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a/MIMICIIIAgentBench/table_description/formatted.json b/MIMICIIIAgentBench/table_description/formatted.json new file mode 100644 index 0000000000000000000000000000000000000000..17605c0a3c75ecd5d5c3edb6775f5f90031f6daf --- /dev/null +++ b/MIMICIIIAgentBench/table_description/formatted.json @@ -0,0 +1,726 @@ +[ + { + "file_name": "admissions", + "description": "Contains details for each hospital admission, including timing, demographics, admission source, and discharge info. Each admission has a unique hadm_id.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier; links to PATIENTS table. Patients may have multiple admissions." + }, + { + "column_name": "HADM_ID", + "description": "Unique identifier for each hospital admission (1000000 - 1999999)." + }, + { + "column_name": "ADMITTIME", + "description": "Date and time of hospital admission." + }, + { + "column_name": "DISCHTIME", + "description": "Date and time of hospital discharge." + }, + { + "column_name": "ADMISSION_TYPE", + "description": "Classifies admission urgency (e.g., elective, urgent, emergency)." + }, + { + "column_name": "ADMISSION_LOCATION", + "description": "Location of patient before hospital admission." + }, + { + "column_name": "DISCHARGE_LOCATION", + "description": "Patient's destination after hospital discharge." + }, + { + "column_name": "INSURANCE", + "description": "Patient's insurance for this admission." + }, + { + "column_name": "LANGUAGE", + "description": "Patient's language for this admission." + }, + { + "column_name": "MARITAL_STATUS", + "description": "Patient's marital status for this admission." + }, + { + "column_name": "ETHNICITY", + "description": "Patient's ethnicity for this admission." + }, + { + "column_name": "AGE", + "description": "Patient's age for this admission.." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + } + ] + }, + { + "file_name": "d_icd_diagnoses", + "description": "Lists ICD-9 diagnosis codes used for patient billing.", + "columns": [ + { + "column_name": "ICD9_CODE", + "description": "ICD diagnosis code." + }, + { + "column_name": "SHORT_TITLE", + "description": "Short description of the ICD code." + }, + { + "column_name": "LONG_TITLE", + "description": "Full description of the ICD code." + } + ], + "link": [ + { + "link_table": "diagnoses_icd", + "link_column": "ICD9_CODE" + } + ] + }, + { + "file_name": "d_ccs_diagnoses", + "description": "Lists ICD-9 diagnosis codes in CCS Level used for patient billing.", + "columns": [ + { + "column_name": "icd_code", + "description": "ICD diagnosis code." + }, + { + "column_name": "icd_version", + "description": "ICD version: 9 or 10. ICD-9 codes are numeric (sometimes with E or V), ICD-10 codes start with a letter." + }, + { + "column_name": "long_title", + "description": "Full description of the ICD code in CCS Level." + } + ], + "link": [ + { + "link_table": "diagnoses_icd", + "link_column": "ICD9_CODE" + } + ] + }, + { + "file_name": "d_icd_procedures", + "description": "Defines ICD procedure codes used for billing and identifying performed procedures.", + "columns": [ + { + "column_name": "ICD9_CODE", + "description": "ICD procedure code." + }, + { + "column_name": "SHORT_TITLE", + "description": "Short description of the procedure code." + }, + { + "column_name": "LONG_TITLE", + "description": "Brief definition of the procedure code." + } + ], + "link": [ + { + "link_table": "procedures_icd", + "link_column": "ICD9_CODE" + } + ] + }, + { + "file_name": "d_ccs_procedures", + "description": "Defines ICD procedure codes in CCS Level used for billing and identifying performed procedures.", + "columns": [ + { + "column_name": "icd_code", + "description": "ICD procedure code." + }, + { + "column_name": "icd_version", + "description": "ICD version: 9 (ICD-9) or 10 (ICD-10); decimals are optional." + }, + { + "column_name": "long_title", + "description": "Brief definition of the procedure code in CCS Level." + } + ], + "link": [ + { + "link_table": "procedures_icd", + "link_column": "ICD9_CODE" + } + ] + }, + { + "file_name": "d_labitems", + "description": "Defines all lab measurement itemids used in MIMIC. Links lab events to item details, including fluid, category, and label. Most items map to LOINC codes for interoperability.", + "columns": [ + { + "column_name": "ITEMID", + "description": "Unique ID for each lab concept; links to labevents." + }, + { + "column_name": "LABEL", + "description": "Name of the lab concept for the itemid." + } + ], + "link": [ + { + "link_table": "labevents", + "link_column": "ITEMID" + } + ] + }, + { + "file_name": "diagnoses_icd", + "description": "Lists all ICD-9 diagnoses billed to patients during hospital stays, assigned at discharge based on clinical notes.