457932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9457933,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,221278,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999974216171617,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457933,,,train,sda-all,samples/GSE316662/GSM9457933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM9457934,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,389349,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999911420810204,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457934,,,train,sda-all,samples/GSE316662/GSM9457934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM9457935,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,367168,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999984107812599,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457935,,,train,sda-all,samples/GSE316662/GSM9457935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9457936,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,462894,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999864864864865,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457936,,,train,sda-all,samples/GSE316662/GSM9457936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9457937,GSE316662,GSE316662,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,Uterus,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541215,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000125502008033,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457937,,,train,sda-all,samples/GSE316662/GSM9457937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM9459774,GSE316760,GSE316760,Spatial transcriptomics of primary cutaneous melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous melanoma,tumour tissue,MONDO:0005012,cutaneous melanoma,disease,luna,melanoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4084,17943,counts,pixel,4.026776726360003,platform_constant,True,H&E,4.026776726360003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9459774,,,val,hesrt,samples/GSE316760/GSM9459774,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9459775,GSE316760,GSE316760,Spatial transcriptomics of primary cutaneous melanoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous melanoma,tumour tissue,MONDO:0005012,cutaneous melanoma,disease,luna,melanoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4949,17943,counts,pixel,4.026559828084776,platform_constant,True,H&E,4.026559828084776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9459775,,,val,hesrt,samples/GSE316760/GSM9459775,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9460277,GSE316789,GSE316789,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,Graft interface,primary tissue,,,perturbation,luna,,Grafting,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,not named in GEO,sequencing-based,other,,,bin,7101,83029,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9460277,,,train,sda-all,samples/GSE316789/GSM9460277,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.87, ""disease_status"": 0.43, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460278,GSE316789,GSE316789,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,Graft interface,primary tissue,,,normal,luna,,Grafting,not stated,luna,not stated,,unknown,not stated,,,,,,Other,release v3,not named in GEO,sequencing-based,other,,,bin,7101,83027,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9460278,,,train,sda-all,samples/GSE316789/GSM9460278,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.33, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460279,GSE316789,GSE316789,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,Wild type,embryonic,luna,embryonic,,unknown,not stated,,,,,,Other,release v3,not named in GEO,sequencing-based,other,,,bin,53691,54838,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9460279,,,train,sda-all,samples/GSE316789/GSM9460279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9460280,GSE316789,GSE316789,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,embryo (whole),luna,UBERON:0000922,embryo,Embryo,whole embryo/organism,,,normal,luna,,Wild type,embryonic,luna,embryonic,,unknown,not stated,,,,,,Other,release v3,not named in GEO,sequencing-based,other,,,bin,51277,54752,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9460280,,,train,sda-all,samples/GSE316789/GSM9460280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9460386,GSE316800,GSE316800,Stretching inhibits tumor growth in MMTV-PYMT via a direct mechanical effect,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,breast,luna,UBERON:0001911,mammary gland,mammary tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,Stretch and No Stretch,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1216979,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000076166434541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9460386,,,train,sda-all,samples/GSE316800/GSM9460386,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462339,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,50,male,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,467803,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499996522222995,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462339,,,train,sda-all,samples/GSE316917/GSM9462339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462340,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,50,male,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,366739,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999850906488547,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462340,,,train,sda-all,samples/GSE316917/GSM9462340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462341,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,50,male,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54166,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999941023826374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462341,,,train,sda-all,samples/GSE316917/GSM9462341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462342,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,adult,age rule: bare number read as years,adult,50,male,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,711466,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999386623484965,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462342,,,train,sda-all,samples/GSE316917/GSM9462342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9462343,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,68,male,extracted field,Male,GSE316917:GBM030,GBM030,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,213970,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000185935046689,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462343,,,train,sda-all,samples/GSE316917/GSM9462343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9462344,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,68,male,extracted field,Male,GSE316917:GBM026,GBM026,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,80375,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214877,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462344,,,train,sda-all,samples/GSE316917/GSM9462344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9462345,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,65,male,extracted field,Male,GSE316917:GBM034,GBM034,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,163126,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000028191249436,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462345,,,train,sda-all,samples/GSE316917/GSM9462345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9462346,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,68,male,extracted field,Male,GSE316917:GBM026,GBM026,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,102625,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999630461774963,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462346,,,train,sda-all,samples/GSE316917/GSM9462346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9462347,GSE316917,GSE316917,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,aged,age rule: bare number read as years,aged,73,male,extracted field,Male,GSE316917:GBM025,GBM025,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117714,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999972427484283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462347,,,train,sda-all,samples/GSE316917/GSM9462347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9464516,GSE317062+GSE317063,GSE317062,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,25224,27439,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464516,,,train,sda-all,samples/GSE317062/GSM9464516,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9464517,GSE317062+GSE317063,GSE317062,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,disease,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,15207,25921,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464517,,,train,sda-all,samples/GSE317062/GSM9464517,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9464518,GSE317062+GSE317063,GSE317062,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,disease,luna,,SAP,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,23840,26958,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464518,,,train,sda-all,samples/GSE317062/GSM9464518,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9464519,GSE317062+GSE317063,GSE317062,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,disease,luna,,SAP,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,22966,26644,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464519,,,train,sda-all,samples/GSE317062/GSM9464519,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9465382,GSE317119,GSE317119,A generative AI-designed vascular liner prevents restenosis,Oryctolagus cuniculus,9986,rabbit,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,blood vessel,luna,UBERON:0005609,iliac artery,iliac artery,primary tissue,,,perturbation,luna,,G/GM/P-S@H group,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,4565,17329,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9465382,,,train,sda-all,samples/GSE317119/GSM9465382,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9465383,GSE317119,GSE317119,A generative AI-designed vascular liner prevents restenosis,Oryctolagus cuniculus,9986,rabbit,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,blood vessel,luna,UBERON:0005609,iliac artery,iliac artery,primary tissue,,,perturbation,luna,,BRS group,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,5258,21033,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9465383,,,train,sda-all,samples/GSE317119/GSM9465383,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9467249,GSE317226,GSE317226,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240;MONDO:0005148,kidney disorder;type 2 diabetes mellitus,disease,luna,type 2 diabetes,pre-SGLT2i,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,46971,37082,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467249,,,val,hesrt,samples/GSE317226/GSM9467249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9467250,GSE317226,GSE317226,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240;MONDO:0005148,kidney disorder;type 2 diabetes mellitus,disease,luna,type 2 diabetes,pre-SGLT2i,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,53169,37082,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467250,,,val,hesrt,samples/GSE317226/GSM9467250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9467251,GSE317226,GSE317226,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240;MONDO:0005148,kidney disorder;type 2 diabetes mellitus,disease,luna,type 2 diabetes,pre-SGLT2i,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,40388,37082,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467251,,,val,hesrt,samples/GSE317226/GSM9467251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9467252,GSE317226,GSE317226,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0005240;MONDO:0005148,kidney disorder;type 2 diabetes mellitus,disease,luna,type 2 diabetes,pre-SGLT2i,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,77982,37082,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467252,,,val,hesrt,samples/GSE317226/GSM9467252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9468882,GSE317297,GSE317297,Multicellular origins of ovarian inflammaging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,21403,21091,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9468882,,,train,sda-all,samples/GSE317297/GSM9468882,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9468883,GSE317297,GSE317297,Multicellular origins of ovarian inflammaging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,aged,luna,aged,,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,slide-seq,,,bead,10267,18394,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9468883,,,train,sda-all,samples/GSE317297/GSM9468883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9471154,GSE317379,GSE317379,spaTransfer: transfer learning for single-cell and spatial  transcriptomics data using non-negative matrix factorization,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,dlPFC,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,160995,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999993914017235,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471154,,,val,sda-all,samples/GSE317379/GSM9471154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9471155,GSE317379,GSE317379,spaTransfer: transfer learning for single-cell and spatial  transcriptomics data using non-negative matrix factorization,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,dlPFC,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,157073,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999908745802306,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471155,,,val,sda-all,samples/GSE317379/GSM9471155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9471164,GSE317381,GSE317381,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,dentate gyrus (DG),primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117594,10496,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000108572917572,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471164,,,train,sda-all,samples/GSE317381/GSM9471164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9471165,GSE317381,GSE317381,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,dentate gyrus (DG),primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,129304,10496,counts,um,1.0,verified,True,fluorescence: DAPI,0.500007627931305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471165,,,train,sda-all,samples/GSE317381/GSM9471165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9471166,GSE317381,GSE317381,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,dentate gyrus (DG),primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63657,10496,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999888369856426,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471166,,,train,sda-all,samples/GSE317381/GSM9471166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM9471167,GSE317381,GSE317381,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001885,dentate gyrus of hippocampal formation,dentate gyrus (DG),primary tissue,,,normal,luna,,,aged,luna,aged,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,221776,10496,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000037824752518,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471167,,,train,sda-all,samples/GSE317381/GSM9471167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM9452684,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:30,30,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,431,33538,counts,pixel,4.436110943869717,platform_constant,True,H&E,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452684,,,train,hesrt,samples/GSE317606/GSM9452684,sda-tissue-disease-2.3,"{""organ"": 0.41000000000000003, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9452685,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:30,30,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,145,33538,counts,pixel,4.436110943869717,platform_constant,True,H&E,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452685,,,train,hesrt,samples/GSE317606/GSM9452685,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9452686,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:38,38,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,453,33538,counts,pixel,4.436026429615547,platform_constant,True,H&E,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452686,,,train,hesrt,samples/GSE317606/GSM9452686,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9452687,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:38,38,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,245,33538,counts,pixel,4.436026429615547,platform_constant,True,H&E,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452687,,,train,hesrt,samples/GSE317606/GSM9452687,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9452688,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:41,41,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,536,33538,counts,pixel,4.436110943869717,platform_constant,True,H&E,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452688,,,train,hesrt,samples/GSE317606/GSM9452688,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9452689,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:41,41,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1040,33538,counts,pixel,4.436110943869717,platform_constant,True,H&E,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452689,,,train,hesrt,samples/GSE317606/GSM9452689,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9452690,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:42,42,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,143,33538,counts,pixel,4.436026429615547,platform_constant,True,H&E,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452690,,,train,hesrt,samples/GSE317606/GSM9452690,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9452691,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:42,42,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,996,33538,counts,pixel,4.436026429615547,platform_constant,True,H&E,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452691,,,train,hesrt,samples/GSE317606/GSM9452691,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9452692,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:43,43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,694,33538,counts,pixel,4.436110943869717,platform_constant,True,H&E,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452692,,,train,hesrt,samples/GSE317606/GSM9452692,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM9452693,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:43,43,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,886,33538,counts,pixel,4.436110943869717,platform_constant,True,H&E,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452693,,,train,hesrt,samples/GSE317606/GSM9452693,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9452694,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,UBERON:0001173,biliary tree,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:44,44,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1274,33538,counts,pixel,4.539455922523668,platform_constant,True,H&E,4.539455922523668,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452694,,,train,hesrt,samples/GSE317606/GSM9452694,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9452695,GSE317606,GSE317606,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Biliary tract cancer (BTC),tumour tissue,MONDO:0003060,biliary tract cancer,disease,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",not stated,luna,not stated,,unknown,not stated,,GSE317606:44,44,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,548,33538,counts,pixel,4.544703416878741,platform_constant,True,H&E,4.544703416878741,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452695,,,train,hesrt,samples/GSE317606/GSM9452695,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9477704,GSE317755,GSE317755,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory Bulb,primary tissue,,,normal,luna,,Adult,adult,luna,adult,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,11885,35803,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9477704,,,test,sda-all,samples/GSE317755/GSM9477704,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9477706,GSE317755,GSE317755,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,brain,luna,UBERON:0001895,metencephalon,Metencephalon,primary tissue,,,normal,luna,,Adult,adult,luna,adult,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,6353,26414,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9477706,,,test,sda-all,samples/GSE317755/GSM9477706,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9477707,GSE317755,GSE317755,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,brain,luna,UBERON:0001893,telencephalon,Telencephalon,primary tissue,,,normal,luna,,Adult,adult,luna,adult,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,5975,28553,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9477707,,,test,sda-all,samples/GSE317755/GSM9477707,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9477709,GSE317755,GSE317755,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,brain,luna,UBERON:0001894,diencephalon,Diencephalon,primary tissue,,,normal,luna,,Adult,adult,luna,adult,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,15632,30876,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9477709,,,test,sda-all,samples/GSE317755/GSM9477709,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9477711,GSE317755,GSE317755,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,brain,luna,UBERON:0002264,olfactory bulb,Olfactory Bulb,primary tissue,,,normal,luna,,Metamorphosis,adult,luna,adult,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,16101,29822,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9477711,,,test,sda-all,samples/GSE317755/GSM9477711,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9477713,GSE317755,GSE317755,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,brain,luna,UBERON:0001894,diencephalon,Diencephalon,primary tissue,,,normal,luna,,Metamorphosis,adult,luna,adult,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,12099,33975,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9477713,,,test,sda-all,samples/GSE317755/GSM9477713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9483972,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,non-lesional,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,401,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.13871408512286,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483972,,,train,sda-all,samples/GSE317987/GSM9483972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9483973,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005446,cutaneous leishmaniasis,disease,luna,,Clinical infection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,839,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.306494288718998,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483973,,,train,sda-all,samples/GSE317987/GSM9483973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483974,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,non-lesional,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,368,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.3129480551305965,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483974,,,train,sda-all,samples/GSE317987/GSM9483974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483975,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005446,cutaneous leishmaniasis,disease,luna,,Clinical infection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,544,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.301075911841473,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483975,,,train,sda-all,samples/GSE317987/GSM9483975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 0.76}",uberon,low_confidence_annotation
GSM9483976,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,non-lesional,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,243,17943,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.17044350616364,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483976,,,train,sda-all,samples/GSE317987/GSM9483976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483977,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005446,cutaneous leishmaniasis,disease,luna,,Clinical infection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,870,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.173633463431575,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483977,,,train,sda-all,samples/GSE317987/GSM9483977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483978,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,non-lesional,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,361,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.181553327547662,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483978,,,train,sda-all,samples/GSE317987/GSM9483978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483979,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005446,cutaneous leishmaniasis,disease,luna,,Clinical infection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1199,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.166735328951941,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483979,,,train,sda-all,samples/GSE317987/GSM9483979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483980,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,normal,luna,,non-lesional,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,215,17943,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.181359736050901,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483980,,,train,sda-all,samples/GSE317987/GSM9483980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9483981,GSE317987,GSE317987,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005446,cutaneous leishmaniasis,disease,luna,,Clinical infection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,538,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.299931232567945,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483981,,,train,sda-all,samples/GSE317987/GSM9483981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9485172,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3458,36601,counts,um,1.0,verified,True,H&E,4.464700034336645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485172,,,train,sda-all,samples/GSE318039/GSM9485172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485173,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2599,36601,counts,um,1.0,verified,True,H&E,4.65565986147375,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485173,,,train,sda-all,samples/GSE318039/GSM9485173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485174,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3604,36601,counts,um,1.0,verified,True,H&E,4.496968982513409,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485174,,,train,sda-all,samples/GSE318039/GSM9485174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485175,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2129,36601,counts,um,1.0,verified,True,H&E,4.559734645630225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485175,,,train,sda-all,samples/GSE318039/GSM9485175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485176,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1872,36601,counts,um,1.0,verified,True,H&E,4.657920273838276,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485176,,,train,sda-all,samples/GSE318039/GSM9485176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485177,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1945,36601,counts,um,1.0,verified,True,H&E,4.654540507263224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485177,,,train,sda-all,samples/GSE318039/GSM9485177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485178,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1314,36601,counts,um,1.0,verified,True,H&E,4.471264751788277,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485178,,,train,sda-all,samples/GSE318039/GSM9485178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485179,GSE318039,GSE318039,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0005002,chronic obstructive pulmonary disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2867,36601,counts,um,1.0,verified,True,H&E,4.669789570079985,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485179,,,train,sda-all,samples/GSE318039/GSM9485179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9489187,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,Pregnant mice were intraperitoneally administered 200 µL of 0.1% BSA in PBS 48 hours prior to collection.,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,68239,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998455942904196,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489187,,,train,sda-all,samples/GSE318202/GSM9489187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9489188,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,Pregnant mice were intraperitoneally administered 200 µL of 0.1% BSA in PBS 48 hours prior to collection.,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,60038,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999982827311444,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489188,,,train,sda-all,samples/GSE318202/GSM9489188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.48, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9489189,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,Pregnant mice were intraperitoneally administered 200 µL of 0.1% BSA in PBS 48 hours prior to collection.,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,65647,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000325922876355,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489189,,,train,sda-all,samples/GSE318202/GSM9489189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9489190,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,CD1,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,88276,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489190,,,train,sda-all,samples/GSE318202/GSM9489190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.42, ""life_stage"": 0.86}",uberon,low_confidence_annotation
GSM9489191,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,CD1,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,90497,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500027960913586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489191,,,train,sda-all,samples/GSE318202/GSM9489191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9489192,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,CD1,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,83672,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489192,,,train,sda-all,samples/GSE318202/GSM9489192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.33, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9489193,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (embryonic coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,CD1,embryonic,luna,embryonic,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,81207,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.50000589066918,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489193,,,train,sda-all,samples/GSE318202/GSM9489193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM9489194,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (postnatal coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,C57BL/6,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,128498,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999793255536157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489194,,,train,sda-all,samples/GSE318202/GSM9489194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9489195,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (postnatal coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,C57BL/6,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,98395,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500012636706185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489195,,,train,sda-all,samples/GSE318202/GSM9489195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9489196,GSE318202,GSE318202,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002285,telencephalic ventricle,Brain (postnatal coronal brain sections containing the lateral ventricles),primary tissue,,,normal,luna,,C57BL/6,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,fixed frozen,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,115387,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000193718359335,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489196,,,train,sda-all,samples/GSE318202/GSM9489196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9490659,GSE318238,GSE318238,Spatially resolved gene expression and tumour-microenvironment interactions across malignant transformation in IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,astrocytoma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,1079,18085,counts,um,1.0,verified,True,H&E,2.1032071938454493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9490659,,,train,sda-all,samples/GSE318238/GSM9490659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9490660,GSE318238,GSE318238,Spatially resolved gene expression and tumour-microenvironment interactions across malignant transformation in IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,astrocytoma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,4451,18085,counts,um,1.0,verified,True,H&E,8.691450560917144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9490660,,,train,sda-all,samples/GSE318238/GSM9490660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9490661,GSE318238,GSE318238,Spatially resolved gene expression and tumour-microenvironment interactions across malignant transformation in IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,astrocytoma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,729,18085,counts,um,1.0,verified,True,H&E,2.989066375358949,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9490661,,,train,sda-all,samples/GSE318238/GSM9490661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9494074,GSE318415,GSE318415,Transcriptomic Landscape of Microglia in Mouse Models of Social Dysfunction and Oxytocin-Mediated Recovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus of brain,primary tissue,,,normal,luna,,healthy conrol,juvenile,luna,juvenile,,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75528,13459,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999914816978193,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9494074,,,test,sda-all,samples/GSE318415/GSM9494074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9494075,GSE318415,GSE318415,Transcriptomic Landscape of Microglia in Mouse Models of Social Dysfunction and Oxytocin-Mediated Recovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus of brain,primary tissue,,,perturbation,luna,,VPA-treated,juvenile,luna,juvenile,,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63216,13459,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999954820054732,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9494075,,,test,sda-all,samples/GSE318415/GSM9494075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9494076,GSE318415,GSE318415,Transcriptomic Landscape of Microglia in Mouse Models of Social Dysfunction and Oxytocin-Mediated Recovery,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus of brain,primary tissue,,,perturbation,luna,,VPA-treated,juvenile,luna,juvenile,,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37269,13459,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000036492798755,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9494076,,,test,sda-all,samples/GSE318415/GSM9494076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9496850,GSE318507,GSE318507,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: postnatal day,adult,P98,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,329439,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500011932035128,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496850,,,train,sda-all,samples/GSE318507/GSM9496850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9496851,GSE318507,GSE318507,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: postnatal day,adult,P98,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,317630,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999887845952102,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496851,,,train,sda-all,samples/GSE318507/GSM9496851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9496852,GSE318507,GSE318507,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0019056,neuromuscular disease,disease,mondo_predicate,,,adult,age rule: postnatal day,adult,P98,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,329560,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000079729557341,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496852,,,train,sda-all,samples/GSE318507/GSM9496852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9496853,GSE318507,GSE318507,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,not stated,luna,,,adult,age rule: postnatal day,adult,P98,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,147850,297,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000109346224677,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496853,,,train,sda-all,samples/GSE318507/GSM9496853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9497186,GSE318532,GSE318532,Targeting the lipid metabolism proteins FASN and GPAM in alveolar type II cells decreases lung metastasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,control,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1888,32285,counts,pixel,4.001929342701519,platform_constant,True,H&E,4.001929342701519,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41778850,,GSM9497186,,,train,hesrt,samples/GSE318532/GSM9497186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9497187,GSE318532,GSE318532,Targeting the lipid metabolism proteins FASN and GPAM in alveolar type II cells decreases lung metastasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,metastasis,MONDO:0005070,neoplasm,disease,luna,,lung metastasis,adult,age rule: age with unit,not stated,6–8 weeks,female,extracted field,female,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1110,32285,counts,pixel,3.9877920481219724,platform_constant,True,H&E,3.9877920481219724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41778850,,GSM9497187,,,train,hesrt,samples/GSE318532/GSM9497187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9497611,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4031,36601,counts,um,1.0,verified,True,H&E,5.123420547809209,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497611,,,train,sda-all,samples/GSE318562/GSM9497611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497612,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3018,36601,counts,um,1.0,verified,True,H&E,5.1192507545040975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497612,,,train,sda-all,samples/GSE318562/GSM9497612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497613,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2522,36601,counts,um,1.0,verified,True,H&E,5.226988768629871,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497613,,,train,sda-all,samples/GSE318562/GSM9497613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497614,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2138,36601,counts,um,1.0,verified,True,H&E,5.233846191348708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497614,,,train,sda-all,samples/GSE318562/GSM9497614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497615,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2531,36601,counts,um,1.0,verified,True,H&E,5.122052162284867,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497615,,,train,sda-all,samples/GSE318562/GSM9497615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497616,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1944,36601,counts,um,1.0,verified,True,H&E,5.120783240854034,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497616,,,train,sda-all,samples/GSE318562/GSM9497616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497617,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1639,36601,counts,um,1.0,verified,True,H&E,4.490323146105986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497617,,,train,sda-all,samples/GSE318562/GSM9497617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497618,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1202,36601,counts,um,1.0,verified,True,H&E,4.487135095373426,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497618,,,train,sda-all,samples/GSE318562/GSM9497618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9497619,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1346,36601,counts,um,1.0,verified,True,H&E,4.459993560210665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497619,,,train,sda-all,samples/GSE318562/GSM9497619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497620,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1420,36601,counts,um,1.0,verified,True,H&E,5.146759727719594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497620,,,train,sda-all,samples/GSE318562/GSM9497620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497621,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,689,36601,counts,um,1.0,verified,True,H&E,5.196532210411193,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497621,,,train,sda-all,samples/GSE318562/GSM9497621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497622,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,821,36601,counts,um,1.0,verified,True,H&E,5.207123878056208,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497622,,,train,sda-all,samples/GSE318562/GSM9497622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497623,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2461,36601,counts,um,1.0,verified,True,H&E,5.263252838668825,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497623,,,train,sda-all,samples/GSE318562/GSM9497623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497624,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1787,17943,counts,um,1.0,verified,True,H&E,4.257705519621639,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497624,,,train,sda-all,samples/GSE318562/GSM9497624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497625,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2850,17943,counts,um,1.0,verified,True,H&E,4.259097350149497,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497625,,,train,sda-all,samples/GSE318562/GSM9497625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9497626,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2915,17943,counts,um,1.0,verified,True,H&E,4.491451110707379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497626,,,train,sda-all,samples/GSE318562/GSM9497626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497627,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3194,17943,counts,um,1.0,verified,True,H&E,4.262921542308013,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497627,,,train,sda-all,samples/GSE318562/GSM9497627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497628,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3995,17943,counts,um,1.0,verified,True,H&E,4.525349270022658,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497628,,,train,sda-all,samples/GSE318562/GSM9497628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497629,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1919,17943,counts,um,1.0,verified,True,H&E,4.26108505695897,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497629,,,train,sda-all,samples/GSE318562/GSM9497629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497630,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2045,17943,counts,um,1.0,verified,True,H&E,4.521182516506064,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497630,,,train,sda-all,samples/GSE318562/GSM9497630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497631,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4634,17943,counts,um,1.0,verified,True,H&E,4.462097290340158,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497631,,,train,sda-all,samples/GSE318562/GSM9497631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9497632,GSE318562,GSE318562,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor section (IDH wildtype Glioblastoma),tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3147,17943,counts,um,1.0,verified,True,H&E,4.373992464388876,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497632,,,train,sda-all,samples/GSE318562/GSM9497632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9498003,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,6-8 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,20349,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498003,,,train,sda-all,samples/GSE318590/GSM9498003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9498004,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,6-8 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16301,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498004,,,train,sda-all,samples/GSE318590/GSM9498004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9498005,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,3-4 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,21032,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498005,,,train,sda-all,samples/GSE318590/GSM9498005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9498006,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,3-4 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,22924,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498006,,,train,sda-all,samples/GSE318590/GSM9498006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9498007,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,App NL-G-F,adult,age rule: age with unit,adult,3-4 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,28014,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498007,,,train,sda-all,samples/GSE318590/GSM9498007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9498008,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,App NL-G-F,adult,age rule: age with unit,adult,3-4 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,20496,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498008,,,train,sda-all,samples/GSE318590/GSM9498008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9498009,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,App NL-G-F,adult,age rule: age with unit,adult,6-8 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,22422,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498009,,,train,sda-all,samples/GSE318590/GSM9498009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9498010,GSE318590,GSE318590,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,App NL-G-F,adult,age rule: age with unit,adult,6-8 months,unknown,not stated,,,,fresh frozen,Fresh frozen,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,28386,960,counts,pixel,,unresolved,True,fluorescence: CosMx multichannel composite,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498010,,,train,sda-all,samples/GSE318590/GSM9498010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9501433,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1788,19465,counts,pixel,4.008374127802106,platform_constant,True,H&E,4.008374127802106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501433,,,train,hesrt,samples/GSE318726/GSM9501433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9501434,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3442,19465,counts,pixel,4.119999942320003,platform_constant,True,H&E,4.119999942320003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501434,,,train,hesrt,samples/GSE318726/GSM9501434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9501435,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2250,19465,counts,pixel,4.114355683490721,platform_constant,True,H&E,4.114355683490721,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501435,,,train,hesrt,samples/GSE318726/GSM9501435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9501436,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2195,19465,counts,pixel,4.112000025000957,platform_constant,True,H&E,4.112000025000957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501436,,,train,hesrt,samples/GSE318726/GSM9501436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9501437,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2698,19465,counts,pixel,4.07650514846102,platform_constant,True,H&E,4.07650514846102,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501437,,,train,hesrt,samples/GSE318726/GSM9501437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9501438,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3453,19465,counts,pixel,4.075999870790793,platform_constant,True,H&E,4.075999870790793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501438,,,train,hesrt,samples/GSE318726/GSM9501438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9501439,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,609,19465,counts,pixel,4.053846168440004,platform_constant,True,H&E,4.053846168440004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501439,,,train,hesrt,samples/GSE318726/GSM9501439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9501440,GSE318726,GSE318726,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver cancer,tumour tissue,MONDO:0007027;MONDO:0007256,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3364,19465,counts,pixel,4.15600003283239,platform_constant,True,H&E,4.15600003283239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501440,,,train,hesrt,samples/GSE318726/GSM9501440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9503424,GSE318797,GSE318797,CosMX spatial transcriptomics of mouse subcutaneous EO771 tumors to study synergistic effects of NEDD8 depletion and anti-PD-1 therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,Tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,anti-PD1/IgG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMX,,,cell,299604,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42330494,,GSM9503424,,,train,sda-all,samples/GSE318797/GSM9503424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9503425,GSE318797,GSE318797,CosMX spatial transcriptomics of mouse subcutaneous EO771 tumors to study synergistic effects of NEDD8 depletion and anti-PD-1 therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,,,Tumor,xenograft,MONDO:0005070,neoplasm,disease,luna,,anti-PD1/IgG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMX,,,cell,219990,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42330494,,GSM9503425,,,train,sda-all,samples/GSE318797/GSM9503425,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9505080,GSE318867,GSE318867,Vascular STING activation facilitates NK cell anti-tumor immunity in small cell lung cancer [Spatial_Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,SCLC,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2444,17943,counts,pixel,4.200112949097269,platform_constant,True,H&E,4.200112949097269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41791380,,GSM9505080,,,train,hesrt,samples/GSE318867/GSM9505080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9505081,GSE318663+GSE318867,GSE318867,Vascular STING activation facilitates NK cell anti-tumor immunity in small cell lung cancer [Spatial_Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,SCLC,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2589,17943,counts,pixel,4.184007132403596,platform_constant,True,H&E,4.184007132403596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41791380,,GSM9505081,,,train,hesrt,samples/GSE318867/GSM9505081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9505082,GSE318867,GSE318867,Vascular STING activation facilitates NK cell anti-tumor immunity in small cell lung cancer [Spatial_Transcriptome],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,SCLC,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,small cell lung cancer,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2444,17943,counts,pixel,4.184007132403596,platform_constant,True,H&E,4.184007132403596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41791380,,GSM9505082,,,train,hesrt,samples/GSE318867/GSM9505082,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9511110,GSE319123,GSE319123,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,lung,luna,UBERON:0002048,lung,Mouse lung,primary tissue,,,perturbation,luna,,NSG,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,352913,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999951321618069,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9511110,,,train,sda-all,samples/GSE319123/GSM9511110,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9514099,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,uberon_chain,UBERON:0001296,myometrium,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2203,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514099,,,test,sda-all,samples/GSE319236/GSM9514099,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.93, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9514100,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2728,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514100,,,test,sda-all,samples/GSE319236/GSM9514100,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.44, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514101,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3355,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514101,,,test,sda-all,samples/GSE319236/GSM9514101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.65}",disease_status,low_confidence_annotation
GSM9514102,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2133,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514102,,,test,sda-all,samples/GSE319236/GSM9514102,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.1, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514103,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1562,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514103,,,test,sda-all,samples/GSE319236/GSM9514103,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9514104,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3131,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514104,,,test,sda-all,samples/GSE319236/GSM9514104,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9514105,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2876,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514105,,,test,sda-all,samples/GSE319236/GSM9514105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.96, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514106,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3293,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514106,,,test,sda-all,samples/GSE319236/GSM9514106,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.18, ""life_stage"": 0.9500000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514107,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2859,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514107,,,test,sda-all,samples/GSE319236/GSM9514107,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514108,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2315,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514108,,,test,sda-all,samples/GSE319236/GSM9514108,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9514109,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3322,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514109,,,test,sda-all,samples/GSE319236/GSM9514109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9514110,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1775,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514110,,,test,sda-all,samples/GSE319236/GSM9514110,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.54, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM9514111,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2332,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514111,,,test,sda-all,samples/GSE319236/GSM9514111,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9514112,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2592,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514112,,,test,sda-all,samples/GSE319236/GSM9514112,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.49}",disease_status;life_stage,low_confidence_annotation
GSM9514113,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3985,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514113,,,test,sda-all,samples/GSE319236/GSM9514113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9514114,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3116,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514114,,,test,sda-all,samples/GSE319236/GSM9514114,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9514115,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2643,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514115,,,test,sda-all,samples/GSE319236/GSM9514115,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.62, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9514116,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1346,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514116,,,test,sda-all,samples/GSE319236/GSM9514116,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9514117,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3003,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514117,,,test,sda-all,samples/GSE319236/GSM9514117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM9514118,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2520,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514118,,,test,sda-all,samples/GSE319236/GSM9514118,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9514119,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:LJ,LJ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2074,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514119,,,test,sda-all,samples/GSE319236/GSM9514119,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.36, ""life_stage"": 0.9500000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514120,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:LJ,LJ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2027,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514120,,,test,sda-all,samples/GSE319236/GSM9514120,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514121,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FLJ,FLJ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3094,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514121,,,test,sda-all,samples/GSE319236/GSM9514121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.72}",disease_status,low_confidence_annotation
GSM9514122,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FLJ,FLJ,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3302,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514122,,,test,sda-all,samples/GSE319236/GSM9514122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9514123,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FND,FND,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1866,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514123,,,test,sda-all,samples/GSE319236/GSM9514123,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 0.12, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM9514124,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FND,FND,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1269,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514124,,,test,sda-all,samples/GSE319236/GSM9514124,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9514125,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:ND,ND,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3044,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514125,,,test,sda-all,samples/GSE319236/GSM9514125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.98, ""life_stage"": 0.8}",disease_status,low_confidence_annotation
GSM9514126,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3542,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514126,,,test,sda-all,samples/GSE319236/GSM9514126,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.32, ""life_stage"": 0.91}",disease_status;uberon,low_confidence_annotation
GSM9514127,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2080,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514127,,,test,sda-all,samples/GSE319236/GSM9514127,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514128,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1979,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514128,,,test,sda-all,samples/GSE319236/GSM9514128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9514129,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1988,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514129,,,test,sda-all,samples/GSE319236/GSM9514129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9514130,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVB,FVB,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2190,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514130,,,test,sda-all,samples/GSE319236/GSM9514130,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.4, ""life_stage"": 0.9400000000000001}",organ;disease_status;uberon,low_confidence_annotation
GSM9514131,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0005081,preeclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVB,FVB,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2529,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514131,,,test,sda-all,samples/GSE319236/GSM9514131,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9514132,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVB,FVB,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2903,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514132,,,test,sda-all,samples/GSE319236/GSM9514132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM9514133,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FGS,FGS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3204,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514133,,,test,sda-all,samples/GSE319236/GSM9514133,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 0.58, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514134,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FGS,FGS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1690,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514134,,,test,sda-all,samples/GSE319236/GSM9514134,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514135,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FGS,FGS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2555,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514135,,,test,sda-all,samples/GSE319236/GSM9514135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9514136,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FFM,FFM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2249,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514136,,,test,sda-all,samples/GSE319236/GSM9514136,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.2, ""life_stage"": 0.97}",disease_status;uberon,low_confidence_annotation
GSM9514137,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FFM,FFM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2614,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514137,,,test,sda-all,samples/GSE319236/GSM9514137,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9514138,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FFM,FFM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2688,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514138,,,test,sda-all,samples/GSE319236/GSM9514138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9514139,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVT,FVT,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3136,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514139,,,test,sda-all,samples/GSE319236/GSM9514139,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.04, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM9514140,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVT,FVT,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2234,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514140,,,test,sda-all,samples/GSE319236/GSM9514140,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514141,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FVT,FVT,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3187,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514141,,,test,sda-all,samples/GSE319236/GSM9514141,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514142,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FEP,FEP,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2729,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514142,,,test,sda-all,samples/GSE319236/GSM9514142,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 0.42, ""life_stage"": 0.93}",disease_status;uberon,low_confidence_annotation
GSM9514143,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FEP,FEP,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1893,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514143,,,test,sda-all,samples/GSE319236/GSM9514143,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514144,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FEP,FEP,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2511,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514144,,,test,sda-all,samples/GSE319236/GSM9514144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9514145,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FAM,FAM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2820,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514145,,,test,sda-all,samples/GSE319236/GSM9514145,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.04, ""life_stage"": 0.91}",disease_status;uberon,low_confidence_annotation
GSM9514146,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FAM,FAM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2476,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514146,,,test,sda-all,samples/GSE319236/GSM9514146,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.98, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514147,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FAM,FAM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3214,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514147,,,test,sda-all,samples/GSE319236/GSM9514147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9514148,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FJD,FJD,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2550,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514148,,,test,sda-all,samples/GSE319236/GSM9514148,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.58, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM9514149,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FJD,FJD,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1656,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514149,,,test,sda-all,samples/GSE319236/GSM9514149,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514150,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FJD,FJD,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3664,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514150,,,test,sda-all,samples/GSE319236/GSM9514150,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9514151,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FYI,FYI,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2029,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514151,,,test,sda-all,samples/GSE319236/GSM9514151,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.36, ""life_stage"": 0.89}",disease_status;uberon,low_confidence_annotation
GSM9514152,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FYI,FYI,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2774,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514152,,,test,sda-all,samples/GSE319236/GSM9514152,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514153,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FYI,FYI,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3392,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514153,,,test,sda-all,samples/GSE319236/GSM9514153,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 0.6000000000000001}",disease_status,low_confidence_annotation
GSM9514154,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,,,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FNS,FNS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2217,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514154,,,test,sda-all,samples/GSE319236/GSM9514154,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.4, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514155,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FNS,FNS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1278,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514155,,,test,sda-all,samples/GSE319236/GSM9514155,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9514156,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Control,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FNS,FNS,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3015,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514156,,,test,sda-all,samples/GSE319236/GSM9514156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9514157,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FSH,FSH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2496,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514157,,,test,sda-all,samples/GSE319236/GSM9514157,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.22, ""life_stage"": 0.8}",disease_status;uberon,low_confidence_annotation
GSM9514158,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FSH,FSH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1931,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514158,,,test,sda-all,samples/GSE319236/GSM9514158,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514159,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FSH,FSH,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2659,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514159,,,test,sda-all,samples/GSE319236/GSM9514159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9514160,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Chorioamniotic membranes,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FMM,FMM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2097,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514160,,,test,sda-all,samples/GSE319236/GSM9514160,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.62, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9514161,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001296,myometrium,Myometrium,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,mondo_predicate,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FMM,FMM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1573,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514161,,,test,sda-all,samples/GSE319236/GSM9514161,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514162,GSE319236,GSE319236,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,MONDO:0001641,severe pre-eclampsia,disease,luna,Preeclamptic,,not stated,luna,not stated,,unknown,not stated,,GSE319236:FMM,FMM,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3461,36601,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9514162,,,test,sda-all,samples/GSE319236/GSM9514162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.8}",disease_status,low_confidence_annotation
GSM9514750,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Mouse lung,cell culture,,,perturbation,luna,,NSG,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,44470,unknown,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514750,,,train,sda-all,samples/GSE319277/GSM9514750,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.44, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9514751,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Mouse lung,cell culture,,,perturbation,luna,,NSG,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2485,45656,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9514751,,,train,sda-all,samples/GSE319277/GSM9514751,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.18, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9514752,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,lung,luna,UBERON:0002048,lung,Mouse lung,cell culture,,,perturbation,luna,,NSG,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,89694,unknown,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514752,,,train,sda-all,samples/GSE319277/GSM9514752,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.39, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,feature_species_differs;low_confidence_annotation
GSM9514753,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Mouse liver,primary tissue,,,perturbation,luna,,Ros-K46a26-LSL-Cas9-2A-EGFP,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,22666,unknown,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514753,,,train,sda-all,samples/GSE319277/GSM9514753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9514754,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Mouse liver,primary tissue,,,perturbation,luna,,Rosa26-LSL-Cas9-2A-EGFP,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2431,39741,unknown,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514754,,,train,sda-all,samples/GSE319277/GSM9514754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9514757,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Mouse lung,cell culture,,,disease,luna,,C57BL-6J,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2500,19975,unknown,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514757,,,train,sda-all,samples/GSE319277/GSM9514757,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.64, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514758,GSE319277,GSE319277,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,lung,luna,UBERON:0002048,lung,Mouse lung,cell culture,,,perturbation,luna,,NSG,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,2490,46872,unknown,unstated,,unresolved,False,,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514758,,,train,sda-all,samples/GSE319277/GSM9514758,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.53, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,feature_species_differs;low_confidence_annotation
GSM9519394,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8487,18085,counts,um,1.0,verified,True,H&E,6.973807809244113,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519394,,,train,sda-all,samples/GSE319536/GSM9519394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9519395,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2087,18085,counts,um,1.0,verified,True,H&E,3.9804452126787697,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519395,,,train,sda-all,samples/GSE319536/GSM9519395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519396,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2865,18085,counts,um,1.0,verified,True,H&E,4.407033869765732,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519396,,,train,sda-all,samples/GSE319536/GSM9519396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9519397,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4359,18085,counts,um,1.0,verified,True,H&E,6.802186897914921,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519397,,,train,sda-all,samples/GSE319536/GSM9519397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519398,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1848,18085,counts,um,1.0,verified,True,H&E,4.008906755823962,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519398,,,train,sda-all,samples/GSE319536/GSM9519398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9519399,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3843,18085,counts,um,1.0,verified,True,H&E,4.634982579751843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519399,,,train,sda-all,samples/GSE319536/GSM9519399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9519400,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8953,18085,counts,um,1.0,verified,True,H&E,6.934196951831057,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519400,,,train,sda-all,samples/GSE319536/GSM9519400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9519401,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3512,18085,counts,um,1.0,verified,True,H&E,4.397420105579273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519401,,,train,sda-all,samples/GSE319536/GSM9519401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519402,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,277,18085,counts,um,1.0,verified,True,H&E,5.433050145009339,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519402,,,train,sda-all,samples/GSE319536/GSM9519402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519403,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2579,18085,counts,um,1.0,verified,True,H&E,3.9807176123782537,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519403,,,train,sda-all,samples/GSE319536/GSM9519403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519404,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10487,18085,counts,um,1.0,verified,True,H&E,6.80140338611184,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519404,,,train,sda-all,samples/GSE319536/GSM9519404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519405,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2001,18085,counts,um,1.0,verified,True,H&E,4.020370672617724,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519405,,,train,sda-all,samples/GSE319536/GSM9519405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519406,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,14336,18085,counts,um,1.0,verified,True,H&E,6.68294140408361,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519406,,,train,sda-all,samples/GSE319536/GSM9519406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519407,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7660,18085,counts,um,1.0,verified,True,H&E,6.825483079933342,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519407,,,train,sda-all,samples/GSE319536/GSM9519407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519408,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3155,18085,counts,um,1.0,verified,True,H&E,4.461178973857805,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519408,,,train,sda-all,samples/GSE319536/GSM9519408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9519409,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5362,18085,counts,um,1.0,verified,True,H&E,6.816316521053373,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519409,,,train,sda-all,samples/GSE319536/GSM9519409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9519410,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4612,18085,counts,um,1.0,verified,True,H&E,7.106306448981485,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519410,,,train,sda-all,samples/GSE319536/GSM9519410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519411,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2981,18085,counts,um,1.0,verified,True,H&E,4.130110135700227,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519411,,,train,sda-all,samples/GSE319536/GSM9519411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9519412,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2633,18085,counts,um,1.0,verified,True,H&E,4.194180997904183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519412,,,train,sda-all,samples/GSE319536/GSM9519412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519413,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3485,18085,counts,um,1.0,verified,True,H&E,4.411968238253659,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519413,,,train,sda-all,samples/GSE319536/GSM9519413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519414,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3102,18085,counts,um,1.0,verified,True,H&E,4.139953822741327,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519414,,,train,sda-all,samples/GSE319536/GSM9519414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519415,GSE319536,GSE319536,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,tumour tissue,MONDO:0004986,urinary bladder carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4387,18085,counts,um,1.0,verified,True,H&E,4.29512256148646,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519415,,,train,sda-all,samples/GSE319536/GSM9519415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9521682,GSE319617,GSE319617,Inference of cell-cell communication in human fetal liver from high definition spatial profiling using Renoir,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Fetal Liver,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,500570,18132,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42086556,,GSM9521682,,,train,hesrt,samples/GSE319617/GSM9521682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9521683,GSE319617,GSE319617,Inference of cell-cell communication in human fetal liver from high definition spatial profiling using Renoir,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Fetal Liver,primary tissue,,,normal,luna,,,fetal,luna,fetal,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,10x Genomics Visium HD,,,bin,333667,18132,counts,pixel,,unresolved,True,H&E,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42086556,,GSM9521683,,,train,hesrt,samples/GSE319617/GSM9521683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9524129,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,138401,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000089694761826,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524129,,,train,sda-all,samples/GSE319706/GSM9524129,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9524130,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,89487,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998595007098906,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524130,,,train,sda-all,samples/GSE319706/GSM9524130,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9524131,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,134421,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000014785025726,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524131,,,train,sda-all,samples/GSE319706/GSM9524131,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9524132,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,93717,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051741470048,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524132,,,train,sda-all,samples/GSE319706/GSM9524132,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9524133,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,119929,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000044386577499,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524133,,,train,sda-all,samples/GSE319706/GSM9524133,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9524134,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,101770,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999187063970674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524134,,,train,sda-all,samples/GSE319706/GSM9524134,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9524135,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,110534,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999944310081466,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524135,,,train,sda-all,samples/GSE319706/GSM9524135,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9524136,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0002097,skin of body,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,134966,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999972401611746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524136,,,train,sda-all,samples/GSE319706/GSM9524136,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9524137,GSE319706,GSE319706,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,other,luna,,,YUMMER1.7 mouse melanoma tissue (C57BL/6J),tumour tissue,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,112553,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999704316972204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524137,,,train,sda-all,samples/GSE319706/GSM9524137,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9525785,GSE319755,GSE319755,Cytotoxic CD39+ tumor-associated NK cells respond to NKG2A blockade in lung cancer (10x Xenium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung adenocarcinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,NSCLC,,aged,age rule: bare number read as years,aged,69,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,142747,568,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000192702980473,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42247486,,GSM9525785,,,train,sda-all,samples/GSE319755/GSM9525785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9525786,GSE319755,GSE319755,Cytotoxic CD39+ tumor-associated NK cells respond to NKG2A blockade in lung cancer (10x Xenium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,adjacent lung tissue,primary tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,NSCLC,,aged,age rule: bare number read as years,aged,69,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14187,568,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000043988269794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42247486,,GSM9525786,,,train,sda-all,samples/GSE319755/GSM9525786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9525787,GSE319755,GSE319755,Cytotoxic CD39+ tumor-associated NK cells respond to NKG2A blockade in lung cancer (10x Xenium),Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,margin at lung adenocacinoma,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,NSCLC,,aged,age rule: bare number read as years,aged,69,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,137993,568,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997818499127394,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42247486,,GSM9525787,,,train,sda-all,samples/GSE319755/GSM9525787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9525962,GSE319763,GSE319763,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human 5K Pan Tissue & Pathways Panel,xenium-4.0.1.0,cell,244374,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961795397983,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9525962,,,train,sda-all,samples/GSE319763/GSM9525962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9525963,GSE319763,GSE319763,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874;MONDO:0005275,acute myeloid leukemia;lung disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human 5K Pan Tissue & Pathways Panel,xenium-4.0.1.0,cell,736414,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092798812176,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9525963,,,train,sda-all,samples/GSE319763/GSM9525963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9525964,GSE319763,GSE319763,Inflammatory immune modulators of AML lung infiltration and respiratory failure,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0018874;MONDO:0005275,acute myeloid leukemia;lung disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,Xenium Human 5K Pan Tissue & Pathways Panel,xenium-4.0.1.0,cell,43810,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000132774696093,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9525964,,,train,sda-all,samples/GSE319763/GSM9525964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9526110,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,16793,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206334468172,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526110,,,train,sda-all,samples/GSE319771/GSM9526110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526111,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,43038,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999756465832157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526111,,,train,sda-all,samples/GSE319771/GSM9526111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9526112,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,30913,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999941141848146,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526112,,,train,sda-all,samples/GSE319771/GSM9526112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526113,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,62383,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000137677833868,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526113,,,train,sda-all,samples/GSE319771/GSM9526113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526114,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,31891,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011474205984,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526114,,,train,sda-all,samples/GSE319771/GSM9526114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526115,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,117332,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000115027146407,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526115,,,train,sda-all,samples/GSE319771/GSM9526115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526116,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,65595,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103173147469,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42206386,,GSM9526116,,,train,sda-all,samples/GSE319771/GSM9526116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526117,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,19419,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999806720956602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526117,,,train,sda-all,samples/GSE319771/GSM9526117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526118,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,10976,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999811437191443,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526118,,,train,sda-all,samples/GSE319771/GSM9526118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526119,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,28499,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999908290535583,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526119,,,train,sda-all,samples/GSE319771/GSM9526119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526120,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,25920,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896855230586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526120,,,train,sda-all,samples/GSE319771/GSM9526120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526121,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,95497,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999828107810781,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526121,,,train,sda-all,samples/GSE319771/GSM9526121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526122,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,35573,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206076307112,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42206386,,GSM9526122,,,train,sda-all,samples/GSE319771/GSM9526122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526123,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,26610,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862372694742,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526123,,,train,sda-all,samples/GSE319771/GSM9526123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526124,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,162196,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999961880282303,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526124,,,train,sda-all,samples/GSE319771/GSM9526124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526125,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,155293,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054763179672,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526125,,,train,sda-all,samples/GSE319771/GSM9526125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526126,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,42949,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000217730106344,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42206386,,GSM9526126,,,train,sda-all,samples/GSE319771/GSM9526126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526127,GSE319771,GSE319771,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0001707,cardiac sarcoidosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,104611,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999597959933834,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526127,,,train,sda-all,samples/GSE319771/GSM9526127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9527706,GSE319842,GSE319842,Spatial transcriptomic profiling of TOP2B-driven anthracycline-induced cardiotoxicity in mouse hearts,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Cardiac Tissue,primary tissue,,,perturbation,luna,,alpha_MHC_MerCreMer_het,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1256,19465,counts,um,1.0,verified,True,H&E,6.9724334084341795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42102394,,GSM9527706,,,train,sda-all,samples/GSE319842/GSM9527706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9527707,GSE319842,GSE319842,Spatial transcriptomic profiling of TOP2B-driven anthracycline-induced cardiotoxicity in mouse hearts,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Cardiac Tissue,primary tissue,,,perturbation,luna,,alpha_MHC_MerCreMer_Het_TOP2B_LSL,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,924,19465,counts,um,1.0,verified,True,H&E,7.025396881618484,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42102394,,GSM9527707,,,train,sda-all,samples/GSE319842/GSM9527707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9530208,GSE319949,GSE319949,Logistic regression for estimating functional effects with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,12 days,male,extracted field,Male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,315533,819,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42137981,,GSM9530208,,,train,sda-all,samples/GSE319949/GSM9530208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9530209,GSE319949,GSE319949,Logistic regression for estimating functional effects with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,18 days,male,extracted field,Male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,292193,819,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,42137981,,GSM9530209,,,train,sda-all,samples/GSE319949/GSM9530209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9530210,GSE319949,GSE319949,Logistic regression for estimating functional effects with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,12 days,male,extracted field,Male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,276810,819,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42137981,,GSM9530210,,,train,sda-all,samples/GSE319949/GSM9530210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9530211,GSE319949,GSE319949,Logistic regression for estimating functional effects with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,neonatal or infant,luna,neonatal or infant,18 days,male,extracted field,Male,,,fresh frozen,Fresh frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,312003,819,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42137981,,GSM9530211,,,train,sda-all,samples/GSE319949/GSM9530211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9532655,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,18085,counts,um,1.0,verified,True,H&E,7.017561143367967,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532655,,,train,sda-all,samples/GSE320041/GSM9532655,sda-tissue-disease-2.3,"{""organ"": 0.42, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.12, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9532656,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4708,18085,counts,um,1.0,verified,True,H&E,7.0330114393632615,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532656,,,train,sda-all,samples/GSE320041/GSM9532656,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532657,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4920,18085,counts,um,1.0,verified,True,H&E,6.965806711591505,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532657,,,train,sda-all,samples/GSE320041/GSM9532657,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532658,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4919,18085,counts,um,1.0,verified,True,H&E,5.211432322772551,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532658,,,train,sda-all,samples/GSE320041/GSM9532658,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532659,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,52861,18085,counts,um,1.0,verified,True,H&E,4.621923651277648,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532659,,,train,sda-all,samples/GSE320041/GSM9532659,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532660,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4990,18085,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),6.993223563957389,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532660,,,train,sda-all,samples/GSE320041/GSM9532660,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532661,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,175561,18085,counts,um,1.0,verified,True,H&E,4.634204283641579,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532661,,,train,sda-all,samples/GSE320041/GSM9532661,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532662,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4910,18085,counts,um,1.0,verified,True,H&E,7.037904465117135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532662,,,train,sda-all,samples/GSE320041/GSM9532662,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532663,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3819,18085,counts,um,1.0,verified,True,"fluorescence: single channel, grayscale (heuristic)",7.003127609375573,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532663,,,train,sda-all,samples/GSE320041/GSM9532663,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532664,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4886,18085,counts,um,1.0,verified,True,H&E,6.9389093856734485,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532664,,,train,sda-all,samples/GSE320041/GSM9532664,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532665,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0002097,skin of body,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3932,18085,counts,um,1.0,verified,True,H&E,7.022638860759608,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532665,,,train,sda-all,samples/GSE320041/GSM9532665,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9532666,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4932,18085,counts,um,1.0,verified,True,H&E,6.804313805901123,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532666,,,train,sda-all,samples/GSE320041/GSM9532666,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532667,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,746,18085,counts,um,1.0,verified,True,H&E,2.2480873882879986,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532667,,,train,sda-all,samples/GSE320041/GSM9532667,sda-tissue-disease-2.3,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532668,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2558,18085,counts,um,1.0,verified,True,H&E,4.871596612834962,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532668,,,train,sda-all,samples/GSE320041/GSM9532668,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532669,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,476,18085,counts,um,1.0,verified,True,H&E,2.232613110398397,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532669,,,train,sda-all,samples/GSE320041/GSM9532669,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532670,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2597,18085,counts,um,1.0,verified,True,H&E,4.728733785426858,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532670,,,train,sda-all,samples/GSE320041/GSM9532670,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532671,GSE320041+GSE320042,GSE320041,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Metastatic melanoma,metastasis,MONDO:0005191,metastatic melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2785,18085,counts,um,1.0,verified,True,H&E,3.387958605401426,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532671,,,train,sda-all,samples/GSE320041/GSM9532671,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9535604,GSE320142,GSE320142,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Primary lung cancer,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,273523,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499986740526843,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535604,,,train,sda-all,samples/GSE320142/GSM9535604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9535605,GSE320142,GSE320142,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Primary lung cancer,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,545933,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000007924935016,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535605,,,train,sda-all,samples/GSE320142/GSM9535605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9535606,GSE320142,GSE320142,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Primary ovarian cancer,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,355346,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999925295084416,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535606,,,train,sda-all,samples/GSE320142/GSM9535606,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9535607,GSE320142,GSE320142,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Primary ovarian cancer,tumour tissue,MONDO:0005140,ovarian carcinoma,disease,luna,,untreated,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,110570,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997810858143604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535607,,,train,sda-all,samples/GSE320142/GSM9535607,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9541930,GSE320372,GSE320372,Spatial transcriptomics analysis of dual-pathway spots,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,normal chow diet,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2006,32285,counts,um,1.0,verified,True,H&E,4.681877400909816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9541930,,,train,sda-all,samples/GSE320372/GSM9541930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9541931,GSE320372,GSE320372,Spatial transcriptomics analysis of dual-pathway spots,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,perturbation,luna,,3-month high-fat diet,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1715,32285,counts,um,1.0,verified,True,H&E,4.6877214927291595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9541931,,,train,sda-all,samples/GSE320372/GSM9541931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9541932,GSE320372,GSE320372,Spatial transcriptomics analysis of dual-pathway spots,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0007620,fish eye disease,disease,mondo_predicate (Luna: perturbation),,Humanized liver,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2972,18085,counts,um,1.0,verified,True,H&E,8.125851436620149,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9541932,,,train,sda-all,samples/GSE320372/GSM9541932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9829399,GSE320372,GSE320372,Spatial transcriptomics analysis of dual-pathway spots,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Normal Chow Diet Fast,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1446,32285,counts,um,1.0,verified,True,H&E,4.6825488819963335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9829399,,,train,sda-all,samples/GSE320372/GSM9829399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9829400,GSE320372,GSE320372,Spatial transcriptomics analysis of dual-pathway spots,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,perturbation,luna,,3-Month High-Fat Diet Fast,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2163,32285,counts,um,1.0,verified,True,H&E,4.68689629039716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9829400,,,train,sda-all,samples/GSE320372/GSM9829400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9542521,GSE320403,GSE320403,The role of retinoic acid receptor signaling in liver cells during Alcohol-associated liver disease resolution by spatial transcriptomics analysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,"western diet, alcohol and DMSO or RAR agonist",not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,155388,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999914957721838,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9542521,,,train,sda-all,samples/GSE320403/GSM9542521,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9543396,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine,primary tissue,,,normal,luna,,Control (NIAAA model),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2098,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.959217654720498,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543396,,,test,sda-all,samples/GSE320442/GSM9543396,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9543397,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Control (NIAAA model),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2214,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.784553577166233,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543397,,,test,sda-all,samples/GSE320442/GSM9543397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9543398,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine,primary tissue,MONDO:0002515,hepatobiliary disorder,disease,luna,,Ethanol feeding (NIAAA model),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2489,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.200698442152988,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543398,,,test,sda-all,samples/GSE320442/GSM9543398,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM9543399,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding (NIAAA model),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1989,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.580339424686576,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543399,,,test,sda-all,samples/GSE320442/GSM9543399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9543400,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding+FTY720 (NIAAA model),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2307,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.091991811473675,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543400,,,test,sda-all,samples/GSE320442/GSM9543400,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9543401,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding+FTY720 (NIAAA model),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1646,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.091712726185764,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543401,,,test,sda-all,samples/GSE320442/GSM9543401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9824766,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine,primary tissue,,,normal,luna,,Control (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2905,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.899885374849285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824766,,,test,sda-all,samples/GSE320442/GSM9824766,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824767,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0002515,hepatobiliary disorder,disease,mondo_predicate,,Control (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1744,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.00202487382655,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824767,,,test,sda-all,samples/GSE320442/GSM9824767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9824768,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,Control (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1762,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.889073489001442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824768,,,test,sda-all,samples/GSE320442/GSM9824768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9824769,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2161,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.88423289518897,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824769,,,test,sda-all,samples/GSE320442/GSM9824769,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.6900000000000001, ""life_stage"": 0.98}",,
GSM9824770,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2048,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.8892073515045285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824770,,,test,sda-all,samples/GSE320442/GSM9824770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9824771,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1751,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.004228992447162,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824771,,,test,sda-all,samples/GSE320442/GSM9824771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9824772,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0000160,intestine,Intestine,primary tissue,MONDO:0002515,hepatobiliary disorder,disease,mondo_predicate (Luna: perturbation),,Ethanol feeding+FTY720 (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2708,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.993302429455433,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824772,,,test,sda-all,samples/GSE320442/GSM9824772,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9824773,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding+FTY720 (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1813,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.893023742614116,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824773,,,test,sda-all,samples/GSE320442/GSM9824773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9824774,GSE320442,GSE320442,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0005154,liver disorder,disease,luna,,Ethanol feeding+FTY720 (NIAAA model),adult,age rule: age with unit,adult,8-10 weeks,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1669,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.001608066260551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824774,,,test,sda-all,samples/GSE320442/GSM9824774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9544115,GSE320484,GSE320484,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0020804,basal cell carcinoma,disease,luna,,"GPP male mouse was induced with tamoxifen at 8 weeks of age, and skin biopsies were collected 5 weeks post-induction.",adult,luna,adult,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,120819,13435,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092729970327,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9544115,,,train,sda-all,samples/GSE320484/GSM9544115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.92, ""uberon"": 0.5700000000000001, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM9544116,GSE320484,GSE320484,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0020804,basal cell carcinoma,disease,luna,,"GPP female mouse was induced with tamoxifen at 8 weeks of age, and skin biopsies were collected 5 weeks post-induction.",adult,luna,adult,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,70706,13435,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000016358401674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9544116,,,train,sda-all,samples/GSE320484/GSM9544116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.93, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9712817,GSE320484,GSE320484,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0020804,basal cell carcinoma,disease,luna,,"GPP male mouse was induced with tamoxifen at 8 weeks of age. Five weeks post-induction, mice were treated with IMQ for 5 consecutive days, followed by skin biopsy collection.",adult,luna,adult,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,109179,13435,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000073110103816,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9712817,,,train,sda-all,samples/GSE320484/GSM9712817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.93, ""uberon"": 0.48, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM9712818,GSE320484,GSE320484,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0004993,carcinoma,disease,luna,,"GPP female mouse was induced with tamoxifen at 8 weeks of age. Five weeks post-induction, mice were treated with IMQ for 5 consecutive days, followed by skin biopsy collection.",adult,luna,adult,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,103216,13435,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9712818,,,train,sda-all,samples/GSE320484/GSM9712818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.72, ""uberon"": 0.59, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9544605,GSE320505,GSE320505,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain metastasis,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3623,18085,counts,pixel,4.262754101824801,platform_constant,True,H&E,4.262754101824801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544605,,,test,hesrt,samples/GSE320505/GSM9544605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9544606,GSE320505,GSE320505,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain metastasis,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,809,18085,counts,pixel,4.2590448484169405,platform_constant,True,H&E,4.2590448484169405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544606,,,test,hesrt,samples/GSE320505/GSM9544606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9544607,GSE320505,GSE320505,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain metastasis,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1986,18085,counts,pixel,3.156752521821369,platform_constant,True,H&E,3.156752521821369,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544607,,,test,hesrt,samples/GSE320505/GSM9544607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9544608,GSE320505,GSE320505,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain metastasis,metastasis,MONDO:0004992,cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1244,18085,counts,pixel,2.6589954630020096,platform_constant,True,H&E,2.6589954630020096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544608,,,test,hesrt,samples/GSE320505/GSM9544608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9550333,GSE321832,GSE321832,Spatial transcriptomics of squamous cell carcinoma from different tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000974,neck,Head and neck SCC,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4822,17943,counts,pixel,3.941137261446226,platform_constant,True,H&E,3.941137261446226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550333,,,train,hesrt,samples/GSE321832/GSM9550333,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9550334,GSE321832,GSE321832,Spatial transcriptomics of squamous cell carcinoma from different tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0000167,oral cavity,Head and neck SCC,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4772,17943,counts,pixel,3.9548202836919932,platform_constant,True,H&E,3.9548202836919932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550334,,,train,hesrt,samples/GSE321832/GSM9550334,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9550335,GSE321832,GSE321832,Spatial transcriptomics of squamous cell carcinoma from different tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung SCC,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,3639,17943,counts,pixel,4.241973414479875,platform_constant,True,H&E,4.241973414479875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550335,,,train,hesrt,samples/GSE321832/GSM9550335,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9550336,GSE321832,GSE321832,Spatial transcriptomics of squamous cell carcinoma from different tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous SCC,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4454,17943,counts,pixel,3.9411372614462437,platform_constant,True,H&E,3.9411372614462437,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550336,,,train,hesrt,samples/GSE321832/GSM9550336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9550337,GSE321832,GSE321832,Spatial transcriptomics of squamous cell carcinoma from different tissues,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Cutaneous SCC,tumour tissue,MONDO:0005096,squamous cell carcinoma,disease,luna,squamous cell carcinoma,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,4197,17943,counts,pixel,3.954820283691993,platform_constant,True,H&E,3.954820283691993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550337,,,train,hesrt,samples/GSE321832/GSM9550337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9554204,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2340,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.0553617278224445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554204,,,train,sda-all,samples/GSE322553/GSM9554204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9554205,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2946,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.055087841822698,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554205,,,train,sda-all,samples/GSE322553/GSM9554205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9554206,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2599,17943,counts,um,1.0,verified,True,H&E-like (heuristic),3.9951305971689814,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554206,,,train,sda-all,samples/GSE322553/GSM9554206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9554207,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon,tumour tissue,MONDO:0024331,colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3579,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.4951335580794165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554207,,,train,sda-all,samples/GSE322553/GSM9554207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9554208,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2410,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.09934098262906,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554208,,,train,sda-all,samples/GSE322553/GSM9554208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9554209,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2894,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.582843221405757,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554209,,,train,sda-all,samples/GSE322553/GSM9554209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9554210,GSE322553,GSE322553,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4059,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.821470893274813,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554210,,,train,sda-all,samples/GSE322553/GSM9554210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9555995,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Pre-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 013,Patient 013,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,71030,18085,counts,um,1.0,verified,True,H&E,4.290532679596843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555995,,,train,sda-all,samples/GSE322640/GSM9555995,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9555996,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Post-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 013,Patient 013,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,41222,18085,counts,um,1.0,verified,True,H&E,5.270351529910533,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555996,,,train,sda-all,samples/GSE322640/GSM9555996,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9555997,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Pre-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 015,Patient 015,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,26164,18085,counts,um,1.0,verified,True,H&E,5.081076786406512,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555997,,,train,sda-all,samples/GSE322640/GSM9555997,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9555998,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Post-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 015,Patient 015,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,27722,18085,counts,um,1.0,verified,True,H&E,2.0077887847942075,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555998,,,train,sda-all,samples/GSE322640/GSM9555998,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9555999,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Pre-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 029,Patient 029,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,26680,18085,counts,um,1.0,verified,True,H&E,0.6984393995946648,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555999,,,train,sda-all,samples/GSE322640/GSM9555999,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9556000,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Post-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 029,Patient 029,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,94034,18085,counts,um,1.0,verified,True,H&E,1.8128428917950299,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556000,,,train,sda-all,samples/GSE322640/GSM9556000,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9556001,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Pre-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 032,Patient 032,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,46513,18085,counts,um,1.0,verified,True,H&E,2.712646016837286,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556001,,,train,sda-all,samples/GSE322640/GSM9556001,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9556002,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Post-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 032,Patient 032,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,126298,18085,counts,um,1.0,verified,True,H&E,1.434946199281248,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556002,,,train,sda-all,samples/GSE322640/GSM9556002,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9556003,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Pre-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 033,Patient 033,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,10355,18085,counts,um,1.0,verified,True,H&E,1.4368426842731106,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556003,,,train,sda-all,samples/GSE322640/GSM9556003,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9556004,GSE322640,GSE322640,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor needle biopsy,tumour tissue,MONDO:0012817,Ewing sarcoma,disease,luna,,Post-treatment,not stated,luna,not stated,,unknown,not stated,,GSE322640:Patient 033,Patient 033,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,13627,18085,counts,um,1.0,verified,True,H&E,2.4958132245300937,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556004,,,train,sda-all,samples/GSE322640/GSM9556004,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9560411,GSE322883,GSE322883,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0001754,dental pulp,Dental pulp,primary tissue,,,normal,luna,,Normal dental pulp tissue,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,759,18120,counts,um,1.0,verified,True,H&E,3.009729221589046,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560411,,,train,sda-all,samples/GSE322883/GSM9560411,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9560412,GSE322883,GSE322883,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0001754,dental pulp,Dental pulp,primary tissue,MONDO:0006937,pulpitis,disease,luna,,Reversible pulpitis tissue,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1496,18120,counts,um,1.0,verified,True,H&E,3.3582257442964054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560412,,,train,sda-all,samples/GSE322883/GSM9560412,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9560413,GSE322883,GSE322883,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0001754,dental pulp,Dental pulp,primary tissue,MONDO:0006937,pulpitis,disease,luna,,Irreversible pulpitis tissue sample 1,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1091,18120,counts,um,1.0,verified,True,H&E,2.8588677680232957,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560413,,,train,sda-all,samples/GSE322883/GSM9560413,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9560414,GSE322883,GSE322883,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,oral cavity,luna,UBERON:0001754,dental pulp,Dental pulp,primary tissue,MONDO:0006937,pulpitis,disease,luna,,Irreversible pulpitis tissue sample 2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1170,18120,counts,um,1.0,verified,True,H&E,2.7062391956799305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560414,,,train,sda-all,samples/GSE322883/GSM9560414,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9561833,GSE322974,GSE322974,Spatial Transcriptomic Analysis of a Human Bone Marrow Clot Biopsy Using Xenium 5K,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75396,9858,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999761146496813,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41889971;42605801,,GSM9561833,,,train,sda-all,samples/GSE322974/GSM9561833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9564255,GSE323357,GSE323357,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0001474,bone element,bone metastatic tissue,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2212,32285,counts,pixel,4.647819262471229,platform_constant,True,H&E,4.647819262471229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564255,,,test,hesrt,samples/GSE323357/GSM9564255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9564256,GSE323357,GSE323357,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0001474,bone element,bone metastatic tissue,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,1869,32285,counts,pixel,4.670542648920101,platform_constant,True,H&E,4.670542648920101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564256,,,test,hesrt,samples/GSE323357/GSM9564256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9564257,GSE323357,GSE323357,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0001474,bone element,bone metastatic tissue,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2022,32285,counts,pixel,4.349174590541732,platform_constant,True,H&E,4.349174590541732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564257,,,test,hesrt,samples/GSE323357/GSM9564257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9564258,GSE323357,GSE323357,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0001474,bone element,bone metastatic tissue,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2153,32285,counts,pixel,4.649442589377819,platform_constant,True,H&E,4.649442589377819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564258,,,test,hesrt,samples/GSE323357/GSM9564258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9567833,GSE324075,GSE324075,Integrated spatial transcriptomics (Stereo-seq) and bulk RNA-seq of cardiac sonogenetics in rodent heart tissue across time points [Stereo-seq],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,77951,40628,counts,native_grid,,unresolved,False,,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM9567833,,,val,sda-all,samples/GSE324075/GSM9567833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9568685,GSE324128,GSE324128,Molecularly distinct subtypes of Lhx6-positive neurons of the zona incerta differentially regulate sleep pressure and recovery sleep,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001898,hypothalamus,Hypothalamus,primary tissue,,,normal,luna,,"Mouse was housed in a climate-controlled pathogen-free facility and allowed food, water, and sleep ad libitum during lights on (6:30am-12:30pm). Euthanized after 6 hours (12:30pm).",not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,mBrain_100g,xenium-2.0.1.1,cell,228180,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103359735399,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9568685,,,train,sda-all,samples/GSE324128/GSM9568685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9570180,GSE324158,GSE324158,Single-cell multi-omic and spatial landscape of primate pineal gland reveals circadian and melatonin regulatory architecture,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,brain,luna,UBERON:0001905,pineal body,Pineal gland,primary tissue,,,normal,luna,,wild type,adult,luna,adult,4 to 5 years,female,extracted field,female,,,,,BMK S1000,release v3,BMKMANU S3000,sequencing-based,BMKMANU S3000,,,spot,3591,38503,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9570180,,,train,sda-all,samples/GSE324158/GSM9570180,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9572842,GSE324268,GSE324268,Xenium single cell spatial transcriptomics from patient-derived glioblastoma organoid cultured on brain slice and a primary glioblastoma sample,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,organoid,MONDO:0018177,glioblastoma,disease,luna,Glioblastoma,Patient-derived glioblastoma organoid culture,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55343,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999963480547304,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41951573,,GSM9572842,,,train,sda-all,samples/GSE324268/GSM9572842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9572843,GSE324268,GSE324268,Xenium single cell spatial transcriptomics from patient-derived glioblastoma organoid cultured on brain slice and a primary glioblastoma sample,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Bran,tumour tissue,MONDO:0018177,glioblastoma,disease,luna,Glioblastoma,Primary glioblastoma,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,851509,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999022673964033,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41951573,,GSM9572843,,,train,sda-all,samples/GSE324268/GSM9572843,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9575880,GSE324427,GSE324427,Myasthenia thymus reprograms class switched B cells into BAFF dependent survivors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,Thymus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"formalin-fixed, paraffin-embedded",Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,284484,18085,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,42585334,,GSM9575880,,,val,sda-all,samples/GSE324427/GSM9575880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9575881,GSE324427,GSE324427,Myasthenia thymus reprograms class switched B cells into BAFF dependent survivors,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thymus,luna,UBERON:0002370,thymus,Thymus,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"formalin-fixed, paraffin-embedded",Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,335590,18085,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,42585334,,GSM9575881,,,val,sda-all,samples/GSE324427/GSM9575881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9579206,GSE324535,GSE324535,CD36-mediated lipid-accumulation in reactive microglia drives retinal degeneration through NLRP3-IL-1β pathway,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0010230,eyeball of camera-type eye,eyeball,primary tissue,MONDO:0004580,retinal degeneration,disease,mondo_predicate (Luna: perturbation),,PBS/NaIO3,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,7675,24808,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9579206,,,train,sda-all,samples/GSE324535/GSM9579206,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9580061,GSE324601,GSE324601,Spatial transcriptomic analysis of human iPSC-derived hemanoids at day 16 and day 28,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,iPSC derived organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1024,19144,counts,um,1.0,verified,True,H&E-like (heuristic),4.653535751993694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9580061,,,train,sda-all,samples/GSE324601/GSM9580061,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9580062,GSE324601,GSE324601,Spatial transcriptomic analysis of human iPSC-derived hemanoids at day 16 and day 28,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,iPSC derived organoids,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1354,19144,counts,um,1.0,verified,True,H&E-like (heuristic),4.654771039127052,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9580062,,,train,sda-all,samples/GSE324601/GSM9580062,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9588621,GSE324903,GSE324903,Early lineage divergence segregates sensory-related and motor-associative identities in the thalamus [Spatial Transcriptomics E12],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Thalamus,primary tissue,,,normal,luna,,ICR/CD-1,embryonic,age rule: embryonic day,embryonic,Embryonic day 12.5,unknown,not stated,,,,,,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,740571,31622,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9588621,,,train,sda-all,samples/GSE324903/GSM9588621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9589058,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001737,larynx,larynx,tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,7727,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000124295657938,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589058,,,val,sda-all,samples/GSE324934/GSM9589058,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.78, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9589059,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001737,larynx,larynx,tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8377,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999352599958563,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589059,,,val,sda-all,samples/GSE324934/GSM9589059,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.71, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589060,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001737,larynx,larynx,tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6826,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999530992045615,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589060,,,val,sda-all,samples/GSE324934/GSM9589060,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9589061,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,airway,uberon_chain,UBERON:0001737,larynx,larynx,tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5389,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000202429149797,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589061,,,val,sda-all,samples/GSE324934/GSM9589061,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589062,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,oropharynx (p16 negative),tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,11845,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589062,,,val,sda-all,samples/GSE324934/GSM9589062,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589063,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,oropharynx (p16 negative),tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,5563,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000188951490999,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589063,,,val,sda-all,samples/GSE324934/GSM9589063,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589064,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,oropharynx (p16 negative),tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77331,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999821428571428,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589064,,,val,sda-all,samples/GSE324934/GSM9589064,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589065,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,oropharynx (p16 negative),tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,18837,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49993542686242526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589065,,,val,sda-all,samples/GSE324934/GSM9589065,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589066,GSE324934,GSE324934,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0001729,oropharynx,oropharynx (p16 negative),tumour tissue,MONDO:0010150;MONDO:0021310,head and neck squamous cell carcinoma;malignant tumor of neck,disease,luna,head and neck squamous cell carcinoma,Surgical resection,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,8552,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000020703362227,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589066,,,val,sda-all,samples/GSE324934/GSM9589066,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597725,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016525,frontal lobe,Frontal lobe,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,996,36601,counts,um,1.0,verified,True,H&E,4.164344073605525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597725,,,test,sda-all,samples/GSE325196/GSM9597725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597726,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001872,parietal lobe,Parietal lobe,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2671,18085,counts,um,1.0,verified,True,H&E,6.987627772452715,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597726,,,test,sda-all,samples/GSE325196/GSM9597726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597727,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002037,cerebellum,Cerebellum,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4569,18085,counts,um,1.0,verified,True,H&E,6.945723327863502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597727,,,test,sda-all,samples/GSE325196/GSM9597727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597728,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016525,frontal lobe,Frontal lobe,metastasis,MONDO:0005105,melanoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3876,18085,counts,um,1.0,verified,True,H&E,6.938791738048153,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597728,,,test,sda-all,samples/GSE325196/GSM9597728,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9597729,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016525,frontal lobe,Frontal lobe,metastasis,MONDO:0005089,sarcoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,330,36601,counts,um,1.0,verified,True,H&E,4.147365724109828,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597729,,,test,sda-all,samples/GSE325196/GSM9597729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9597730,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Parieto-occipital,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4607,17943,counts,um,1.0,verified,True,H&E,4.231653436540452,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597730,,,test,sda-all,samples/GSE325196/GSM9597730,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9597731,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002021,occipital lobe,Occipital lobe,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4436,18085,counts,um,1.0,verified,True,H&E,6.990080584606434,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597731,,,test,sda-all,samples/GSE325196/GSM9597731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597732,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016525,frontal lobe,Frontal lobe,metastasis,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1151,36601,counts,um,1.0,verified,True,H&E,4.188247970211388,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597732,,,test,sda-all,samples/GSE325196/GSM9597732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9597733,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016525,frontal lobe,Frontal lobe,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3735,17943,counts,um,1.0,verified,True,H&E,4.142164831171729,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597733,,,test,sda-all,samples/GSE325196/GSM9597733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9597734,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0016525,frontal lobe,Frontal lobe,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,911,36601,counts,um,1.0,verified,True,H&E,4.148256329646038,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597734,,,test,sda-all,samples/GSE325196/GSM9597734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597735,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1033,36601,counts,um,1.0,verified,True,H&E,4.301601385555917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597735,,,test,sda-all,samples/GSE325196/GSM9597735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9597736,GSE325196,GSE325196,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Parieto-occipital,metastasis,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2921,36601,counts,um,1.0,verified,True,H&E,4.562423792402263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597736,,,test,sda-all,samples/GSE325196/GSM9597736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9598481,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,control,vehicle,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,129203,7237,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000079083122445,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598481,,,train,sda-all,samples/GSE325253/GSM9598481,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9598482,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,control,vehicle,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,198127,9078,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999942563065747,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598482,,,train,sda-all,samples/GSE325253/GSM9598482,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9598483,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,bleomycin,vehicle,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,291340,12115,counts,um,1.0,verified,True,fluorescence: DAPI,0.499992892220212,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598483,,,train,sda-all,samples/GSE325253/GSM9598483,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9598484,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,bleomycin,vehicle,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,231097,12457,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000021781746896,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598484,,,train,sda-all,samples/GSE325253/GSM9598484,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9598485,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,bleomycin,AZD3965,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,189804,13471,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000076222832004,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598485,,,train,sda-all,samples/GSE325253/GSM9598485,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9598486,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,bleomycin,AZD3965,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,202740,13377,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999455646039276,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598486,,,train,sda-all,samples/GSE325253/GSM9598486,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9598487,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,bleomycin,VB124,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,155257,13221,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012167226359,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598487,,,train,sda-all,samples/GSE325253/GSM9598487,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9598488,GSE325253,GSE325253,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,bleomycin,VB124,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,195012,13534,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000057434295166,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598488,,,train,sda-all,samples/GSE325253/GSM9598488,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9601958,GSE325371,GSE325371,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,leaf,primary tissue,,,perturbation,luna,,Long term salt stress,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMK-S1000,,,spot,4362,19294,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9601958,,,train,sda-all,samples/GSE325371/GSM9601958,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": NaN, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM9601959,GSE325371,GSE325371,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,leaf,primary tissue,,,perturbation,luna,,Long term salt stress,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMK-S1000,,,spot,3620,19189,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9601959,,,train,sda-all,samples/GSE325371/GSM9601959,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": NaN, ""life_stage"": 0.67}",disease_status,low_confidence_annotation
GSM9601960,GSE325371,GSE325371,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,leaf,primary tissue,,,perturbation,luna,,Long term salt stress,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMK-S1000,,,spot,4673,21184,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9601960,,,train,sda-all,samples/GSE325371/GSM9601960,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": NaN, ""life_stage"": 0.92}",,
GSM9601961,GSE325371,GSE325371,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,Solanum lycopersicum,4081,tomato,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,plant,luna,,,leaf,primary tissue,,,perturbation,luna,,Long term salt stress,not stated,luna,not stated,,unknown,not stated,,,,,,BMK S1000,release v3,BMKMANU S1000,sequencing-based,BMK-S1000,,,spot,3695,19860,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9601961,,,train,sda-all,samples/GSE325371/GSM9601961,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.47000000000000003, ""uberon"": NaN, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9604821,GSE325489,GSE325489,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE325489:Br6522,Br6522,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,172722,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999989173739823,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604821,,,train,sda-all,samples/GSE325489/GSM9604821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9604822,GSE325489,GSE325489,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE325489:Br2720,Br2720,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,228127,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000091899094794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604822,,,train,sda-all,samples/GSE325489/GSM9604822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9604823,GSE325489,GSE325489,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE325489:Br6432,Br6432,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,195980,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000075496117342,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604823,,,train,sda-all,samples/GSE325489/GSM9604823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9604824,GSE325489,GSE325489,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001882,nucleus accumbens,nucleus accumbens,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE325489:Br6471,Br6471,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,188503,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999621883237544,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604824,,,train,sda-all,samples/GSE325489/GSM9604824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9608398,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,normal,luna,,Vechicle (DMSO+saline),adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2453,32285,counts,pixel,4.135561133244332,platform_constant,True,H&E,4.135561133244332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608398,,,train,hesrt,samples/GSE325554/GSM9608398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.12, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9608399,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,normal,luna,,Vechicle (DMSO+saline),adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2700,32285,counts,pixel,4.134555868077988,platform_constant,True,H&E,4.134555868077988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608399,,,train,hesrt,samples/GSE325554/GSM9608399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9608400,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,perturbation,luna,,Pacitaxel,adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2636,32285,counts,pixel,4.134555868077998,platform_constant,True,H&E,4.134555868077998,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608400,,,train,hesrt,samples/GSE325554/GSM9608400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608401,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,perturbation,luna,,Pacitaxel,adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2770,32285,counts,pixel,4.134555868077998,platform_constant,True,H&E,4.134555868077998,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608401,,,train,hesrt,samples/GSE325554/GSM9608401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608402,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,perturbation,luna,,Pacitaxel+ABT263,adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2944,32285,counts,pixel,4.135561133244332,platform_constant,True,H&E,4.135561133244332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608402,,,train,hesrt,samples/GSE325554/GSM9608402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9608403,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,perturbation,luna,,Pacitaxel+ABT263,adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2824,32285,counts,pixel,4.134555868077991,platform_constant,True,H&E,4.134555868077991,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608403,,,train,hesrt,samples/GSE325554/GSM9608403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608404,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,perturbation,luna,,Pacitaxel+GCV,adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2842,32285,counts,pixel,4.135561133244344,platform_constant,True,H&E,4.135561133244344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608404,,,train,hesrt,samples/GSE325554/GSM9608404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608405,GSE325554,GSE325554,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,fresh frozen brain,primary tissue,,,perturbation,luna,,Pacitaxel+GCV,adult,age rule: age with unit,adult,9–10 months,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,10x Genomics Visium,,,spot,2927,32285,counts,pixel,4.133550666580125,platform_constant,True,H&E,4.133550666580125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608405,,,train,hesrt,samples/GSE325554/GSM9608405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9609021,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,,,normal,luna,Non-disease control,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,21569,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609021,,,train,sda-all,samples/GSE325587/GSM9609021,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609023,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Class II,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,39162,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609023,,,train,sda-all,samples/GSE325587/GSM9609023,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609025,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,,,normal,luna,Non-disease control,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,23284,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609025,,,train,sda-all,samples/GSE325587/GSM9609025,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609028,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Class III,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,15381,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609028,,,train,sda-all,samples/GSE325587/GSM9609028,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609029,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,,,normal,luna,Non-disease control,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,16434,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609029,,,train,sda-all,samples/GSE325587/GSM9609029,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609031,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Class II,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,15315,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609031,,,train,sda-all,samples/GSE325587/GSM9609031,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9609033,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,MONDO:0850150;MONDO:0005016;MONDO:0005015,kidney cortex disease;diabetic kidney disease;diabetes mellitus,disease,luna,Class IV,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,9780,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609033,,,train,sda-all,samples/GSE325587/GSM9609033,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9609034,GSE325587,GSE325587,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,kidney,luna,UBERON:0001225,cortex of kidney,Kidney cortex,primary tissue,MONDO:0005016;MONDO:0005015,diabetic kidney disease;diabetes mellitus,disease,luna,Class IV,,not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,18723,1008,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609034,,,train,sda-all,samples/GSE325587/GSM9609034,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9610990,GSE325706,GSE325706,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial [ASPS-02_VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,ASPS lung needle biopsy,metastasis,,,disease,luna,,Pre-Treatment Biopsy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,5543,18086,counts,um,1.0,verified,True,H&E-like (heuristic),0.5000133852109071,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9610990,,,train,sda-all,samples/GSE325706/GSM9610990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9610991,GSE325706,GSE325706,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial [ASPS-02_VisiumHD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,ASPS lung needle biopsy,metastasis,,,disease,luna,,Post-Treatment Biopsy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,9750,18086,counts,um,1.0,verified,True,H&E-like (heuristic),1.110673810503713,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9610991,,,train,sda-all,samples/GSE325706/GSM9610991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9612563,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1170,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.904371253389424,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612563,,,train,sda-all,samples/GSE325755/GSM9612563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9612564,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,528,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.908988130685456,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612564,,,train,sda-all,samples/GSE325755/GSM9612564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612565,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,603,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.905506233434166,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612565,,,train,sda-all,samples/GSE325755/GSM9612565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612566,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002095,mesentery,Mesentery Metastasis,metastasis,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1406,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.882858823405881,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612566,,,train,sda-all,samples/GSE325755/GSM9612566,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9612567,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Omental Metastasis,metastasis,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,829,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.876305900488803,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612567,,,train,sda-all,samples/GSE325755/GSM9612567,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9612568,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002358,peritoneum,Omental Metastasis,metastasis,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2562,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.263409988037273,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612568,,,train,sda-all,samples/GSE325755/GSM9612568,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9612569,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0002095,mesentery,Mesentery Metastasis,metastasis,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1794,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.269962465491702,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612569,,,train,sda-all,samples/GSE325755/GSM9612569,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9612570,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,489,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.9189140540657785,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612570,,,train,sda-all,samples/GSE325755/GSM9612570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612571,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1629,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.948862900431554,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612571,,,train,sda-all,samples/GSE325755/GSM9612571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612572,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1267,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.922388940809703,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612572,,,train,sda-all,samples/GSE325755/GSM9612572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612573,GSE325755,GSE325755,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Primary Colon cancer,tumour tissue,MONDO:0021063,malignant colon neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1496,36601,counts,um,1.0,verified,True,blue bright-field stain (heuristic),5.013204729998571,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612573,,,train,sda-all,samples/GSE325755/GSM9612573,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9613077,GSE325769,GSE325769,Multiomics immune profiling of a patient-relevant orthotopic lung cancer model using SEPARATE-Seq [MERSCOPE],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,tumour-bearing lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,123573,315,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,42026061,,GSM9613077,,,train,sda-all,samples/GSE325769/GSM9613077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9613078,GSE325769,GSE325769,Multiomics immune profiling of a patient-relevant orthotopic lung cancer model using SEPARATE-Seq [MERSCOPE],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,tumour-bearing lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,165382,315,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,,VERIFIED,,,,42026061,,GSM9613078,,,train,sda-all,samples/GSE325769/GSM9613078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9613504,GSE325797,GSE325797,Circuit Organization and Transcriptomic Heterogeneity of Sympathetic Circuits Innervating Cranial Structures [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0001989,superior cervical ganglion,Whole ganglion,primary tissue,,,normal,luna,,wild-type mice dissected at P14,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,9822,123,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9613504,,,train,sda-all,samples/GSE325797/GSM9613504,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9613505,GSE325797,GSE325797,Circuit Organization and Transcriptomic Heterogeneity of Sympathetic Circuits Innervating Cranial Structures [MERFISH],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,other,luna,UBERON:0001989,superior cervical ganglion,Whole ganglion,primary tissue,,,normal,luna,,wild-type mice CTB injected at P10 and dissected at P14,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,fixed frozen,fixed-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,22308,123,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9613505,,,train,sda-all,samples/GSE325797/GSM9613505,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9613870,GSE325817,GSE325817,Stroke drives glioma progression through remodeling of the tumor microenvironment [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,tumour tissue,MONDO:0005098;MONDO:0021042,stroke disorder;glioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,visium,,,spot,2206,19465,counts,um,1.0,verified,True,H&E,6.9770723809303155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9613870,,,train,sda-all,samples/GSE325817/GSM9613870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 0.62}",,
GSM9615445,GSE325846,GSE325846,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,small intestine,luna,UBERON:0000160,intestine,gut,primary tissue,,,normal,luna,,Chow diet + PBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1892,23098,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9615445,,,train,sda-all,samples/GSE325846/GSM9615445,sda-tissue-disease-2.4,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9615446,GSE325846,GSE325846,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,small intestine,luna,UBERON:0000160,intestine,gut,primary tissue,,,perturbation,luna,,Chow diet + tirzepatide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1092,23098,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9615446,,,train,sda-all,samples/GSE325846/GSM9615446,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.73, ""life_stage"": 0.9500000000000001}",,