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospitalization identifier." + }, + { + "column_name": "ICD9_CODE", + "description": "ICD diagnosis code." + }, + { + "column_name": "CHARTTIME", + "description": "Time diagnosis was charted." + } + ], + "link": [ + { + "link_table": "d_icd_diagnoses", + "link_column": "ICD9_CODE" + } + ] + }, + { + "file_name": "labevents", + "description": "Stores all lab test results for a patient, including hematology, blood gases, chemistry, and rare tests.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospitalization identifier." + }, + { + "column_name": "ITEMID", + "description": "Unique lab test concept identifier." + }, + { + "column_name": "CHARTTIME", + "description": "Time the lab test was charted or specimen collected." + }, + { + "column_name": "VALUENUM", + "description": "Lab test result as a numeric value." + }, + { + "column_name": "VALUEUOM", + "description": "Unit of measurement for the result." + } + ], + "link": [ + { + "link_table": "d_labitems", + "link_column": "ITEMID" + }, + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + } + ] + }, + { + "file_name": "microbiologyevents", + "description": "Records microbiology tests, specimen details, organisms found for each patient sample.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospital admission ID." + }, + { + "column_name": "CHARTTIME", + "description": "Date and time the observation was charted." + }, + { + "column_name": "SPEC_TYPE_DESC", + "description": "Description of the specimen type." + }, + { + "column_name": "ORG_NAME", + "description": "Name of the organism grown, if any." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + } + ] + }, + { + "file_name": "patients", + "description": "Stores patient information that does not change over time.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier; primary key." + }, + { + "column_name": "GENDER", + "description": "Patient's genotypical sex." + }, + { + "column_name": "DOB", + "description": "De-identified date of birth." + }, + { + "column_name": "DOD", + "description": "De-identified date of death from hospital and state records; deaths over one year post-discharge are censored." + } + ], + "link": [] + }, + { + "file_name": "prescriptions", + "description": "Contains prescribed medications, including drug names, codes (GSN, NDC), strength, dose, and administration route.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospitalization identifier." + }, + { + "column_name": "STARTDATE", + "description": "Medication start date." + }, + { + "column_name": "STOPDATE", + "description": "Medication stop date." + }, + { + "column_name": "DRUG", + "description": "Free-text medication name." + }, + { + "column_name": "DOSE_VAL_RX", + "description": "Prescribed dose amount." + }, + { + "column_name": "DOSE_UNIT_RX", + "description": "Dose unit of measurement." + }, + { + "column_name": "ROUTE", + "description": "Medication administration route." + } + ], + "link": [] + }, + { + "file_name": "procedures_icd", + "description": "Records all hospital-billed procedures for patients using ICD-9 codes.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospitalization identifier." + }, + { + "column_name": "CHARTTIME", + "description": "Date of the procedure." + }, + { + "column_name": "ICD9_CODE", + "description": "ICD procedure code." + } + ], + "link": [ + { + "link_table": "d_icd_procedures", + "link_column": "ICD9_CODE" + } + ] + }, + { + "file_name": "transfers", + "description": "Tracks patient locations during hospital stays.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospital admission ID." + }, + { + "column_name": "EVENTTYPE", + "description": "Type of transfer event: 'admit', 'transfer', or 'discharge'." + }, + { + "column_name": "CAREUNIT", + "description": "Type of unit or ward where patient is located." + }, + { + "column_name": "INTIME", + "description": "Date and time patient entered the care unit." + }, + { + "column_name": "OUTTIME", + "description": "Date and time patient left the care unit." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + } + ] + }, + { + "file_name": "d_items", + "description": "Defines itemid concepts used in ICU event tables.", + "columns": [ + { + "column_name": "ITEMID", + "description": "Unique identifier for each item." + }, + { + "column_name": "LABEL", + "description": "Name of the concept for the itemid." + }, + { + "column_name": "LINKSTO", + "description": "Name of the event table containing this itemid." + } + ], + "link": [ + { + "link_table": "chartevents", + "link_column": "ITEMID" + }, + { + "link_table": "inputevents_cv", + "link_column": "ITEMID" + }, + { + "link_table": "outputevents", + "link_column": "ITEMID" + } + ] + }, + { + "file_name": "chartevents", + "description": "chartevents stores all patient charted data during ICU stays, including vital signs, ventilator settings, lab values, and other clinical observations.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospital admission identifier." + }, + { + "column_name": "ICUSTAY_ID", + "description": "Unique ICU stay identifier." + }, + { + "column_name": "CHARTTIME", + "description": "Time the observation was made." + }, + { + "column_name": "ITEMID", + "description": "Identifier for the measurement type (e.g., heart rate)." + }, + { + "column_name": "VALUENUM", + "description": "Numeric value for the itemid, if applicable." + }, + { + "column_name": "VALUEUOM", + "description": "Unit of measurement for the value." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + }, + { + "link_table": "icustays", + "link_column": "ICUSTAY_ID" + }, + { + "link_table": "d_items", + "link_column": "ITEMID" + } + ] + }, + { + "file_name": "icustays", + "description": "Records ICU stays with admission and discharge times.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospital admission ID." + }, + { + "column_name": "ICUSTAY_ID", + "description": "Unique ICU stay ID." + }, + { + "column_name": "FIRST_CAREUNIT", + "description": "First ICU type during the stay, from TRANSFERS." + }, + { + "column_name": "LAST_CAREUNIT", + "description": "Last ICU type during the stay, from TRANSFERS." + }, + { + "column_name": "INTIME", + "description": "ICU admission date and time." + }, + { + "column_name": "OUTTIME", + "description": "ICU discharge date and time." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + } + ] + }, + { + "file_name": "inputevents_cv", + "description": "Records continuous infusions and intermittent drug administrations, including timing, components, and changes in delivery.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospital admission ID." + }, + { + "column_name": "ICUSTAY_ID", + "description": "Unique ICU stay ID." + }, + { + "column_name": "CHARTTIME", + "description": "Time of the input event." + }, + { + "column_name": "ITEMID", + "description": "ID for the administered drug or substance." + }, + { + "column_name": "AMOUNT", + "description": "Amount given to the patient." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + }, + { + "link_table": "icustays", + "link_column": "ICUSTAY_ID" + }, + { + "link_table": "d_items", + "link_column": "ITEMID" + } + ] + }, + { + "file_name": "outputevents", + "description": "Records patient outputs such as urine and drainage.", + "columns": [ + { + "column_name": "SUBJECT_ID", + "description": "Unique patient identifier." + }, + { + "column_name": "HADM_ID", + "description": "Unique hospital admission ID." + }, + { + "column_name": "ICUSTAY_ID", + "description": "Unique ICU stay ID." + }, + { + "column_name": "CHARTTIME", + "description": "Time of the output event." + }, + { + "column_name": "ITEMID", + "description": "ID for the type of measurement." + }, + { + "column_name": "VALUE", + "description": "Amount of substance at charttime." + } + ], + "link": [ + { + "link_table": "patients", + "link_column": "SUBJECT_ID" + }, + { + "link_table": "admissions", + "link_column": "HADM_ID" + }, + { + "link_table": "icustays", + "link_column": "ICUSTAY_ID" + }, + { + "link_table": "d_items", + "link_column": "ITEMID" + } + ] + }, + { + "file_name": "diagnoses_ccs_candidates", + "description": "Lists ICD-9 codes in CCS Level used for patient billing.", + "columns": [ + { + "column_name": "icd_code", + "description": "ICD diagnosis code." + }, + { + "column_name": "icd_version", + "description": "ICD version: 9 or 10. ICD-9 codes are numeric (sometimes with E or V), ICD-10 codes start with a letter." + }, + { + "column_name": "candidate", + "description": "Full description of the ICD code in CCS Level." + } + ], + "link": [] + }, + { + "file_name": "procedures_ccs_candidates", + "description": "Defines ICD procedure codes in CCS Level used for billing and identifying performed procedures.", + "columns": [ + { + "column_name": "icd_code", + "description": "ICD procedure code." + }, + { + "column_name": "icd_version", + "description": "ICD version: 9 (ICD-9) or 10 (ICD-10); decimals are optional." + }, + { + "column_name": "long_title", + "description": "Brief definition of the procedure code in CCS Level." + } + ], + "link": [] + }, + { + "file_name": "labevents_candidates", + "description": "Defines all lab measurement itemids used in MIMIC. Links lab events to item details, including fluid, category, and label. Most items map to LOINC codes for interoperability.", + "columns": [ + { + "column_name": "ITEMID", + "description": "Unique ID for each lab concept; links to labevents." + }, + { + "column_name": "LABEL", + "description": "Name of the lab concept for the itemid." + } + ], + "link": [] + }, + { + "file_name": "prescriptions_candidates", + "description": "Contains unique drug names prescribed to patients, used as candidate values for medication selection.", + "columns": [ + { + "column_name": "candidate", + "description": "As candidate column for choosing the correct value. Drug name." + } + ], + "link": [] + }, + { + "file_name": "transfers_candidates", + "description": "Contains unique careunit