GSM9615447,GSE325846,GSE325846,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,small intestine,luna,UBERON:0000160,intestine,gut,primary tissue,,,perturbation,luna,,High fat diet + PBS,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1490,23098,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9615447,,,train,sda-all,samples/GSE325846/GSM9615447,sda-tissue-disease-2.4,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.93, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9615448,GSE325846,GSE325846,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,small intestine,luna,UBERON:0000160,intestine,gut,primary tissue,,,perturbation,luna,,High fat diet + tirzepatide,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1421,23098,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9615448,,,train,sda-all,samples/GSE325846/GSM9615448,sda-tissue-disease-2.4,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.96, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM9615736,GSE325861,GSE325861,Macrophage signaling associates with fibrogenic program activation in periductal fibroblasts in pediatric primary sclerosing cholangitis.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0013433;MONDO:0015175;MONDO:0005265,primary sclerosing cholangitis;autoimmune pancreatitis;inflammatory bowel disease,disease,luna,primary sclerosing cholangitis,,juvenile,luna,juvenile,10-year-old,female,extracted field,female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,67674,461,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9615736,,,test,sda-all,samples/GSE325861/GSM9615736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9615737,GSE325861,GSE325861,Macrophage signaling associates with fibrogenic program activation in periductal fibroblasts in pediatric primary sclerosing cholangitis.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,MONDO:0013433,primary sclerosing cholangitis,disease,luna,primary sclerosing cholangitis,,juvenile,luna,juvenile,12-year-old,male,extracted field,male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,72536,461,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9615737,,,test,sda-all,samples/GSE325861/GSM9615737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616841,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,adult,age rule: age with unit,adult,14months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,8589,91,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616841,,,train,sda-all,samples/GSE325911/GSM9616841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616842,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,adult,age rule: age with unit,adult,14months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3488,81,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616842,,,train,sda-all,samples/GSE325911/GSM9616842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616843,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,adult,age rule: age with unit,adult,14months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,2457,83,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616843,,,train,sda-all,samples/GSE325911/GSM9616843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616844,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,adult,age rule: age with unit,adult,14months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,4335,99,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616844,,,train,sda-all,samples/GSE325911/GSM9616844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616845,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,adult,age rule: age with unit,adult,14months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,1639,89,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616845,,,train,sda-all,samples/GSE325911/GSM9616845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616846,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,adult,age rule: age with unit,adult,14months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3289,101,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616846,,,train,sda-all,samples/GSE325911/GSM9616846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616847,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,aged,age rule: age with unit,aged,24months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,2438,106,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616847,,,train,sda-all,samples/GSE325911/GSM9616847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616848,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,aged,age rule: age with unit,aged,24months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,2995,102,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616848,,,train,sda-all,samples/GSE325911/GSM9616848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616849,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,aged,age rule: age with unit,aged,24months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,6757,107,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616849,,,train,sda-all,samples/GSE325911/GSM9616849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616850,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,aged,age rule: age with unit,aged,24months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,6851,112,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616850,,,train,sda-all,samples/GSE325911/GSM9616850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616851,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065,amyloidosis,disease,luna,,APP23 heterozygous,aged,age rule: age with unit,aged,24months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,12909,116,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616851,,,train,sda-all,samples/GSE325911/GSM9616851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616852,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,adult,age rule: age with unit,adult,14months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,7653,86,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616852,,,train,sda-all,samples/GSE325911/GSM9616852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616853,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,adult,age rule: age with unit,adult,14months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,2063,62,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616853,,,train,sda-all,samples/GSE325911/GSM9616853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9616854,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,adult,age rule: age with unit,adult,14months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,2146,77,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616854,,,train,sda-all,samples/GSE325911/GSM9616854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616855,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,adult,age rule: age with unit,adult,14months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,7200,83,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616855,,,train,sda-all,samples/GSE325911/GSM9616855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616856,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,adult,age rule: age with unit,adult,14months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3828,81,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616856,,,train,sda-all,samples/GSE325911/GSM9616856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616857,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,adult,age rule: age with unit,adult,14months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3041,77,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616857,,,train,sda-all,samples/GSE325911/GSM9616857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9616858,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,aged,age rule: age with unit,aged,24months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,7546,109,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616858,,,train,sda-all,samples/GSE325911/GSM9616858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616859,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,aged,age rule: age with unit,aged,24months,female,extracted field,female,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,5111,108,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616859,,,train,sda-all,samples/GSE325911/GSM9616859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616860,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,normal,luna,,APP23 wildtype,aged,age rule: age with unit,aged,24months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,4998,109,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616860,,,train,sda-all,samples/GSE325911/GSM9616860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616861,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,,,disease,luna,,APP23 wildtype,aged,age rule: age with unit,aged,24months,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,5513,110,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9616861,,,train,sda-all,samples/GSE325911/GSM9616861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616862,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,70years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,5060,94,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616862,,,train,sda-all,samples/GSE325911/GSM9616862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616863,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,70years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,4039,89,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616863,,,train,sda-all,samples/GSE325911/GSM9616863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616864,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,79years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,9131,90,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616864,,,train,sda-all,samples/GSE325911/GSM9616864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616865,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,77years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3601,87,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616865,,,train,sda-all,samples/GSE325911/GSM9616865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616866,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,77years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3720,85,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616866,,,train,sda-all,samples/GSE325911/GSM9616866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616867,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,76years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3641,95,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616867,,,train,sda-all,samples/GSE325911/GSM9616867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616868,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,76years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3375,96,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616868,,,train,sda-all,samples/GSE325911/GSM9616868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616869,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,76years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3147,92,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616869,,,train,sda-all,samples/GSE325911/GSM9616869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616870,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,70years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,5122,93,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616870,,,train,sda-all,samples/GSE325911/GSM9616870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616871,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,70years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,4550,86,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616871,,,train,sda-all,samples/GSE325911/GSM9616871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616872,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,79years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,6666,82,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616872,,,train,sda-all,samples/GSE325911/GSM9616872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616873,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,77years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3097,87,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616873,,,train,sda-all,samples/GSE325911/GSM9616873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616874,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,77years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,5089,89,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616874,,,train,sda-all,samples/GSE325911/GSM9616874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616875,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,76years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,4906,98,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616875,,,train,sda-all,samples/GSE325911/GSM9616875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616876,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,76years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,3161,87,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616876,,,train,sda-all,samples/GSE325911/GSM9616876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616877,GSE325911,GSE325911,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000956,cerebral cortex,cerebral cortex,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,Alzheimer’s disease,,aged,age rule: age in years,aged,76years,male,extracted field,male,,,,,Molecular Cartography,release v3,Molecular Cartography,imaging-based,Molecular Cartography,,,cell,2041,80,counts,pixel,,unresolved,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616877,,,train,sda-all,samples/GSE325911/GSM9616877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9617482,GSE325935,GSE325935,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,metastasis,,,disease,luna,,ER+/PR-/HER2+ BC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,386809,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999424546542676,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617482,,,train,sda-all,samples/GSE325935/GSM9617482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9617483,GSE325935,GSE325935,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,metastasis,,,disease,luna,,ER-/PR-/HER2- BC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,490687,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000086278299282,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617483,,,train,sda-all,samples/GSE325935/GSM9617483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9617484,GSE325935,GSE325935,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Parieto-occipital,metastasis,,,disease,luna,,ER+/PR-/HER2+ BC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,448149,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034522439586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617484,,,train,sda-all,samples/GSE325935/GSM9617484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9617485,GSE325935,GSE325935,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain,metastasis,,,disease,luna,,ER-/PR-/HER2- BC,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,207277,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000116525972345,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617485,,,train,sda-all,samples/GSE325935/GSM9617485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9618437,GSE325991,GSE325991,High-resolution spatial transcriptomics of human adrenal neoplasms,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,adrenal gland,luna,UBERON:0002369,adrenal gland,TUMOR,tumour tissue,MONDO:0021227,adrenal gland neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,699798,18132,counts,um,1.0,verified,False,,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9618437,,,train,sda-all,samples/GSE325991/GSM9618437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9618494,GSE325996,GSE325996,Interleukin-34 induced Arg1+ macrophages play a key role in breast cancer brain metastasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,mouse cerebellum tissue,metastasis,MONDO:0002913;MONDO:0007254,cerebellar neoplasm;breast cancer,disease,luna,,NO treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3406,19465,counts,um,1.0,verified,True,H&E,4.164517589590606,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42166785,,GSM9618494,,,train,sda-all,samples/GSE325996/GSM9618494,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9618495,GSE325996,GSE325996,Interleukin-34 induced Arg1+ macrophages play a key role in breast cancer brain metastasis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,mouse cerebellum tissue,metastasis,MONDO:0002913;MONDO:0007254,cerebellar neoplasm;breast cancer,disease,luna,,NO treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4017,19465,counts,um,1.0,verified,True,H&E,10.32374001995803,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42166785,,GSM9618495,,,train,sda-all,samples/GSE325996/GSM9618495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9622152,GSE326094,GSE326094,Aberrant laminin signaling drives melanocyte dedifferentiation and unveils a tractable therapeutic target in vitiligo,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0008661,vitiligo,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,117559,18085,counts,um,1.0,verified,True,H&E-like (heuristic),2.6603531619920524,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,41997929,,GSM9622152,,,train,sda-all,samples/GSE326094/GSM9622152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9625200,GSE326204,GSE326204,Wnt-dependent ontogeny of acellular cementum-forming cementoblasts on the tooth root surface,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,oral cavity,luna,UBERON:0003655,molar tooth,Molars,primary tissue,,,normal,luna,,C57BL6,juvenile,age rule: postnatal day,juvenile,P25,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,216197,19059,counts,um,1.0,verified,True,H&E-like (heuristic),1.3412087966431654,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42129164,,GSM9625200,,,test,sda-all,samples/GSE326204/GSM9625200,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.89, ""life_stage"": 0.6900000000000001}",,
GSM9625559,GSE326226,GSE326226,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29816,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625559,,,train,sda-all,samples/GSE326226/GSM9625559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9625560,GSE326226,GSE326226,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22095,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103382681332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625560,,,train,sda-all,samples/GSE326226/GSM9625560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9625561,GSE326226,GSE326226,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,42825,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000147284081536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625561,,,train,sda-all,samples/GSE326226/GSM9625561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9625562,GSE326226,GSE326226,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16587,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625562,,,train,sda-all,samples/GSE326226/GSM9625562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9625563,GSE326226,GSE326226,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,bladder,tumour tissue,MONDO:0004992,cancer,disease,luna,bladder cancer,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20552,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000122125356982,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625563,,,train,sda-all,samples/GSE326226/GSM9625563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9632804,GSE326496,GSE326496,Integrative single cell RNA and spatial profiling identify mechanisms of neonatal brain hemorrhage pathophysiology and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,Control,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,113800,5106,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41353666,,GSM9632804,,,train,sda-all,samples/GSE326496/GSM9632804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9632805,GSE326496,GSE326496,Integrative single cell RNA and spatial profiling identify mechanisms of neonatal brain hemorrhage pathophysiology and repair [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,Mutant,neonatal or infant,luna,neonatal or infant,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,101052,5106,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,41353666,,GSM9632805,,,train,sda-all,samples/GSE326496/GSM9632805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9634314,GSE326553,GSE326553,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain coronal section,primary tissue,MONDO:0005530,opiate dependence,disease,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 1 SAL, 2 MOR)",adult,luna,adult,8 weeks at start of treatment,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,277490,1001,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42637754,,GSM9634314,,,val,sda-all,samples/GSE326553/GSM9634314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9634315,GSE326553,GSE326553,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain coronal section,primary tissue,MONDO:0005530,opiate dependence,disease,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 1 SAL, 2 MOR)",adult,luna,adult,8 weeks at start of treatment,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,237777,1001,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42637754,,GSM9634315,,,val,sda-all,samples/GSE326553/GSM9634315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9634316,GSE326553,GSE326553,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain coronal section,primary tissue,MONDO:0005530,opiate dependence,disease,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 2 SAL, 1 MOR)",adult,luna,adult,8 weeks at start of treatment,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,210385,1001,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42637754,,GSM9634316,,,val,sda-all,samples/GSE326553/GSM9634316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM9634317,GSE326553,GSE326553,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain coronal section,primary tissue,MONDO:0005303,drug dependence,disease,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 2 SAL, 1 MOR)",adult,luna,adult,8 weeks at start of treatment,female,extracted field,female,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,223485,1001,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42637754,,GSM9634317,,,val,sda-all,samples/GSE326553/GSM9634317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM9635995,GSE326636,GSE326636,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Mouse Liver,primary tissue,,,perturbation,luna,,HFD,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3712,19465,counts,um,1.0,verified,True,H&E-like (heuristic),5.66496989563771,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635995,,,train,sda-all,samples/GSE326636/GSM9635995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9635996,GSE326636,GSE326636,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Mouse Liver,primary tissue,,,perturbation,luna,,HFD + S-K,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2967,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.136659912753644,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635996,,,train,sda-all,samples/GSE326636/GSM9635996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9635997,GSE326636,GSE326636,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Mouse Liver,primary tissue,,,normal,luna,,ND,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3062,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.611785900747129,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635997,,,train,sda-all,samples/GSE326636/GSM9635997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9635998,GSE326636,GSE326636,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,Mouse Liver,primary tissue,,,perturbation,luna,,HFD + LMS-K,not stated,luna,not stated,,male,extracted field,male,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2760,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.547579334252316,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635998,,,train,sda-all,samples/GSE326636/GSM9635998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9636011,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23784,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000044386577499,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636011,,,train,sda-all,samples/GSE326639/GSM9636011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636012,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41266,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000089779005524,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636012,,,train,sda-all,samples/GSE326639/GSM9636012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636013,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45342,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103657974754,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636013,,,train,sda-all,samples/GSE326639/GSM9636013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636014,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45338,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.500010366652117,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636014,,,train,sda-all,samples/GSE326639/GSM9636014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636015,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,128850,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000016370541756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636015,,,train,sda-all,samples/GSE326639/GSM9636015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9636016,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56833,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103528242504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636016,,,train,sda-all,samples/GSE326639/GSM9636016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636017,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29451,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.500002760905577,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636017,,,train,sda-all,samples/GSE326639/GSM9636017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9636018,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34506,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000011510128913,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636018,,,train,sda-all,samples/GSE326639/GSM9636018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636019,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23451,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103382681332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636019,,,train,sda-all,samples/GSE326639/GSM9636019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9636020,GSE326639+GSE326753,GSE326639,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,,,perturbation,luna,,Tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38758,13458,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000007391201514,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636020,,,train,sda-all,samples/GSE326639/GSM9636020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM9636817,GSE326660,GSE326660,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Tumor,tumour tissue,MONDO:0019210,cutaneous neuroendocrine carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE326660:2,2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51539,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636817,,,test,sda-all,samples/GSE326660/GSM9636817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9636818,GSE326660,GSE326660,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Tumor,tumour tissue,MONDO:0019210,cutaneous neuroendocrine carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE326660:2,2,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,213088,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999862372694742,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636818,,,test,sda-all,samples/GSE326660/GSM9636818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.48, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9636819,GSE326660,GSE326660,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0015876,pelvic lymph node,Tumor,metastasis,MONDO:0019210,cutaneous neuroendocrine carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE326660:6,6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,106368,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097456388266,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636819,,,test,sda-all,samples/GSE326660/GSM9636819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9636820,GSE326660,GSE326660,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0015876,pelvic lymph node,Tumor,metastasis,MONDO:0019210,cutaneous neuroendocrine carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE326660:6,6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59563,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999812030075186,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636820,,,test,sda-all,samples/GSE326660/GSM9636820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9636821,GSE326660,GSE326660,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0015876,pelvic lymph node,Tumor,metastasis,MONDO:0019210,cutaneous neuroendocrine carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE326660:6,6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,216922,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000060043668123,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636821,,,test,sda-all,samples/GSE326660/GSM9636821,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9636822,GSE326660,GSE326660,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0015876,pelvic lymph node,Tumor,metastasis,MONDO:0019210,cutaneous neuroendocrine carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE326660:6,6,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35429,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000188951490999,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636822,,,test,sda-all,samples/GSE326660/GSM9636822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638040,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,juvenile,age rule: bare number read as years,juvenile,17,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,249420,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000128945739633,VERIFIED,VERIFIED,FAILED,,,VERIFIED,PASS,,,,,GSM9638040,,,train,sda-all,samples/GSE326743/GSM9638040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9638041,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,37,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,329371,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000140977443609,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638041,,,train,sda-all,samples/GSE326743/GSM9638041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9638042,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,32,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,220435,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638042,,,train,sda-all,samples/GSE326743/GSM9638042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638043,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,32,female,extracted field,F,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,396173,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.499979353773098,VERIFIED,VERIFIED,FAILED,,,VERIFIED,PASS,,,,,GSM9638043,,,train,sda-all,samples/GSE326743/GSM9638043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9638044,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,366199,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000072314049586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638044,,,train,sda-all,samples/GSE326743/GSM9638044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638045,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,31,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,331582,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999689980158724,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638045,,,train,sda-all,samples/GSE326743/GSM9638045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638046,GSE326743,GSE326743,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,314413,9749,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000068832599119,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638046,,,train,sda-all,samples/GSE326743/GSM9638046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9641121,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,49050,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998817407757806,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641121,,,train,sda-all,samples/GSE326837/GSM9641121,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.91}",,
GSM9641122,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,19922,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.500010350742296,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641122,,,train,sda-all,samples/GSE326837/GSM9641122,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9641123,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,39123,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641123,,,train,sda-all,samples/GSE326837/GSM9641123,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.81}",,
GSM9641124,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,128632,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999965507726269,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641124,,,train,sda-all,samples/GSE326837/GSM9641124,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.62}",,
GSM9641125,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,131542,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051689508507,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641125,,,train,sda-all,samples/GSE326837/GSM9641125,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.63}",,
GSM9641126,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,78203,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000115684364344,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641126,,,train,sda-all,samples/GSE326837/GSM9641126,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.63}",,
GSM9641127,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,60074,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.499987938520918,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641127,,,train,sda-all,samples/GSE326837/GSM9641127,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.77}",,
GSM9641128,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,43015,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000010904174117,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641128,,,train,sda-all,samples/GSE326837/GSM9641128,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9641129,GSE326837,GSE326837,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,juvenile,luna,juvenile,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,63041,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103495860165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641129,,,train,sda-all,samples/GSE326837/GSM9641129,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9643336,GSE326903,GSE326903,Polarized neocortical organoids with areal signatures upon the formation of anterior and posterior organizers. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,neocortical organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1859,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.738626537005447,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42624107,,GSM9643336,,,test,sda-all,samples/GSE326903/GSM9643336,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9643337,GSE326903,GSE326903,Polarized neocortical organoids with areal signatures upon the formation of anterior and posterior organizers. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,neocortical organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1953,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.671369039408379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42624107,,GSM9643337,,,test,sda-all,samples/GSE326903/GSM9643337,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9643338,GSE326903,GSE326903,Polarized neocortical organoids with areal signatures upon the formation of anterior and posterior organizers. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,neocortical organoid,organoid,,,normal,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3888,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.747508117245197,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42624107,,GSM9643338,,,test,sda-all,samples/GSE326903/GSM9643338,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9643339,GSE326904,GSE326904,Cardiac tertiary immune niches drive immune activation in immune checkpoint inhibitor myocarditis [CosMx],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004496,myocarditis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,83745,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42647623,,GSM9643339,,,train,sda-all,samples/GSE326904/GSM9643339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9643340,GSE326904,GSE326904,Cardiac tertiary immune niches drive immune activation in immune checkpoint inhibitor myocarditis [CosMx],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0004496,myocarditis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,339640,1144,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42647623,,GSM9643340,,,train,sda-all,samples/GSE326904/GSM9643340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9647219,GSE327056,GSE327056,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,adjacent tumor tissue,primary tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4885,36601,counts,um,1.0,verified,True,H&E,4.0476875369143155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647219,,,test,sda-all,samples/GSE327056/GSM9647219,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9647220,GSE327056,GSE327056,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,pancreatic cancer tussue,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3983,36601,counts,um,1.0,verified,True,H&E,4.04712376249616,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647220,,,test,sda-all,samples/GSE327056/GSM9647220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9647221,GSE327056,GSE327056,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0003891,stroma,tumor stroma,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4483,36601,counts,um,1.0,verified,True,H&E,4.046616875407982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647221,,,test,sda-all,samples/GSE327056/GSM9647221,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9647222,GSE327056,GSE327056,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,normal pancreatic tissue,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4724,36601,counts,um,1.0,verified,True,H&E,4.385825585967708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647222,,,test,sda-all,samples/GSE327056/GSM9647222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9648224,GSE327095,GSE327095,C1q and immunoglobulins mediate activity-dependent synapse loss in the adult brain.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Coronal sections including dorsal hippocampi,primary tissue,,,normal,luna,,WT: C57BL/6J control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3715,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42424464,,GSM9648224,,,train,sda-all,samples/GSE327095/GSM9648224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9648225,GSE327095,GSE327095,C1q and immunoglobulins mediate activity-dependent synapse loss in the adult brain.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Coronal sections including dorsal hippocampi,primary tissue,,,normal,luna,,WT: CRISPR-Cas9 edited isogenic control,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3549,32285,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42424464,,GSM9648225,,,train,sda-all,samples/GSE327095/GSM9648225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9648894,GSE327129,GSE327129,Subcellular mRNA localization patterns across tissues resolved with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,cell,24578,14703,counts,um,1.0,verified,True,grayscale bright-field (heuristic),1.407397386724781,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42009650,,GSM9648894,,,train,sda-all,samples/GSE327129/GSM9648894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9648895,GSE327129,GSE327129,Subcellular mRNA localization patterns across tissues resolved with spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,cell,33785,14798,counts,um,1.0,verified,True,grayscale bright-field (heuristic),1.5001001399039453,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42009650,,GSM9648895,,,train,sda-all,samples/GSE327129/GSM9648895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9649271,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,VG-3909,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,168945,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649271,,,val,sda-all,samples/GSE327147/GSM9649271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9649272,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,VG-3909,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,172097,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649272,,,val,sda-all,samples/GSE327147/GSM9649272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9649273,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,VG-3909,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,158715,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649273,,,val,sda-all,samples/GSE327147/GSM9649273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9649274,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,VG-3909,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,164735,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649274,,,val,sda-all,samples/GSE327147/GSM9649274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9649275,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,Vehicle,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,142036,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649275,,,val,sda-all,samples/GSE327147/GSM9649275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9649276,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,Vehicle,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,165959,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649276,,,val,sda-all,samples/GSE327147/GSM9649276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9649277,GSE327147,GSE327147,MERFISH data on seven mouse brain with Abeta pathology,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,5xFAD;hTREM2 amyloidosis mouse,primary tissue,MONDO:0019065;MONDO:0004975,amyloidosis;Alzheimer disease,disease,luna,,Vehicle,adult,age rule: age with unit,adult,7 months,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,164350,565,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649277,,,val,sda-all,samples/GSE327147/GSM9649277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9651110,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,175048,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651110,,,train,sda-all,samples/GSE327192/GSM9651110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651111,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,347335,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651111,,,train,sda-all,samples/GSE327192/GSM9651111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9651112,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,758682,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651112,,,train,sda-all,samples/GSE327192/GSM9651112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9651113,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,720421,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651113,,,train,sda-all,samples/GSE327192/GSM9651113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651114,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,595633,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651114,,,train,sda-all,samples/GSE327192/GSM9651114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9651115,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,569276,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651115,,,train,sda-all,samples/GSE327192/GSM9651115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9651116,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,714523,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651116,,,train,sda-all,samples/GSE327192/GSM9651116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9651117,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,liver,luna,UBERON:0002107,liver,Human liver cancer (HCC),tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,598747,550,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,,,GSM9651117,,,train,sda-all,samples/GSE327192/GSM9651117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651118,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,591143,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651118,,,train,sda-all,samples/GSE327192/GSM9651118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651119,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,738182,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651119,,,train,sda-all,samples/GSE327192/GSM9651119,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9651120,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,647575,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651120,,,train,sda-all,samples/GSE327192/GSM9651120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651121,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,280917,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651121,,,train,sda-all,samples/GSE327192/GSM9651121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9651122,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,274731,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651122,,,train,sda-all,samples/GSE327192/GSM9651122,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9651123,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,681194,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651123,,,train,sda-all,samples/GSE327192/GSM9651123,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9651124,GSE327192,GSE327192,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Human lung cancer (NSCLC),tumour tissue,MONDO:0005233,non-small cell lung carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,453859,550,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9651124,,,train,sda-all,samples/GSE327192/GSM9651124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9652794,GSE327284,GSE327284,"Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury (Spatial data)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0858950;MONDO:0005385,traumatic brain injury;vascular disorder,disease,mondo_predicate (Luna: perturbation),,C57Bl6,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,121967,19070,counts,um,1.0,verified,True,H&E-like (heuristic),2.3827430642964735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42463666,,GSM9652794,,,train,sda-all,samples/GSE327284/GSM9652794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9652795,GSE327284,GSE327284,"Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury (Spatial data)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0858950,traumatic brain injury,disease,luna,,C57Bl6,adult,age rule: age with unit,adult,3 months,male,extracted field,male,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,105589,19070,counts,um,1.0,verified,True,H&E-like (heuristic),2.2431857389186005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42463666,,GSM9652795,,,train,sda-all,samples/GSE327284/GSM9652795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9654047,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Biphasic pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:27278,27278,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50519,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000206076307112,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654047,,,test,sda-all,samples/GSE327347/GSM9654047,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.14, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9654048,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Epithelioid pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:29891,29891,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,298395,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500010329968715,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654048,,,test,sda-all,samples/GSE327347/GSM9654048,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9654049,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Sarcomatoid pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:27306,27306,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,102892,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000044164409375,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654049,,,test,sda-all,samples/GSE327347/GSM9654049,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9654050,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Sarcomatoid pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:27306,27306,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,6947,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000185154707044,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41319863;42138664,,GSM9654050,,,test,sda-all,samples/GSE327347/GSM9654050,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9654051,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Biphasic pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:27278,27278,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48293,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999264532831256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654051,,,test,sda-all,samples/GSE327347/GSM9654051,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9654052,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Epithelioid pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:26599,26599,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,65607,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654052,,,test,sda-all,samples/GSE327347/GSM9654052,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9654053,GSE327347,GSE327347,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,pleural mesothelioma,tumour tissue,MONDO:0003308,pleural mesothelioma,disease,luna,Biphasic pleural mesothelioma,not applicable,not stated,luna,not stated,,unknown,not stated,,GSE327347:27278,27278,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57823,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000014711074496,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654053,,,test,sda-all,samples/GSE327347/GSM9654053,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9656414,GSE327406,GSE327406,"Spatially resolved, integrated single-cell multiomic profiling of the transcriptome and epigenomic targets in frozen tissue sections",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Slide-seq,GEO series text (assay_final.csv),Curio Trekker,sequencing-based,other,,,cell,6113,32285,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42371963,,GSM9656414,,,train,sda-all,samples/GSE327406/GSM9656414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9656850,GSE327441,GSE327441,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002148,locus ceruleus,locus coeruleus,primary tissue,,,normal,luna,neurotypical,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3121,18061,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.803520062425479,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656850,,,train,sda-all,samples/GSE327441/GSM9656850,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9656851,GSE327441,GSE327441,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002148,locus ceruleus,locus coeruleus,primary tissue,,,normal,luna,neurotypical,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2880,18061,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.988825879513817,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656851,,,train,sda-all,samples/GSE327441/GSM9656851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9656852,GSE327441,GSE327441,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002148,locus ceruleus,locus coeruleus,primary tissue,,,normal,luna,neurotypical,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3505,18061,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.611655651530046,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656852,,,train,sda-all,samples/GSE327441/GSM9656852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9656853,GSE327441,GSE327441,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002148,locus ceruleus,locus coeruleus,primary tissue,,,normal,luna,neurotypical,,aged,age rule: bare number read as years,aged,76,female,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3239,18061,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.60818098756864,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656853,,,train,sda-all,samples/GSE327441/GSM9656853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9661871,GSE327581,GSE327581,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0011057;MONDO:0004975,cerebrovascular disorder;Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,204834,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9661871,,,train,sda-all,samples/GSE327581/GSM9661871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9661872,GSE327581,GSE327581,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,164811,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9661872,,,train,sda-all,samples/GSE327581/GSM9661872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9661873,GSE327581,GSE327581,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0005098;MONDO:0004975,stroke disorder;Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,111422,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9661873,,,train,sda-all,samples/GSE327581/GSM9661873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9661874,GSE327581,GSE327581,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,126432,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9661874,,,train,sda-all,samples/GSE327581/GSM9661874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9661875,GSE327581,GSE327581,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0004975,Alzheimer disease,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,131223,1207,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9661875,,,train,sda-all,samples/GSE327581/GSM9661875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9663831,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,Col,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,15798,869,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663831,,,train,sda-all,samples/GSE327709/GSM9663831,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.71, ""uberon"": NaN, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM9663832,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,Col,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,2269,639,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663832,,,train,sda-all,samples/GSE327709/GSM9663832,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9663833,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,Col,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,4022,741,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663833,,,train,sda-all,samples/GSE327709/GSM9663833,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.43, ""uberon"": NaN, ""life_stage"": 0.32}",disease_status;life_stage,low_confidence_annotation
GSM9663834,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,Col,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,6809,787,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663834,,,train,sda-all,samples/GSE327709/GSM9663834,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9663835,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,Col,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,10039,787,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663835,,,train,sda-all,samples/GSE327709/GSM9663835,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.6900000000000001, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9663836,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,hls1,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,2213,820,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663836,,,train,sda-all,samples/GSE327709/GSM9663836,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.8, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9663837,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,hls1,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,5093,952,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663837,,,train,sda-all,samples/GSE327709/GSM9663837,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.63, ""uberon"": NaN, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9663838,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,hls1,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,5889,957,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663838,,,train,sda-all,samples/GSE327709/GSM9663838,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.55, ""uberon"": NaN, ""life_stage"": 0.34}",disease_status;life_stage,low_confidence_annotation
GSM9663839,GSE327709,GSE327709,Transient cell states encode positional information to direct asymmetric growth [MERFISH],Arabidopsis thaliana,3702,thale cress,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,plant,luna,,,,primary tissue,,,perturbation,luna,,hls1,juvenile,luna,juvenile,3-day-old etiolated,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,3833,891,counts,um,1.0,verified,False,,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663839,,,train,sda-all,samples/GSE327709/GSM9663839,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.59, ""uberon"": NaN, ""life_stage"": 0.34}",disease_status;life_stage,low_confidence_annotation
GSM9666080,GSE327796,GSE327796,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,Ciona robusta,1774208,,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,brain,luna,UBERON:0000955,brain,adult neural complex,primary tissue,,,normal,luna,,wild type,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,414,15288,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.275764770585937,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666080,,,train,sda-all,samples/GSE327796/GSM9666080,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 0.77}",,
GSM9666081,GSE327796,GSE327796,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,Ciona robusta,1774208,,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,brain,luna,UBERON:0000955,brain,adult neural complex,primary tissue,,,normal,luna,,wild type,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,532,15288,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.34498940193164,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666081,,,train,sda-all,samples/GSE327796/GSM9666081,sda-tissue-disease-2.4,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM9666082,GSE327796,GSE327796,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,Ciona robusta,1774208,,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,brain,luna,UBERON:0000955,brain,adult neural complex,primary tissue,,,normal,luna,,wild type,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,502,15288,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.275802789206388,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666082,,,train,sda-all,samples/GSE327796/GSM9666082,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9666083,GSE327796,GSE327796,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,Ciona robusta,1774208,,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,brain,luna,UBERON:0000955,brain,adult neural complex,primary tissue,,,normal,luna,,wild type,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,507,15288,counts,um,1.0,verified,True,other bright-field stain (heuristic),4.275203533226089,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666083,,,train,sda-all,samples/GSE327796/GSM9666083,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 0.8200000000000001}",,
GSM9667707,GSE327879,GSE327879,Single-cell spatial transcriptomic analyses of severe Covid-19 lungs identifies  disease-associated spatial niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,primary tissue,,,normal,luna,Control (Cardiac   death),,adult,luna,adult,Mix of 2 patients of 39 and one  patient of 63 years old,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,33925,1010,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,index_column_as_feature,VERIFIED,,,,,,GSM9667707,,,train,sda-all,samples/GSE327879/GSM9667707,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9667708,GSE327879,GSE327879,Single-cell spatial transcriptomic analyses of severe Covid-19 lungs identifies  disease-associated spatial niches,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,,primary tissue,MONDO:0100096,COVID-19,disease,luna,COVID-19 (Cause of   death),,adult,luna,adult,"Composed of 3 patients respectively age 53,63 and 67",unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,43048,1010,counts,pixel,,unresolved,False,,,ABSENT,VERIFIED,VERIFIED,,index_column_as_feature,VERIFIED,,,,,,GSM9667708,,,train,sda-all,samples/GSE327879/GSM9667708,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9668023,GSE327901,GSE327901,A 3D Amphioxus Brain Atlas Illuminates the Blueprint of the Ancestral Chordate Brain and Highlights Unique Vertebrate Innovations,Branchiostoma floridae,7739,Florida lancelet,Branchiostoma floridae,7739,,False,False,GEO organism field,Branchiostoma floridae,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51540,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000008611780916,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42397914,,GSM9668023,,,train,sda-all,samples/GSE327901/GSM9668023,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9674371,GSE328169,GSE328169,CRISP enables comparisons of image-based spatial transcriptomic segmentation quality across ten organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,unknown,luna,,,multiple,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,640573,13454,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9674371,,,test,sda-all,samples/GSE328169/GSM9674371,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.49, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9682589,GSE328422,GSE328422,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0001097,axillary lymph node,lymph node,metastasis,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,treatment-naïve; no neoadjuvant therapy before surgery,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,114695,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000039740573535,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682589,,,train,sda-all,samples/GSE328422/GSM9682589,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.43, ""disease_status"": 0.5700000000000001, ""uberon"": 0.5, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9682590,GSE328422,GSE328422,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,lymph node,metastasis,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,treatment-naïve; no neoadjuvant therapy before surgery,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,144744,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999811875769598,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682590,,,train,sda-all,samples/GSE328422/GSM9682590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9682591,GSE328422,GSE328422,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0001097,axillary lymph node,lymph node,metastasis,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,treatment-naïve; no neoadjuvant therapy before surgery,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,260137,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.499985380116959,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682591,,,train,sda-all,samples/GSE328422/GSM9682591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.9500000000000001, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9682592,GSE328422,GSE328422,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0001097,axillary lymph node,lymph node,metastasis,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,treatment-naïve; no neoadjuvant therapy before surgery,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,123339,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000120465340401,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682592,,,train,sda-all,samples/GSE328422/GSM9682592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.88, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM9682593,GSE328422,GSE328422,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0001097,axillary lymph node,lymph node,metastasis,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,treatment-naïve; no neoadjuvant therapy before surgery,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,291682,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000039697662602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682593,,,train,sda-all,samples/GSE328422/GSM9682593,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 0.5700000000000001, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9682594,GSE328422,GSE328422,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0001097,axillary lymph node,lymph node,metastasis,MONDO:0005494,triple-negative breast carcinoma,disease,luna,,treatment-naïve; no neoadjuvant therapy before surgery,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,258566,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103213376453,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682594,,,train,sda-all,samples/GSE328422/GSM9682594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9683419,GSE328448,GSE328448,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,WT,aged,age rule: age with unit,aged,18months,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,55251,31334,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683419,,,train,sda-all,samples/GSE328448/GSM9683419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9683420,GSE328448,GSE328448,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,WT,aged,age rule: age with unit,aged,18months,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,45553,30165,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683420,,,train,sda-all,samples/GSE328448/GSM9683420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9683421,GSE328448,GSE328448,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,adult,2months,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,24670,25887,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683421,,,train,sda-all,samples/GSE328448/GSM9683421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9683422,GSE328448,GSE328448,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,WT,adult,age rule: age with unit,juvenile,2months,male,extracted field,Male,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,30799,24629,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683422,,,train,sda-all,samples/GSE328448/GSM9683422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM9683939,GSE328460,GSE328460,Single-cell resolution spatial transcriptomics of a mucinous tubular and spindle cell carcinoma using CosMX,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,mucinous tubular and spindle cell carcinoma,tumour tissue,MONDO:0004993;MONDO:0020663,carcinoma;malignant spindle cell neoplasm,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMX,,,cell,118109,980,counts,pixel,,unresolved,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9683939,,,train,sda-all,samples/GSE328460/GSM9683939,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9684206,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,187619,32351,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684206,,,train,sda-all,samples/GSE328481/GSM9684206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684207,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,97923,33157,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684207,,,train,sda-all,samples/GSE328481/GSM9684207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684208,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,47654,33189,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684208,,,train,sda-all,samples/GSE328481/GSM9684208,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684209,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,55741,33172,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684209,,,train,sda-all,samples/GSE328481/GSM9684209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684210,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,33057,33021,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684210,,,train,sda-all,samples/GSE328481/GSM9684210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684211,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,130469,33139,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684211,,,train,sda-all,samples/GSE328481/GSM9684211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684212,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,91660,33135,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684212,,,train,sda-all,samples/GSE328481/GSM9684212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684213,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,138926,33228,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684213,,,train,sda-all,samples/GSE328481/GSM9684213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684214,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,152381,33318,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684214,,,train,sda-all,samples/GSE328481/GSM9684214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684215,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,93239,33281,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684215,,,train,sda-all,samples/GSE328481/GSM9684215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684216,GSE328481,GSE328481,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0005061,lung adenocarcinoma,disease,luna,lung adenocarcinoma,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,70071,33245,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684216,,,train,sda-all,samples/GSE328481/GSM9684216,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9687898,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,perturbation,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23729,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000257484207635,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687898,,,train,sda-all,samples/GSE328700/GSM9687898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687899,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23758,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000292056074767,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687899,,,train,sda-all,samples/GSE328700/GSM9687899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687900,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24081,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49995886804870016,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687900,,,train,sda-all,samples/GSE328700/GSM9687900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687901,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19578,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997768163713774,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687901,,,train,sda-all,samples/GSE328700/GSM9687901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687902,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,perturbation,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19509,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999897414854329,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687902,,,train,sda-all,samples/GSE328700/GSM9687902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687903,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,normal,luna,,Sham,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20474,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997324662495884,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687903,,,train,sda-all,samples/GSE328700/GSM9687903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687904,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,disease,luna,,SNI,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,32694,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.50000365532703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687904,,,train,sda-all,samples/GSE328700/GSM9687904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687905,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,disease,luna,,SNI,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28768,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000274763016898,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687905,,,train,sda-all,samples/GSE328700/GSM9687905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687906,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,disease,luna,,SNI,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21978,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687906,,,train,sda-all,samples/GSE328700/GSM9687906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687907,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,perturbation,luna,,SNI,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,30660,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687907,,,train,sda-all,samples/GSE328700/GSM9687907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687908,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,disease,luna,,SNI,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24626,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000274763016898,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687908,,,train,sda-all,samples/GSE328700/GSM9687908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687909,GSE328700,GSE328700,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002792,lumbar spinal cord,mouse lumbar spinal cord,primary tissue,,,perturbation,luna,,SNI,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24447,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998354180381827,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687909,,,train,sda-all,samples/GSE328700/GSM9687909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9694495,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,275665,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912459413001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694495,,,train,sda-all,samples/GSE328931/GSM9694495,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694496,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,127188,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998534583821796,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694496,,,train,sda-all,samples/GSE328931/GSM9694496,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694497,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,297497,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000019409937888,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694497,,,train,sda-all,samples/GSE328931/GSM9694497,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694498,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,322844,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000071195567752,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694498,,,train,sda-all,samples/GSE328931/GSM9694498,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694499,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,316319,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000069026450936,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694499,,,train,sda-all,samples/GSE328931/GSM9694499,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9694500,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,230482,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000041427308882,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694500,,,train,sda-all,samples/GSE328931/GSM9694500,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9694501,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,203314,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999793268833204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694501,,,train,sda-all,samples/GSE328931/GSM9694501,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9694502,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,261309,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999985225459488,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694502,,,train,sda-all,samples/GSE328931/GSM9694502,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9694503,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,275333,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000095504902585,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694503,,,train,sda-all,samples/GSE328931/GSM9694503,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9694504,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,81449,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000029550827423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694504,,,train,sda-all,samples/GSE328931/GSM9694504,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9694505,GSE328931,GSE328931,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005724,cryptococcosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,141598,13603,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998488608883795,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694505,,,train,sda-all,samples/GSE328931/GSM9694505,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9697685,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8371,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697685,,,val,sda-all,samples/GSE329112/GSM9697685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9697686,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11756,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697686,,,val,sda-all,samples/GSE329112/GSM9697686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9697687,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,9913,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697687,,,val,sda-all,samples/GSE329112/GSM9697687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9697688,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,14291,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697688,,,val,sda-all,samples/GSE329112/GSM9697688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.74}",,
GSM9697689,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10109,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697689,,,val,sda-all,samples/GSE329112/GSM9697689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697690,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11193,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697690,,,val,sda-all,samples/GSE329112/GSM9697690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697691,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11608,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697691,,,val,sda-all,samples/GSE329112/GSM9697691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697692,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10570,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697692,,,val,sda-all,samples/GSE329112/GSM9697692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9697693,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5779,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697693,,,val,sda-all,samples/GSE329112/GSM9697693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM9697694,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,15907,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697694,,,val,sda-all,samples/GSE329112/GSM9697694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM9697695,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,6605,25997,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697695,,,val,sda-all,samples/GSE329112/GSM9697695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9697696,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,2891,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697696,,,val,sda-all,samples/GSE329112/GSM9697696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM9697697,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,4448,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697697,,,val,sda-all,samples/GSE329112/GSM9697697,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM9697698,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,2647,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697698,,,val,sda-all,samples/GSE329112/GSM9697698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM9697699,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11433,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697699,,,val,sda-all,samples/GSE329112/GSM9697699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697700,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,13080,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697700,,,val,sda-all,samples/GSE329112/GSM9697700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697701,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10269,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697701,,,val,sda-all,samples/GSE329112/GSM9697701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697702,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8804,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697702,,,val,sda-all,samples/GSE329112/GSM9697702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM9697703,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8043,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697703,,,val,sda-all,samples/GSE329112/GSM9697703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697704,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,4420,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697704,,,val,sda-all,samples/GSE329112/GSM9697704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697705,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5235,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697705,,,val,sda-all,samples/GSE329112/GSM9697705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM9697706,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,9454,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697706,,,val,sda-all,samples/GSE329112/GSM9697706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9697707,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,7871,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697707,,,val,sda-all,samples/GSE329112/GSM9697707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM9697708,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10549,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697708,,,val,sda-all,samples/GSE329112/GSM9697708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM9697709,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11028,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697709,,,val,sda-all,samples/GSE329112/GSM9697709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697710,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,4848,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697710,,,val,sda-all,samples/GSE329112/GSM9697710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM9697711,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,12694,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697711,,,val,sda-all,samples/GSE329112/GSM9697711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM9697712,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,7327,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697712,,,val,sda-all,samples/GSE329112/GSM9697712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9697713,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,2719,25263,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697713,,,val,sda-all,samples/GSE329112/GSM9697713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9697714,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,4635,25263,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697714,,,val,sda-all,samples/GSE329112/GSM9697714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM9697715,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,4781,25660,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697715,,,val,sda-all,samples/GSE329112/GSM9697715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697716,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,7353,25997,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697716,,,val,sda-all,samples/GSE329112/GSM9697716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9697717,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,7994,25997,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697717,,,val,sda-all,samples/GSE329112/GSM9697717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9697718,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,9917,25263,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697718,,,val,sda-all,samples/GSE329112/GSM9697718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM9697719,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5208,25660,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697719,,,val,sda-all,samples/GSE329112/GSM9697719,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697720,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5727,25660,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697720,,,val,sda-all,samples/GSE329112/GSM9697720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697721,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8720,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697721,,,val,sda-all,samples/GSE329112/GSM9697721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697722,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,3831,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697722,,,val,sda-all,samples/GSE329112/GSM9697722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697723,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,6608,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697723,,,val,sda-all,samples/GSE329112/GSM9697723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697724,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5432,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697724,,,val,sda-all,samples/GSE329112/GSM9697724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697725,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,6967,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697725,,,val,sda-all,samples/GSE329112/GSM9697725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697726,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,6198,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697726,,,val,sda-all,samples/GSE329112/GSM9697726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697727,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,3230,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697727,,,val,sda-all,samples/GSE329112/GSM9697727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697728,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8899,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697728,,,val,sda-all,samples/GSE329112/GSM9697728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697729,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10567,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697729,,,val,sda-all,samples/GSE329112/GSM9697729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697730,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,3476,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697730,,,val,sda-all,samples/GSE329112/GSM9697730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM9697731,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5304,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697731,,,val,sda-all,samples/GSE329112/GSM9697731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697732,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,5819,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697732,,,val,sda-all,samples/GSE329112/GSM9697732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM9697733,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,6154,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697733,,,val,sda-all,samples/GSE329112/GSM9697733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM9697734,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11298,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697734,,,val,sda-all,samples/GSE329112/GSM9697734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697735,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,9790,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697735,,,val,sda-all,samples/GSE329112/GSM9697735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697736,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,13372,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697736,,,val,sda-all,samples/GSE329112/GSM9697736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9697737,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,13120,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697737,,,val,sda-all,samples/GSE329112/GSM9697737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9697738,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,12734,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697738,,,val,sda-all,samples/GSE329112/GSM9697738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697739,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,13068,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697739,,,val,sda-all,samples/GSE329112/GSM9697739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697740,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,13900,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697740,,,val,sda-all,samples/GSE329112/GSM9697740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697741,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,17029,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697741,,,val,sda-all,samples/GSE329112/GSM9697741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9697742,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,17587,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697742,,,val,sda-all,samples/GSE329112/GSM9697742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9697743,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,15583,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697743,,,val,sda-all,samples/GSE329112/GSM9697743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM9697744,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10008,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697744,,,val,sda-all,samples/GSE329112/GSM9697744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697745,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Old,aged,luna,aged,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10553,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697745,,,val,sda-all,samples/GSE329112/GSM9697745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697746,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10148,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697746,,,val,sda-all,samples/GSE329112/GSM9697746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM9697747,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,12732,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697747,,,val,sda-all,samples/GSE329112/GSM9697747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.29}",life_stage,low_confidence_annotation
GSM9697748,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,6789,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697748,,,val,sda-all,samples/GSE329112/GSM9697748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697749,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,10794,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697749,,,val,sda-all,samples/GSE329112/GSM9697749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9697750,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11050,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697750,,,val,sda-all,samples/GSE329112/GSM9697750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9697751,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Middle,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,11730,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697751,,,val,sda-all,samples/GSE329112/GSM9697751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM9697752,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8847,30709,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697752,,,val,sda-all,samples/GSE329112/GSM9697752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9697753,GSE329112,GSE329112,Aging disrupts spatiotemporal coordination in the cycling murine ovary,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,ovary,luna,UBERON:0000992,ovary,Ovary,primary tissue,,,normal,luna,,Young,adult,luna,adult,,unknown,not stated,,,,fresh frozen,fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,Slide-seq,,,bead,8789,21802,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42310395,,GSM9697753,,,val,sda-all,samples/GSE329112/GSM9697753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9699665,GSE329229,GSE329229,Analysis of mouse livers fed with high cholesterol diet and alcohol by spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,"high cholesterol diet, alcohol",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,225376,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000074753887203,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9699665,,,train,sda-all,samples/GSE329229/GSM9699665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9703599,GSE329415,GSE329415,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,Bone,primary tissue,,,disease,luna,,B16F10 injection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77166,13639,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999951817180616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703599,,,train,sda-all,samples/GSE329415/GSM9703599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.92, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9703600,GSE329415,GSE329415,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,Bone,primary tissue,,,disease,luna,,B16F10 injection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,65456,13639,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999876094498596,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703600,,,train,sda-all,samples/GSE329415/GSM9703600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.93, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9703601,GSE329415,GSE329415,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,Bone,primary tissue,,,disease,luna,,B16F10 injection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,140716,13639,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998967795210575,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703601,,,train,sda-all,samples/GSE329415/GSM9703601,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.79, ""disease_status"": 0.87, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9703602,GSE329415,GSE329415,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,Bone,primary tissue,,,disease,luna,,B16F10 injection,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,119458,13639,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092319054653,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703602,,,train,sda-all,samples/GSE329415/GSM9703602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.9500000000000001, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9703603,GSE329415,GSE329415,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,Bone,primary tissue,,,perturbation,luna,,Prf1-/-,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,182887,13639,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999944490262005,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703603,,,train,sda-all,samples/GSE329415/GSM9703603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.66, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9703604,GSE329415,GSE329415,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,Bone,primary tissue,,,perturbation,luna,,Prf1-/-,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,169216,13639,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999969587854606,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703604,,,train,sda-all,samples/GSE329415/GSM9703604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.45, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9709769,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9849,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709769,,,train,sda-all,samples/GSE329718/GSM9709769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709770,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13610,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709770,,,train,sda-all,samples/GSE329718/GSM9709770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709771,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8177,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709771,,,train,sda-all,samples/GSE329718/GSM9709771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709772,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10229,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709772,,,train,sda-all,samples/GSE329718/GSM9709772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709773,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12897,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709773,,,train,sda-all,samples/GSE329718/GSM9709773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709774,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8610,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709774,,,train,sda-all,samples/GSE329718/GSM9709774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709775,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12991,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709775,,,train,sda-all,samples/GSE329718/GSM9709775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709776,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12673,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709776,,,train,sda-all,samples/GSE329718/GSM9709776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709777,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13971,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709777,,,train,sda-all,samples/GSE329718/GSM9709777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709778,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9973,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709778,,,train,sda-all,samples/GSE329718/GSM9709778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709779,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7572,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709779,,,train,sda-all,samples/GSE329718/GSM9709779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709780,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9572,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709780,,,train,sda-all,samples/GSE329718/GSM9709780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709781,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8876,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709781,,,train,sda-all,samples/GSE329718/GSM9709781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709782,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8579,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709782,,,train,sda-all,samples/GSE329718/GSM9709782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709783,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8958,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709783,,,train,sda-all,samples/GSE329718/GSM9709783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709784,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8922,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709784,,,train,sda-all,samples/GSE329718/GSM9709784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709785,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9143,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709785,,,train,sda-all,samples/GSE329718/GSM9709785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709786,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17564,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709786,,,train,sda-all,samples/GSE329718/GSM9709786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709787,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7973,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709787,,,train,sda-all,samples/GSE329718/GSM9709787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709788,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7612,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709788,,,train,sda-all,samples/GSE329718/GSM9709788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709789,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5283,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709789,,,train,sda-all,samples/GSE329718/GSM9709789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709790,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,6800,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709790,,,train,sda-all,samples/GSE329718/GSM9709790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709791,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8086,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709791,,,train,sda-all,samples/GSE329718/GSM9709791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709792,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5099,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709792,,,train,sda-all,samples/GSE329718/GSM9709792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709793,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,20710,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709793,,,train,sda-all,samples/GSE329718/GSM9709793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709794,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17664,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709794,,,train,sda-all,samples/GSE329718/GSM9709794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709795,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15822,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709795,,,train,sda-all,samples/GSE329718/GSM9709795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709796,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12924,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709796,,,train,sda-all,samples/GSE329718/GSM9709796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709797,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,16616,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709797,,,train,sda-all,samples/GSE329718/GSM9709797,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709798,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11262,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709798,,,train,sda-all,samples/GSE329718/GSM9709798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709799,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12281,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709799,,,train,sda-all,samples/GSE329718/GSM9709799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709800,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9371,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709800,,,train,sda-all,samples/GSE329718/GSM9709800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709801,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15146,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709801,,,train,sda-all,samples/GSE329718/GSM9709801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709802,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15426,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709802,,,train,sda-all,samples/GSE329718/GSM9709802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709803,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10968,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709803,,,train,sda-all,samples/GSE329718/GSM9709803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9709804,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11898,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709804,,,train,sda-all,samples/GSE329718/GSM9709804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709805,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10556,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709805,,,train,sda-all,samples/GSE329718/GSM9709805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709806,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10005,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709806,,,train,sda-all,samples/GSE329718/GSM9709806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709807,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9513,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709807,,,train,sda-all,samples/GSE329718/GSM9709807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709808,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9898,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709808,,,train,sda-all,samples/GSE329718/GSM9709808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9709809,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9875,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709809,,,train,sda-all,samples/GSE329718/GSM9709809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9709810,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10376,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709810,,,train,sda-all,samples/GSE329718/GSM9709810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709811,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8260,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709811,,,train,sda-all,samples/GSE329718/GSM9709811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9709812,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8375,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709812,,,train,sda-all,samples/GSE329718/GSM9709812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9709813,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10227,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709813,,,train,sda-all,samples/GSE329718/GSM9709813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9709814,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9965,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709814,,,train,sda-all,samples/GSE329718/GSM9709814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9709815,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7706,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709815,,,train,sda-all,samples/GSE329718/GSM9709815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9709816,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9589,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709816,,,train,sda-all,samples/GSE329718/GSM9709816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9709817,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11271,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709817,,,train,sda-all,samples/GSE329718/GSM9709817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709818,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13442,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709818,,,train,sda-all,samples/GSE329718/GSM9709818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709819,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,20372,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709819,,,train,sda-all,samples/GSE329718/GSM9709819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709820,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13515,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709820,,,train,sda-all,samples/GSE329718/GSM9709820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709821,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10058,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709821,,,train,sda-all,samples/GSE329718/GSM9709821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709822,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10218,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709822,,,train,sda-all,samples/GSE329718/GSM9709822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709823,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9244,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709823,,,train,sda-all,samples/GSE329718/GSM9709823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709824,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8841,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709824,,,train,sda-all,samples/GSE329718/GSM9709824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709825,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12330,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709825,,,train,sda-all,samples/GSE329718/GSM9709825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709826,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14903,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709826,,,train,sda-all,samples/GSE329718/GSM9709826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709827,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11782,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709827,,,train,sda-all,samples/GSE329718/GSM9709827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709828,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10920,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709828,,,train,sda-all,samples/GSE329718/GSM9709828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709829,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11742,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709829,,,train,sda-all,samples/GSE329718/GSM9709829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709830,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12023,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709830,,,train,sda-all,samples/GSE329718/GSM9709830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709831,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8057,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709831,,,train,sda-all,samples/GSE329718/GSM9709831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709832,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9919,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709832,,,train,sda-all,samples/GSE329718/GSM9709832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709833,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12738,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709833,,,train,sda-all,samples/GSE329718/GSM9709833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709834,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11205,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709834,,,train,sda-all,samples/GSE329718/GSM9709834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709835,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14894,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709835,,,train,sda-all,samples/GSE329718/GSM9709835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709836,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,16305,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709836,,,train,sda-all,samples/GSE329718/GSM9709836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709837,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11181,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709837,,,train,sda-all,samples/GSE329718/GSM9709837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709838,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10207,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709838,,,train,sda-all,samples/GSE329718/GSM9709838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709839,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9306,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709839,,,train,sda-all,samples/GSE329718/GSM9709839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709840,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11917,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709840,,,train,sda-all,samples/GSE329718/GSM9709840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709841,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,14769,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709841,,,train,sda-all,samples/GSE329718/GSM9709841,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709842,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17403,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709842,,,train,sda-all,samples/GSE329718/GSM9709842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709843,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,21142,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709843,,,train,sda-all,samples/GSE329718/GSM9709843,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709844,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17599,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709844,,,train,sda-all,samples/GSE329718/GSM9709844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709845,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,15313,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709845,,,train,sda-all,samples/GSE329718/GSM9709845,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709846,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,16049,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709846,,,train,sda-all,samples/GSE329718/GSM9709846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709847,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11855,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709847,,,train,sda-all,samples/GSE329718/GSM9709847,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709848,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8224,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709848,,,train,sda-all,samples/GSE329718/GSM9709848,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9709849,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,17277,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709849,,,train,sda-all,samples/GSE329718/GSM9709849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709850,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12176,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709850,,,train,sda-all,samples/GSE329718/GSM9709850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709851,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,19823,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709851,,,train,sda-all,samples/GSE329718/GSM9709851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709852,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13332,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709852,,,train,sda-all,samples/GSE329718/GSM9709852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709853,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10648,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709853,,,train,sda-all,samples/GSE329718/GSM9709853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709854,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11728,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709854,,,train,sda-all,samples/GSE329718/GSM9709854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709855,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12184,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709855,,,train,sda-all,samples/GSE329718/GSM9709855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709856,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10067,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709856,,,train,sda-all,samples/GSE329718/GSM9709856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709857,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13684,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709857,,,train,sda-all,samples/GSE329718/GSM9709857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709858,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12775,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709858,,,train,sda-all,samples/GSE329718/GSM9709858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709859,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10310,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709859,,,train,sda-all,samples/GSE329718/GSM9709859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709860,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11212,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709860,,,train,sda-all,samples/GSE329718/GSM9709860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709861,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12920,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709861,,,train,sda-all,samples/GSE329718/GSM9709861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709862,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11320,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709862,,,train,sda-all,samples/GSE329718/GSM9709862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709863,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10667,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709863,,,train,sda-all,samples/GSE329718/GSM9709863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709864,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11534,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709864,,,train,sda-all,samples/GSE329718/GSM9709864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709865,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10815,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709865,,,train,sda-all,samples/GSE329718/GSM9709865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709866,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9694,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709866,,,train,sda-all,samples/GSE329718/GSM9709866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709867,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9764,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709867,,,train,sda-all,samples/GSE329718/GSM9709867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709868,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7070,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709868,,,train,sda-all,samples/GSE329718/GSM9709868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709869,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,7205,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709869,,,train,sda-all,samples/GSE329718/GSM9709869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709870,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8021,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709870,,,train,sda-all,samples/GSE329718/GSM9709870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709871,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10195,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709871,,,train,sda-all,samples/GSE329718/GSM9709871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709872,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9703,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709872,,,train,sda-all,samples/GSE329718/GSM9709872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709873,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13184,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709873,,,train,sda-all,samples/GSE329718/GSM9709873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709874,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13307,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709874,,,train,sda-all,samples/GSE329718/GSM9709874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709875,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8645,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709875,,,train,sda-all,samples/GSE329718/GSM9709875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709876,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,11820,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709876,,,train,sda-all,samples/GSE329718/GSM9709876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709877,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10087,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709877,,,train,sda-all,samples/GSE329718/GSM9709877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709878,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13554,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709878,,,train,sda-all,samples/GSE329718/GSM9709878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709879,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,12493,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709879,,,train,sda-all,samples/GSE329718/GSM9709879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709880,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,8744,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709880,,,train,sda-all,samples/GSE329718/GSM9709880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709881,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,13497,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709881,,,train,sda-all,samples/GSE329718/GSM9709881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709882,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,10247,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709882,,,train,sda-all,samples/GSE329718/GSM9709882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709883,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9020,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709883,,,train,sda-all,samples/GSE329718/GSM9709883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709884,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9783,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709884,,,train,sda-all,samples/GSE329718/GSM9709884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709885,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9558,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709885,,,train,sda-all,samples/GSE329718/GSM9709885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709886,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9874,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709886,,,train,sda-all,samples/GSE329718/GSM9709886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709887,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,9877,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709887,,,train,sda-all,samples/GSE329718/GSM9709887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709888,GSE329718,GSE329718,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0002022,insula,brain insula cortex 10μm slice,primary tissue,,,perturbation,luna,,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh frozen,MERFISH/MERSCOPE,release v3,MERFISH,imaging-based,MERFISH,,,cell,5213,484,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709888,,,train,sda-all,samples/GSE329718/GSM9709888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9720098,GSE330153,GSE330153,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Brain Tissue - Hippocampus,primary tissue,,,perturbation,luna,,Trained,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2865,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.174831709130877,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720098,,,val,sda-all,samples/GSE330153/GSM9720098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9720099,GSE330153,GSE330153,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0001954,Ammon's horn,Brain Tissue - Hippocampus,primary tissue,,,perturbation,luna,,Trained,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3055,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.15077914126167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720099,,,val,sda-all,samples/GSE330153/GSM9720099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9720100,GSE330153,GSE330153,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Brain Tissue - Hippocampus,primary tissue,,,normal,luna,,Untrained,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2359,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.1879299021653145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720100,,,val,sda-all,samples/GSE330153/GSM9720100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9720101,GSE330153,GSE330153,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002421,hippocampal formation,Brain Tissue - Hippocampus,primary tissue,,,perturbation,luna,,Untrained,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2661,32285,counts,um,1.0,verified,True,grayscale bright-field (heuristic),4.115636156493802,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720101,,,val,sda-all,samples/GSE330153/GSM9720101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.59, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9720202,GSE330163,GSE330163,Human Myometrial Cell Fate under Chronic Oxidative Stress for Leiomyomagenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001135,smooth muscle tissue,smooth muscle,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,156276,18085,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42539031,,GSM9720202,,,train,sda-all,samples/GSE330163/GSM9720202,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.78, ""disease_status"": 0.28, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9720203,GSE330163,GSE330163,Human Myometrial Cell Fate under Chronic Oxidative Stress for Leiomyomagenesis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uterus,luna,UBERON:0001135,smooth muscle tissue,smooth muscle,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium_hd,,,bin,295501,18085,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42539031,,GSM9720203,,,train,sda-all,samples/GSE330163/GSM9720203,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.54, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9721577,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,71,male,extracted field,M,GSE330224:NY7149,NY7149,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4617,36601,counts,um,1.0,verified,True,H&E,4.033834143386723,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721577,,,train,sda-all,samples/GSE330224/GSM9721577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721578,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,71,male,extracted field,M,GSE330224:NY7149,NY7149,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4486,36601,counts,um,1.0,verified,True,H&E,3.984540792565202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721578,,,train,sda-all,samples/GSE330224/GSM9721578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721579,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,71,male,extracted field,M,GSE330224:NY7149,NY7149,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4909,36601,counts,um,1.0,verified,True,H&E,3.9643241356001018,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721579,,,train,sda-all,samples/GSE330224/GSM9721579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721580,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4729,36601,counts,um,1.0,verified,True,H&E,3.862631176435037,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721580,,,train,sda-all,samples/GSE330224/GSM9721580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721581,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4982,36601,counts,um,1.0,verified,True,H&E,3.8662886351151284,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721581,,,train,sda-all,samples/GSE330224/GSM9721581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721582,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4802,36601,counts,um,1.0,verified,True,H&E,3.818826320828604,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721582,,,train,sda-all,samples/GSE330224/GSM9721582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721583,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4654,36601,counts,um,1.0,verified,True,H&E,3.8194451267323344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721583,,,train,sda-all,samples/GSE330224/GSM9721583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721584,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,74,male,extracted field,M,GSE330224:NEUXZ580AW6,NEUXZ580AW6,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4937,36601,counts,um,1.0,verified,True,H&E,3.8607990104583356,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721584,,,train,sda-all,samples/GSE330224/GSM9721584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721585,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,74,male,extracted field,M,GSE330224:NEUXZ580AW6,NEUXZ580AW6,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4958,36601,counts,um,1.0,verified,True,H&E,3.860537237293325,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721585,,,train,sda-all,samples/GSE330224/GSM9721585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721587,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4970,36601,counts,um,1.0,verified,True,H&E,3.8546129390296326,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721587,,,train,sda-all,samples/GSE330224/GSM9721587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721588,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001384,primary motor cortex,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3785,36601,counts,um,1.0,verified,True,H&E,3.867415293013679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721588,,,train,sda-all,samples/GSE330224/GSM9721588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721589,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4829,36601,counts,um,1.0,verified,True,H&E,3.8355595489458354,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721589,,,train,sda-all,samples/GSE330224/GSM9721589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721590,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4806,36601,counts,um,1.0,verified,True,H&E,3.8455131304399477,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721590,,,train,sda-all,samples/GSE330224/GSM9721590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9721591,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4986,36601,counts,um,1.0,verified,True,H&E,3.8434700641954747,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721591,,,train,sda-all,samples/GSE330224/GSM9721591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9721592,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.858169857108779,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721592,,,train,sda-all,samples/GSE330224/GSM9721592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721593,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4748,36601,counts,um,1.0,verified,True,H&E,3.8829748419060652,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721593,,,train,sda-all,samples/GSE330224/GSM9721593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721594,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4939,36601,counts,um,1.0,verified,True,H&E,3.8666296333160872,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721594,,,train,sda-all,samples/GSE330224/GSM9721594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721595,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.8837094013024545,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721595,,,train,sda-all,samples/GSE330224/GSM9721595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9721596,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,33,female,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4976,36601,counts,um,1.0,verified,True,H&E,3.881809811295953,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721596,,,train,sda-all,samples/GSE330224/GSM9721596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721597,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4840,36601,counts,um,1.0,verified,True,H&E,3.8766413744573165,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721597,,,train,sda-all,samples/GSE330224/GSM9721597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721598,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4874,36601,counts,um,1.0,verified,True,H&E,3.8839762805437217,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721598,,,train,sda-all,samples/GSE330224/GSM9721598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721599,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,female,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3259,36601,counts,um,1.0,verified,True,H&E,3.890607415657653,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721599,,,train,sda-all,samples/GSE330224/GSM9721599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721600,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,female,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4000,36601,counts,um,1.0,verified,True,H&E,3.904974457545604,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721600,,,train,sda-all,samples/GSE330224/GSM9721600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721601,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,female,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3895,36601,counts,um,1.0,verified,True,H&E,3.9015057518300393,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721601,,,train,sda-all,samples/GSE330224/GSM9721601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721602,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,female,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3573,36601,counts,um,1.0,verified,True,H&E,3.897512571305688,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721602,,,train,sda-all,samples/GSE330224/GSM9721602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721603,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.887868727230767,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721603,,,train,sda-all,samples/GSE330224/GSM9721603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721604,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4976,36601,counts,um,1.0,verified,True,H&E,3.920605312209149,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721604,,,train,sda-all,samples/GSE330224/GSM9721604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721605,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4409,36601,counts,um,1.0,verified,True,H&E,3.8900792952116077,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721605,,,train,sda-all,samples/GSE330224/GSM9721605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721606,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4416,36601,counts,um,1.0,verified,True,H&E,3.9210475303426358,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721606,,,train,sda-all,samples/GSE330224/GSM9721606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721607,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4980,36601,counts,um,1.0,verified,True,H&E,3.9055094396307446,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721607,,,train,sda-all,samples/GSE330224/GSM9721607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721608,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4710,36601,counts,um,1.0,verified,True,H&E,3.902295153799856,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721608,,,train,sda-all,samples/GSE330224/GSM9721608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721609,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4310,36601,counts,um,1.0,verified,True,H&E,3.899094104513946,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721609,,,train,sda-all,samples/GSE330224/GSM9721609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721610,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4504,36601,counts,um,1.0,verified,True,H&E,3.903599400412696,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721610,,,train,sda-all,samples/GSE330224/GSM9721610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721611,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4647,36601,counts,um,1.0,verified,True,H&E,3.8948396671267735,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721611,,,train,sda-all,samples/GSE330224/GSM9721611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721612,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4476,36601,counts,um,1.0,verified,True,H&E,3.899699258332204,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721612,,,train,sda-all,samples/GSE330224/GSM9721612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721613,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3617,36601,counts,um,1.0,verified,True,H&E,3.913780998430285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721613,,,train,sda-all,samples/GSE330224/GSM9721613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721614,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4187,36601,counts,um,1.0,verified,True,H&E,3.904962826998218,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721614,,,train,sda-all,samples/GSE330224/GSM9721614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721615,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4636,36601,counts,um,1.0,verified,True,H&E,3.8929094711308663,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721615,,,train,sda-all,samples/GSE330224/GSM9721615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721616,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4573,36601,counts,um,1.0,verified,True,H&E,3.930407848387514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721616,,,train,sda-all,samples/GSE330224/GSM9721616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9721617,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3858,36601,counts,um,1.0,verified,True,H&E,3.8957168856311983,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721617,,,train,sda-all,samples/GSE330224/GSM9721617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721618,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,54,female,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4550,36601,counts,um,1.0,verified,True,H&E,3.8712001395165623,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721618,,,train,sda-all,samples/GSE330224/GSM9721618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9721619,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4301,36601,counts,um,1.0,verified,True,H&E,3.936000293873908,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721619,,,train,sda-all,samples/GSE330224/GSM9721619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721620,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4526,36601,counts,um,1.0,verified,True,H&E,3.8790886090098535,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721620,,,train,sda-all,samples/GSE330224/GSM9721620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721621,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,58,female,extracted field,F,GSE330224:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4664,36601,counts,um,1.0,verified,True,H&E,3.900179473580256,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721621,,,train,sda-all,samples/GSE330224/GSM9721621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM9721622,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,58,female,extracted field,F,GSE330224:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3450,36601,counts,um,1.0,verified,True,H&E,3.909884875865368,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721622,,,train,sda-all,samples/GSE330224/GSM9721622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9721623,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3648,36601,counts,um,1.0,verified,True,H&E,3.8634268241623078,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721623,,,train,sda-all,samples/GSE330224/GSM9721623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9721624,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4473,36601,counts,um,1.0,verified,True,H&E,3.9045875793271314,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721624,,,train,sda-all,samples/GSE330224/GSM9721624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9721625,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,58,female,extracted field,F,GSE330224:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4919,36601,counts,um,1.0,verified,True,H&E,3.8984061008423554,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721625,,,train,sda-all,samples/GSE330224/GSM9721625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9721626,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,58,female,extracted field,F,GSE330224:SD028/12,SD028/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3915,36601,counts,um,1.0,verified,True,H&E,3.8877528256280582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721626,,,train,sda-all,samples/GSE330224/GSM9721626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9721627,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4589,36601,counts,um,1.0,verified,True,H&E,3.913542272548379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721627,,,train,sda-all,samples/GSE330224/GSM9721627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721628,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD050/19,SD050/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4285,36601,counts,um,1.0,verified,True,H&E,3.9054536055233027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721628,,,train,sda-all,samples/GSE330224/GSM9721628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721629,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3409,36601,counts,um,1.0,verified,True,H&E,3.8918785661680126,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721629,,,train,sda-all,samples/GSE330224/GSM9721629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721630,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3634,36601,counts,um,1.0,verified,True,H&E,3.9383659888438936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721630,,,train,sda-all,samples/GSE330224/GSM9721630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9721631,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,55,male,extracted field,M,GSE330224:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4197,36601,counts,um,1.0,verified,True,H&E,3.8965135433388554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721631,,,train,sda-all,samples/GSE330224/GSM9721631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9721632,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,55,male,extracted field,M,GSE330224:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4241,36601,counts,um,1.0,verified,True,H&E,3.8970950617810827,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721632,,,train,sda-all,samples/GSE330224/GSM9721632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9721633,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:SD047/13,SD047/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3475,36601,counts,um,1.0,verified,True,H&E,3.936401868675475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721633,,,train,sda-all,samples/GSE330224/GSM9721633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9721634,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,55,male,extracted field,M,GSE330224:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4018,36601,counts,um,1.0,verified,True,H&E,3.938572780607701,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721634,,,train,sda-all,samples/GSE330224/GSM9721634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721635,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,55,male,extracted field,M,GSE330224:SD034/19,SD034/19,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3779,36601,counts,um,1.0,verified,True,H&E,3.9256814516965686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721635,,,train,sda-all,samples/GSE330224/GSM9721635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9721636,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,GSE330224:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4792,36601,counts,um,1.0,verified,True,H&E,3.9224777225582663,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721636,,,train,sda-all,samples/GSE330224/GSM9721636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721637,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,GSE330224:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4247,36601,counts,um,1.0,verified,True,H&E,3.9171074459401343,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721637,,,train,sda-all,samples/GSE330224/GSM9721637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721638,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,GSE330224:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4697,36601,counts,um,1.0,verified,True,H&E,3.905121759195869,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721638,,,train,sda-all,samples/GSE330224/GSM9721638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721639,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,73,male,extracted field,M,GSE330224:SD006/17,SD006/17,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3953,36601,counts,um,1.0,verified,True,H&E,3.881986065462449,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721639,,,train,sda-all,samples/GSE330224/GSM9721639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721640,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4456,36601,counts,um,1.0,verified,True,H&E,3.901537641220136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721640,,,train,sda-all,samples/GSE330224/GSM9721640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721641,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3408,36601,counts,um,1.0,verified,True,H&E,3.910759440483789,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721641,,,train,sda-all,samples/GSE330224/GSM9721641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721642,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,GSE330224:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4504,36601,counts,um,1.0,verified,True,H&E,3.8637463986546465,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721642,,,train,sda-all,samples/GSE330224/GSM9721642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9721643,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:SD008/13,SD008/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4727,36601,counts,um,1.0,verified,True,H&E,3.9021013441411445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721643,,,train,sda-all,samples/GSE330224/GSM9721643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9721644,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,GSE330224:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4396,36601,counts,um,1.0,verified,True,H&E,3.9243344434859666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721644,,,train,sda-all,samples/GSE330224/GSM9721644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9721645,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,47,female,extracted field,F,GSE330224:SD012/13,SD012/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4483,36601,counts,um,1.0,verified,True,H&E,3.892783706640866,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721645,,,train,sda-all,samples/GSE330224/GSM9721645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9721646,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4842,36601,counts,um,1.0,verified,True,H&E,3.931353017630463,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721646,,,train,sda-all,samples/GSE330224/GSM9721646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721647,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4830,36601,counts,um,1.0,verified,True,H&E,4.536115256694819,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721647,,,train,sda-all,samples/GSE330224/GSM9721647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721648,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,49,female,extracted field,F,GSE330224:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3431,36601,counts,um,1.0,verified,True,H&E,3.9087953141198986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721648,,,train,sda-all,samples/GSE330224/GSM9721648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721649,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4557,36601,counts,um,1.0,verified,True,H&E,3.8894627312219536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721649,,,train,sda-all,samples/GSE330224/GSM9721649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721650,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:SD014/16,SD014/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4467,36601,counts,um,1.0,verified,True,H&E,3.9148821557173643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721650,,,train,sda-all,samples/GSE330224/GSM9721650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721651,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,49,female,extracted field,F,GSE330224:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4944,36601,counts,um,1.0,verified,True,H&E,3.8968752710271426,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721651,,,train,sda-all,samples/GSE330224/GSM9721651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9721652,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,49,female,extracted field,F,GSE330224:SD015/16,SD015/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4468,36601,counts,um,1.0,verified,True,H&E,3.942321985876636,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721652,,,train,sda-all,samples/GSE330224/GSM9721652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721653,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4285,36601,counts,um,1.0,verified,True,H&E,3.9209329643171285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721653,,,train,sda-all,samples/GSE330224/GSM9721653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721654,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3851,36601,counts,um,1.0,verified,True,H&E,3.8964856518208477,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721654,,,train,sda-all,samples/GSE330224/GSM9721654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9721655,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,66,female,extracted field,F,GSE330224:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4032,36601,counts,um,1.0,verified,True,H&E,3.9432737923050563,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721655,,,train,sda-all,samples/GSE330224/GSM9721655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721656,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,66,female,extracted field,F,GSE330224:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4136,36601,counts,um,1.0,verified,True,H&E,3.9081566831084253,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721656,,,train,sda-all,samples/GSE330224/GSM9721656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9721657,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD026/12,SD026/12,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4142,36601,counts,um,1.0,verified,True,H&E,3.9089590136228924,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721657,,,train,sda-all,samples/GSE330224/GSM9721657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721658,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,66,female,extracted field,F,GSE330224:SD049/15,SD049/15,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4470,36601,counts,um,1.0,verified,True,H&E,3.927923411275761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721658,,,train,sda-all,samples/GSE330224/GSM9721658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721659,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4220,36601,counts,um,1.0,verified,True,H&E,3.930032281172579,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721659,,,train,sda-all,samples/GSE330224/GSM9721659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9721660,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4946,36601,counts,um,1.0,verified,True,H&E,3.9343875893749396,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721660,,,train,sda-all,samples/GSE330224/GSM9721660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9721661,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3541,36601,counts,um,1.0,verified,True,H&E,3.9274820560548367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721661,,,train,sda-all,samples/GSE330224/GSM9721661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721662,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,"Non-neurological control, MS",,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:SD011/18,SD011/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4296,36601,counts,um,1.0,verified,True,H&E,3.9306720298103324,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721662,,,train,sda-all,samples/GSE330224/GSM9721662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721663,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,"Non-neurological control, MS",,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:SD011/18,SD011/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4505,36601,counts,um,1.0,verified,True,H&E,3.9388110219134638,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721663,,,train,sda-all,samples/GSE330224/GSM9721663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721664,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,63,male,extracted field,M,GSE330224:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3824,36601,counts,um,1.0,verified,True,H&E,3.9523349131507013,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721664,,,train,sda-all,samples/GSE330224/GSM9721664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9721665,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,63,male,extracted field,M,GSE330224:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4121,36601,counts,um,1.0,verified,True,H&E,3.932065562659565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721665,,,train,sda-all,samples/GSE330224/GSM9721665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721666,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,"Non-neurological control, MS",,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:SD011/18,SD011/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4269,36601,counts,um,1.0,verified,True,H&E,3.9350816119138163,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721666,,,train,sda-all,samples/GSE330224/GSM9721666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9721667,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,"Non-neurological control, MS",,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:SD011/18,SD011/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4577,36601,counts,um,1.0,verified,True,H&E,3.9282205140316804,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721667,,,train,sda-all,samples/GSE330224/GSM9721667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9721668,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,63,male,extracted field,M,GSE330224:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4712,36601,counts,um,1.0,verified,True,H&E,3.9502808483323,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721668,,,train,sda-all,samples/GSE330224/GSM9721668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9721669,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,63,male,extracted