names from patient transfer events, used as candidate values for careunit selection.", + "columns": [ + { + "column_name": "candidate", + "description": "As candidate column for choosing the correct value." + } + ], + "link": [] + }, + { + "file_name": "microbiologyevents_candidates", + "description": "Contains unique microbiology test names, used as candidate values for microbiological event selection.", + "columns": [ + { + "column_name": "candidate", + "description": "As candidate column for choosing the correct value." + } + ], + "link": [] + } +] \ No newline at end of file diff --git a/MIMICIIIAgentBench/table_description/link_information.json b/MIMICIIIAgentBench/table_description/link_information.json new file mode 100644 index 0000000000000000000000000000000000000000..5269d5da8ef4e01c3d5ca1226af083bdcfe9d34b --- /dev/null +++ b/MIMICIIIAgentBench/table_description/link_information.json @@ -0,0 +1,6 @@ +{"table_name": "diagnoses_icd", "link_table": "d_icd_diagnoses", "link_column": ["ICD9_CODE"]} +{"table_name": "procedures_icd", "link_table": "d_icd_procedures", "link_column": ["ICD9_CODE"]} +{"table_name": "labevents", "link_table": "d_labitems", "link_column": ["ITEMID"]} +{"table_name": "chartevents", "link_table": "d_items", "link_column": ["ITEMID"]} +{"table_name": "inputevents_cv", "link_table": "d_items", "link_column": ["ITEMID"]} +{"table_name": "outputevents", "link_table": "d_items", "link_column": ["ITEMID"]} diff --git a/MIMICIIIAgentBench/table_description/shorten_description.json b/MIMICIIIAgentBench/table_description/shorten_description.json new file mode 100644 index 0000000000000000000000000000000000000000..af6a48da8df33b78d13e13f1f923beea5b0c9dd9 --- /dev/null +++ b/MIMICIIIAgentBench/table_description/shorten_description.json @@ -0,0 +1,24 @@ +{"file_name": "admissions", "description": "Contains details for each hospital admission, including timing, demographics, admission source, and discharge info. Each admission has a unique hadm_id.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier; links to PATIENTS table. Patients may have multiple admissions."}, {"column_name": "HADM_ID", "description": "Unique identifier for each hospital admission (1000000 - 1999999)."}, {"column_name": "ADMITTIME", "description": "Date and time of hospital admission."}, {"column_name": "ADMISSION_TYPE", "description": "Classifies admission urgency (e.g., elective, urgent, emergency)."}, {"column_name": "ADMISSION_LOCATION", "description": "Location of patient before hospital admission."}, {"column_name": "INSURANCE", "description": "Patient's insurance for this admission."}, {"column_name": "LANGUAGE", "description": "Patient's language for this admission."}, {"column_name": "MARITAL_STATUS", "description": "Patient's marital status for this admission."}, {"column_name": "ETHNICITY", "description": "Patient's ethnicity for this admission."}, {"column_name": "AGE", "description": "Patient's age for this admission.."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}]} +{"file_name": "d_icd_diagnoses", "description": "Lists ICD-9 diagnosis codes used for patient billing.", "columns": [{"column_name": "ICD9_CODE", "description": "ICD diagnosis code."}, {"column_name": "SHORT_TITLE", "description": "Short description of the ICD code."}, {"column_name": "LONG_TITLE", "description": "Full description of the ICD code."}], "link": [{"link_table": "diagnoses_icd", "link_column": "ICD9_CODE"}]} +{"file_name": "d_ccs_diagnoses", "description": "Lists ICD-9 diagnosis codes in CCS Level used for patient billing.", "columns": [{"column_name": "icd_code", "description": "ICD diagnosis code."}, {"column_name": "icd_version", "description": "ICD version: 9 or 10. ICD-9 codes are numeric (sometimes with E or V), ICD-10 codes start with a letter."}, {"column_name": "long_title", "description": "Full description of the ICD code in CCS Level."}], "link": [{"link_table": "diagnoses_icd", "link_column": "ICD9_CODE"}]} +{"file_name": "d_icd_procedures", "description": "Defines ICD procedure codes used for billing and identifying performed procedures.", "columns": [{"column_name": "ICD9_CODE", "description": "ICD procedure code."}, {"column_name": "SHORT_TITLE", "description": "Short description of the procedure code."}, {"column_name": "LONG_TITLE", "description": "Brief definition of the procedure code."}], "link": [{"link_table": "procedures_icd", "link_column": "ICD9_CODE"}]} +{"file_name": "d_ccs_procedures", "description": "Defines ICD procedure codes in CCS Level used for billing and identifying performed procedures.", "columns": [{"column_name": "icd_code", "description": "ICD procedure code."}, {"column_name": "icd_version", "description": "ICD version: 9 (ICD-9) or 10 (ICD-10); decimals are optional."}, {"column_name": "long_title", "description": "Brief definition of the procedure code in CCS Level."