field,M,GSE330224:SD030/18,SD030/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4888,36601,counts,um,1.0,verified,True,H&E,3.9401984544538786,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721669,,,train,sda-all,samples/GSE330224/GSM9721669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9721670,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD010/14,SD010/14,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4946,36601,counts,um,1.0,verified,True,H&E,3.919888535342243,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721670,,,train,sda-all,samples/GSE330224/GSM9721670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM9721671,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD010/14,SD010/14,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4975,36601,counts,um,1.0,verified,True,H&E,3.9270528516672982,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721671,,,train,sda-all,samples/GSE330224/GSM9721671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721672,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD010/14,SD010/14,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4857,36601,counts,um,1.0,verified,True,H&E,3.945305471518055,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721672,,,train,sda-all,samples/GSE330224/GSM9721672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9721673,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD010/14,SD010/14,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4852,36601,counts,um,1.0,verified,True,H&E,3.9476646682051593,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721673,,,train,sda-all,samples/GSE330224/GSM9721673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721674,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4078,36601,counts,um,1.0,verified,True,H&E,3.8992609956040623,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721674,,,train,sda-all,samples/GSE330224/GSM9721674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721675,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4418,36601,counts,um,1.0,verified,True,H&E,3.861566352089657,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721675,,,train,sda-all,samples/GSE330224/GSM9721675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721676,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4383,36601,counts,um,1.0,verified,True,H&E,3.856743671586534,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721676,,,train,sda-all,samples/GSE330224/GSM9721676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721677,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4614,36601,counts,um,1.0,verified,True,H&E,3.917176110345185,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721677,,,train,sda-all,samples/GSE330224/GSM9721677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9721678,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:SD006/13,SD006/13,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4034,36601,counts,um,1.0,verified,True,H&E,3.961808367027013,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721678,,,train,sda-all,samples/GSE330224/GSM9721678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9721679,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4771,36601,counts,um,1.0,verified,True,H&E,3.8812353278353835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721679,,,train,sda-all,samples/GSE330224/GSM9721679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721680,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3952,36601,counts,um,1.0,verified,True,H&E,3.8890650411040886,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721680,,,train,sda-all,samples/GSE330224/GSM9721680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721681,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4952,36601,counts,um,1.0,verified,True,H&E,3.8568151965124655,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721681,,,train,sda-all,samples/GSE330224/GSM9721681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721682,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3962,36601,counts,um,1.0,verified,True,H&E,3.8780484241789193,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721682,,,train,sda-all,samples/GSE330224/GSM9721682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721683,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4601,36601,counts,um,1.0,verified,True,H&E,3.8913632061287147,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721683,,,train,sda-all,samples/GSE330224/GSM9721683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721684,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4018,36601,counts,um,1.0,verified,True,H&E,3.8823667090958733,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721684,,,train,sda-all,samples/GSE330224/GSM9721684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721685,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4695,36601,counts,um,1.0,verified,True,H&E,3.855857873445461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721685,,,train,sda-all,samples/GSE330224/GSM9721685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721686,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3876,36601,counts,um,1.0,verified,True,H&E,3.8901544469690914,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721686,,,train,sda-all,samples/GSE330224/GSM9721686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721687,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4220,36601,counts,um,1.0,verified,True,H&E,3.8554201050147077,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721687,,,train,sda-all,samples/GSE330224/GSM9721687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721688,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3883,36601,counts,um,1.0,verified,True,H&E,3.84572761831102,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721688,,,train,sda-all,samples/GSE330224/GSM9721688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721689,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3383,36601,counts,um,1.0,verified,True,H&E,3.8257978627275637,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721689,,,train,sda-all,samples/GSE330224/GSM9721689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721690,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4457,36601,counts,um,1.0,verified,True,H&E,3.8241479323179592,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721690,,,train,sda-all,samples/GSE330224/GSM9721690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721691,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.8812490752202655,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721691,,,train,sda-all,samples/GSE330224/GSM9721691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721692,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4946,36601,counts,um,1.0,verified,True,H&E,3.860513857194805,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721692,,,train,sda-all,samples/GSE330224/GSM9721692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721693,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2230,36601,counts,um,1.0,verified,True,H&E,3.8805258523188577,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721693,,,train,sda-all,samples/GSE330224/GSM9721693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721694,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4842,36601,counts,um,1.0,verified,True,H&E,3.911390460988297,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721694,,,train,sda-all,samples/GSE330224/GSM9721694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721695,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4150,36601,counts,um,1.0,verified,True,H&E,3.909616248701787,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721695,,,train,sda-all,samples/GSE330224/GSM9721695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721696,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4119,36601,counts,um,1.0,verified,True,H&E,3.9245343713943077,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721696,,,train,sda-all,samples/GSE330224/GSM9721696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721697,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4404,36601,counts,um,1.0,verified,True,H&E,3.903549537786024,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721697,,,train,sda-all,samples/GSE330224/GSM9721697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721698,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3032,36601,counts,um,1.0,verified,True,H&E,3.9296946559320225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721698,,,train,sda-all,samples/GSE330224/GSM9721698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721699,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUAV181KYK,NEUAV181KYK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3309,36601,counts,um,1.0,verified,True,H&E,3.9572106967437213,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721699,,,train,sda-all,samples/GSE330224/GSM9721699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721700,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4448,36601,counts,um,1.0,verified,True,H&E,3.9232326038004963,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721700,,,train,sda-all,samples/GSE330224/GSM9721700,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721701,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4121,36601,counts,um,1.0,verified,True,H&E,3.9357546151030522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721701,,,train,sda-all,samples/GSE330224/GSM9721701,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721702,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUAV181KYK,NEUAV181KYK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2647,36601,counts,um,1.0,verified,True,H&E,3.885654789705273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721702,,,train,sda-all,samples/GSE330224/GSM9721702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721703,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUAV181KYK,NEUAV181KYK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3832,36601,counts,um,1.0,verified,True,H&E,3.9270231204700456,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721703,,,train,sda-all,samples/GSE330224/GSM9721703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721704,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4087,36601,counts,um,1.0,verified,True,H&E,3.88950961636853,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721704,,,train,sda-all,samples/GSE330224/GSM9721704,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721705,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,female,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3614,36601,counts,um,1.0,verified,True,H&E,3.9131154397091286,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721705,,,train,sda-all,samples/GSE330224/GSM9721705,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721706,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4941,36601,counts,um,1.0,verified,True,H&E,3.9306410680063375,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721706,,,train,sda-all,samples/GSE330224/GSM9721706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721707,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4615,36601,counts,um,1.0,verified,True,H&E,3.926881895150528,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721707,,,train,sda-all,samples/GSE330224/GSM9721707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721708,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4972,36601,counts,um,1.0,verified,True,H&E,3.965058580554747,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721708,,,train,sda-all,samples/GSE330224/GSM9721708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721709,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,36601,counts,um,1.0,verified,True,H&E,3.9770979313563104,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721709,,,train,sda-all,samples/GSE330224/GSM9721709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721710,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4630,36601,counts,um,1.0,verified,True,H&E,3.9292159925451005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721710,,,train,sda-all,samples/GSE330224/GSM9721710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721711,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.9389193904967237,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721711,,,train,sda-all,samples/GSE330224/GSM9721711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721712,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4956,36601,counts,um,1.0,verified,True,H&E,3.9031797796037044,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721712,,,train,sda-all,samples/GSE330224/GSM9721712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721713,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4818,36601,counts,um,1.0,verified,True,H&E,3.9154096212711056,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721713,,,train,sda-all,samples/GSE330224/GSM9721713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721714,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4722,36601,counts,um,1.0,verified,True,H&E,3.918928104152551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721714,,,train,sda-all,samples/GSE330224/GSM9721714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721715,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.931577198315661,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721715,,,train,sda-all,samples/GSE330224/GSM9721715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721716,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4931,36601,counts,um,1.0,verified,True,H&E,3.9585784431600235,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721716,,,train,sda-all,samples/GSE330224/GSM9721716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721717,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4108,36601,counts,um,1.0,verified,True,H&E,3.9392463361678742,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721717,,,train,sda-all,samples/GSE330224/GSM9721717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721718,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4812,36601,counts,um,1.0,verified,True,H&E,3.9453645717990518,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721718,,,train,sda-all,samples/GSE330224/GSM9721718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721719,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.911442276264034,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721719,,,train,sda-all,samples/GSE330224/GSM9721719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721720,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,male,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4978,36601,counts,um,1.0,verified,True,H&E,3.91182004980159,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721720,,,train,sda-all,samples/GSE330224/GSM9721720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721721,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4448,36601,counts,um,1.0,verified,True,H&E,3.956664113417151,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721721,,,train,sda-all,samples/GSE330224/GSM9721721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721722,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4572,36601,counts,um,1.0,verified,True,H&E,3.9831478088764096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721722,,,train,sda-all,samples/GSE330224/GSM9721722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721723,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4579,36601,counts,um,1.0,verified,True,H&E,3.906426267487017,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721723,,,train,sda-all,samples/GSE330224/GSM9721723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721724,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4398,36601,counts,um,1.0,verified,True,H&E,3.916120767808027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721724,,,train,sda-all,samples/GSE330224/GSM9721724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721725,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4620,36601,counts,um,1.0,verified,True,H&E,3.8930662594319396,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721725,,,train,sda-all,samples/GSE330224/GSM9721725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721726,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4558,36601,counts,um,1.0,verified,True,H&E,3.900792371176228,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721726,,,train,sda-all,samples/GSE330224/GSM9721726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721727,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64.02,female,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4903,36601,counts,um,1.0,verified,True,H&E,3.919131965872795,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721727,,,train,sda-all,samples/GSE330224/GSM9721727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721728,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64.02,female,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4990,36601,counts,um,1.0,verified,True,H&E,3.8574310747580802,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721728,,,train,sda-all,samples/GSE330224/GSM9721728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721729,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4694,36601,counts,um,1.0,verified,True,H&E,3.9037684656810803,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721729,,,train,sda-all,samples/GSE330224/GSM9721729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9721730,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,male,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4640,36601,counts,um,1.0,verified,True,H&E,3.871462416804938,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721730,,,train,sda-all,samples/GSE330224/GSM9721730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721731,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64.02,female,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4263,36601,counts,um,1.0,verified,True,H&E,3.891913622822466,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721731,,,train,sda-all,samples/GSE330224/GSM9721731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721732,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64.02,female,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3918,36601,counts,um,1.0,verified,True,H&E,3.8837592889411607,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721732,,,train,sda-all,samples/GSE330224/GSM9721732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721733,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4521,36601,counts,um,1.0,verified,True,H&E,3.9127844642411587,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721733,,,train,sda-all,samples/GSE330224/GSM9721733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721734,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4154,36601,counts,um,1.0,verified,True,H&E,3.9050250407719442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721734,,,train,sda-all,samples/GSE330224/GSM9721734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721735,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4909,36601,counts,um,1.0,verified,True,H&E,3.918485316769232,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721735,,,train,sda-all,samples/GSE330224/GSM9721735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721736,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,43,male,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4850,36601,counts,um,1.0,verified,True,H&E,3.890758171564677,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721736,,,train,sda-all,samples/GSE330224/GSM9721736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721737,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3836,36601,counts,um,1.0,verified,True,H&E,3.910165433824194,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721737,,,train,sda-all,samples/GSE330224/GSM9721737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721738,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.9166921533552115,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721738,,,train,sda-all,samples/GSE330224/GSM9721738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721739,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4923,36601,counts,um,1.0,verified,True,H&E,3.919872349513773,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721739,,,train,sda-all,samples/GSE330224/GSM9721739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721740,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,61,female,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4933,36601,counts,um,1.0,verified,True,H&E,3.9383290518099647,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721740,,,train,sda-all,samples/GSE330224/GSM9721740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721757,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4739,36601,counts,um,1.0,verified,True,H&E,3.9077325785049215,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721757,,,train,sda-all,samples/GSE330224/GSM9721757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721758,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4333,36601,counts,um,1.0,verified,True,H&E,3.9426285305201314,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721758,,,train,sda-all,samples/GSE330224/GSM9721758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721759,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4124,36601,counts,um,1.0,verified,True,H&E,3.9237643856186653,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721759,,,train,sda-all,samples/GSE330224/GSM9721759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721760,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4397,36601,counts,um,1.0,verified,True,H&E,3.9347164972374995,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721760,,,train,sda-all,samples/GSE330224/GSM9721760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721761,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,72,male,extracted field,M,GSE330224:NEUXD265LJ8,NEUXD265LJ8,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4072,36601,counts,um,1.0,verified,True,H&E,3.926531860020496,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721761,,,train,sda-all,samples/GSE330224/GSM9721761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721762,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,72,male,extracted field,M,GSE330224:NEUXD265LJ8,NEUXD265LJ8,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4601,36601,counts,um,1.0,verified,True,H&E,3.934689457840964,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721762,,,train,sda-all,samples/GSE330224/GSM9721762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721763,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,72,male,extracted field,M,GSE330224:NEUXD265LJ8,NEUXD265LJ8,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3733,36601,counts,um,1.0,verified,True,H&E,3.9465398778537937,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721763,,,train,sda-all,samples/GSE330224/GSM9721763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721764,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4692,36601,counts,um,1.0,verified,True,H&E,3.951726607328189,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721764,,,train,sda-all,samples/GSE330224/GSM9721764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721765,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4950,36601,counts,um,1.0,verified,True,H&E,3.9134851389783702,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721765,,,train,sda-all,samples/GSE330224/GSM9721765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721766,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4009,36601,counts,um,1.0,verified,True,H&E,3.9328511604524676,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721766,,,train,sda-all,samples/GSE330224/GSM9721766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721767,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3956,36601,counts,um,1.0,verified,True,H&E,3.9303472288901022,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721767,,,train,sda-all,samples/GSE330224/GSM9721767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721768,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4593,36601,counts,um,1.0,verified,True,H&E,3.9320846306769592,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721768,,,train,sda-all,samples/GSE330224/GSM9721768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721769,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4810,36601,counts,um,1.0,verified,True,H&E,3.9574814985406377,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721769,,,train,sda-all,samples/GSE330224/GSM9721769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721770,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4074,36601,counts,um,1.0,verified,True,H&E,3.954074214901491,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721770,,,train,sda-all,samples/GSE330224/GSM9721770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721771,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4221,36601,counts,um,1.0,verified,True,H&E,3.9394423904188423,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721771,,,train,sda-all,samples/GSE330224/GSM9721771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721772,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,46,male,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4504,36601,counts,um,1.0,verified,True,H&E,3.932658016811341,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721772,,,train,sda-all,samples/GSE330224/GSM9721772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721773,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,46,male,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3651,36601,counts,um,1.0,verified,True,H&E,3.9513610201113143,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721773,,,train,sda-all,samples/GSE330224/GSM9721773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721774,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3885,36601,counts,um,1.0,verified,True,H&E,3.9337864715218736,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721774,,,train,sda-all,samples/GSE330224/GSM9721774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721775,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4452,36601,counts,um,1.0,verified,True,H&E,3.9303226824682276,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721775,,,train,sda-all,samples/GSE330224/GSM9721775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721776,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,46,male,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3262,36601,counts,um,1.0,verified,True,H&E,3.9628950159071294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721776,,,train,sda-all,samples/GSE330224/GSM9721776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721777,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,46,male,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3295,36601,counts,um,1.0,verified,True,H&E,3.939635204189321,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721777,,,train,sda-all,samples/GSE330224/GSM9721777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9721778,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3826,36601,counts,um,1.0,verified,True,H&E,3.9488682353284217,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721778,,,train,sda-all,samples/GSE330224/GSM9721778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721779,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4746,36601,counts,um,1.0,verified,True,H&E,3.9252833172464405,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721779,,,train,sda-all,samples/GSE330224/GSM9721779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721780,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4185,36601,counts,um,1.0,verified,True,H&E,3.89236016762313,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721780,,,train,sda-all,samples/GSE330224/GSM9721780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721781,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4123,36601,counts,um,1.0,verified,True,H&E,3.932231931938845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721781,,,train,sda-all,samples/GSE330224/GSM9721781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721782,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3355,36601,counts,um,1.0,verified,True,H&E,3.9265930901469113,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721782,,,train,sda-all,samples/GSE330224/GSM9721782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9721783,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3807,36601,counts,um,1.0,verified,True,H&E,3.9539105336755376,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721783,,,train,sda-all,samples/GSE330224/GSM9721783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721784,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,79,female,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4506,36601,counts,um,1.0,verified,True,H&E,3.9549507559916792,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721784,,,train,sda-all,samples/GSE330224/GSM9721784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721785,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,79,female,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4875,36601,counts,um,1.0,verified,True,H&E,3.9576020227073916,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721785,,,train,sda-all,samples/GSE330224/GSM9721785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721786,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4416,36601,counts,um,1.0,verified,True,H&E,3.936468940003593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721786,,,train,sda-all,samples/GSE330224/GSM9721786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721787,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4199,36601,counts,um,1.0,verified,True,H&E,3.94788832055062,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721787,,,train,sda-all,samples/GSE330224/GSM9721787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721788,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,79,female,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3207,36601,counts,um,1.0,verified,True,H&E,3.9596163822957116,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721788,,,train,sda-all,samples/GSE330224/GSM9721788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721789,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,79,female,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4862,36601,counts,um,1.0,verified,True,H&E,3.984588398830031,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721789,,,train,sda-all,samples/GSE330224/GSM9721789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721790,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4602,36601,counts,um,1.0,verified,True,H&E,3.984563099550727,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721790,,,train,sda-all,samples/GSE330224/GSM9721790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721791,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4673,36601,counts,um,1.0,verified,True,H&E,3.9358784999102503,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721791,,,train,sda-all,samples/GSE330224/GSM9721791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721792,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4214,36601,counts,um,1.0,verified,True,H&E,3.947547648639948,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721792,,,train,sda-all,samples/GSE330224/GSM9721792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721793,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4390,36601,counts,um,1.0,verified,True,H&E,3.9408552262179524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721793,,,train,sda-all,samples/GSE330224/GSM9721793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721794,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4116,36601,counts,um,1.0,verified,True,H&E,3.965368564963052,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721794,,,train,sda-all,samples/GSE330224/GSM9721794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721795,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3878,36601,counts,um,1.0,verified,True,H&E,3.9557798598859404,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721795,,,train,sda-all,samples/GSE330224/GSM9721795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721796,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4021,36601,counts,um,1.0,verified,True,H&E,4.032742881895467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721796,,,train,sda-all,samples/GSE330224/GSM9721796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721797,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,70,female,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2741,36601,counts,um,1.0,verified,True,H&E,3.941132395969211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721797,,,train,sda-all,samples/GSE330224/GSM9721797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721798,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3760,36601,counts,um,1.0,verified,True,H&E,3.956290266745499,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721798,,,train,sda-all,samples/GSE330224/GSM9721798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721799,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4827,36601,counts,um,1.0,verified,True,H&E,4.051800128350943,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721799,,,train,sda-all,samples/GSE330224/GSM9721799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721800,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4688,36601,counts,um,1.0,verified,True,H&E,3.930117999477982,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721800,,,train,sda-all,samples/GSE330224/GSM9721800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721801,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976;MONDO:0017276,amyotrophic lateral sclerosis;frontotemporal dementia,disease,luna,ALS-FTD,,aged,age rule: bare number read as years,aged,68,female,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4639,36601,counts,um,1.0,verified,True,H&E,3.9638996348536866,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721801,,,train,sda-all,samples/GSE330224/GSM9721801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9721802,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3620,36601,counts,um,1.0,verified,True,H&E,3.9469011680203034,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721802,,,train,sda-all,samples/GSE330224/GSM9721802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721803,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,64,male,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4934,36601,counts,um,1.0,verified,True,H&E,3.9375812687775005,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721803,,,train,sda-all,samples/GSE330224/GSM9721803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721804,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4019,36601,counts,um,1.0,verified,True,H&E,3.918207930734208,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721804,,,train,sda-all,samples/GSE330224/GSM9721804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721805,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4239,36601,counts,um,1.0,verified,True,H&E,3.9298581791883325,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721805,,,train,sda-all,samples/GSE330224/GSM9721805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721806,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4140,36601,counts,um,1.0,verified,True,H&E,3.9704619104426304,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721806,,,train,sda-all,samples/GSE330224/GSM9721806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721807,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,65,male,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3963,36601,counts,um,1.0,verified,True,H&E,3.949203317884086,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721807,,,train,sda-all,samples/GSE330224/GSM9721807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721808,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4947,36601,counts,um,1.0,verified,True,H&E,4.013508602155177,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721808,,,train,sda-all,samples/GSE330224/GSM9721808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721809,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4126,36601,counts,um,1.0,verified,True,H&E,4.879282568755762,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721809,,,train,sda-all,samples/GSE330224/GSM9721809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721810,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4794,36601,counts,um,1.0,verified,True,H&E,4.032430665934507,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721810,,,train,sda-all,samples/GSE330224/GSM9721810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721811,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4973,36601,counts,um,1.0,verified,True,H&E,4.0068999933779645,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721811,,,train,sda-all,samples/GSE330224/GSM9721811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721812,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:NEURD732NWQ,NEURD732NWQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4847,36601,counts,um,1.0,verified,True,H&E,3.9249476649318673,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721812,,,train,sda-all,samples/GSE330224/GSM9721812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721813,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:NEURD732NWQ,NEURD732NWQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4860,36601,counts,um,1.0,verified,True,H&E,3.9856804034922515,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721813,,,train,sda-all,samples/GSE330224/GSM9721813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721814,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,57,male,extracted field,M,GSE330224:NEURD732NWQ,NEURD732NWQ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4916,36601,counts,um,1.0,verified,True,H&E,3.906855213116718,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721814,,,train,sda-all,samples/GSE330224/GSM9721814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721815,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3815,36601,counts,um,1.0,verified,True,H&E,3.9876186441169774,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721815,,,train,sda-all,samples/GSE330224/GSM9721815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721816,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3406,36601,counts,um,1.0,verified,True,H&E,3.985143532030854,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721816,,,train,sda-all,samples/GSE330224/GSM9721816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721817,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3564,36601,counts,um,1.0,verified,True,H&E,3.960996024765736,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721817,,,train,sda-all,samples/GSE330224/GSM9721817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721818,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3460,36601,counts,um,1.0,verified,True,H&E,3.9713433658700517,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721818,,,train,sda-all,samples/GSE330224/GSM9721818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721819,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4290,36601,counts,um,1.0,verified,True,H&E,3.928793156494199,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721819,,,train,sda-all,samples/GSE330224/GSM9721819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9721820,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3406,36601,counts,um,1.0,verified,True,H&E,3.9164376114592176,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721820,,,train,sda-all,samples/GSE330224/GSM9721820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721821,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Medial,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2960,36601,counts,um,1.0,verified,True,H&E,3.944354988992396,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721821,,,train,sda-all,samples/GSE330224/GSM9721821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721822,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4193,36601,counts,um,1.0,verified,True,H&E,3.90625096835312,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721822,,,train,sda-all,samples/GSE330224/GSM9721822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721823,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4128,36601,counts,um,1.0,verified,True,H&E,3.9063317386895138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721823,,,train,sda-all,samples/GSE330224/GSM9721823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721824,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3979,36601,counts,um,1.0,verified,True,H&E,3.8914392129582307,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721824,,,train,sda-all,samples/GSE330224/GSM9721824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721825,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4504,36601,counts,um,1.0,verified,True,H&E,3.899142327527079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721825,,,train,sda-all,samples/GSE330224/GSM9721825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721826,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4108,36601,counts,um,1.0,verified,True,H&E,3.928697541130549,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721826,,,train,sda-all,samples/GSE330224/GSM9721826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721827,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4278,36601,counts,um,1.0,verified,True,H&E,3.9304678710658596,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721827,,,train,sda-all,samples/GSE330224/GSM9721827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721828,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,GSE330224:NEUXW577JCD,NEUXW577JCD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4766,36601,counts,um,1.0,verified,True,H&E,3.9242417665260105,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721828,,,train,sda-all,samples/GSE330224/GSM9721828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721829,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4466,36601,counts,um,1.0,verified,True,H&E,3.9555868526220177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721829,,,train,sda-all,samples/GSE330224/GSM9721829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721830,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,60,male,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4596,36601,counts,um,1.0,verified,True,H&E,3.9224974149950183,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721830,,,train,sda-all,samples/GSE330224/GSM9721830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721831,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,59,male,extracted field,M,GSE330224:NEUXW577JCD,NEUXW577JCD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4626,36601,counts,um,1.0,verified,True,H&E,3.931372263834568,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721831,,,train,sda-all,samples/GSE330224/GSM9721831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721832,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,51,female,extracted field,F,GSE330224:NY7075,NY7075,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4959,36601,counts,um,1.0,verified,True,H&E,3.956437973513443,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721832,,,train,sda-all,samples/GSE330224/GSM9721832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721833,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,51,female,extracted field,F,GSE330224:NY7075,NY7075,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4983,36601,counts,um,1.0,verified,True,H&E,3.931638315803112,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721833,,,train,sda-all,samples/GSE330224/GSM9721833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721834,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,34,female,extracted field,F,GSE330224:NY7094,NY7094,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4955,36601,counts,um,1.0,verified,True,H&E,3.8835979299365544,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721834,,,train,sda-all,samples/GSE330224/GSM9721834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721835,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,34,female,extracted field,F,GSE330224:NY7094,NY7094,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4958,36601,counts,um,1.0,verified,True,H&E,3.881228271590543,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721835,,,train,sda-all,samples/GSE330224/GSM9721835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9721836,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,51,female,extracted field,F,GSE330224:NY7075,NY7075,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4763,36601,counts,um,1.0,verified,True,H&E,3.8921101781148337,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721836,,,train,sda-all,samples/GSE330224/GSM9721836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9721837,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,51,female,extracted field,F,GSE330224:NY7075,NY7075,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4986,36601,counts,um,1.0,verified,True,H&E,3.8798757979195493,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721837,,,train,sda-all,samples/GSE330224/GSM9721837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721838,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,34,female,extracted field,F,GSE330224:NY7094,NY7094,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4950,36601,counts,um,1.0,verified,True,H&E,3.8815234689085383,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721838,,,train,sda-all,samples/GSE330224/GSM9721838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721839,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,34,female,extracted field,F,GSE330224:NY7094,NY7094,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4803,36601,counts,um,1.0,verified,True,H&E,3.8971339208387112,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721839,,,train,sda-all,samples/GSE330224/GSM9721839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721840,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4673,36601,counts,um,1.0,verified,True,H&E,3.886223221754625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721840,,,train,sda-all,samples/GSE330224/GSM9721840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721841,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4443,36601,counts,um,1.0,verified,True,H&E,3.8699487737311236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721841,,,train,sda-all,samples/GSE330224/GSM9721841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721842,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUBL101LGP,NEUBL101LGP,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4221,36601,counts,um,1.0,verified,True,H&E,3.88026724511731,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721842,,,train,sda-all,samples/GSE330224/GSM9721842,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721843,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4784,36601,counts,um,1.0,verified,True,H&E,3.9025695099238846,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721843,,,train,sda-all,samples/GSE330224/GSM9721843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721844,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:SD004/16,SD004/16,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4781,36601,counts,um,1.0,verified,True,H&E,3.93916150216962,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721844,,,train,sda-all,samples/GSE330224/GSM9721844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721845,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUBL101LGP,NEUBL101LGP,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4651,36601,counts,um,1.0,verified,True,H&E,3.956048273015538,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721845,,,train,sda-all,samples/GSE330224/GSM9721845,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721846,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,male,extracted field,M,GSE330224:NEUBL101LGP,NEUBL101LGP,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4720,36601,counts,um,1.0,verified,True,H&E,3.900506370869296,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721846,,,train,sda-all,samples/GSE330224/GSM9721846,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721847,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4621,36601,counts,um,1.0,verified,True,H&E,3.925829120690428,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721847,,,train,sda-all,samples/GSE330224/GSM9721847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721848,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4722,36601,counts,um,1.0,verified,True,H&E,3.9331133985979827,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721848,,,train,sda-all,samples/GSE330224/GSM9721848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721849,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4590,36601,counts,um,1.0,verified,True,H&E,3.9303737473805107,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721849,,,train,sda-all,samples/GSE330224/GSM9721849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721850,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4850,36601,counts,um,1.0,verified,True,H&E,3.9756922515517785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721850,,,train,sda-all,samples/GSE330224/GSM9721850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9721851,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2815,36601,counts,um,1.0,verified,True,H&E,3.923350639157875,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721851,,,train,sda-all,samples/GSE330224/GSM9721851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721852,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4270,36601,counts,um,1.0,verified,True,H&E,3.9404557530420656,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721852,,,train,sda-all,samples/GSE330224/GSM9721852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721853,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3989,36601,counts,um,1.0,verified,True,H&E,3.933858425839191,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721853,,,train,sda-all,samples/GSE330224/GSM9721853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721854,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,85,male,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4988,36601,counts,um,1.0,verified,True,H&E,3.957594399145882,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721854,,,train,sda-all,samples/GSE330224/GSM9721854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721855,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUEL766XR1,NEUEL766XR1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,36601,counts,um,1.0,verified,True,H&E,3.921710073942271,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721855,,,train,sda-all,samples/GSE330224/GSM9721855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721856,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUEL766XR1,NEUEL766XR1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3416,36601,counts,um,1.0,verified,True,H&E,3.8768805303727896,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721856,,,train,sda-all,samples/GSE330224/GSM9721856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721857,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,67,male,extracted field,M,GSE330224:NEUEL766XR1,NEUEL766XR1,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4399,36601,counts,um,1.0,verified,True,H&E,3.9071889157040225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721857,,,train,sda-all,samples/GSE330224/GSM9721857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9721858,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4916,36601,counts,um,1.0,verified,True,H&E,3.9030689325554997,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721858,,,train,sda-all,samples/GSE330224/GSM9721858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721859,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.8859729614723837,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721859,,,train,sda-all,samples/GSE330224/GSM9721859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721860,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3907,36601,counts,um,1.0,verified,True,H&E,3.884563662214831,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721860,,,train,sda-all,samples/GSE330224/GSM9721860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721861,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4344,36601,counts,um,1.0,verified,True,H&E,3.896179135541645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721861,,,train,sda-all,samples/GSE330224/GSM9721861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721862,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.865451711944526,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721862,,,train,sda-all,samples/GSE330224/GSM9721862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721863,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,"ALS Spectrum MND, Other Neurological Disorders",,aged,age rule: bare number read as years,aged,69,male,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4879,36601,counts,um,1.0,verified,True,H&E,3.917840812565124,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721863,,,train,sda-all,samples/GSE330224/GSM9721863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721864,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4384,36601,counts,um,1.0,verified,True,H&E,3.888692577605744,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721864,,,train,sda-all,samples/GSE330224/GSM9721864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721865,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,76,female,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3842,36601,counts,um,1.0,verified,True,H&E,3.8493416396011946,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721865,,,train,sda-all,samples/GSE330224/GSM9721865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721866,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,52,male,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4946,36601,counts,um,1.0,verified,True,H&E,3.889445289312504,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721866,,,train,sda-all,samples/GSE330224/GSM9721866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721867,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,52,male,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4983,36601,counts,um,1.0,verified,True,H&E,3.881746761591895,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721867,,,train,sda-all,samples/GSE330224/GSM9721867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721868,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,52,male,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,36601,counts,um,1.0,verified,True,H&E,3.8673227385973172,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721868,,,train,sda-all,samples/GSE330224/GSM9721868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721869,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,adult,age rule: bare number read as years,adult,52,male,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4712,36601,counts,um,1.0,verified,True,H&E,3.924791529982416,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721869,,,train,sda-all,samples/GSE330224/GSM9721869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721870,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4920,36601,counts,um,1.0,verified,True,H&E,3.9118570512378166,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721870,,,train,sda-all,samples/GSE330224/GSM9721870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721871,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4451,36601,counts,um,1.0,verified,True,H&E,3.8835576155272764,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721871,,,train,sda-all,samples/GSE330224/GSM9721871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721872,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4502,36601,counts,um,1.0,verified,True,H&E,3.8973082207041654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721872,,,train,sda-all,samples/GSE330224/GSM9721872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721873,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,80,male,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4211,36601,counts,um,1.0,verified,True,H&E,3.8924289763473734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721873,,,train,sda-all,samples/GSE330224/GSM9721873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721874,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,GSE330224:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4917,36601,counts,um,1.0,verified,True,H&E,3.897005054788699,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721874,,,train,sda-all,samples/GSE330224/GSM9721874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721875,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,GSE330224:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4893,36601,counts,um,1.0,verified,True,H&E,3.900376601510334,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721875,,,train,sda-all,samples/GSE330224/GSM9721875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721876,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,81,female,extracted field,F,GSE330224:SD010/18,SD010/18,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4884,36601,counts,um,1.0,verified,True,H&E,3.907282648234693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721876,,,train,sda-all,samples/GSE330224/GSM9721876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721877,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4591,36601,counts,um,1.0,verified,True,H&E,3.8800932095941136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721877,,,train,sda-all,samples/GSE330224/GSM9721877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721878,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4647,36601,counts,um,1.0,verified,True,H&E,3.8790209673892506,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721878,,,train,sda-all,samples/GSE330224/GSM9721878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721879,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4777,36601,counts,um,1.0,verified,True,H&E,3.911705503787481,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721879,,,train,sda-all,samples/GSE330224/GSM9721879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721880,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,adult,age rule: bare number read as years,adult,62,female,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4838,36601,counts,um,1.0,verified,True,H&E,3.8715211802911433,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721880,,,train,sda-all,samples/GSE330224/GSM9721880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721881,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,68,male,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4551,36601,counts,um,1.0,verified,True,H&E,3.894256968123996,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721881,,,train,sda-all,samples/GSE330224/GSM9721881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721882,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3782,36601,counts,um,1.0,verified,True,H&E,3.8857558177435503,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721882,,,train,sda-all,samples/GSE330224/GSM9721882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721883,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4727,36601,counts,um,1.0,verified,True,H&E,3.8907757139133166,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721883,,,train,sda-all,samples/GSE330224/GSM9721883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721884,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4851,36601,counts,um,1.0,verified,True,H&E,3.886863380800975,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721884,,,train,sda-all,samples/GSE330224/GSM9721884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721885,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,MONDO:0004976,amyotrophic lateral sclerosis,disease,luna,ALS,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4925,36601,counts,um,1.0,verified,True,H&E,3.9008162051783226,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721885,,,train,sda-all,samples/GSE330224/GSM9721885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721886,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,71,male,extracted field,M,GSE330224:NY7149,NY7149,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3411,36601,counts,um,1.0,verified,True,H&E,3.8860999508089766,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721886,,,train,sda-all,samples/GSE330224/GSM9721886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721887,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4990,36601,counts,um,1.0,verified,True,H&E,3.878455173619078,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721887,,,train,sda-all,samples/GSE330224/GSM9721887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721888,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4762,36601,counts,um,1.0,verified,True,H&E,3.90662320478887,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721888,,,train,sda-all,samples/GSE330224/GSM9721888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721889,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4747,36601,counts,um,1.0,verified,True,H&E,3.893890516049536,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721889,,,train,sda-all,samples/GSE330224/GSM9721889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721890,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4887,36601,counts,um,1.0,verified,True,H&E,3.890780362225121,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721890,,,train,sda-all,samples/GSE330224/GSM9721890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721891,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E,3.912492182343667,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721891,,,train,sda-all,samples/GSE330224/GSM9721891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721892,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001851,cortex,Cortex_Motor_Lateral,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4687,36601,counts,um,1.0,verified,True,H&E,3.8885314313118533,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721892,,,train,sda-all,samples/GSE330224/GSM9721892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721893,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4800,36601,counts,um,1.0,verified,True,H&E,3.8711081391922884,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721893,,,train,sda-all,samples/GSE330224/GSM9721893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721894,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spinal cord,luna,UBERON:0002792,lumbar spinal cord,Spinal_Cord_Lumbar,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,75,female,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4966,36601,counts,um,1.0,verified,True,H&E,3.8914275928908455,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721894,,,train,sda-all,samples/GSE330224/GSM9721894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721895,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NY7183,NY7183,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4354,36601,counts,um,1.0,verified,True,H&E,3.873781326496257,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721895,,,train,sda-all,samples/GSE330224/GSM9721895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721896,GSE330224,GSE330224,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0013535,Brodmann (1909) area 4,Cortex_Motor_BA4,primary tissue,,,normal,luna,Non-neurological control,,aged,age rule: bare number read as years,aged,71,female,extracted field,F,GSE330224:NY7183,NY7183,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2670,36601,counts,um,1.0,verified,True,H&E,3.8800084066236167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721896,,,train,sda-all,samples/GSE330224/GSM9721896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9730462,GSE330686,GSE330686,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wild-type,adult,age rule: age with unit,adult,12-month-old,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,57883,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000093021332892,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730462,,,train,sda-all,samples/GSE330686/GSM9730462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9730463,GSE330686,GSE330686,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005574,tauopathy,disease,luna,,Tau transgenic,adult,age rule: age with unit,adult,12-month-old,male,extracted field,Male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63003,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999803605391549,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730463,,,train,sda-all,samples/GSE330686/GSM9730463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9730464,GSE330686,GSE330686,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,Wild-type,adult,age rule: age with unit,adult,12-month-old,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,72622,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000093999097609,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730464,,,train,sda-all,samples/GSE330686/GSM9730464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9730465,GSE330686,GSE330686,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,MONDO:0005574,tauopathy,disease,luna,,Tau transgenic,adult,age rule: age with unit,adult,12-month-old,female,extracted field,Female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,69038,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998778103616814,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730465,,,train,sda-all,samples/GSE330686/GSM9730465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9733696,GSE330849,GSE330849,MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,neonatal or infant,age rule: postnatal day,neonatal or infant,P5,unknown,not stated,,,,fresh frozen,Fresh-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,139637,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42547805,,GSM9733696,,,train,sda-all,samples/GSE330849/GSM9733696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9733697,GSE330849,GSE330849,MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,neonatal or infant,age rule: postnatal day,neonatal or infant,P5,unknown,not stated,,,,fresh frozen,Fresh-frozen,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,118952,550,counts,um,1.0,verified,False,,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42547805,,GSM9733697,,,train,sda-all,samples/GSE330849/GSM9733697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9734766,GSE330886,GSE330886,The challenges of single cell transcriptomics on difficult human tissue: the placenta [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,357577,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999982773668979,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42466067,,GSM9734766,,,train,sda-all,samples/GSE330886/GSM9734766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9736137,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45446,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000044253009206,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736137,,,train,sda-all,samples/GSE330953/GSM9736137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736138,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001153,caecum,Caecum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21515,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948403962575,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736138,,,train,sda-all,samples/GSE330953/GSM9736138,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9736139,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29515,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999671214861088,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736139,,,train,sda-all,samples/GSE330953/GSM9736139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736140,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,50637,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000180747779385,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736140,,,train,sda-all,samples/GSE330953/GSM9736140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736141,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35084,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000295020061364,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736141,,,train,sda-all,samples/GSE330953/GSM9736141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736142,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43530,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736142,,,train,sda-all,samples/GSE330953/GSM9736142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736143,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,33939,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736143,,,train,sda-all,samples/GSE330953/GSM9736143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736144,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Terminal ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,91644,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000109566741798,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736144,,,train,sda-all,samples/GSE330953/GSM9736144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9736145,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16193,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999781829873231,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736145,,,train,sda-all,samples/GSE330953/GSM9736145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736146,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24201,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736146,,,train,sda-all,samples/GSE330953/GSM9736146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736147,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27901,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736147,,,train,sda-all,samples/GSE330953/GSM9736147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736148,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Terminal ileum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20025,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736148,,,train,sda-all,samples/GSE330953/GSM9736148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9736149,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001153,caecum,Caecum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16215,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736149,,,train,sda-all,samples/GSE330953/GSM9736149,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736150,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21966,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736150,,,train,sda-all,samples/GSE330953/GSM9736150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736151,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47862,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736151,,,train,sda-all,samples/GSE330953/GSM9736151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736152,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001153,caecum,Caecum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28371,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736152,,,train,sda-all,samples/GSE330953/GSM9736152,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736153,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001153,caecum,Caecum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41098,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998972715318857,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736153,,,train,sda-all,samples/GSE330953/GSM9736153,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736154,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28380,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998392725936813,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736154,,,train,sda-all,samples/GSE330953/GSM9736154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736155,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,41309,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000141884222474,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736155,,,train,sda-all,samples/GSE330953/GSM9736155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736156,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24399,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998969011429245,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736156,,,train,sda-all,samples/GSE330953/GSM9736156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736157,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,39747,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999927632123067,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736157,,,train,sda-all,samples/GSE330953/GSM9736157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736158,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,53880,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999484642341785,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736158,,,train,sda-all,samples/GSE330953/GSM9736158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736159,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34963,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736159,,,train,sda-all,samples/GSE330953/GSM9736159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736160,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29139,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736160,,,train,sda-all,samples/GSE330953/GSM9736160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736161,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,25263,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736161,,,train,sda-all,samples/GSE330953/GSM9736161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736162,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55451,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000111284219898,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736162,,,train,sda-all,samples/GSE330953/GSM9736162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9736163,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001158,descending colon,Descending colon,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54265,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999673853336995,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736163,,,train,sda-all,samples/GSE330953/GSM9736163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736164,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,43984,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000086076298029,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736164,,,train,sda-all,samples/GSE330953/GSM9736164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736165,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,34169,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000076734192755,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736165,,,train,sda-all,samples/GSE330953/GSM9736165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736166,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75372,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000128945739633,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736166,,,train,sda-all,samples/GSE330953/GSM9736166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736167,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Terminal ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26561,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736167,,,train,sda-all,samples/GSE330953/GSM9736167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9736168,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48017,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736168,,,train,sda-all,samples/GSE330953/GSM9736168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736169,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35884,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736169,,,train,sda-all,samples/GSE330953/GSM9736169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736170,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26764,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736170,,,train,sda-all,samples/GSE330953/GSM9736170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736171,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,63805,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999962454945935,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736171,,,train,sda-all,samples/GSE330953/GSM9736171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736172,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,19108,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000408719346049,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736172,,,train,sda-all,samples/GSE330953/GSM9736172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736173,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24640,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736173,,,train,sda-all,samples/GSE330953/GSM9736173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736174,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27389,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736174,,,train,sda-all,samples/GSE330953/GSM9736174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736175,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001158,descending colon,Descending colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35725,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736175,,,train,sda-all,samples/GSE330953/GSM9736175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736176,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51458,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736176,,,train,sda-all,samples/GSE330953/GSM9736176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736177,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Terminal ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,49342,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736177,,,train,sda-all,samples/GSE330953/GSM9736177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736178,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55499,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999655884377153,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736178,,,train,sda-all,samples/GSE330953/GSM9736178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736179,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Terminal ileum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35839,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000175210252302,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736179,,,train,sda-all,samples/GSE330953/GSM9736179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9736180,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,No treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,48266,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736180,,,train,sda-all,samples/GSE330953/GSM9736180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9736181,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16181,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736181,,,train,sda-all,samples/GSE330953/GSM9736181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736182,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001158,descending colon,Descending colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16221,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736182,,,train,sda-all,samples/GSE330953/GSM9736182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736183,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001158,descending colon,Descending colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14689,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000208750835003,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736183,,,train,sda-all,samples/GSE330953/GSM9736183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736184,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001159,sigmoid colon,Sigmoid colon,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,28220,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499973321293712,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736184,,,train,sda-all,samples/GSE330953/GSM9736184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736185,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,small intestine,luna,UBERON:0002116,ileum,Terminal ileum,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,76574,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998580864898334,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736185,,,train,sda-all,samples/GSE330953/GSM9736185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736186,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005265,inflammatory bowel disease,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,18758,541,counts,um,1.0,verified,False,,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736186,,,train,sda-all,samples/GSE330953/GSM9736186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9736187,GSE330953,GSE330953,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,rectum,luna,UBERON:0001052,rectum,Rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,Treatment,not stated,luna,not stated,,unknown,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,14580,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051482701812,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736187,,,train,sda-all,samples/GSE330953/GSM9736187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9739520,GSE331133,GSE331133,Single-Cell and Spatial Multi-Omics Reveal Estrogen-Mediated Vaginal Wall Microenvironment Remodeling and a Perivascular Reparative Niche in Postmenopausal Pelvic Organ Prolapse,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0036523,wall of vagina,anterior vaginal wall,primary tissue,MONDO:0005039,reproductive system disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,460658,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.638743483266041,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9739520,,,train,sda-all,samples/GSE331133/GSM9739520,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9739528,GSE331133,GSE331133,Single-Cell and Spatial Multi-Omics Reveal Estrogen-Mediated Vaginal Wall Microenvironment Remodeling and a Perivascular Reparative Niche in Postmenopausal Pelvic Organ Prolapse,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0036523,wall of vagina,anterior vaginal wall,primary tissue,MONDO:0000082,pelvic organ prolapse,disease,luna,,topical vaginal estrogen,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,477585,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.633386635652753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9739528,,,train,sda-all,samples/GSE331133/GSM9739528,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9742275,GSE331225,GSE331225,TRPV1–STAT3 signaling as a driver of lethal pathology during pneumococcal nose-to-brain invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,airway,luna,UBERON:0001707,nasal cavity,nasal cavity including olfactory bulb,primary tissue,,,perturbation,luna,,none or methimazole,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,359988,19084,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,,,GSM9742275,,,train,sda-all,samples/GSE331225/GSM9742275,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.97, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9742276,GSE331225,GSE331225,TRPV1–STAT3 signaling as a driver of lethal pathology during pneumococcal nose-to-brain invasion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,head and neck,luna,UBERON:0001707,nasal cavity,nasal cavity including olfactory bulb,primary tissue,,,perturbation,luna,,resiniferatoxin and/or methimazole,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,386851,19084,counts,um,1.0,declared_unverified,False,,,,,,attested,,ATTESTED,,,,,,GSM9742276,,,train,sda-all,samples/GSE331225/GSM9742276,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9743253,GSE331286,GSE331286,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,MI KO,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1830,19465,counts,um,1.0,verified,True,H&E,6.943672285993975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743253,,,train,sda-all,samples/GSE331286/GSM9743253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9743255,GSE331286,GSE331286,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,MI WT,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1998,19465,counts,um,1.0,verified,True,H&E,7.007603996837567,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743255,,,train,sda-all,samples/GSE331286/GSM9743255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9743259,GSE331286,GSE331286,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,MI WT,not stated,luna,not stated,,female,extracted field,Female,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1744,19465,counts,um,1.0,verified,True,H&E,6.942246637567191,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743259,,,train,sda-all,samples/GSE331286/GSM9743259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9743262,GSE331286,GSE331286,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,heart,luna,UBERON:0000948,heart,Heart,primary tissue,MONDO:0005068,myocardial infarction,disease,luna,,MI KO,not stated,luna,not stated,,male,extracted field,Male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2415,19465,counts,um,1.0,verified,True,H&E,7.0091530465476035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743262,,,train,sda-all,samples/GSE331286/GSM9743262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9744831,GSE331374,GSE331374,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain/glioblastoma,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,,Naive,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2930,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.064661132810943,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744831,,,train,sda-all,samples/GSE331374/GSM9744831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9744832,GSE331374,GSE331374,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain/glioblastoma,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,,Naive,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2287,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.077019559258785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744832,,,train,sda-all,samples/GSE331374/GSM9744832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9744833,GSE331374,GSE331374,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain/glioblastoma,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,,BRAFi/MEKi,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2555,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.071406681365135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744833,,,train,sda-all,samples/GSE331374/GSM9744833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9744834,GSE331374,GSE331374,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,brain/glioblastoma,tumour tissue,MONDO:0002501,brain glioblastoma,disease,luna,,Temozolomide,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3228,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.192366741348693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744834,,,train,sda-all,samples/GSE331374/GSM9744834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9746006,GSE331446,GSE331446,Epicardial fat drives macrophage response in atrial cardiomyopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006631,right atrium auricular region,right atrial appendage,primary tissue,MONDO:0005267,heart disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2153,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.5989442750318545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746006,,,val,sda-all,samples/GSE331446/GSM9746006,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746007,GSE331446,GSE331446,Epicardial fat drives macrophage response in atrial cardiomyopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006631,right atrium auricular region,right atrial appendage,primary tissue,MONDO:0004994,cardiomyopathy,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3383,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.597888124925952,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746007,,,val,sda-all,samples/GSE331446/GSM9746007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746008,GSE331446,GSE331446,Epicardial fat drives macrophage response in atrial cardiomyopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006631,right atrium auricular region,right atrial appendage,primary tissue,MONDO:0005267,heart disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1990,17943,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9746008,,,val,sda-all,samples/GSE331446/GSM9746008,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.19, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746009,GSE331446,GSE331446,Epicardial fat drives macrophage response in atrial cardiomyopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006631,right atrium auricular region,right atrial appendage,primary tissue,MONDO:0005267,heart disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2956,17943,counts,um,1.0,verified,True,H&E-like (heuristic),5.099164703505003,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746009,,,val,sda-all,samples/GSE331446/GSM9746009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746010,GSE331446,GSE331446,Epicardial fat drives macrophage response in atrial cardiomyopathy,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,heart,luna,UBERON:0006631,right atrium auricular region,right atrial appendage,primary tissue,MONDO:0005267,heart disorder,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2133,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.090912857714803,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746010,,,val,sda-all,samples/GSE331446/GSM9746010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9749285,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,812720,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999874623871614,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9749285,,,train,sda-all,samples/GSE331531/GSM9749285,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9749287,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,235264,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999088212410037,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9749287,,,train,sda-all,samples/GSE331531/GSM9749287,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9749288,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,661550,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999935430549098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9749288,,,train,sda-all,samples/GSE331531/GSM9749288,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982048,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,170021,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000144472880376,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982048,,,train,sda-all,samples/GSE331531/GSM9982048,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982049,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1281532,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999827332166874,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982049,,,train,sda-all,samples/GSE331531/GSM9982049,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982050,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,173494,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998843832148765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982050,,,train,sda-all,samples/GSE331531/GSM9982050,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982051,GSE331531,GSE331531,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,709176,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103403450721,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982051,,,train,sda-all,samples/GSE331531/GSM9982051,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9750808,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4571,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.7565131845344633,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750808,,,train,sda-all,samples/GSE332563/GSM9750808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750809,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4963,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8341433667262255,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750809,,,train,sda-all,samples/GSE332563/GSM9750809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9750810,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4988,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.6252627499506502,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750810,,,train,sda-all,samples/GSE332563/GSM9750810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9750811,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.97035170239624,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750811,,,train,sda-all,samples/GSE332563/GSM9750811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9750812,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4896,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.8135505361115487,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750812,,,train,sda-all,samples/GSE332563/GSM9750812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9750813,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4867,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.7711022845700004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750813,,,train,sda-all,samples/GSE332563/GSM9750813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750814,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4979,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.706672018808113,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750814,,,train,sda-all,samples/GSE332563/GSM9750814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9750815,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4873,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.615600693053306,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750815,,,train,sda-all,samples/GSE332563/GSM9750815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750816,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.724458805458826,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750816,,,train,sda-all,samples/GSE332563/GSM9750816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750817,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4663,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.832474551830448,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750817,,,train,sda-all,samples/GSE332563/GSM9750817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9750818,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4948,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.6995327545977954,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750818,,,train,sda-all,samples/GSE332563/GSM9750818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750819,GSE332563,GSE332563,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,spleen,luna,UBERON:0002106,spleen,Spleen,primary tissue,MONDO:0044903,myelofibrosis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4905,18085,counts,um,1.0,verified,True,H&E-like (heuristic),3.557224983352789,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750819,,,train,sda-all,samples/GSE332563/GSM9750819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9751331,GSE332601,GSE332601,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001115,left lobe of liver,Liver (left lobe),primary tissue,,,perturbation,luna,,NDMA (3.5 mg/kg i.p. day 8 + 7 mg/kg i.p. day 15),adult,luna,adult,,male,sample text,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2407,32285,counts,um,1.0,verified,True,H&E,4.07031108249757,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751331,,,train,sda-all,samples/GSE332601/GSM9751331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9751332,GSE332601,GSE332601,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001115,left lobe of liver,Liver (left lobe),primary tissue,,,perturbation,luna,,Saline vehicle (i.p. at postnatal days 8 and 15),adult,luna,adult,,male,sample text,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3613,32285,counts,um,1.0,verified,True,H&E,3.955418991319632,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751332,,,train,sda-all,samples/GSE332601/GSM9751332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9751333,GSE332601,GSE332601,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001115,left lobe of liver,Liver (left lobe),primary tissue,,,perturbation,luna,,NDMA (3.5 mg/kg i.p. day 8 + 7 mg/kg i.p. day 15),adult,luna,adult,,male,sample text,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3554,32285,counts,um,1.0,verified,True,H&E,4.003623006121493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751333,,,train,sda-all,samples/GSE332601/GSM9751333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM9751334,GSE332601,GSE332601,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0001115,left lobe of liver,Liver (left lobe),primary tissue,,,perturbation,luna,,Saline vehicle (i.p. at postnatal days 8 and 15),adult,luna,adult,,male,sample text,,,,fresh frozen,OCT-embedded,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3906,32285,counts,um,1.0,verified,True,H&E,4.020202073927256,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751334,,,train,sda-all,samples/GSE332601/GSM9751334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9846517,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,188119,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.663712789685634,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846517,,,val,sda-all,samples/GSE332618/GSM9846517,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846518,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,108221,18132,counts,um,1.0,verified,True,H&E-like (heuristic),1.6761677737620706,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846518,,,val,sda-all,samples/GSE332618/GSM9846518,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846519,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,266507,18132,counts,um,1.0,verified,True,H&E-like (heuristic),1.8598496651122227,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846519,,,val,sda-all,samples/GSE332618/GSM9846519,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846520,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,73627,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.676929365369501,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846520,,,val,sda-all,samples/GSE332618/GSM9846520,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846521,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,85543,18132,counts,um,1.0,verified,True,H&E-like (heuristic),1.5214054735864622,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846521,,,val,sda-all,samples/GSE332618/GSM9846521,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846522,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,243956,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.664238507219088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846522,,,val,sda-all,samples/GSE332618/GSM9846522,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846523,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,157107,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.6660894277122384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846523,,,val,sda-all,samples/GSE332618/GSM9846523,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846524,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,157580,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.6769972865118215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846524,,,val,sda-all,samples/GSE332618/GSM9846524,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846525,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,145659,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.666221938402553,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846525,,,val,sda-all,samples/GSE332618/GSM9846525,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846526,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,166724,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.666343716664983,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846526,,,val,sda-all,samples/GSE332618/GSM9846526,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846527,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,255196,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.674941724910843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846527,,,val,sda-all,samples/GSE332618/GSM9846527,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846528,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,138481,18132,counts,um,1.0,verified,True,H&E-like (heuristic),1.769633084534206,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846528,,,val,sda-all,samples/GSE332618/GSM9846528,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846529,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,Tumor,xenograft,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,216925,18132,counts,um,1.0,verified,True,H&E-like (heuristic),1.859191655758768,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846529,,,val,sda-all,samples/GSE332618/GSM9846529,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846530,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,54700,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.67720421977008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846530,,,val,sda-all,samples/GSE332618/GSM9846530,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846531,GSE332618,GSE332618,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,Tumor,tumour tissue,MONDO:0004992;MONDO:0005072,cancer;neuroblastoma,disease,luna,NBL,,not stated,luna,not stated,,unknown,not stated,,,,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,77363,18132,counts,um,1.0,verified,True,H&E-like (heuristic),4.674935065970432,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846531,,,val,sda-all,samples/GSE332618/GSM9846531,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9752692,GSE332731,GSE332731,Local control of Cre-regulated genetic modeling in vivo using wireless implantable optoelectronics [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Mouse Lung,primary tissue,,,disease,luna,,E-LightR-Cre + local optoelectronic illumination,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium HD,,,bin,350126,19059,counts,um,1.0,verified,True,H&E,2.088215038292686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9752692,,,train,sda-all,samples/GSE332731/GSM9752692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9752693,GSE332731,GSE332731,Local control of Cre-regulated genetic modeling in vivo using wireless implantable optoelectronics [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Mouse Lung,primary tissue,,,disease,luna,,E-LightR-Cre + local optoelectronic illumination,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,visium HD,,,bin,347278,19059,counts,um,1.0,verified,True,H&E,1.6642344059201735,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9752693,,,train,sda-all,samples/GSE332731/GSM9752693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9754317,GSE332850,GSE332850,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Primary or metastatic lesions of hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16977,10029,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9754317,,,train,sda-all,samples/GSE332850/GSM9754317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9754325,GSE332850,GSE332850,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Primary or metastatic lesions of hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,4436,10029,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9754325,,,train,sda-all,samples/GSE332850/GSM9754325,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9754328,GSE332850,GSE332850,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Primary or metastatic lesions of hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24966,10029,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9754328,,,train,sda-all,samples/GSE332850/GSM9754328,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9754329,GSE332850,GSE332850,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Primary or metastatic lesions of hepatocellular carcinoma,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,9756,10029,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9754329,,,train,sda-all,samples/GSE332850/GSM9754329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759690,GSE333244,GSE333244,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,,,normal,luna,Control,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,198623,18085,unknown,pixel,,unresolved,True,H&E-like (heuristic),,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759690,,,train,sda-all,samples/GSE333244/GSM9759690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759691,GSE333244,GSE333244,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,MONDO:0002866;MONDO:0005130,duodenal disorder;celiac disease,disease,luna,Celiac disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,156800,18085,unknown,pixel,,unresolved,True,H&E-like (heuristic),,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759691,,,train,sda-all,samples/GSE333244/GSM9759691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759692,GSE333244,GSE333244,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,MONDO:0002866;MONDO:0005130,duodenal disorder;celiac disease,disease,luna,Celiac disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,112895,18085,unknown,pixel,,unresolved,True,H&E-like (heuristic),,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759692,,,train,sda-all,samples/GSE333244/GSM9759692,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759693,GSE333244,GSE333244,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,small intestine,luna,UBERON:0002114,duodenum,Duodenum,primary tissue,MONDO:0002866;MONDO:0005130,duodenal disorder;celiac disease,disease,luna,Celiac disease,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,50317,18085,unknown,pixel,,unresolved,True,H&E-like (heuristic),,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759693,,,train,sda-all,samples/GSE333244/GSM9759693,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9762113,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2281,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9473143798751402,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762113,,,val,sda-all,samples/GSE333401/GSM9762113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM9762114,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1372,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.92341276939329,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762114,,,val,sda-all,samples/GSE333401/GSM9762114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9762115,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1624,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.952356475954416,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762115,,,val,sda-all,samples/GSE333401/GSM9762115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM9762116,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2087,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9296154749879793,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762116,,,val,sda-all,samples/GSE333401/GSM9762116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM9762117,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1237,32285,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),3.973283754618098,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762117,,,val,sda-all,samples/GSE333401/GSM9762117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM9762118,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,859,32285,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),3.9695357640142688,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762118,,,val,sda-all,samples/GSE333401/GSM9762118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.65}",disease_status,low_confidence_annotation
GSM9762119,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,CT,fetal,luna,fetal,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1861,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9354338109182554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762119,,,val,sda-all,samples/GSE333401/GSM9762119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9762120,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,DBP,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2080,32285,counts,um,1.0,verified,True,H&E-like (heuristic),4.03599210848384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762120,,,val,sda-all,samples/GSE333401/GSM9762120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 0.81}",,
GSM9762121,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,DBP,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1961,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9037917573085226,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762121,,,val,sda-all,samples/GSE333401/GSM9762121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.73}",,
GSM9762122,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,DBP,fetal,luna,fetal,,female,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1365,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9620576390709923,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762122,,,val,sda-all,samples/GSE333401/GSM9762122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM9762123,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,DBP,fetal,luna,fetal,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1598,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.937800569746858,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762123,,,val,sda-all,samples/GSE333401/GSM9762123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM9762124,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,DBP,fetal,luna,fetal,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1587,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.9240241273675784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762124,,,val,sda-all,samples/GSE333401/GSM9762124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM9762125,GSE333401,GSE333401,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,DBP,fetal,luna,fetal,,male,sample text,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2411,32285,counts,um,1.0,verified,True,H&E-like (heuristic),3.942943303187447,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762125,,,val,sda-all,samples/GSE333401/GSM9762125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM9765770,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0000059,large intestine,large intestine,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,28685,27275,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765770,,,train,sda-all,samples/GSE333479/GSM9765770,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9765771,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0000059,large intestine,large intestine,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,29310,24869,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765771,,,train,sda-all,samples/GSE333479/GSM9765771,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9765772,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,108434,24836,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765772,,,train,sda-all,samples/GSE333479/GSM9765772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765773,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,106238,25082,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765773,,,train,sda-all,samples/GSE333479/GSM9765773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765774,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,113170,24848,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765774,,,train,sda-all,samples/GSE333479/GSM9765774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765775,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,156908,27076,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765775,,,train,sda-all,samples/GSE333479/GSM9765775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765776,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,66851,25552,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765776,,,train,sda-all,samples/GSE333479/GSM9765776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765777,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,23806,25284,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765777,,,train,sda-all,samples/GSE333479/GSM9765777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9765778,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,24885,24698,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765778,,,train,sda-all,samples/GSE333479/GSM9765778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9765779,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,24315,24233,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765779,,,train,sda-all,samples/GSE333479/GSM9765779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9765780,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,20196,25956,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765780,,,train,sda-all,samples/GSE333479/GSM9765780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9765781,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,thymus,luna,UBERON:0002370,thymus,thymus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,17760,23332,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765781,,,train,sda-all,samples/GSE333479/GSM9765781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765782,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,16053,28010,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765782,,,train,sda-all,samples/GSE333479/GSM9765782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9765783,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,spleen,luna,UBERON:0002106,spleen,spleen,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,12667,26158,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765783,,,train,sda-all,samples/GSE333479/GSM9765783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9765784,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,110554,28490,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765784,,,train,sda-all,samples/GSE333479/GSM9765784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765785,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,12941,27133,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765785,,,train,sda-all,samples/GSE333479/GSM9765785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765786,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uterus,luna,UBERON:0000995,uterus,uterus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,13325,25106,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765786,,,train,sda-all,samples/GSE333479/GSM9765786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765787,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,testis,luna,UBERON:0000473,testis,testis,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,148070,27526,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765787,,,train,sda-all,samples/GSE333479/GSM9765787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765788,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,testis,luna,UBERON:0000473,testis,testis,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,140228,26840,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765788,,,train,sda-all,samples/GSE333479/GSM9765788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9765789,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,51698,27378,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765789,,,train,sda-all,samples/GSE333479/GSM9765789,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765790,GSE333479,GSE333479,A unified spatial transcriptome profiling of ten mouse organs,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,46599,24674,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,42374103,,GSM9765790,,,train,sda-all,samples/GSE333479/GSM9765790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9767741,GSE333529,GSE333529,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0007915,systemic lupus erythematosus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,769,18085,counts,um,1.0,verified,True,H&E,4.42566673798747,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767741,,,train,sda-all,samples/GSE333529/GSM9767741,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9767742,GSE333529,GSE333529,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0007915,systemic lupus erythematosus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,955,18085,counts,um,1.0,verified,True,H&E,3.2647170106598553,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767742,,,train,sda-all,samples/GSE333529/GSM9767742,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9767743,GSE333529,GSE333529,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0007915,systemic lupus erythematosus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,900,18085,counts,um,1.0,verified,True,H&E,4.075396827384211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767743,,,train,sda-all,samples/GSE333529/GSM9767743,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9767744,GSE333529,GSE333529,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0007915,systemic lupus erythematosus,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,830,18085,counts,um,1.0,verified,True,H&E,5.80898419011643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767744,,,train,sda-all,samples/GSE333529/GSM9767744,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9769919,GSE333617,GSE333617,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018229,Stevens-Johnson syndrome,disease,luna,SJS/TEN,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2296,18085,counts,um,1.0,verified,True,H&E-like (heuristic),6.996819919949294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769919,,,train,sda-all,samples/GSE333617/GSM9769919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9769920,GSE333617,GSE333617,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018229,Stevens-Johnson syndrome,disease,luna,SJS/TEN,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2516,18085,counts,um,1.0,verified,True,H&E-like (heuristic),5.109669939378263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769920,,,train,sda-all,samples/GSE333617/GSM9769920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM9769921,GSE333617,GSE333617,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,MONDO:0018229,Stevens-Johnson syndrome,disease,luna,HD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2082,17943,counts,um,1.0,verified,True,H&E-like (heuristic),4.086611054520036,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769921,,,train,sda-all,samples/GSE333617/GSM9769921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9769922,GSE333617,GSE333617,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,skin,primary tissue,,,normal,manual,HD,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3862,18085,counts,um,1.0,verified,True,H&E-like (heuristic),10.731588419458864,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769922,,,train,sda-all,samples/GSE333617/GSM9769922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,normal_but_disease_text;low_confidence_annotation
GSM9457959,GSE333685,GSE333685,Vascular smooth muscle cell state trajectories mediate molecular mechanisms of coronary disease risk,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0000947,aorta,Aorta,primary tissue,MONDO:0005010,coronary artery disorder,disease,luna,,"ApoE-/-, Rosa26-Tdt+/+",not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,49909,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.499999059938332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41844614,,GSM9457959,,,train,sda-all,samples/GSE333685/GSM9457959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9770943,GSE333693,GSE333693,Rat thymic epithelium-free areas are specialized medullary niches enriched for mature thymocytes and distinct stromal subsets,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,thymus,luna,UBERON:0002370,thymus,Thymus,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,796801,38507,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9770943,,,train,sda-all,samples/GSE333693/GSM9770943,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771950,GSE333735,GSE333735,TGFbeta determines epithelial tissue spacing by regulating mesenchymal condensation,Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,,lung,luna,UBERON:0002048,lung,Embryonic lung,primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1018,16128,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42446999,,GSM9771950,,,train,sda-all,samples/GSE333735/GSM9771950,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9771951,GSE333735,GSE333735,TGFbeta determines epithelial tissue spacing by regulating mesenchymal condensation,Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,,lung,luna,UBERON:0002048,lung,Embryonic lung,primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1091,15916,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42446999,,GSM9771951,,,train,sda-all,samples/GSE333735/GSM9771951,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771952,GSE333735,GSE333735,TGFbeta determines epithelial tissue spacing by regulating mesenchymal condensation,Gallus gallus,9031,chicken,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,,lung,luna,UBERON:0002048,lung,Embryonic lung,primary tissue,,,normal,luna,,WT,embryonic,luna,embryonic,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,1421,20128,unknown,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42446999,,GSM9771952,,,train,sda-all,samples/GSE333735/GSM9771952,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9771965,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,aged,age rule: bare number read as years,aged,73,female,extracted field,Female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,547317,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771965,,,train,sda-all,samples/GSE333737/GSM9771965,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771966,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,aged,age rule: bare number read as years,aged,75,male,extracted field,Male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,634912,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771966,,,train,sda-all,samples/GSE333737/GSM9771966,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9771967,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,adult,age rule: bare number read as years,adult,41,female,extracted field,Female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,426366,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771967,,,train,sda-all,samples/GSE333737/GSM9771967,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9771968,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,adult,age rule: bare number read as years,adult,46,male,extracted field,Male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,649019,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771968,,,train,sda-all,samples/GSE333737/GSM9771968,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771969,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,aged,age rule: bare number read as years,aged,70,male,extracted field,Male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,502612,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771969,,,train,sda-all,samples/GSE333737/GSM9771969,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771970,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,adult,age rule: bare number read as years,adult,46,male,extracted field,Male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,407956,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771970,,,train,sda-all,samples/GSE333737/GSM9771970,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771971,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,,,normal,luna,non-diabetic,,adult,age rule: bare number read as years,adult,48,female,extracted field,Female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,102744,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771971,,,train,sda-all,samples/GSE333737/GSM9771971,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771972,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetic,,aged,age rule: bare number read as years,aged,74,female,extracted field,Female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,2686,278,counts,unstated,,unresolved,False,,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,,,GSM9771972,,,train,sda-all,samples/GSE333737/GSM9771972,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771973,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetic,,aged,age rule: bare number read as years,aged,69,male,extracted field,Male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,269536,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771973,,,train,sda-all,samples/GSE333737/GSM9771973,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771974,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetic,,aged,age rule: bare number read as years,aged,71,male,extracted field,Male,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,207477,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771974,,,train,sda-all,samples/GSE333737/GSM9771974,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771975,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetic,,aged,age rule: bare number read as years,aged,69,female,extracted field,Female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,514236,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771975,,,train,sda-all,samples/GSE333737/GSM9771975,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771976,GSE333737,GSE333737,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,pancreas,luna,UBERON:0001264,pancreas,pancreas,primary tissue,MONDO:0005015,diabetes mellitus,disease,luna,type 2 diabetic,,adult,age rule: bare number read as years,adult,58,female,extracted field,Female,,,FFPE,FFPE,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERSCOPE,,,cell,217547,300,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9771976,,,train,sda-all,samples/GSE333737/GSM9771976,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9775942,GSE333851,GSE333851,Spatial Glyco-Codes Define Human Liver Pathology and Progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,tumour tissue,MONDO:0007256,hepatocellular carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,other,2498,89292,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,42465518,,GSM9775942,,,train,sda-all,samples/GSE333851/GSM9775942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779857,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3698,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.018676815297874,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779857,,,train,sda-all,samples/GSE334067/GSM9779857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779858,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3695,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.976169419837443,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779858,,,train,sda-all,samples/GSE334067/GSM9779858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.07, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779859,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3483,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.015891289672782,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779859,,,train,sda-all,samples/GSE334067/GSM9779859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779860,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4501,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.035142484072326,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779860,,,train,sda-all,samples/GSE334067/GSM9779860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779861,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3973,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.036074575308314,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779861,,,train,sda-all,samples/GSE334067/GSM9779861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9779862,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2429,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.062490337083031,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779862,,,train,sda-all,samples/GSE334067/GSM9779862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779863,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1808,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.974085452932125,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779863,,,train,sda-all,samples/GSE334067/GSM9779863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.15, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779864,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS+ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4083,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.015424221763897,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779864,,,train,sda-all,samples/GSE334067/GSM9779864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779865,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS+ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3208,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.019654833404229,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779865,,,train,sda-all,samples/GSE334067/GSM9779865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779866,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS+ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3356,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.037287126870245,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779866,,,train,sda-all,samples/GSE334067/GSM9779866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779867,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS+ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2308,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.971440141613673,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779867,,,train,sda-all,samples/GSE334067/GSM9779867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779868,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS+ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2576,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.015796822161719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779868,,,train,sda-all,samples/GSE334067/GSM9779868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779869,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,DSS+ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3844,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.715637147472562,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779869,,,train,sda-all,samples/GSE334067/GSM9779869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779870,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4773,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.032808379516701,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779870,,,train,sda-all,samples/GSE334067/GSM9779870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779871,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7235,19465,counts,um,1.0,verified,True,H&E-like (heuristic),8.026957453758472,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779871,,,train,sda-all,samples/GSE334067/GSM9779871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779872,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4953,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.974850920162445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779872,,,train,sda-all,samples/GSE334067/GSM9779872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779873,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7626,19465,counts,um,1.0,verified,True,other bright-field stain (heuristic),6.9634271962971415,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779873,,,train,sda-all,samples/GSE334067/GSM9779873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779874,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5171,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.03156968739959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779874,,,train,sda-all,samples/GSE334067/GSM9779874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779875,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8024,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.9683243095217815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779875,,,train,sda-all,samples/GSE334067/GSM9779875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779876,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8557,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.023051130563352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779876,,,train,sda-all,samples/GSE334067/GSM9779876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.13, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779877,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6531,19465,counts,um,1.0,verified,True,H&E-like (heuristic),6.971961900399629,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779877,,,train,sda-all,samples/GSE334067/GSM9779877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779878,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5855,19465,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),7.0330895461731355,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779878,,,train,sda-all,samples/GSE334067/GSM9779878,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779879,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7148,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.028094575486524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779879,,,train,sda-all,samples/GSE334067/GSM9779879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779880,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9695,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.088065144280274,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779880,,,train,sda-all,samples/GSE334067/GSM9779880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779881,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10078,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.0181119307671445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779881,,,train,sda-all,samples/GSE334067/GSM9779881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779882,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5731,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.017488493579154,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779882,,,train,sda-all,samples/GSE334067/GSM9779882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779883,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7147,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.019405141497354,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779883,,,train,sda-all,samples/GSE334067/GSM9779883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779884,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7620,19465,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),7.0271650582488405,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779884,,,train,sda-all,samples/GSE334067/GSM9779884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779885,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9138,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.063406526494643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779885,,,train,sda-all,samples/GSE334067/GSM9779885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779886,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3809,19465,counts,um,1.0,verified,True,fluorescence: magenta (heuristic),7.066281470503457,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779886,,,train,sda-all,samples/GSE334067/GSM9779886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779887,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,mondo_predicate (Luna: perturbation),,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5806,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.032758504654986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779887,,,train,sda-all,samples/GSE334067/GSM9779887,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779888,GSE334067,GSE334067,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,colon,luna,UBERON:0001155,colon,Colon,primary tissue,MONDO:0005292,colitis,disease,luna,,ENU,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4469,19465,counts,um,1.0,verified,True,H&E-like (heuristic),7.065070088416563,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779888,,,train,sda-all,samples/GSE334067/GSM9779888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9785209,GSE334308,GSE334308,Mapping vascular plasticity in liver fibrogenesis identifies novel fibrosis-associated endothelial cells in early-stage liver disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005154,liver disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,212200,18085,counts,um,1.0,verified,True,H&E-like (heuristic),0.5000095142866608,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785209,,,train,sda-all,samples/GSE334308/GSM9785209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9785210,GSE334308,GSE334308,Mapping vascular plasticity in liver fibrogenesis identifies novel fibrosis-associated endothelial cells in early-stage liver disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver biopsy,primary tissue,MONDO:0005154,liver disorder,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,141677,18085,counts,um,1.0,verified,True,H&E-like (heuristic),0.4999956006760627,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785210,,,train,sda-all,samples/GSE334308/GSM9785210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9785428,GSE334323,GSE334323,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal/Benign,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18408,counts,um,1.0,verified,True,H&E-like (heuristic),7.293785982138234,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785428,,,train,sda-all,samples/GSE334323/GSM9785428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9785429,GSE334323,GSE334323,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,"Colorectal Cancer, Adenocarcinoma",tumour tissue,MONDO:0004970;MONDO:0024331,adenocarcinoma;colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4682,18408,counts,um,1.0,verified,True,H&E-like (heuristic),8.479695882761236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785429,,,train,sda-all,samples/GSE334323/GSM9785429,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM9785430,GSE334323,GSE334323,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal/Benign,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3689,18408,counts,um,1.0,verified,True,H&E-like (heuristic),8.04481860338564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785430,,,train,sda-all,samples/GSE334323/GSM9785430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9785431,GSE334323,GSE334323,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,"Colorectal Cancer, Adenocarcinoma",tumour tissue,MONDO:0004970;MONDO:0024331,adenocarcinoma;colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3909,18408,counts,um,1.0,verified,True,H&E-like (heuristic),10.35009512279665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785431,,,train,sda-all,samples/GSE334323/GSM9785431,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.98}",,
GSM9785432,GSE334323,GSE334323,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,Colon Normal/Benign,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3565,18408,counts,um,1.0,verified,True,H&E-like (heuristic),13.3485423472719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785432,,,train,sda-all,samples/GSE334323/GSM9785432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9785433,GSE334323,GSE334323,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,colon,luna,UBERON:0001155,colon,"Colorectal Cancer, Adenocarcinoma",tumour tissue,MONDO:0004970;MONDO:0024331,adenocarcinoma;colorectal carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4898,18408,counts,um,1.0,verified,True,fluorescence: red (heuristic),12.054013948222906,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785433,,,train,sda-all,samples/GSE334323/GSM9785433,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9786073,GSE334364,GSE334364,Spatial Transcriptomic Atlas Reveals that FOXO3-Mediated Mitochondrial Dynamics Imbalance Drives Premature Ovarian Insufficiency in Mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,ovary,luna,UBERON:0000992,ovary,ovary,primary tissue,MONDO:0001889,ovarian dysfunction,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,544026,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048249241797,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42435003,,GSM9786073,,,test,sda-all,samples/GSE334364/GSM9786073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9788638,GSE334433,GSE334433,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002386,forelimb zeugopod,Regenerating limb amputated in dyaphisis region,primary tissue,,,perturbation,luna,,Lower arm amputation in the diaphysis region of the radius and ulna,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1134,139698,counts,um,1.0,verified,True,H&E-like (heuristic),4.104547224689206,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788638,,,train,sda-all,samples/GSE334433/GSM9788638,sda-tissue-disease-2.4,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 0.63}",organ,low_confidence_annotation
GSM9788639,GSE334433,GSE334433,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002386,forelimb zeugopod,Regenerating limb amputated in dyaphisis region,primary tissue,,,perturbation,luna,,Lower arm amputation in the diaphysis region of the radius and ulna,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,886,139698,counts,um,1.0,verified,True,H&E-like (heuristic),4.1062082628043,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788639,,,train,sda-all,samples/GSE334433/GSM9788639,sda-tissue-disease-2.4,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.67, ""life_stage"": 0.8200000000000001}",,
GSM9788640,GSE334433,GSE334433,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0001437,epiphysis,Regenerating limb amputated in epiphysis region,primary tissue,,,perturbation,luna,,Lower arm amputation in the epiphysis region of the radius and ulna,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1243,139698,counts,um,1.0,verified,True,H&E-like (heuristic),4.104711871206297,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788640,,,train,sda-all,samples/GSE334433/GSM9788640,sda-tissue-disease-2.4,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.34, ""life_stage"": 0.91}",organ;uberon,low_confidence_annotation
GSM9788641,GSE334433,GSE334433,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002386,forelimb zeugopod,Regenerating limb amputated in epiphysis region,primary tissue,,,perturbation,luna,,Lower arm amputation in the epiphysis region of the radius and ulna,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1369,139698,counts,um,1.0,verified,True,H&E-like (heuristic),4.106416764096489,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788641,,,train,sda-all,samples/GSE334433/GSM9788641,sda-tissue-disease-2.4,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.55, ""life_stage"": 0.72}",organ;uberon,low_confidence_annotation
GSM9788642,GSE334433,GSE334433,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002386,forelimb zeugopod,Regenerating limb amputated in dyaphisis region,primary tissue,,,perturbation,luna,,Lower arm amputation in the diaphysis region of the radius and ulna,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1103,139698,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.521269363793237,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788642,,,train,sda-all,samples/GSE334433/GSM9788642,sda-tissue-disease-2.4,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.79, ""life_stage"": 0.86}",,
GSM9788644,GSE334433,GSE334433,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],Ambystoma mexicanum,8296,axolotl,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,other,luna,UBERON:0002386,forelimb zeugopod,Regenerating limb amputated in epiphysis region,primary tissue,,,perturbation,luna,,Lower arm amputation in the epiphysis region of the radius and ulna,adult,luna,adult,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1374,139698,counts,um,1.0,verified,True,H&E-like (heuristic),4.523786486041112,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788644,,,train,sda-all,samples/GSE334433/GSM9788644,sda-tissue-disease-2.4,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.32, ""life_stage"": 0.73}",organ;uberon,low_confidence_annotation
GSM9802211,GSE334924,GSE334924,Matched single-cell and Visium HD spatial transcriptomics of a chronic antibody-mediated rejection kidney graft,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Renal biopsy tissue,primary tissue,,,disease,luna,CAMR,,adult,age rule: bare number read as years,adult,40,male,extracted field,M,GSE334924:CAMR-ZLD,CAMR-ZLD,,,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,205569,18132,counts,um,1.0,verified,True,H&E-like (heuristic),2.0909659348816305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802211,,,train,sda-all,samples/GSE334924/GSM9802211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9802652,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate,,,adult,luna,adult,25.9,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7474,19465,counts,um,1.0,verified,True,H&E,4.638208571249358,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802652,,,test,sda-all,samples/GSE334959/GSM9802652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.88, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9802653,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate,,,adult,luna,adult,25,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7236,19465,counts,um,1.0,verified,True,H&E,4.667530106842719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802653,,,test,sda-all,samples/GSE334959/GSM9802653,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM9802654,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,,,normal,luna,,,adult,luna,adult,29,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7082,19465,counts,um,1.0,verified,True,H&E,4.6405082483668005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802654,,,test,sda-all,samples/GSE334959/GSM9802654,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9802655,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate (Luna: perturbation),,,adult,luna,adult,25.9,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7119,19465,counts,um,1.0,verified,True,H&E,4.6663695492187705,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802655,,,test,sda-all,samples/GSE334959/GSM9802655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.91, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9802656,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,luna,,,adult,luna,adult,25.7,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7402,19465,counts,um,1.0,verified,True,H&E,4.639851243519577,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802656,,,test,sda-all,samples/GSE334959/GSM9802656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM9802657,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,luna,,,adult,luna,adult,29,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7210,19465,counts,um,1.0,verified,True,H&E,4.666866951862361,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802657,,,test,sda-all,samples/GSE334959/GSM9802657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.89, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9802658,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate (Luna: perturbation),,,adult,luna,adult,29.14,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7882,19465,counts,um,1.0,verified,True,H&E,4.667357369767179,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802658,,,test,sda-all,samples/GSE334959/GSM9802658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.92, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9802659,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate (Luna: perturbation),,,adult,luna,adult,29.14,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6935,19465,counts,um,1.0,verified,True,H&E,4.640340183121012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802659,,,test,sda-all,samples/GSE334959/GSM9802659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.89, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9802660,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate (Luna: perturbation),,,adult,luna,adult,24,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6477,19465,counts,um,1.0,verified,True,H&E,4.666607157480876,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802660,,,test,sda-all,samples/GSE334959/GSM9802660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.9500000000000001, ""life_stage"": 0.9500000000000001}",,
GSM9802661,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,,,normal,manual,,,adult,luna,adult,29,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3480,19465,counts,um,1.0,verified,True,H&E,7.006074446876273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802661,,,test,sda-all,samples/GSE334959/GSM9802661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.96, ""life_stage"": 0.97}",,
GSM9802662,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate,,,adult,luna,adult,29,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3822,19465,counts,um,1.0,verified,True,H&E,6.948191927901177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802662,,,test,sda-all,samples/GSE334959/GSM9802662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.92, ""life_stage"": 0.9400000000000001}",,
GSM9802663,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,mondo_predicate (Luna: perturbation),,,adult,luna,adult,29.4,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3565,19465,counts,um,1.0,verified,True,H&E,6.997402894255731,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802663,,,test,sda-all,samples/GSE334959/GSM9802663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9802664,GSE334959+GSE334960,GSE334959,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0002037,cerebellum,Brain,primary tissue,MONDO:0005149,pulmonary hypertension,disease,luna,,,adult,luna,adult,29.4,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3481,19465,counts,um,1.0,verified,True,H&E,6.951419263808623,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802664,,,test,sda-all,samples/GSE334959/GSM9802664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9805851,GSE335102,GSE335102,Spatial transcriptomic analysis of Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state and bacterial localization,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,MONDO:0007024,Yersinia pseudotuberculosis infectious disease,disease,luna,,C57BL6,adult,age rule: age with unit,juvenile,7.5 weeks,female,extracted field,female,,,FFPE,FFPE,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereoseq,,,bin,34961,56513,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9805851,,,train,sda-all,samples/GSE335102/GSM9805851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9806289,GSE335126,GSE335126,10x Genomics Xenium analysis of adult and aged mouse brain control and heat stress cohorts,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,"control and periodic heat exposure (~40 deg C, 3 hours/day for 14-15 days)",aged,luna,aged,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,228762,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.50001148286032,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9806289,,,train,sda-all,samples/GSE335126/GSM9806289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",disease_status;life_stage,low_confidence_annotation
GSM9806290,GSE335126,GSE335126,10x Genomics Xenium analysis of adult and aged mouse brain control and heat stress cohorts,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,"control and periodic heat exposure (~40 deg C, 3 hours/day for 14-15 days)",aged,luna,aged,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,211018,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9806290,,,train,sda-all,samples/GSE335126/GSM9806290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9807708,GSE335181,GSE335181,Spatial transcriptomic analysis of patient- and cell line-derived high grade serous ovarian cancer spheroids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,,,,organoid,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4674,18132,counts,um,1.0,verified,True,H&E-like (heuristic),3.4197314326207064,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9807708,,,train,sda-all,samples/GSE335181/GSM9807708,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9807709,GSE335181,GSE335181,Spatial transcriptomic analysis of patient- and cell line-derived high grade serous ovarian cancer spheroids,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peritoneum,luna,UBERON:0007795,ascitic fluid,"Ascites Derived Patient High Grade Serous Ovarian Cancer (ID's 526, 530, 498) microarray",organoid,MONDO:0008170,ovarian cancer,disease,luna,,,not stated,rule: culture or organoid (culture time is not a life stage),not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4963,18132,counts,um,1.0,verified,True,H&E-like (heuristic),3.025470642610841,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9807709,,,train,sda-all,samples/GSE335181/GSM9807709,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 0.76, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.99}",organ;uberon,low_confidence_annotation
GSM9808287,GSE335211,GSE335211,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,Kras (LSL-G12D) control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,371513,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000079083122445,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808287,,,train,sda-all,samples/GSE335211/GSM9808287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9808288,GSE335211,GSE335211,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,Kras (LSL-G12D) + H3K36M,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,306612,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999890799576992,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808288,,,train,sda-all,samples/GSE335211/GSM9808288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9808289,GSE335211,GSE335211,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,Kras (LSL-G12D) + Setd2 KO,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,179948,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999353169469596,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808289,,,train,sda-all,samples/GSE335211/GSM9808289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9808290,GSE335211,GSE335211,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008903,lung cancer,disease,luna,,Kras (LSL-G12D) + H3K36M + Setd2 KO,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,485208,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998770576664253,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808290,,,train,sda-all,samples/GSE335211/GSM9808290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9809293,GSE335275,GSE335275,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,Glioblastoma,,aged,age rule: bare number read as years,aged,66,female,extracted field,female,GSE335275:B189,B189,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,52234,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034495446601,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809293,,,test,sda-all,samples/GSE335275/GSM9809293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9809294,GSE335275,GSE335275,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,Glioblastoma,,aged,age rule: bare number read as years,aged,66,female,extracted field,female,GSE335275:B189,B189,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,185662,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999574001947417,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809294,,,test,sda-all,samples/GSE335275/GSM9809294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9809295,GSE335275,GSE335275,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,Glioblastoma,,aged,age rule: bare number read as years,aged,71,male,extracted field,Male,GSE335275:WU1220,WU1220,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56669,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103528242504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809295,,,test,sda-all,samples/GSE335275/GSM9809295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9809296,GSE335275,GSE335275,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,Glioblastoma,,aged,age rule: bare number read as years,aged,71,male,extracted field,Male,GSE335275:WU1220,WU1220,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,296613,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000015904319612,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809296,,,test,sda-all,samples/GSE335275/GSM9809296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9809297,GSE335275,GSE335275,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,Glioblastoma,,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE335275:WU1221,WU1221,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20859,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999173143707626,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809297,,,test,sda-all,samples/GSE335275/GSM9809297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9809298,GSE335275,GSE335275,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Brain tumor,tumour tissue,MONDO:0850335;MONDO:0021211,IDH-wildtype glioblastoma;brain neoplasm,disease,luna,Glioblastoma,,aged,age rule: bare number read as years,aged,68,female,extracted field,female,GSE335275:WU1221,WU1221,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,103688,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998871841155235,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809298,,,test,sda-all,samples/GSE335275/GSM9809298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9812268,GSE335345,GSE335345,"10X Visium spatial transcriptomics of mouse thoracic spine intervertebral disc, IVD2 (area D1)",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0006073,thoracic region of vertebral column,Thoracic Spine,primary tissue,,,perturbation,luna,,Adgrg6-cKO and Wildtype,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1916,19465,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9812268,,,train,sda-all,samples/GSE335345/GSM9812268,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9815146,GSE335533,GSE335533,Epigenetic reprogramming of CD4⁺ T cell fate by maternal and early-life obesity impairs vaccine responses in the offspring [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0000029,lymph node,draining lymph node,primary tissue,,,perturbation,luna,,NP-OVA + Alum,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1152,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.687298315398718,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9815146,,,train,sda-all,samples/GSE335533/GSM9815146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9815147,GSE335533,GSE335533,Epigenetic reprogramming of CD4⁺ T cell fate by maternal and early-life obesity impairs vaccine responses in the offspring [Spatial Transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lymph node,luna,UBERON:0000029,lymph node,draining lymph node,primary tissue,,,perturbation,luna,,NP-OVA + Alum,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2758,19465,counts,um,1.0,verified,True,H&E-like (heuristic),4.701480240620542,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9815147,,,train,sda-all,samples/GSE335533/GSM9815147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9815454,GSE335552,GSE335552,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,metastasis,MONDO:0005070,neoplasm,disease,luna,,CRLM tumor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,80036,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000061968107081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815454,,,train,sda-all,samples/GSE335552/GSM9815454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9815455,GSE335552,GSE335552,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,metastasis,MONDO:0005070,neoplasm,disease,luna,,CRLM tumor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,166860,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000110809053838,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815455,,,train,sda-all,samples/GSE335552/GSM9815455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9815456,GSE335552,GSE335552,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,metastasis,MONDO:0005070,neoplasm,disease,luna,,CRLM tumor,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,213319,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912459413001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815456,,,train,sda-all,samples/GSE335552/GSM9815456,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9815457,GSE335552,GSE335552,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,Liver,primary tissue,,,normal,luna,,matched adjacent normal liver sample,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,186496,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815457,,,train,sda-all,samples/GSE335552/GSM9815457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9815713,GSE335564,GSE335564,A comparative brain cell atlas of Astyanax mexicanus,Astyanax mexicanus,7994,Mexican tetra,Astyanax mexicanus,7994,,False,False,GEO organism field,Astyanax mexicanus,,brain,luna,UBERON:0000955,brain,Whole brain,primary tissue,,,normal,luna,,Rio Choy surface,not stated,luna,not stated,,female,extracted field,female,,,,,Other,release v3,not named in GEO,sequencing-based,other,,,other,784963,27540,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,42395481,,GSM9815713,,,train,sda-all,samples/GSE335564/GSM9815713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9812615,GSE335592,GSE335592,CAR-T-drug conjugate against solid tumor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005070,neoplasm,disease,mondo_predicate (Luna: perturbation),,CAR-T,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,10000,39763,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9812615,,,val,sda-all,samples/GSE335592/GSM9812615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9812616,GSE335592,GSE335592,CAR-T-drug conjugate against solid tumor,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005070,neoplasm,disease,mondo_predicate (Luna: perturbation),,CAR-T-D-C,not stated,luna,not stated,,unknown,not stated,,,,,,DBiT-seq,GEO series text (assay_final.csv),DBiT-seq,sequencing-based,other,,,spot,10000,44148,unknown,native_grid,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9812616,,,val,sda-all,samples/GSE335592/GSM9812616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9816491,GSE335624,GSE335624,Initial OX40–OX40L Signaling Promotes a Skin-Resident Memory T-Cell Reservoir in Atopic Dermatitis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0004980;MONDO:0021739,atopic eczema;prurigo,disease,luna,,Pretreatment atopic dermatitis lesional skin specimen containing an erythematous lesion and a prurigo nodule,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45280,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048294513743,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42638514,,GSM9816491,,,train,sda-all,samples/GSE335624/GSM9816491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9817881,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,mondo_predicate,,"transgenic, TgNotch3^WT",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2373,19465,counts,um,1.0,verified,True,H&E-like (heuristic),16.366801504538284,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817881,,,train,sda-all,samples/GSE335702/GSM9817881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9817882,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,luna,,"transgenic, TgNotch3^R169C",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2077,19465,counts,um,1.0,verified,True,H&E-like (heuristic),11.906500471350352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817882,,,train,sda-all,samples/GSE335702/GSM9817882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9817883,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0001981,blood vessel,cerebral vessels,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,mondo_predicate (Luna: perturbation),,"transgenic, TgNotch3^WT",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,831,19465,counts,um,1.0,verified,True,other bright-field stain (heuristic),11.929727585747997,VERIFIED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42547848,,GSM9817883,,,train,sda-all,samples/GSE335702/GSM9817883,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.76, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9817884,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0001981,blood vessel,cerebral vessels,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,luna,,"transgenic, TgNotch3^R169C",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,632,19465,counts,um,1.0,verified,True,other bright-field stain (heuristic),11.931448950616248,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817884,,,train,sda-all,samples/GSE335702/GSM9817884,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9817885,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,"transgenic, TgNotch3^WT",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,384475,19059,counts,um,1.0,verified,True,H&E-like (heuristic),0.8957524246479206,FAILED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42547848,,GSM9817885,,,train,sda-all,samples/GSE335702/GSM9817885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9817886,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,mondo_predicate (Luna: perturbation),,"transgenic, TgNotch3^WT (line Tg129/213)",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,217363,19059,counts,um,1.0,verified,True,H&E-like (heuristic),0.8961549734485088,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817886,,,train,sda-all,samples/GSE335702/GSM9817886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9817887,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,luna,,"transgenic, TgNotch3^R169C (line Tg88/148)",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,346469,19059,counts,um,1.0,verified,True,H&E-like (heuristic),1.1914155254906087,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817887,,,train,sda-all,samples/GSE335702/GSM9817887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9817888,GSE335702,GSE335702,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,MONDO:0000914,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",disease,luna,,"transgenic, TgNotch3^R169C (line Tg88)",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,267238,19059,counts,um,1.0,verified,True,H&E-like (heuristic),1.0935744355932078,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817888,,,train,sda-all,samples/GSE335702/GSM9817888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9820697,GSE335777,GSE335777,Resident tissue macrophages transfer selenium transporter protein to protect pancreatic cancer from ferroptosis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,PDAC,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,tamoxifen,not stated,luna,not stated,,unknown,not stated,,,,,,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3600,19465,counts,um,1.0,verified,True,H&E,4.242247094208409,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9820697,,,train,sda-all,samples/GSE335777/GSM9820697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822859,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,Middle Temporal Gyrus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,197723,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999187063970674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822859,,,train,sda-all,samples/GSE335898/GSM9822859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822860,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,Middle Temporal Gyrus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,188921,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000051805120649,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822860,,,train,sda-all,samples/GSE335898/GSM9822860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822861,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,Middle Temporal Gyrus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,145605,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998906285977435,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822861,,,train,sda-all,samples/GSE335898/GSM9822861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822862,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002771,middle temporal gyrus,Middle Temporal Gyrus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,158042,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054808535515,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822862,,,train,sda-all,samples/GSE335898/GSM9822862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822863,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,33445,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999922472606988,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822863,,,train,sda-all,samples/GSE335898/GSM9822863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822864,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29499,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822864,,,train,sda-all,samples/GSE335898/GSM9822864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822865,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,22698,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000163657662624,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822865,,,train,sda-all,samples/GSE335898/GSM9822865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9822866,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26091,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999827705031013,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822866,,,train,sda-all,samples/GSE335898/GSM9822866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9822867,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29783,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999888648511071,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822867,,,train,sda-all,samples/GSE335898/GSM9822867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822868,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,29037,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000163657662624,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822868,,,train,sda-all,samples/GSE335898/GSM9822868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822869,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,124626,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999945244816509,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822869,,,train,sda-all,samples/GSE335898/GSM9822869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822870,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,30958,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822870,,,train,sda-all,samples/GSE335898/GSM9822870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822871,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12719,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000183486238532,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822871,,,train,sda-all,samples/GSE335898/GSM9822871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9822872,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,45812,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000007950642411,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822872,,,train,sda-all,samples/GSE335898/GSM9822872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9822873,GSE335898,GSE335898,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002421,hippocampal formation,Hippocampus,primary tissue,,,normal,luna,,Control,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,110328,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998965973639226,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822873,,,train,sda-all,samples/GSE335898/GSM9822873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9824312,GSE335962,GSE335962,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow biopsy,primary tissue,MONDO:0100542,clonal hematopoiesis,disease,luna,,CHIP,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,61583,9692,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824312,,,train,sda-all,samples/GSE335962/GSM9824312,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9824313,GSE335962,GSE335962,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow biopsy,primary tissue,MONDO:0100542,clonal hematopoiesis,disease,luna,,CHIP,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,40264,9692,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824313,,,train,sda-all,samples/GSE335962/GSM9824313,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9824314,GSE335962,GSE335962,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow biopsy,primary tissue,,,disease,luna,,Non-CHIP,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23992,9692,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824314,,,train,sda-all,samples/GSE335962/GSM9824314,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824315,GSE335962,GSE335962,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow biopsy,primary tissue,,,normal,luna,,Non-CHIP,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,51464,9692,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824315,,,train,sda-all,samples/GSE335962/GSM9824315,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824316,GSE335962,GSE335962,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow biopsy,primary tissue,,,normal,luna,,Non-CHIP,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,35084,9692,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824316,,,train,sda-all,samples/GSE335962/GSM9824316,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824317,GSE335962,GSE335962,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow biopsy,primary tissue,,,normal,luna,,Non-CHIP,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,69901,9692,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824317,,,train,sda-all,samples/GSE335962/GSM9824317,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829813,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,normal,luna,,RT/saline,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,83912,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500005977741066,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829813,,,train,sda-all,samples/GSE336196/GSM9829813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829814,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,normal,luna,,RT/saline,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,172130,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097690170198,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829814,,,train,sda-all,samples/GSE336196/GSM9829814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829815,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,normal,luna,,RT/saline,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,173341,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000016273922666,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829815,,,train,sda-all,samples/GSE336196/GSM9829815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9829816,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,perturbation,luna,,Cold,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,167694,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103207022423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829816,,,train,sda-all,samples/GSE336196/GSM9829816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829817,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,perturbation,luna,,Cold,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,152358,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000048932190857,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829817,,,train,sda-all,samples/GSE336196/GSM9829817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829818,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,perturbation,luna,,Cold,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,78138,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000028674986235,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829818,,,train,sda-all,samples/GSE336196/GSM9829818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829819,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,normal,luna,,RT/saline,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,598230,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000064836827317,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829819,,,train,sda-all,samples/GSE336196/GSM9829819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9829820,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,perturbation,luna,,Cold,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,556964,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999913610643169,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829820,,,train,sda-all,samples/GSE336196/GSM9829820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829821,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,perturbation,luna,,2-DG,not stated,luna,not stated,,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,591992,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999082232011743,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829821,,,train,sda-all,samples/GSE336196/GSM9829821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9829822,GSE336196,GSE336196,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,spinal cord,luna,UBERON:0002240,spinal cord,"Spinal cord (from thoracic, lumbar, and sacral parts)",primary tissue,,,perturbation,luna,,2-DG,not stated,luna,not stated,,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,618208,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000102676062427,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829822,,,train,sda-all,samples/GSE336196/GSM9829822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9830047,GSE336209,GSE336209,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0018076,tuberculosis,disease,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,398650,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999976998803938,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830047,,,train,sda-all,samples/GSE336209/GSM9830047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9830048,GSE336209,GSE336209,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0018076,tuberculosis,disease,luna,,,not stated,luna,not stated,,male,extracted field,male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,361007,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999137415466705,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830048,,,train,sda-all,samples/GSE336209/GSM9830048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9830049,GSE336209,GSE336209,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0018076,tuberculosis,disease,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,312610,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999890714154243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830049,,,train,sda-all,samples/GSE336209/GSM9830049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9830050,GSE336209,GSE336209,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,lung,primary tissue,MONDO:0018076,tuberculosis,disease,luna,,,not stated,luna,not stated,,female,extracted field,female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,302232,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012177301509,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830050,,,train,sda-all,samples/GSE336209/GSM9830050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9837325,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,27886,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000222969264545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837325,,,train,sda-all,samples/GSE336556/GSM9837325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837326,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,3900,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000253344142683,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837326,,,train,sda-all,samples/GSE336556/GSM9837326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837327,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13110,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025635767023,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837327,,,train,sda-all,samples/GSE336556/GSM9837327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837328,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,74724,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999943659855769,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837328,,,train,sda-all,samples/GSE336556/GSM9837328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837329,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83604,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999793255536157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837329,,,train,sda-all,samples/GSE336556/GSM9837329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9837330,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,20345,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999931394072447,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837330,,,train,sda-all,samples/GSE336556/GSM9837330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9837331,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60123,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999725010312113,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837331,,,train,sda-all,samples/GSE336556/GSM9837331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9837332,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37429,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000087434821315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837332,,,train,sda-all,samples/GSE336556/GSM9837332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837333,GSE336556,GSE336556,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,47611,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998049921996873,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837333,,,train,sda-all,samples/GSE336556/GSM9837333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9839078,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,689749,18129,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9839078,,,val,sda-all,samples/GSE336633/GSM9839078,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839079,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,489441,18129,counts,um,1.0,verified,False,,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9839079,,,val,sda-all,samples/GSE336633/GSM9839079,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839080,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,655234,18129,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839080,,,val,sda-all,samples/GSE336633/GSM9839080,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,feature_species_differs
GSM9839081,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,589611,18129,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839081,,,val,sda-all,samples/GSE336633/GSM9839081,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839082,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,684861,18125,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839082,,,val,sda-all,samples/GSE336633/GSM9839082,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,feature_species_differs
GSM9839083,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,676352,18125,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839083,,,val,sda-all,samples/GSE336633/GSM9839083,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839084,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,696701,18125,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839084,,,val,sda-all,samples/GSE336633/GSM9839084,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,feature_species_differs
GSM9839085,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,655856,18125,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839085,,,val,sda-all,samples/GSE336633/GSM9839085,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839086,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,607205,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839086,,,val,sda-all,samples/GSE336633/GSM9839086,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839087,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,458803,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839087,,,val,sda-all,samples/GSE336633/GSM9839087,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,feature_species_differs
GSM9839088,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,676349,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839088,,,val,sda-all,samples/GSE336633/GSM9839088,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,feature_species_differs
GSM9839089,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,454987,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839089,,,val,sda-all,samples/GSE336633/GSM9839089,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9839090,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,669776,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839090,,,val,sda-all,samples/GSE336633/GSM9839090,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,feature_species_differs
GSM9839091,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,455147,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839091,,,val,sda-all,samples/GSE336633/GSM9839091,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839092,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,629929,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839092,,,val,sda-all,samples/GSE336633/GSM9839092,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,feature_species_differs
GSM9839093,GSE336633+GSE336978,GSE336633,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,heart,luna,UBERON:0000948,heart,heart,primary tissue,,,normal,luna,,normal control,not stated,luna,not stated,,unknown,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,580664,18163,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9839093,,,val,sda-all,samples/GSE336633/GSM9839093,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,feature_species_differs
GSM9843765,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,175270,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843765,,,train,sda-all,samples/GSE336853/GSM9843765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843766,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatNonResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,271646,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843766,,,train,sda-all,samples/GSE336853/GSM9843766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843767,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatNonResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,143733,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843767,,,train,sda-all,samples/GSE336853/GSM9843767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843768,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,135286,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843768,,,train,sda-all,samples/GSE336853/GSM9843768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843769,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,182225,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843769,,,train,sda-all,samples/GSE336853/GSM9843769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9843770,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,229735,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843770,,,train,sda-all,samples/GSE336853/GSM9843770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843771,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatNonResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,241086,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843771,,,train,sda-all,samples/GSE336853/GSM9843771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843772,GSE336853,GSE336853,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,rectum,luna,UBERON:0001052,rectum,rectum,primary tissue,MONDO:0005101,ulcerative colitis,disease,luna,,PreTreatNonResponder,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,91720,19244,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9843772,,,train,sda-all,samples/GSE336853/GSM9843772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9844156,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0001085,interstitial nephritis,disease,luna,"AIN, ATI, reference",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,121864,9644,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9844156,,,train,sda-all,samples/GSE336890/GSM9844156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9844157,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001851,cortex,kidney,primary tissue,MONDO:0001085,interstitial nephritis,disease,luna,AIN,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,23409,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000110035211267,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844157,,,train,sda-all,samples/GSE336890/GSM9844157,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9844158,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0000958,medulla of organ,kidney,primary tissue,MONDO:0001085,interstitial nephritis,disease,luna,AIN,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,13860,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844158,,,train,sda-all,samples/GSE336890/GSM9844158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9844159,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001851,cortex,kidney,primary tissue,MONDO:0001166,nephritis,disease,luna,ATI,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,16807,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000219298245614,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844159,,,train,sda-all,samples/GSE336890/GSM9844159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9844160,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001851,cortex,kidney,primary tissue,MONDO:0001166,nephritis,disease,luna,ATI,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,12177,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999060644773424,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844160,,,train,sda-all,samples/GSE336890/GSM9844160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9844161,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001851,cortex,kidney,primary tissue,MONDO:0001085,interstitial nephritis,disease,luna,AIN,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,21387,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998534583821796,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844161,,,train,sda-all,samples/GSE336890/GSM9844161,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9844162,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0001851,cortex,kidney,primary tissue,MONDO:0001085,interstitial nephritis,disease,luna,"AIN, ATI",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,24221,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000034441587069,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844162,,,train,sda-all,samples/GSE336890/GSM9844162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9844163,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,reference,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,26598,9644,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000038803807947,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844163,,,train,sda-all,samples/GSE336890/GSM9844163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9844164,GSE336890,GSE336890,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,MONDO:0001085,interstitial nephritis,disease,luna,"AIN, ATI, reference",,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,98714,9644,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9844164,,,train,sda-all,samples/GSE336890/GSM9844164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9848653,GSE337131,GSE337131,Spatial transcriptomics of early-grade Huntington’s disease and control Caudate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,Caudate,primary tissue,MONDO:0007739,Huntington disease,disease,luna,PN,,adult,age rule: bare number read as years,adult,59.9,male,extracted field,male,GSE337131:BG_14,BG_14,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,687015,39125,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9848653,,,val,sda-all,samples/GSE337131/GSM9848653,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9848654,GSE337131,GSE337131,Spatial transcriptomics of early-grade Huntington’s disease and control Caudate,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,brain,luna,UBERON:0000955,brain,Caudate,primary tissue,MONDO:0007739,Huntington disease,disease,luna,HD (grade 0/1),,adult,age rule: bare number read as years,adult,59,male,extracted field,male,GSE337131:BG_13,BG_13,fresh frozen,Fresh-frozen,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,688126,37082,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9848654,,,val,sda-all,samples/GSE337131/GSM9848654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.28, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9852121,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60866,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000096000472616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852121,,,train,sda-all,samples/GSE337270/GSM9852121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852122,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,92702,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999926188367283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852122,,,train,sda-all,samples/GSE337270/GSM9852122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9852123,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,116070,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000124062637847,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852123,,,train,sda-all,samples/GSE337270/GSM9852123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852124,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,93056,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999980608129073,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852124,,,train,sda-all,samples/GSE337270/GSM9852124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852125,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,67756,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999284260083976,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852125,,,train,sda-all,samples/GSE337270/GSM9852125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852126,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,115307,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000110809053838,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852126,,,train,sda-all,samples/GSE337270/GSM9852126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9852127,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,108738,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999924121185365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852127,,,train,sda-all,samples/GSE337270/GSM9852127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852128,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,102548,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000116423470972,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852128,,,train,sda-all,samples/GSE337270/GSM9852128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9852129,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,87165,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000015904319612,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852129,,,train,sda-all,samples/GSE337270/GSM9852129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852130,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,100588,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998965904390474,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852130,,,train,sda-all,samples/GSE337270/GSM9852130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9852131,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,99780,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999931007837509,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852131,,,train,sda-all,samples/GSE337270/GSM9852131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852132,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,107932,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000027583163237,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852132,,,train,sda-all,samples/GSE337270/GSM9852132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852133,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,81569,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000135135135135,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852133,,,train,sda-all,samples/GSE337270/GSM9852133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852134,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,109767,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000096519772764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852134,,,train,sda-all,samples/GSE337270/GSM9852134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852135,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,109123,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999987070080166,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852135,,,train,sda-all,samples/GSE337270/GSM9852135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9852136,GSE337270,GSE337270,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,adult,age rule: age with unit,adult,11-12 weeks,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,111646,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500005170898185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852136,,,train,sda-all,samples/GSE337270/GSM9852136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9853377,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2031,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853377,,,val,sda-all,samples/GSE337336/GSM9853377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9853378,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:2,2,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2772,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853378,,,val,sda-all,samples/GSE337336/GSM9853378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9853379,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:3,3,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2026,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853379,,,val,sda-all,samples/GSE337336/GSM9853379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9853380,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:4,4,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2820,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853380,,,val,sda-all,samples/GSE337336/GSM9853380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9853381,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:5,5,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3418,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853381,,,val,sda-all,samples/GSE337336/GSM9853381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9853382,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:6,6,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1173,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853382,,,val,sda-all,samples/GSE337336/GSM9853382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9853383,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:7,7,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,1675,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853383,,,val,sda-all,samples/GSE337336/GSM9853383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM9853384,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,patch,not stated,luna,not stated,,unknown,not stated,,GSE337336:8,8,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,2439,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853384,,,val,sda-all,samples/GSE337336/GSM9853384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.48, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9853385,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:9,9,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4947,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853385,,,val,sda-all,samples/GSE337336/GSM9853385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9853386,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:10,10,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,7952,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853386,,,val,sda-all,samples/GSE337336/GSM9853386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9853387,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:11,11,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4354,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853387,,,val,sda-all,samples/GSE337336/GSM9853387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9853388,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:12,12,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3782,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853388,,,val,sda-all,samples/GSE337336/GSM9853388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9853389,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:13,13,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,3373,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853389,,,val,sda-all,samples/GSE337336/GSM9853389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9853390,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:14,14,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,11739,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853390,,,val,sda-all,samples/GSE337336/GSM9853390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9853391,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:15,15,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,4885,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853391,,,val,sda-all,samples/GSE337336/GSM9853391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9853392,GSE337336,GSE337336,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,skin,luna,UBERON:0000014,zone of skin,skin,tumour tissue,MONDO:0009691,mycosis fungoides,disease,luna,mycosis fungoides,plaque,not stated,luna,not stated,,unknown,not stated,,GSE337336:16,16,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,6331,1000,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9853392,,,val,sda-all,samples/GSE337336/GSM9853392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9856933,GSE337521,GSE337521,"Efficacy, safety, and spatial transcriptomic rationale of orelabrutinib plus obinutuzumab in marginal zone lymphoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,thyroid,luna,UBERON:0002046,thyroid gland,thyroid,tumour tissue,MONDO:0006464,thyroid gland mucosa-associated lymphoid tissue lymphoma,disease,luna,,first-line orelabrutinib plus obinutuzumab cohort; pretreatment biopsy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,50739,18085,counts,um,1.0,verified,True,H&E-like (heuristic),1.2884697655653639,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42436125,,GSM9856933,,,test,sda-all,samples/GSE337521/GSM9856933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9856934,GSE337521,GSE337521,"Efficacy, safety, and spatial transcriptomic rationale of orelabrutinib plus obinutuzumab in marginal zone lymphoma",Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:8480065,labial gland,labial gland,tumour tissue,MONDO:0007650,MALT lymphoma,disease,luna,,first-line orelabrutinib plus obinutuzumab cohort; pretreatment biopsy,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,144957,18085,counts,um,1.0,verified,True,H&E-like (heuristic),0.673467259324481,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42436125,,GSM9856934,,,test,sda-all,samples/GSE337521/GSM9856934,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9857595,GSE337537,GSE337537,Persistent Lung Inflammation and Fibrosis After Mouse-Adapted Omicron BA.1 Infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Pulmonary tissue,primary tissue,,,normal,luna,,PBS Mock Infected,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2370,19465,counts,um,1.0,verified,True,H&E,7.000046564739912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9857595,,,train,sda-all,samples/GSE337537/GSM9857595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9857596,GSE337537,GSE337537,Persistent Lung Inflammation and Fibrosis After Mouse-Adapted Omicron BA.1 Infection,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Pulmonary tissue,primary tissue,MONDO:0005550,infectious disease,disease,luna,,Omicron BA.1 MA Infected,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1817,19465,counts,um,1.0,verified,True,H&E,6.931628435795099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9857596,,,train,sda-all,samples/GSE337537/GSM9857596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9858163,GSE337578,GSE337578,The spatial transcriptomics of the mouse brain 3 days after tMCAO,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Other,release v3,SeekSpace,sequencing-based,SeekSpace,,,cell,30560,32286,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9858163,,,train,sda-all,samples/GSE337578/GSM9858163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9858855,GSE337623,GSE337623,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,GDF15,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4863,19465,counts,um,1.0,verified,True,H&E,4.481369845974921,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858855,,,train,sda-all,samples/GSE337623/GSM9858855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9858856,GSE337623,GSE337623,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,GDF15,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4879,19465,counts,um,1.0,verified,True,H&E,4.365690978170349,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858856,,,train,sda-all,samples/GSE337623/GSM9858856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9858857,GSE337623,GSE337623,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Caloric restriction,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4924,19465,counts,um,1.0,verified,True,H&E,4.177033114104411,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858857,,,train,sda-all,samples/GSE337623/GSM9858857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9858858,GSE337623,GSE337623,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,perturbation,luna,,Caloric restriction,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4963,19465,counts,um,1.0,verified,True,H&E,4.637115338690455,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858858,,,train,sda-all,samples/GSE337623/GSM9858858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9861745,GSE337859,GSE337859,Exploratory Single-nucleus Multiomics of Myeloid Cell States Associated with Neoadjuvant Chemotherapy Response in Human Pancreatic Ductal Adenocarcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,Untreated,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3967,18120,counts,um,1.0,verified,False,,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,UNSURE,registration correct (acceptance too strict),,42735906,,GSM9861745,,,train,sda-all,samples/GSE337859/GSM9861745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9861746,GSE337859,GSE337859,Exploratory Single-nucleus Multiomics of Myeloid Cell States Associated with Neoadjuvant Chemotherapy Response in Human Pancreatic Ductal Adenocarcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0005184,pancreatic ductal adenocarcinoma,disease,luna,,Folfirinox & Gem/Abraxane,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4970,18120,counts,um,1.0,verified,True,H&E,5.8508887444227,VERIFIED,ABSENT,ABSENT,,,VERIFIED,UNSURE,,,42735906,,GSM9861746,,,train,sda-all,samples/GSE337859/GSM9861746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9863174,GSE337933,GSE337933,PTPN1/2 inhibits alveolar macrophage-mediated control of lung metastasis [CosMx SMI],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lymph node,uberon_chain,UBERON:0000029,lymph node,"lung, lymph node",metastasis,,,disease,luna,,multi-region (vehicle and AC484),not stated,luna,not stated,,unknown,not stated,,,,,,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,351037,1194,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9863174,,,val,sda-all,samples/GSE337933/GSM9863174,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.98, ""disease_status"": 0.43, ""uberon"": 0.48, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9866598,GSE338104,GSE338104,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,normal,luna,,untreated control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,347622,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999948282995448,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866598,,,train,sda-all,samples/GSE338104/GSM9866598,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9866599,GSE338104,GSE338104,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Fe-NTA i.p. for 1 week,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,324796,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500005170898185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866599,,,train,sda-all,samples/GSE338104/GSM9866599,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9866600,GSE338104,GSE338104,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Fe-NTA i.p. for 3 weeks,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,377793,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000054456739567,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866600,,,train,sda-all,samples/GSE338104/GSM9866600,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9866601,GSE338104,GSE338104,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,untreated control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,349164,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999963510752165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866601,,,train,sda-all,samples/GSE338104/GSM9866601,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9866602,GSE338104,GSE338104,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Fe-NTA i.p. for 1 week,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,425329,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000030406227196,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866602,,,train,sda-all,samples/GSE338104/GSM9866602,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9866603,GSE338104,GSE338104,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,Rattus norvegicus,10116,Norway rat,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,kidney,luna,UBERON:0002113,kidney,kidney,primary tissue,,,perturbation,luna,,Fe-NTA i.p. for 3 weeks,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,531476,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866603,,,train,sda-all,samples/GSE338104/GSM9866603,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9869917,GSE338249,GSE338249,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],Nymphaea colorata,210225,pocket water lily,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,plant,luna,,,floral bud,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,5703,24059,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9869917,,,test,sda-all,samples/GSE338249/GSM9869917,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.88}",,
GSM9869918,GSE338249,GSE338249,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],Nymphaea colorata,210225,pocket water lily,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,plant,luna,,,floral bud,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,9588,24059,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9869918,,,test,sda-all,samples/GSE338249/GSM9869918,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9869919,GSE338249,GSE338249,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],Nymphaea colorata,210225,pocket water lily,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,plant,luna,,,floral bud,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,18401,24059,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9869919,,,test,sda-all,samples/GSE338249/GSM9869919,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.81}",,
GSM9869920,GSE338249,GSE338249,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],Nymphaea colorata,210225,pocket water lily,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,plant,luna,,,floral bud,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,40741,24059,counts,unstated,,unresolved,False,,,,,,units_unstated,zero_count_observations,VERIFIED,,,,,,GSM9869920,,,test,sda-all,samples/GSE338249/GSM9869920,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM9869921,GSE338249,GSE338249,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],Nymphaea colorata,210225,pocket water lily,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,plant,luna,,,floral bud,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,BMK S1000,GEO series text (assay_final.csv),BMKMANU S1000/S3000,sequencing-based,other,,,spot,34939,24059,counts,unstated,,unresolved,False,,,,,,units_unstated,,VERIFIED,,,,,,GSM9869921,,,test,sda-all,samples/GSE338249/GSM9869921,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM9873160,GSE338404,GSE338404,MALADAPTIVE IMMUNE-FIBROTIC AXIS DRIVES IMPAIRED LONG BONE REGENERATION UNDER MECHANICAL INSTABILITY,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,femoral fracture callus,primary tissue,MONDO:0005315,bone fracture,disease,luna,,"Fracture stabilized with a low-stiffness intramedullary nail, producing a high-strain environment (>15% interfragmentary strain)",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3249,19465,counts,um,1.0,verified,True,H&E,8.954998923394227,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42664332,,GSM9873160,,,test,sda-all,samples/GSE338404/GSM9873160,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9873161,GSE338404,GSE338404,MALADAPTIVE IMMUNE-FIBROTIC AXIS DRIVES IMPAIRED LONG BONE REGENERATION UNDER MECHANICAL INSTABILITY,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,bone,luna,UBERON:0002481,bone tissue,femoral fracture callus,primary tissue,MONDO:0005315,bone fracture,disease,mondo_predicate (Luna: perturbation),,"Fracture stabilized with a high-stiffness intramedullary nail, producing a low-strain environment (<5% interfragmentary strain)",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2031,19465,counts,um,1.0,verified,True,H&E,8.393079441659857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42664332,,GSM9873161,,,test,sda-all,samples/GSE338404/GSM9873161,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9875803,GSE338506,GSE338506,Spatial transcriptomic profiling of human gastric cancer FFPE specimens,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,stomach,luna,UBERON:0000945,stomach,Stomach,tumour tissue,MONDO:0001056,gastric cancer,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,18061,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9875803,,,train,sda-all,samples/GSE338506/GSM9875803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9876361,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1392,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.329313102928834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific modality should be stated,42520160,,GSM9876361,,,train,sda-all,samples/GSE338525/GSM9876361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9876362,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1537,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.395083781084586,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific modality should be stated,42520160,,GSM9876362,,,train,sda-all,samples/GSE338525/GSM9876362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9876363,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1215,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.5634884062291645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876363,,,train,sda-all,samples/GSE338525/GSM9876363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9876364,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,944,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.316903280254891,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876364,,,train,sda-all,samples/GSE338525/GSM9876364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9876365,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,816,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.031197389408842,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),"registration is good, but the fluorescence should be stated",42520160,,GSM9876365,,,train,sda-all,samples/GSE338525/GSM9876365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876366,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1224,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.07395204977273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876366,,,train,sda-all,samples/GSE338525/GSM9876366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9876367,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1265,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.075850979931831,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),"registration is good, but the fluorescence should be stated",42520160,,GSM9876367,,,train,sda-all,samples/GSE338525/GSM9876367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876368,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0008867,liver disorder;biliary atresia,disease,luna,billiary atresia (BA),,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,964,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.114183864000849,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),"registration is good, but the fluorescence should be stated",42520160,,GSM9876368,,,train,sda-all,samples/GSE338525/GSM9876368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9876369,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0015762;MONDO:0006322,progressive familial intrahepatic cholestasis;non-neoplastic bile duct disorder,disease,luna,Progressive Familial Intrahepatic Cholestasis (PFIC),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,737,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.9357479768010073,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876369,,,train,sda-all,samples/GSE338525/GSM9876369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876370,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0015762;MONDO:0006322,progressive familial intrahepatic cholestasis;non-neoplastic bile duct disorder,disease,luna,Progressive Familial Intrahepatic Cholestasis (PFIC),,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,636,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.9137173219599073,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876370,,,train,sda-all,samples/GSE338525/GSM9876370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876371,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0007318;MONDO:0001751;MONDO:0006322,liver disorder;Alagille syndrome;cholestasis;non-neoplastic bile duct disorder,disease,luna,Alagille Syndrome,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1712,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.874318318228861,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876371,,,train,sda-all,samples/GSE338525/GSM9876371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9876372,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0005154;MONDO:0007318;MONDO:0001751;MONDO:0006322,liver disorder;Alagille syndrome;cholestasis;non-neoplastic bile duct disorder,disease,luna,Alagille Syndrome,,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1644,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.846862599088768,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876372,,,train,sda-all,samples/GSE338525/GSM9876372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9876373,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Normal,,not stated,luna,not stated,,unknown,not stated,not collected,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1078,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,4.0116683492127025,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,other,"registration is good, but the fluorescence should be stated; the image may look gridded",42520160,,GSM9876373,,,train,sda-all,samples/GSE338525/GSM9876373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9876374,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Normal,,not stated,luna,not stated,,unknown,not stated,not collected,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2201,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.9450504498534062,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,other,"registration is good, but the fluorescence should be stated; the image may look gridded",42520160,,GSM9876374,,,train,sda-all,samples/GSE338525/GSM9876374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9876375,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Normal,,not stated,luna,not stated,,unknown,not stated,not collected,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1521,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.899380951767101,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876375,,,train,sda-all,samples/GSE338525/GSM9876375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9876376,GSE338525,GSE338525,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,Normal,,not stated,luna,not stated,,unknown,not stated,not collected,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1549,37481,counts,um,1.0,verified,True,fluorescence: immunofluorescence,3.8944974451252947,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876376,,,train,sda-all,samples/GSE338525/GSM9876376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9879486,GSE338671,GSE338671,A Novel Heterozygous STAT5B Loss-of-Function Variant Associated with Interleukin-17A-Responsive Systemic Juvenile Idiopathic Arthritis-like Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,"Heterozygous STAT5B loss-of-function variant, c.415C>T (p.Gln139Ter)",not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,75549,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000097732603597,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9879486,,,train,sda-all,samples/GSE338671/GSM9879486,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9879487,GSE338671,GSE338671,A Novel Heterozygous STAT5B Loss-of-Function Variant Associated with Interleukin-17A-Responsive Systemic Juvenile Idiopathic Arthritis-like Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37295,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956440301433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9879487,,,train,sda-all,samples/GSE338671/GSM9879487,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9879488,GSE338671,GSE338671,A Novel Heterozygous STAT5B Loss-of-Function Variant Associated with Interleukin-17A-Responsive Systemic Juvenile Idiopathic Arthritis-like Disease,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0007616,layer of synovial tissue,synovium,primary tissue,MONDO:0011429,juvenile idiopathic arthritis,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,38514,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999983642311886,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9879488,,,train,sda-all,samples/GSE338671/GSM9879488,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9893296,GSE339304,GSE339304,Multimodal spatial profiling reveals distinct myeloid-defined ENKTL subgroups and tumor-myeloid cooperativity within prognostic inflammatory niche [ENKTL_CosMx6x],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,unknown,luna,,,ENKTL FFPE sample,tumour tissue,MONDO:0019472,extranodal nasal NK/T cell lymphoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,CosMx,release v3,CosMx,imaging-based,CosMx,,,cell,120696,6175,unknown,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9893296,,,train,sda-all,samples/GSE339304/GSM9893296,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9895920,GSE339455,GSE339455,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Formalin Fixed Paraffin embedded kidney tissue,primary tissue,MONDO:0024633,hypertensive nephropathy,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,786,37082,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.814940550237359,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895920,,,val,sda-all,samples/GSE339455/GSM9895920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9895921,GSE339455,GSE339455,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Formalin Fixed Paraffin embedded kidney tissue,primary tissue,MONDO:0024633,hypertensive nephropathy,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1212,37082,counts,um,1.0,verified,True,blue bright-field stain (heuristic),3.697794218598132,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895921,,,val,sda-all,samples/GSE339455/GSM9895921,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9895922,GSE339455,GSE339455,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Formalin Fixed Paraffin embedded kidney tissue,primary tissue,MONDO:0024633,hypertensive nephropathy,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1125,37082,counts,um,1.0,verified,True,blue bright-field stain (heuristic),4.581459015002735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895922,,,val,sda-all,samples/GSE339455/GSM9895922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9895923,GSE339455,GSE339455,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,kidney,luna,UBERON:0002113,kidney,Formalin Fixed Paraffin embedded kidney tissue,primary tissue,MONDO:0024633,hypertensive nephropathy,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,904,37082,counts,um,1.0,verified,True,blue bright-field stain (heuristic),5.086483448802158,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895923,,,val,sda-all,samples/GSE339455/GSM9895923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9901430,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,190499,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000067567567568,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901430,,,train,sda-all,samples/GSE341169/GSM9901430,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9901431,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,179565,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999156545209167,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901431,,,train,sda-all,samples/GSE341169/GSM9901431,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9901432,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,129522,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000242483026187,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901432,,,train,sda-all,samples/GSE341169/GSM9901432,sda-tissue-disease-2.4,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.67, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9901433,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,162075,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999828273114433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901433,,,train,sda-all,samples/GSE341169/GSM9901433,sda-tissue-disease-2.4,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9901434,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,193664,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000448922585794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901434,,,train,sda-all,samples/GSE341169/GSM9901434,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.98, ""disease_status"": 0.77, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM9901435,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,171459,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000475761217948,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901435,,,train,sda-all,samples/GSE341169/GSM9901435,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM9901436,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,125982,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000128047531244,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901436,,,train,sda-all,samples/GSE341169/GSM9901436,sda-tissue-disease-2.4,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9901437,GSE341169,GSE341169,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,Leucoraja erinaceus,7782,little skate,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,other,luna,UBERON:0002100,trunk,embryonic trunk transverse section,primary tissue,,,normal,luna,,,embryonic,luna,embryonic,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,137905,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000355546525803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901437,,,train,sda-all,samples/GSE341169/GSM9901437,sda-tissue-disease-2.4,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9902424,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2493,33538,counts,um,1.0,verified,True,other bright-field stain (heuristic),14.56573535399683,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902424,,,test,sda-all,samples/GSE341225/GSM9902424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902425,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3997,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.608818814924081,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902425,,,test,sda-all,samples/GSE341225/GSM9902425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902426,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3049,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.627984496572244,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902426,,,test,sda-all,samples/GSE341225/GSM9902426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902427,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4499,33538,counts,um,1.0,verified,True,other bright-field stain (heuristic),14.624076768297233,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902427,,,test,sda-all,samples/GSE341225/GSM9902427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902428,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3333,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.629647765192955,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902428,,,test,sda-all,samples/GSE341225/GSM9902428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902429,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3140,33538,counts,um,1.0,verified,True,other bright-field stain (heuristic),14.604940572874993,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902429,,,test,sda-all,samples/GSE341225/GSM9902429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902430,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3404,33538,counts,um,1.0,verified,True,H&E-like (heuristic),15.624300100084753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902430,,,test,sda-all,samples/GSE341225/GSM9902430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902431,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2632,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.621861455441636,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902431,,,test,sda-all,samples/GSE341225/GSM9902431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902432,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1181,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.624479677966056,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902432,,,test,sda-all,samples/GSE341225/GSM9902432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9902433,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0019781,astrocytoma (excluding glioblastoma),disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3951,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.633790307315982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902433,,,test,sda-all,samples/GSE341225/GSM9902433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902436,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,797,33538,counts,um,1.0,verified,True,blue bright-field stain (heuristic),15.675014769851273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902436,,,test,sda-all,samples/GSE341225/GSM9902436,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902438,GSE341225,GSE341225,Spatial analysis reveals the evolving organization of IDH-mutant glioma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0000955,brain,IDH mutant glioma,tumour tissue,MONDO:0016695,oligodendroglioma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2656,33538,counts,um,1.0,verified,True,H&E-like (heuristic),14.609733594738332,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902438,,,test,sda-all,samples/GSE341225/GSM9902438,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902814,GSE341250,GSE341250,Xenium spatial transcriptomics identifies mesenchymal fibroblast expansion and conserved fibrotic ECM programs in keloid,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005348,keloid,disease,luna,,Normal Skin and Keloid,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,86647,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999903474903475,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9902814,,,train,sda-all,samples/GSE341250/GSM9902814,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.5, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9902815,GSE341250,GSE341250,Xenium spatial transcriptomics identifies mesenchymal fibroblast expansion and conserved fibrotic ECM programs in keloid,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,Skin,primary tissue,MONDO:0005348,keloid,disease,luna,,Keloid,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,64091,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499996308328411,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9902815,,,train,sda-all,samples/GSE341250/GSM9902815,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9905856,GSE341382,GSE341382,Spatial transcriptomics of mouse lung after tumor induction.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,Control,adult,age rule: age with unit,adult,13-14 weeks,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,554078,19059,counts,um,1.0,verified,True,H&E,1.9752066459211004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9905856,,,train,sda-all,samples/GSE341382/GSM9905856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9905857,GSE341382,GSE341382,Spatial transcriptomics of mouse lung after tumor induction.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,lung,luna,UBERON:0002048,lung,Lung,tumour tissue,MONDO:0005070,neoplasm,disease,luna,,DCP monotherapy,adult,age rule: age with unit,adult,13-14 weeks,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,583055,19059,counts,um,1.0,verified,True,H&E,2.028065483496312,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9905857,,,train,sda-all,samples/GSE341382/GSM9905857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9913880,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2381,35441,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.330772370635235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913880,,,train,sda-all,samples/GSE341607/GSM9913880,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM9913881,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2128,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.333445569482791,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913881,,,train,sda-all,samples/GSE341607/GSM9913881,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9913882,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2254,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.332379769138322,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913882,,,train,sda-all,samples/GSE341607/GSM9913882,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM9913883,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1942,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.332083472377197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913883,,,train,sda-all,samples/GSE341607/GSM9913883,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9913884,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2561,35441,counts,um,1.0,verified,True,fluorescence: green (heuristic),4.332106629259694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913884,,,train,sda-all,samples/GSE341607/GSM9913884,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9913885,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3060,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.332567339124698,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913885,,,train,sda-all,samples/GSE341607/GSM9913885,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9913886,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001158,descending colon,Descending colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2097,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.332757234762605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913886,,,train,sda-all,samples/GSE341607/GSM9913886,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9913887,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1571,35441,counts,um,1.0,verified,True,H&E,4.332107689893482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913887,,,train,sda-all,samples/GSE341607/GSM9913887,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9913888,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3012,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.336067799507608,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913888,,,train,sda-all,samples/GSE341607/GSM9913888,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM9913889,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2031,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.334837000039943,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913889,,,train,sda-all,samples/GSE341607/GSM9913889,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9913890,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 172 days (~5 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2872,35441,counts,um,1.0,verified,True,H&E,4.333144130601269,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913890,,,train,sda-all,samples/GSE341607/GSM9913890,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9913891,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIV-ffLuc; suppressive ART initiated 4 days post-infection and maintained for 172 days (~5 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3194,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.332728502113771,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913891,,,train,sda-all,samples/GSE341607/GSM9913891,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9913892,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,small intestine,luna,UBERON:0002115,jejunum,Jejunum,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIV-ffLuc; suppressive ART initiated 4 days post-infection and maintained for 172 days (~5 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2661,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.334786333824161,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913892,,,train,sda-all,samples/GSE341607/GSM9913892,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM9913893,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 193 days (~6 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2602,35441,counts,um,1.0,verified,True,H&E,4.427046056546735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913893,,,train,sda-all,samples/GSE341607/GSM9913893,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9913894,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001157,transverse colon,Transverse colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 193 days (~6 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1268,35441,counts,um,1.0,verified,True,H&E,4.425745266881301,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913894,,,train,sda-all,samples/GSE341607/GSM9913894,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9913895,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 144 days (~4 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3021,35441,counts,um,1.0,verified,True,H&E,4.495590781248508,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913895,,,train,sda-all,samples/GSE341607/GSM9913895,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9913896,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,MONDO:0005550,infectious disease,disease,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 144 days (~4 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1924,21761,counts,um,1.0,verified,True,H&E,4.495954929160284,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913896,,,train,sda-all,samples/GSE341607/GSM9913896,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9913897,GSE341607,GSE341607,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],Macaca mulatta,9544,Rhesus monkey,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,colon,luna,UBERON:0001156,ascending colon,Ascending colon,primary tissue,,,disease,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2988,35441,counts,um,1.0,verified,True,fluorescence: multichannel (heuristic),4.3242623978042145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913897,,,train,sda-all,samples/GSE341607/GSM9913897,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM9919094,GSE341914,GSE341914,Spatial transcriptomic atlas of intestinal segments from KM mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001153,caecum,cecum,primary tissue,,,normal,luna,,germ-free,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,1143,11865,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,,,GSM9919094,,,test,sda-all,samples/GSE341914/GSM9919094,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919095,GSE341914,GSE341914,Spatial transcriptomic atlas of intestinal segments from KM mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,germ-free,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,23254,20436,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,,,GSM9919095,,,test,sda-all,samples/GSE341914/GSM9919095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919096,GSE341914,GSE341914,Spatial transcriptomic atlas of intestinal segments from KM mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,germ-free,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,4830,16919,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,,,GSM9919096,,,test,sda-all,samples/GSE341914/GSM9919096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919097,GSE341914,GSE341914,Spatial transcriptomic atlas of intestinal segments from KM mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001153,caecum,cecum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,683,7290,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,,,GSM9919097,,,test,sda-all,samples/GSE341914/GSM9919097,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9919098,GSE341914,GSE341914,Spatial transcriptomic atlas of intestinal segments from KM mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,colon,luna,UBERON:0001155,colon,colon,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,33515,22599,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,,,GSM9919098,,,test,sda-all,samples/GSE341914/GSM9919098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919099,GSE341914,GSE341914,Spatial transcriptomic atlas of intestinal segments from KM mice,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,small intestine,luna,UBERON:0002116,ileum,ileum,primary tissue,,,normal,luna,,SPF,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,cell,3487,16721,counts,native_grid,,unresolved,False,,,,,,,,VERIFIED,PASS,,,,,GSM9919099,,,test,sda-all,samples/GSE341914/GSM9919099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9920041,GSE341918,GSE341918,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005812,influenza,disease,luna,,PR8-OVA intranasal 500 PFU,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Curio Seeker,sequencing-based,Curioseeker,,,bead,42390,21226,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9920041,,,train,sda-all,samples/GSE341918/GSM9920041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9920042,GSE341918,GSE341918,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005812,influenza,disease,luna,,PR8-OVA intranasal 500 PFU,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Curio Seeker,sequencing-based,Curioseeker,,,bead,47207,21439,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9920042,,,train,sda-all,samples/GSE341918/GSM9920042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9920043,GSE341918,GSE341918,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005812,influenza,disease,luna,,PR8-OVA intranasal 500 PFU,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Curio Seeker,sequencing-based,Curioseeker,,,bead,41816,18750,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9920043,,,train,sda-all,samples/GSE341918/GSM9920043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9920044,GSE341918,GSE341918,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,lung,luna,UBERON:0002048,lung,Lung,primary tissue,MONDO:0005812,influenza,disease,luna,,PR8-OVA intranasal 500 PFU,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,fresh-frozen,Slide-seq,release v3,Curio Seeker,sequencing-based,Curioseeker,,,bead,30616,18402,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9920044,,,train,sda-all,samples/GSE341918/GSM9920044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9921338,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,59145,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999811437191443,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921338,,,train,sda-all,samples/GSE341984/GSM9921338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921339,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,386542,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000079083122445,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921339,,,train,sda-all,samples/GSE341984/GSM9921339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921340,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,111028,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000264799340943,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921340,,,train,sda-all,samples/GSE341984/GSM9921340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921341,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68589,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921341,,,train,sda-all,samples/GSE341984/GSM9921341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921342,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,454031,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000110586847537,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921342,,,train,sda-all,samples/GSE341984/GSM9921342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921343,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,mondo_predicate (Luna: perturbation),,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,203952,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000113430127042,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921343,,,train,sda-all,samples/GSE341984/GSM9921343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921344,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,mondo_predicate (Luna: perturbation),,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,55579,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998854262144815,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921344,,,train,sda-all,samples/GSE341984/GSM9921344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921345,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,mondo_predicate (Luna: perturbation),,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,185750,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000167198271427,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921345,,,train,sda-all,samples/GSE341984/GSM9921345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9921346,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,139603,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500009387908374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921346,,,train,sda-all,samples/GSE341984/GSM9921346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921347,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,271489,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000082665123584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921347,,,train,sda-all,samples/GSE341984/GSM9921347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921348,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,99937,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49997603068072866,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921348,,,train,sda-all,samples/GSE341984/GSM9921348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921349,GSE341984,GSE341984,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,pancreas,luna,UBERON:0001264,pancreas,Pancreas,tumour tissue,MONDO:0009831,malignant pancreatic neoplasm,disease,luna,,Not applicable,not stated,luna,not stated,,unknown,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,182576,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999941259398496,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921349,,,train,sda-all,samples/GSE341984/GSM9921349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9924903,GSE342202,GSE342202,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,male,extracted field,Male,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54424,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924903,,,train,sda-all,samples/GSE342202/GSM9924903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9924904,GSE342202,GSE342202,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,56933,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924904,,,train,sda-all,samples/GSE342202/GSM9924904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9924905,GSE342202,GSE342202,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60698,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924905,,,train,sda-all,samples/GSE342202/GSM9924905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9924906,GSE342202,GSE342202,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,,not stated,luna,not stated,,female,extracted field,Female,,,,,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,58841,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924906,,,train,sda-all,samples/GSE342202/GSM9924906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9927390,GSE342289,GSE342289,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,287576,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000059601213698,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927390,,,train,sda-all,samples/GSE342289/GSM9927390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9927391,GSE342289,GSE342289,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,252807,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999891657638135,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927391,,,train,sda-all,samples/GSE342289/GSM9927391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9927392,GSE342289,GSE342289,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,287565,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999783371604345,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927392,,,train,sda-all,samples/GSE342289/GSM9927392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9927393,GSE342289,GSE342289,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,205914,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000021685388385,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927393,,,train,sda-all,samples/GSE342289/GSM9927393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9928801,GSE342343,GSE342343,The role of Angiopoietin 1 in acute-on-chronic liver failure,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0100193,chronic liver failure,disease,luna,,western diet with alcohol/control and CLP/sham surgeries and AAV-TBG-Angpt1/AAV-control,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,283108,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000016322089228,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9928801,,,train,sda-all,samples/GSE342343/GSM9928801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9936248,GSE342671,GSE342671,"Longitudinal single-cell and spatial transcriptomics reveals intratumor heterogeneity, therapeutic response, and comparative value of canine marginal zone lymphoma [spatial data]",Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,unknown,luna,,,Marginal zone lymphoma,tumour tissue,MONDO:0017604,marginal zone lymphoma,disease,luna,Tumor,VSV,adult,luna,adult,,male,extracted field,Male,,,fresh frozen,fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4609,20257,counts,um,1.0,verified,True,H&E-like (heuristic),3.9441824532788288,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936248,,,val,sda-all,samples/GSE342671/GSM9936248,sda-tissue-disease-2.5,"{""organ"": 0.91, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9936455,GSE342687,GSE342687,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,Tumor,tumour tissue,MONDO:0004971,adenoid cystic carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3628,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.040986982397843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936455,,,train,sda-all,samples/GSE342687/GSM9936455,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9936456,GSE342687,GSE342687,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,Tumor,tumour tissue,MONDO:0004971,adenoid cystic carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,1843,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.051287198100252,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936456,,,train,sda-all,samples/GSE342687/GSM9936456,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936457,GSE342687,GSE342687,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Tumor,tumour tissue,MONDO:0004971,adenoid cystic carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3276,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.05284749071834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936457,,,train,sda-all,samples/GSE342687/GSM9936457,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936458,GSE342687,GSE342687,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,Tumor,tumour tissue,MONDO:0004971,adenoid cystic carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2318,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.048698701582514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936458,,,train,sda-all,samples/GSE342687/GSM9936458,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936459,GSE342687,GSE342687,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Tumor,tumour tissue,MONDO:0004971,adenoid cystic carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4460,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.054937573143291,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936459,,,train,sda-all,samples/GSE342687/GSM9936459,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936460,GSE342687,GSE342687,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,UBERON:0000033,head,Tumor,tumour tissue,MONDO:0004971,adenoid cystic carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3791,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.050972458621778,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936460,,,train,sda-all,samples/GSE342687/GSM9936460,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936741,GSE342703,GSE342703,Spatial-SCB,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0006767,head of femur,Human femoral head,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,14400,18085,counts,um,1.0,verified,True,H&E,2.8799835283589377,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936741,,,train,sda-all,samples/GSE342703/GSM9936741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9936742,GSE342703,GSE342703,Spatial-SCB,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0006767,head of femur,Human femoral head,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,14400,18085,counts,um,1.0,verified,True,H&E,2.8794342105477275,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936742,,,train,sda-all,samples/GSE342703/GSM9936742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9936743,GSE342703,GSE342703,Spatial-SCB,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0006767,head of femur,Human femoral head,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,14400,18085,counts,um,1.0,verified,True,H&E,2.795987569425817,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9936743,,,train,sda-all,samples/GSE342703/GSM9936743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9936744,GSE342703,GSE342703,Spatial-SCB,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone,luna,UBERON:0006767,head of femur,Human femoral head,primary tissue,,,not stated,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium HD,release v3,Visium HD,sequencing-based,Visium HD,,,bin,14400,18085,counts,um,1.0,verified,True,H&E,2.8800430021515644,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936744,,,train,sda-all,samples/GSE342703/GSM9936744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9937015,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4740,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.756083411682934,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937015,,,train,sda-all,samples/GSE342709/GSM9937015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937016,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4488,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.748510179085658,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937016,,,train,sda-all,samples/GSE342709/GSM9937016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937017,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4660,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.751980839972679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937017,,,train,sda-all,samples/GSE342709/GSM9937017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937018,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4981,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.633015440034596,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937018,,,train,sda-all,samples/GSE342709/GSM9937018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937019,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4490,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.636500154245859,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937019,,,train,sda-all,samples/GSE342709/GSM9937019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937020,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4505,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.620063773538589,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937020,,,train,sda-all,samples/GSE342709/GSM9937020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937021,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4991,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.630175459812951,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937021,,,train,sda-all,samples/GSE342709/GSM9937021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937022,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4268,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.896660227135588,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937022,,,train,sda-all,samples/GSE342709/GSM9937022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937023,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4464,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.888568303707904,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937023,,,train,sda-all,samples/GSE342709/GSM9937023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937024,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4313,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.902477962557148,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937024,,,train,sda-all,samples/GSE342709/GSM9937024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937025,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3852,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.89017040014719,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937025,,,train,sda-all,samples/GSE342709/GSM9937025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937026,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4143,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.3420812695579025,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937026,,,train,sda-all,samples/GSE342709/GSM9937026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937027,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4700,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.343632208723565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937027,,,train,sda-all,samples/GSE342709/GSM9937027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937028,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4636,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.350037124207183,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937028,,,train,sda-all,samples/GSE342709/GSM9937028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937029,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3977,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.3423668465419825,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937029,,,train,sda-all,samples/GSE342709/GSM9937029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937030,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4992,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.861150803556135,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937030,,,train,sda-all,samples/GSE342709/GSM9937030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937031,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4681,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.854893631809902,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937031,,,train,sda-all,samples/GSE342709/GSM9937031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937032,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4723,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.8642734250189505,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937032,,,train,sda-all,samples/GSE342709/GSM9937032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937033,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4918,36601,counts,um,1.0,verified,True,H&E-like (heuristic),6.264850540639475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937033,,,train,sda-all,samples/GSE342709/GSM9937033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937034,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4972,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.020381272009828,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937034,,,train,sda-all,samples/GSE342709/GSM9937034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937035,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3735,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.02242598228811,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937035,,,train,sda-all,samples/GSE342709/GSM9937035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937036,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4834,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.0186104832927825,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937036,,,train,sda-all,samples/GSE342709/GSM9937036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937037,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4940,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.033468401033628,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937037,,,train,sda-all,samples/GSE342709/GSM9937037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937038,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4587,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.484176368200269,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937038,,,train,sda-all,samples/GSE342709/GSM9937038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937039,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4793,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.482300079850335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937039,,,train,sda-all,samples/GSE342709/GSM9937039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937040,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4570,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.481064174309167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937040,,,train,sda-all,samples/GSE342709/GSM9937040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9937041,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4965,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.475430011036212,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937041,,,train,sda-all,samples/GSE342709/GSM9937041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937042,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4831,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.728086826444421,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937042,,,train,sda-all,samples/GSE342709/GSM9937042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937043,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3929,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.728229727943467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937043,,,train,sda-all,samples/GSE342709/GSM9937043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937044,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4515,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.724236470248054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937044,,,train,sda-all,samples/GSE342709/GSM9937044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937045,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4895,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.720850227085647,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937045,,,train,sda-all,samples/GSE342709/GSM9937045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937046,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3694,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.544773251589129,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937046,,,train,sda-all,samples/GSE342709/GSM9937046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937047,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3882,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.549219097406841,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937047,,,train,sda-all,samples/GSE342709/GSM9937047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937048,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3453,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.549571299643031,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937048,,,train,sda-all,samples/GSE342709/GSM9937048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937049,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3280,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.5458862706386745,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937049,,,train,sda-all,samples/GSE342709/GSM9937049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937050,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3986,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.118909801960424,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937050,,,train,sda-all,samples/GSE342709/GSM9937050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937051,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3571,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.119180275138686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937051,,,train,sda-all,samples/GSE342709/GSM9937051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937052,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3999,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.113205134214234,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937052,,,train,sda-all,samples/GSE342709/GSM9937052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937053,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4020,36601,counts,um,1.0,verified,True,H&E-like (heuristic),5.113316481815729,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937053,,,train,sda-all,samples/GSE342709/GSM9937053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937054,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4864,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.547040046510486,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937054,,,train,sda-all,samples/GSE342709/GSM9937054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937055,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4908,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.3814357535374615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937055,,,train,sda-all,samples/GSE342709/GSM9937055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937056,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4604,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.3819217730972015,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937056,,,train,sda-all,samples/GSE342709/GSM9937056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937057,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4981,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.381752293776277,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937057,,,train,sda-all,samples/GSE342709/GSM9937057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937058,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4726,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.554718379978793,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937058,,,train,sda-all,samples/GSE342709/GSM9937058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937059,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4525,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.374097115925372,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937059,,,train,sda-all,samples/GSE342709/GSM9937059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937060,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4878,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.5556606878729315,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937060,,,train,sda-all,samples/GSE342709/GSM9937060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937061,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4590,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.371434433771441,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937061,,,train,sda-all,samples/GSE342709/GSM9937061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937062,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4499,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.380775792996989,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937062,,,train,sda-all,samples/GSE342709/GSM9937062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937063,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4593,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.376559707358991,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937063,,,train,sda-all,samples/GSE342709/GSM9937063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9937064,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4064,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.3786420652263365,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937064,,,train,sda-all,samples/GSE342709/GSM9937064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937065,GSE342709,GSE342709,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4098,36601,counts,um,1.0,verified,True,H&E-like (heuristic),4.3763038604834605,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937065,,,train,sda-all,samples/GSE342709/GSM9937065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937425,GSE342738,GSE342738,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002892,medial amygdaloid nucleus,Medial Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE342738:Br8325,Br8325,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,508108,37082,counts,um,1.0,verified,True,H&E-like (heuristic),4.317673913517749,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937425,,,train,sda-all,samples/GSE342738/GSM9937425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM9937426,GSE342738,GSE342738,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002883,central amygdaloid nucleus,Central Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE342738:Br8325,Br8325,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,690382,37082,counts,um,1.0,verified,True,H&E-like (heuristic),4.090316546839667,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937426,,,train,sda-all,samples/GSE342738/GSM9937426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937427,GSE342738,GSE342738,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0001876,amygdala,Intercalated Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE342738:Br9280,Br9280,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,556046,37082,counts,um,1.0,verified,True,H&E-like (heuristic),2.8570360511849295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937427,,,train,sda-all,samples/GSE342738/GSM9937427,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.88, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9937428,GSE342738,GSE342738,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002892,medial amygdaloid nucleus,Medial Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE342738:Br9280,Br9280,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,628882,37082,counts,um,1.0,verified,True,H&E-like (heuristic),3.271267932435241,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937428,,,train,sda-all,samples/GSE342738/GSM9937428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9937429,GSE342738,GSE342738,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,brain,luna,UBERON:0002883,central amygdaloid nucleus,Central Amygdala,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE342738:Br9280,Br9280,fresh frozen,Fresh frozen,Visium HD,release v3,Visium HD,sequencing-based,VisiumHD,,,bin,605187,37082,counts,um,1.0,verified,True,H&E-like (heuristic),2.4327384041757654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937429,,,train,sda-all,samples/GSE342738/GSM9937429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9942072,GSE342913,GSE342913,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,162857,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942072,,,train,sda-all,samples/GSE342913/GSM9942072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9942073,GSE342913,GSE342913,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,normal,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,54343,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000205733095597,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942073,,,train,sda-all,samples/GSE342913/GSM9942073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9942074,GSE342913,GSE342913,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,control,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,217357,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103476821192,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942074,,,train,sda-all,samples/GSE342913/GSM9942074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9942075,GSE342913,GSE342913,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,perturbation,luna,,NAC,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,84887,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000012937949594,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942075,,,train,sda-all,samples/GSE342913/GSM9942075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9942076,GSE342913,GSE342913,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,brain,primary tissue,,,disease,luna,,NAC,not stated,luna,not stated,,unknown,not stated,,,,fixed frozen,Fixed Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,195060,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999920824400701,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942076,,,train,sda-all,samples/GSE342913/GSM9942076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.91, ""life_stage"": 0.97}",,
GSM9945415,GSE343063,GSE343063,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,None (treatment-naïve),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,205397,10029,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9945415,,,train,sda-all,samples/GSE343063/GSM9945415,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9945416,GSE343063,GSE343063,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,None (treatment-naïve),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,117072,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945416,,,train,sda-all,samples/GSE343063/GSM9945416,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9945417,GSE343063,GSE343063,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,None (treatment-naïve),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,283748,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000064486174165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945417,,,train,sda-all,samples/GSE343063/GSM9945417,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9945418,GSE343063,GSE343063,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,None (treatment-naïve),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,460746,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912459413001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945418,,,train,sda-all,samples/GSE343063/GSM9945418,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9945419,GSE343063,GSE343063,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lung,luna,UBERON:0002048,lung,lung,tumour tissue,MONDO:0008433,small cell lung carcinoma,disease,luna,,None (treatment-naïve),not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,396008,10029,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000077611631396,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945419,,,train,sda-all,samples/GSE343063/GSM9945419,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9949642,GSE343350,GSE343350,Multi-tissue gene expression in HNSCC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,larynx; hypopharynx,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,354757,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999782248933017,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9949642,,,train,sda-all,samples/GSE343350/GSM9949642,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.33, ""disease_status"": 0.85, ""uberon"": 0.24, ""life_stage"": 1.0}",sample_kind;uberon,low_confidence_annotation
GSM9949643,GSE343350,GSE343350,Multi-tissue gene expression in HNSCC,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,head and neck,luna,,,larynx; hypopharynx,tumour tissue,MONDO:0010150,head and neck squamous cell carcinoma,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,77787,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998964517465133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9949643,,,train,sda-all,samples/GSE343350/GSM9949643,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.42, ""disease_status"": 0.45, ""uberon"": 0.23, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9950644,GSE343400,GSE343400,Gelated Apoptotic Extracellular Vesicles via Enzyme-Instructed Self-Assembly with Multifunctional Microcapsule for Targeted Atherosclerosis Therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0000947,aorta,Aorta,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo_seq,,,bin,169679,43696,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9950644,,,train,sda-all,samples/GSE343400/GSM9950644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9950645,GSE343400,GSE343400,Gelated Apoptotic Extracellular Vesicles via Enzyme-Instructed Self-Assembly with Multifunctional Microcapsule for Targeted Atherosclerosis Therapy,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,blood vessel,luna,UBERON:0000947,aorta,Aorta,primary tissue,MONDO:0005311,atherosclerosis,disease,mondo_predicate (Luna: perturbation),,,not stated,luna,not stated,,unknown,not stated,,,,,,Stereo-seq,release v3,Stereo-seq,sequencing-based,stereo_seq,,,bin,171373,46505,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9950645,,,train,sda-all,samples/GSE343400/GSM9950645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9963826,GSE343862,GSE343862,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,no MASLD,normal chow diet,adult,age rule: age with unit,adult,38 week old,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4019,31253,counts,um,1.0,verified,True,H&E-like (heuristic),4.338661793706116,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963826,,,val,sda-all,samples/GSE343862/GSM9963826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9963827,GSE343862,GSE343862,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,,,normal,luna,no MASLD,normal chow diet,adult,age rule: age with unit,adult,38 week old,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3961,31253,counts,um,1.0,verified,True,H&E-like (heuristic),4.437078385395416,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963827,,,val,sda-all,samples/GSE343862/GSM9963827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9963828,GSE343862,GSE343862,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,primary tissue,MONDO:0007027,metabolic dysfunction-associated steatohepatitis,disease,luna,MASH,HHH diet,adult,age rule: age with unit,adult,38 week old,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3140,31253,counts,um,1.0,verified,True,H&E-like (heuristic),4.200202334593781,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963828,,,val,sda-all,samples/GSE343862/GSM9963828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9963829,GSE343862,GSE343862,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256;MONDO:0013209,hepatocellular carcinoma;metabolic dysfunction-associated steatotic liver disease,disease,luna,MASLD-HCC,HHH diet,adult,age rule: age with unit,adult,38 week old,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3818,31253,counts,um,1.0,verified,True,H&E-like (heuristic),4.338625717875368,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963829,,,val,sda-all,samples/GSE343862/GSM9963829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9963830,GSE343862,GSE343862,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256;MONDO:0013209,hepatocellular carcinoma;metabolic dysfunction-associated steatotic liver disease,disease,luna,MASLD-HCC,HHH diet,adult,age rule: age with unit,adult,52 week old,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3819,31253,counts,um,1.0,verified,True,H&E-like (heuristic),4.477646518753786,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963830,,,val,sda-all,samples/GSE343862/GSM9963830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9963831,GSE343862,GSE343862,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,liver,luna,UBERON:0002107,liver,liver,tumour tissue,MONDO:0007256;MONDO:0013209,hepatocellular carcinoma;metabolic dysfunction-associated steatotic liver disease,disease,luna,MASLD‑HCC with metastasis,HHH diet,adult,age rule: age with unit,adult,52 week old,male,extracted field,male,,,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4113,31253,counts,um,1.0,verified,True,H&E-like (heuristic),4.618603703717327,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963831,,,val,sda-all,samples/GSE343862/GSM9963831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9976580,GSE344364,GSE344364,A single-cell and spatial transcriptomic atlas provides insights into the genetic regulation of secondary growth and specialized metabolism in the carrot taproot [Spatial Transcriptomics],Daucus carota,4039,carrot,Daucus carota,4039,,False,False,GEO organism field,Daucus carota,,plant,luna,,,Taproots,primary tissue,,,normal,luna,,,adult,luna,adult,,unknown,not stated,,,,fresh frozen,OCT-embedded,Stereo-seq,release v3,Stereo-seq,sequencing-based,Stereo-seq,,,bin,117940,27133,counts,um,1.0,verified,False,,,,,,,,VERIFIED,PASS,,,,,GSM9976580,,,train,sda-all,samples/GSE344364/GSM9976580,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.63}",,
GSM9980504,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10546,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.699707772274859,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980504,,,train,sda-all,samples/GSE344506/GSM9980504,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980505,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4283,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.624044905490477,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980505,,,train,sda-all,samples/GSE344506/GSM9980505,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980506,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3287,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.670744769457283,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980506,,,train,sda-all,samples/GSE344506/GSM9980506,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980507,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2996,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.624843300702095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980507,,,train,sda-all,samples/GSE344506/GSM9980507,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980508,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7731,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.620670089658255,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980508,,,train,sda-all,samples/GSE344506/GSM9980508,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980509,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,6085,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.6694211287857605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980509,,,train,sda-all,samples/GSE344506/GSM9980509,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980510,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,8546,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.619882502652594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980510,,,train,sda-all,samples/GSE344506/GSM9980510,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980511,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10018,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.671169331873407,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980511,,,train,sda-all,samples/GSE344506/GSM9980511,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980512,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4153,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.619287380933359,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980512,,,train,sda-all,samples/GSE344506/GSM9980512,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980513,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4732,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.622992875587217,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980513,,,train,sda-all,samples/GSE344506/GSM9980513,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980514,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3225,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.623317525390845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980514,,,train,sda-all,samples/GSE344506/GSM9980514,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980515,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7935,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.713720960987042,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980515,,,train,sda-all,samples/GSE344506/GSM9980515,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980516,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2913,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.62280465771869,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980516,,,train,sda-all,samples/GSE344506/GSM9980516,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980517,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4319,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.618857489978507,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980517,,,train,sda-all,samples/GSE344506/GSM9980517,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980518,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12388,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.621908726999012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980518,,,train,sda-all,samples/GSE344506/GSM9980518,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980519,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,11536,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.6711497193751494,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980519,,,train,sda-all,samples/GSE344506/GSM9980519,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980520,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,5117,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.620430767847997,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980520,,,train,sda-all,samples/GSE344506/GSM9980520,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980521,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7704,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.617738687570747,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980521,,,train,sda-all,samples/GSE344506/GSM9980521,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980522,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10497,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.621322313607839,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980522,,,train,sda-all,samples/GSE344506/GSM9980522,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980523,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4575,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.672642104555541,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980523,,,train,sda-all,samples/GSE344506/GSM9980523,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980524,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7181,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.717060276952635,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980524,,,train,sda-all,samples/GSE344506/GSM9980524,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980525,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7086,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.668040203843306,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980525,,,train,sda-all,samples/GSE344506/GSM9980525,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980526,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10770,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.6467169146536795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980526,,,train,sda-all,samples/GSE344506/GSM9980526,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980527,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13594,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.718955174945757,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,,,GSM9980527,,,train,sda-all,samples/GSE344506/GSM9980527,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980528,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4394,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.648510005866487,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980528,,,train,sda-all,samples/GSE344506/GSM9980528,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980529,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12451,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.7187977199433435,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,looks somewhat odd,,,GSM9980529,,,train,sda-all,samples/GSE344506/GSM9980529,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980530,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4171,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.6725934056196845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980530,,,train,sda-all,samples/GSE344506/GSM9980530,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980531,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,9181,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.696788581112594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980531,,,train,sda-all,samples/GSE344506/GSM9980531,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980532,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10347,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.669781432396223,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980532,,,train,sda-all,samples/GSE344506/GSM9980532,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980533,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Exp,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,10752,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.6209249239509775,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980533,,,train,sda-all,samples/GSE344506/GSM9980533,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980534,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Pos_ART_Naive,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,7931,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.706544220886225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980534,,,train,sda-all,samples/GSE344506/GSM9980534,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980535,GSE344506,GSE344506,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,DLBCL Biopsy,tumour tissue,MONDO:0018905,diffuse large B-cell lymphoma,disease,luna,,HIV_Neg,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,13601,18085,counts,um,1.0,verified,True,H&E-like (heuristic),4.668967241026095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980535,,,train,sda-all,samples/GSE344506/GSM9980535,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9981854,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,adult,age rule: bare number read as years,adult,57,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,967159,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499998783987548,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981854,,,train,sda-all,samples/GSE344584/GSM9981854,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981855,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,adult,age rule: bare number read as years,adult,54,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,727925,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000103589654119,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981855,,,train,sda-all,samples/GSE344584/GSM9981855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981856,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,adult,age rule: bare number read as years,adult,53,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,437136,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999896387749761,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981856,,,train,sda-all,samples/GSE344584/GSM9981856,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981857,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,lymph node,luna,UBERON:0000029,lymph node,Lymph node,metastasis,MONDO:0008170,ovarian cancer,disease,luna,,,adult,age rule: bare number read as years,adult,45,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1101585,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999891257068285,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981857,,,train,sda-all,samples/GSE344584/GSM9981857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981858,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,adult,age rule: bare number read as years,adult,59,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,703019,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000087070091424,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981858,,,train,sda-all,samples/GSE344584/GSM9981858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9981859,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,other,luna,UBERON:0003889,fallopian tube,Fallopian tube,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,aged,age rule: bare number read as years,aged,77,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,716027,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998906333543963,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981859,,,train,sda-all,samples/GSE344584/GSM9981859,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.78, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9981860,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,ovary,luna,UBERON:0000992,ovary,Ovary,tumour tissue,MONDO:0008170,ovarian cancer,disease,luna,,,aged,age rule: bare number read as years,aged,66,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,388133,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999929104314821,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981860,,,train,sda-all,samples/GSE344584/GSM9981860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9981861,GSE344584,GSE344584,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,unknown,luna,,,,unknown,MONDO:0008170,ovarian cancer,disease,luna,,,aged,age rule: bare number read as years,aged,68,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,724177,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998843832148765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981861,,,train,sda-all,samples/GSE344584/GSM9981861,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.77, ""uberon"": NaN, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9982017,GSE344594,GSE344594,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,testis,luna,UBERON:0000473,testis,testis,primary tissue,MONDO:0002145;MONDO:0009047,disorder of sexual differentiation;cryptorchidism,disease,luna,,abdominally retained testis; unilateral cryptorchidism with disorder of sex development,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3929,27046,counts,um,1.0,verified,False,,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982017,,,val,sda-all,samples/GSE344594/GSM9982017,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9982018,GSE344594,GSE344594,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,testis,luna,UBERON:0000473,testis,testis,primary tissue,MONDO:0003150,male reproductive system disorder,disease,luna,,contralateral descended testis from dog with abdominal cryptorchidism,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4731,27046,counts,um,1.0,verified,False,,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982018,,,val,sda-all,samples/GSE344594/GSM9982018,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9982019,GSE344594,GSE344594,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,testis,luna,UBERON:0000473,testis,testis,primary tissue,MONDO:0009047,cryptorchidism,disease,luna,,inguinally retained testis; isolated unilateral cryptorchidism,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4136,27046,counts,um,1.0,verified,False,,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982019,,,val,sda-all,samples/GSE344594/GSM9982019,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM9982020,GSE344594,GSE344594,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,Canis lupus familiaris,9615,dog,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,testis,luna,UBERON:0000473,testis,testis,primary tissue,MONDO:0003150,male reproductive system disorder,disease,luna,,contralateral descended testis from dog with inguinal cryptorchidism,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,4273,27046,counts,um,1.0,verified,False,,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982020,,,val,sda-all,samples/GSE344594/GSM9982020,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9983337,GSE344692,GSE344692,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,Trpv2-/-,embryonic,age rule: embryonic day,embryonic,E16.5,female,extracted field,female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERscope,,,cell,62731,350,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9983337,,,train,sda-all,samples/GSE344692/GSM9983337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM9983338,GSE344692,GSE344692,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,normal,luna,,Trpv2+/+,embryonic,age rule: embryonic day,embryonic,E16.5,female,extracted field,female,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERscope,,,cell,53250,350,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9983338,,,train,sda-all,samples/GSE344692/GSM9983338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM9983339,GSE344692,GSE344692,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,placenta,luna,UBERON:0001987,placenta,Placenta,primary tissue,,,perturbation,luna,,Trpv2-/-,embryonic,age rule: embryonic day,embryonic,E16.5,male,extracted field,male,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERscope,,,cell,52896,350,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9983339,,,train,sda-all,samples/GSE344692/GSM9983339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9983340,GSE344692,GSE344692,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,embryo (whole),luna,UBERON:0004716,conceptus,Whole conceptus,primary tissue,,,normal,luna,,Trpv2+/+,embryonic,age rule: embryonic day,embryonic,E9.5,unknown,not stated,,,,,,MERFISH/MERSCOPE,release v3,MERSCOPE,imaging-based,MERscope,,,cell,180374,350,counts,um,1.0,verified,False,,,,,,,,VERIFIED,,,,,,GSM9983340,,,train,sda-all,samples/GSE344692/GSM9983340,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.51, ""disease_status"": 0.67, ""uberon"": 0.92, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9984135,GSE344748,GSE344748,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,AAV-retro-EGFP in cervical spinal cord,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,31897,32894,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9984135,,,val,sda-all,samples/GSE344748/GSM9984135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9984136,GSE344748,GSE344748,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,AAV-retro-EGFP in cervical spinal cord,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,43657,32894,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9984136,,,val,sda-all,samples/GSE344748/GSM9984136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9984137,GSE344748,GSE344748,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,AAV-retro-EGFP in cervical spinal cord,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,19437,32894,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9984137,,,val,sda-all,samples/GSE344748/GSM9984137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9984138,GSE344748,GSE344748,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,AAV-retro-EGFP in cervical spinal cord,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh frozen,Slide-seq,release v3,Slide-seq,sequencing-based,slide_seq,,,bead,54654,32894,counts,pixel,,unresolved,False,,,,,,,,VERIFIED,,,,,,GSM9984138,,,val,sda-all,samples/GSE344748/GSM9984138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9989019,GSE344969,GSE344969,Spatial transcriptomic profiling of calcified human coronary artery lesions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,coronary artery,primary tissue,MONDO:0002123,calcinosis,disease,luna,,vascular calcification,aged,age rule: age in years,aged,85 years,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3026,18085,counts,um,1.0,verified,True,H&E,5.778412705167272,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9989019,,,train,sda-all,samples/GSE344969/GSM9989019,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9989020,GSE344969,GSE344969,Spatial transcriptomic profiling of calcified human coronary artery lesions,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,blood vessel,luna,UBERON:0001621,coronary artery,coronary artery,primary tissue,MONDO:0002123,calcinosis,disease,luna,,vascular calcification,aged,age rule: age in years,aged,85 years,male,extracted field,male,,,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3112,18085,counts,um,1.0,verified,True,H&E,5.099333578007554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9989020,,,train,sda-all,samples/GSE344969/GSM9989020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10000911,GSE345289,GSE345289,Gene expression mapping of eye after adipocyte depletion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,perturbation,luna,,7 weeks DT injection,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,37071,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999912364563416,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10000911,,,val,sda-all,samples/GSE345289/GSM10000911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM10000912,GSE345289,GSE345289,Gene expression mapping of eye after adipocyte depletion,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,eye,luna,UBERON:0000970,eye,Eye,primary tissue,,,perturbation,luna,,7 weeks DT injection,juvenile,luna,juvenile,,unknown,not stated,,,,fresh frozen,Fresh frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,60468,13780,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999840906198295,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10000912,,,val,sda-all,samples/GSE345289/GSM10000912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 0.98}",,
GSM10001168,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,NDMM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,701075,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000109670501073,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001168,,,train,sda-all,samples/GSE345302/GSM10001168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001169,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,NDMM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,15152,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999890934473434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001169,,,train,sda-all,samples/GSE345302/GSM10001169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001170,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,CBM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,971259,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999890934473434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001170,,,train,sda-all,samples/GSE345302/GSM10001170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM10001171,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,CBM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,135364,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000045278137129,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001171,,,train,sda-all,samples/GSE345302/GSM10001171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001172,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,NDMM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,781716,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000063285313204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001172,,,train,sda-all,samples/GSE345302/GSM10001172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001173,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,CBM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,435167,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000086345843886,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42678098,,GSM10001173,,,train,sda-all,samples/GSE345302/GSM10001173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001174,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,SMM,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,721958,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.499999455005232,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001174,,,train,sda-all,samples/GSE345302/GSM10001174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10001175,GSE345302,GSE345302,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bone marrow,luna,UBERON:0002371,bone marrow,Bone marrow,tumour tissue,MONDO:0009693,plasma cell myeloma,disease,luna,RRMM,Triple class exposed,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,152039,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999827332166874,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001175,,,train,sda-all,samples/GSE345302/GSM10001175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10002162,GSE345359,GSE345359,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,wild type,adult,luna,adult,7 months,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,486207,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM10002162,,,train,sda-all,samples/GSE345359/GSM10002162,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM10002163,GSE345359,GSE345359,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,wild type,adult,luna,adult,7 months,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,460753,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM10002163,,,train,sda-all,samples/GSE345359/GSM10002163,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM10002164,GSE345359,GSE345359,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,wild type,adult,luna,adult,7 months,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,498713,541,counts,um,1.0,verified,False,,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM10002164,,,train,sda-all,samples/GSE345359/GSM10002164,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.98}",,
GSM10002165,GSE345359,GSE345359,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,Mesocricetus auratus,10036,golden hamster,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,wild type,adult,luna,adult,7 months,female,extracted field,female,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,510268,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000037796976241,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10002165,,,train,sda-all,samples/GSE345359/GSM10002165,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.97}",,
GSM10012170,GSE345643,GSE345643,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002080,heart right ventricle,right ventricle (transmural),primary tissue,,,disease,luna,,NF; pRV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,154475,477,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999021909233177,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012170,,,test,sda-all,samples/GSE345643/GSM10012170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM10012171,GSE345643,GSE345643,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002080,heart right ventricle,right ventricle (transmural),primary tissue,,,disease,luna,,pRV,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,190058,477,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998964517465133,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012171,,,test,sda-all,samples/GSE345643/GSM10012171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM10012172,GSE345643,GSE345643,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002080,heart right ventricle,right ventricle (transmural),primary tissue,,,normal,luna,,NF,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,83406,477,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000025883936429,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012172,,,test,sda-all,samples/GSE345643/GSM10012172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM10012173,GSE345643,GSE345643,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002080,heart right ventricle,right ventricle (transmural),primary tissue,,,disease,luna,,RVF,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,31017,477,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000143266475644,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012173,,,test,sda-all,samples/GSE345643/GSM10012173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10012174,GSE345643,GSE345643,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002080,heart right ventricle,right ventricle (transmural),primary tissue,,,disease,luna,,RVF,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,97493,477,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000087199162888,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012174,,,test,sda-all,samples/GSE345643/GSM10012174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10012175,GSE345643,GSE345643,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,heart,luna,UBERON:0002080,heart right ventricle,right ventricle (transmural),primary tissue,,,disease,luna,,RVF,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,68856,477,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999844870380585,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012175,,,test,sda-all,samples/GSE345643/GSM10012175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10012265,GSE345644,GSE345644,Human bladder cell spatial mapping [Xenium],Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,bladder,luna,UBERON:0001255,urinary bladder,Bladder,primary tissue,,,normal,luna,,,aged,age rule: bare number read as years,aged,71,male,extracted field,male,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,hLung_480g,xenium-3.3.0.1,cell,89585,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999834724402942,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012265,,,val,sda-all,samples/GSE345644/GSM10012265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM10013104,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569;MONDO:0007039,acoustic neuroma;NF2-related schwannomatosis,disease,luna,,NF2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,246812,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999887471867967,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013104,,,train,sda-all,samples/GSE345691/GSM10013104,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM10013105,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569;MONDO:0007039,acoustic neuroma;NF2-related schwannomatosis,disease,luna,,NF2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,180115,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000135135135135,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013105,,,train,sda-all,samples/GSE345691/GSM10013105,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM10013106,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569;MONDO:0007039,acoustic neuroma;NF2-related schwannomatosis,disease,luna,,NF2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,114672,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999905061106124,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013106,,,train,sda-all,samples/GSE345691/GSM10013106,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM10013107,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569;MONDO:0007039,acoustic neuroma;NF2-related schwannomatosis,disease,luna,,NF2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,148575,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998970157451483,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013107,,,train,sda-all,samples/GSE345691/GSM10013107,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM10013108,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569;MONDO:0007039,acoustic neuroma;NF2-related schwannomatosis,disease,luna,,NF2,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,152502,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999926114197885,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013108,,,train,sda-all,samples/GSE345691/GSM10013108,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM10013109,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569,acoustic neuroma,disease,luna,,Sporadic,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,181878,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999840561224489,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013109,,,train,sda-all,samples/GSE345691/GSM10013109,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM10013110,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569,acoustic neuroma,disease,luna,,Sporadic,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,81967,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500019603796946,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013110,,,train,sda-all,samples/GSE345691/GSM10013110,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM10013111,GSE345691,GSE345691,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,peripheral nerve,luna,UBERON:0001021,nerve,vestibular schwannoma,tumour tissue,MONDO:0001569,acoustic neuroma,disease,luna,,Sporadic,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,132739,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000056348610068,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013111,,,train,sda-all,samples/GSE345691/GSM10013111,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM10024480,GSE346090,GSE346090,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,MONDO:0006559,hidradenitis suppurativa,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE346090:HS1,HS1,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2942,62710,counts,um,1.0,verified,True,H&E-like (heuristic),4.55810433909172,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024480,,,test,sda-all,samples/GSE346090/GSM10024480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024481,GSE346090,GSE346090,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,MONDO:0006559,hidradenitis suppurativa,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE346090:HS2,HS2,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3293,62710,counts,um,1.0,verified,True,H&E-like (heuristic),4.723707128998128,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024481,,,test,sda-all,samples/GSE346090/GSM10024481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024482,GSE346090,GSE346090,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,MONDO:0006559,hidradenitis suppurativa,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE346090:HS3,HS3,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,2434,62710,counts,um,1.0,verified,True,H&E-like (heuristic),4.557410862323747,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024482,,,test,sda-all,samples/GSE346090/GSM10024482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024483,GSE346090,GSE346090,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,MONDO:0006559,hidradenitis suppurativa,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE346090:HS4,HS4,fresh frozen,Fresh frozen,Visium,release v3,Visium,sequencing-based,Visium,,,spot,3250,62710,counts,um,1.0,verified,True,H&E-like (heuristic),4.679794996243756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024483,,,test,sda-all,samples/GSE346090/GSM10024483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024484,GSE346090,GSE346090,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,skin,luna,UBERON:0000014,zone of skin,HS lesional skin,primary tissue,MONDO:0006559,hidradenitis suppurativa,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,GSE346090:HS5,HS5,FFPE,FFPE,Visium,release v3,Visium,sequencing-based,Visium,,,spot,12911,37082,counts,um,1.0,verified,True,H&E-like (heuristic),4.6664288377315115,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024484,,,test,sda-all,samples/GSE346090/GSM10024484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM10039417,GSE346722,GSE346722,Spatial compartmentalization shapes distinct germinal center states during respiratory viral infection,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,lymph node,luna,UBERON:0002524,mediastinal lymph node,mediastinal lymph node,primary tissue,MONDO:0100096,COVID-19,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,2155761,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500003810477725,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10039417,,,val,sda-all,samples/GSE346722/GSM10039417,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM10039418,GSE346722,GSE346722,Spatial compartmentalization shapes distinct germinal center states during respiratory viral infection,Macaca fascicularis,9541,crab-eating macaque,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,lymph node,luna,UBERON:0002524,mediastinal lymph node,mediastinal lymph node,primary tissue,MONDO:0100096,COVID-19,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,FFPE,FFPE,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,1859898,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000074812393537,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10039418,,,val,sda-all,samples/GSE346722/GSM10039418,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,feature_species_differs
GSM10058081,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3447,32285,counts,um,1.0,verified,True,H&E,4.384874889094179,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058081,,,test,sda-all,samples/GSE347650/GSM10058081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058082,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3504,32285,counts,um,1.0,verified,True,H&E,4.385586278654619,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058082,,,test,sda-all,samples/GSE347650/GSM10058082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058083,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3232,32285,counts,um,1.0,verified,True,H&E,4.384434500550177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058083,,,test,sda-all,samples/GSE347650/GSM10058083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058084,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2940,32285,counts,um,1.0,verified,True,H&E,4.384083236463523,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058084,,,test,sda-all,samples/GSE347650/GSM10058084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058085,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3064,32285,counts,um,1.0,verified,True,H&E,4.0233202635874585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058085,,,test,sda-all,samples/GSE347650/GSM10058085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058086,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2920,32285,counts,um,1.0,verified,True,H&E,4.0264236248204295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058086,,,test,sda-all,samples/GSE347650/GSM10058086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058087,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3038,32285,counts,um,1.0,verified,True,H&E,4.03833887961473,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058087,,,test,sda-all,samples/GSE347650/GSM10058087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058088,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,aged,luna,aged,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3114,32285,counts,um,1.0,verified,True,H&E,4.038221007651808,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058088,,,test,sda-all,samples/GSE347650/GSM10058088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058089,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3709,32285,counts,um,1.0,verified,True,H&E,4.049941055614598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058089,,,test,sda-all,samples/GSE347650/GSM10058089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM10058090,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3433,32285,counts,um,1.0,verified,True,H&E,4.052271088373272,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058090,,,test,sda-all,samples/GSE347650/GSM10058090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM10058091,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3198,32285,counts,um,1.0,verified,True,H&E,4.047587604526553,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058091,,,test,sda-all,samples/GSE347650/GSM10058091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM10058092,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,male,extracted field,male,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3037,32285,counts,um,1.0,verified,True,H&E,4.384080039989511,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058092,,,test,sda-all,samples/GSE347650/GSM10058092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM10058093,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3363,32285,counts,um,1.0,verified,True,H&E,4.043561701703319,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058093,,,test,sda-all,samples/GSE347650/GSM10058093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM10058094,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,3139,32285,counts,um,1.0,verified,True,H&E,4.037089512292712,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058094,,,test,sda-all,samples/GSE347650/GSM10058094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM10058095,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2936,32285,counts,um,1.0,verified,True,H&E,4.039120213000088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058095,,,test,sda-all,samples/GSE347650/GSM10058095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM10058096,GSE347650,GSE347650,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,normal,luna,,no treatment,not stated,luna,not stated,,female,extracted field,female,,,fresh frozen,Fresh-frozen,Visium,release v3,Visium,sequencing-based,visium,,,spot,2678,32285,counts,um,1.0,verified,True,H&E,4.0444179770596955,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058096,,,test,sda-all,samples/GSE347650/GSM10058096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM10073652,GSE348514,GSE348514,Xenium In Situ Spatial Perturb-Seq: Single-cell Functional Genomics of the Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Injected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,171924,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000043094532165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10073652,,,train,sda-all,samples/GSE348514/GSM10073652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10073653,GSE348514,GSE348514,Xenium In Situ Spatial Perturb-Seq: Single-cell Functional Genomics of the Mouse Brain,Mus musculus,10090,house mouse,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,brain,luna,UBERON:0000955,brain,Brain,primary tissue,,,perturbation,luna,,Injected,not stated,luna,not stated,,unknown,not stated,,,,fresh frozen,Fresh Frozen,Xenium,release v3,Xenium,imaging-based,Xenium,,,cell,201587,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999363665287944,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10073653,,,train,sda-all,samples/GSE348514/GSM10073653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10075604,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,222249,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000128945739634,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075604,,,test,sda-all,samples/GSE348584/GSM10075604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075605,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,57248,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000279050640348,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075605,,,test,sda-all,samples/GSE348584/GSM10075605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM10075606,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,69849,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000092760554089,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075606,,,test,sda-all,samples/GSE348584/GSM10075606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075607,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,127565,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49996592148309704,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075607,,,test,sda-all,samples/GSE348584/GSM10075607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075608,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,33105,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075608,,,test,sda-all,samples/GSE348584/GSM10075608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075609,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,73089,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49998873281754674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075609,,,test,sda-all,samples/GSE348584/GSM10075609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075610,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,95945,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.500011256190905,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075610,,,test,sda-all,samples/GSE348584/GSM10075610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075611,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,58675,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000056420672534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075611,,,test,sda-all,samples/GSE348584/GSM10075611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075612,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,tumour tissue,MONDO:0005023,ductal breast carcinoma in situ,disease,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,144344,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075612,,,test,sda-all,samples/GSE348584/GSM10075612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075613,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,66080,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999782847215872,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075613,,,test,sda-all,samples/GSE348584/GSM10075613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075614,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,188199,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999254552961137,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075614,,,test,sda-all,samples/GSE348584/GSM10075614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075615,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,292034,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999905615046677,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075615,,,test,sda-all,samples/GSE348584/GSM10075615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM10075616,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,213768,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.5000070821529745,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075616,,,test,sda-all,samples/GSE348584/GSM10075616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075617,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,60690,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.49999727846723263,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075617,,,test,sda-all,samples/GSE348584/GSM10075617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075618,GSE348584,GSE348584,A single cell and spatial atlas of preinvasive breast cancer,Homo sapiens,9606,human,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,breast,luna,UBERON:0000310,breast,breast,primary tissue,,,normal,luna,,,not stated,luna,not stated,,unknown,not stated,,,,,,Xenium,release v3,Xenium,imaging-based,xenium,,,cell,198205,541,counts,um,1.0,verified,True,fluorescence: DAPI,0.4999956440301433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075618,,,test,sda-all,samples/GSE348584/GSM10075618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,