}], "link": [{"link_table": "procedures_icd", "link_column": "ICD9_CODE"}]} +{"file_name": "d_labitems", "description": "Defines all lab measurement itemids used in MIMIC. Links lab events to item details, including fluid, category, and label. Most items map to LOINC codes for interoperability.", "columns": [{"column_name": "ITEMID", "description": "Unique ID for each lab concept; links to labevents."}, {"column_name": "LABEL", "description": "Name of the lab concept for the itemid."}], "link": [{"link_table": "labevents", "link_column": "ITEMID"}]} +{"file_name": "diagnoses_icd", "description": "Lists all ICD-9 diagnoses billed to patients during hospital stays, assigned at discharge based on clinical notes.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospitalization identifier."}, {"column_name": "ICD9_CODE", "description": "ICD diagnosis code."}, {"column_name": "CHARTTIME", "description": "Time diagnosis was charted."}], "link": [{"link_table": "d_icd_diagnoses", "link_column": "ICD9_CODE"}]} +{"file_name": "labevents", "description": "Stores all lab test results for a patient, including hematology, blood gases, chemistry, and rare tests.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospitalization identifier."}, {"column_name": "ITEMID", "description": "Unique lab test concept identifier."}, {"column_name": "CHARTTIME", "description": "Time the lab test was charted or specimen collected."}, {"column_name": "VALUENUM", "description": "Lab test result as a numeric value."}, {"column_name": "VALUEUOM", "description": "Unit of measurement for the result."}], "link": [{"link_table": "d_labitems", "link_column": "ITEMID"}, {"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}]} +{"file_name": "microbiologyevents", "description": "Records microbiology tests, specimen details, organisms found for each patient sample.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospital admission ID."}, {"column_name": "CHARTTIME", "description": "Date and time the observation was charted."}, {"column_name": "SPEC_TYPE_DESC", "description": "Description of the specimen type."}, {"column_name": "ORG_NAME", "description": "Name of the organism grown, if any."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}]} +{"file_name": "patients", "description": "Stores patient information that does not change over time.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier; primary key."}, {"column_name": "GENDER", "description": "Patient's genotypical sex."}, {"column_name": "DOB", "description": "De-identified date of birth."}], "link": []} +{"file_name": "prescriptions", "description": "Contains prescribed medications, including drug names, codes (GSN, NDC), strength, dose, and administration route.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospitalization identifier."}, {"column_name": "STARTDATE", "description": "Medication start date."}, {"column_name": "STOPDATE", "description": "Medication stop date."}, {"column_name": "DRUG", "description": "Free-text medication name."}, {"column_name": "DOSE_VAL_RX", "description": "Prescribed dose amount."}, {"column_name": "DOSE_UNIT_RX", "description": "Dose unit of measurement."}, {"column_name": "ROUTE", "description": "Medication administration route."}], "link": []} +{"file_name": "procedures_icd", "description": "Records all hospital-billed procedures for patients using ICD-9 codes.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospitalization identifier."}, {"column_name": "CHARTTIME", "description": "Date of the procedure."}, {"column_name": "ICD9_CODE", "description": "ICD procedure code."}], "link": [{"link_table": "d_icd_procedures", "link_column": "ICD9_CODE"}]} +{"file_name": "transfers", "description": "Tracks patient locations during hospital stays.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospital admission ID."}, {"column_name": "EVENTTYPE", "description": "Type of transfer event: 'admit', 'transfer', or 'discharge'."}, {"column_name": "CAREUNIT", "description": "Type of unit or ward where patient is located."}, {"column_name": "INTIME", "description": "Date and time patient entered the care unit."}, {"column_name": "OUTTIME", "description": "Date and time patient left the care unit."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}]} +{"file_name": "d_items", "description": "Defines itemid concepts used in ICU event tables.", "columns": [{"column_name": "ITEMID", "description": "Unique identifier for each item."}, {"column_name": "LABEL", "description": "Name of the concept for the itemid."}, {"column_name": "LINKSTO", "description": "Name of the event table containing this itemid."}], "link": [{"link_table": "chartevents", "link_column": "ITEMID"}, {"link_table": "inputevents_cv", "link_column": "ITEMID"}, {"link_table": "outputevents", "link_column": "ITEMID"}]} +{"file_name": "chartevents", "description": "chartevents stores all patient charted data during ICU stays, including vital signs, ventilator settings, lab values, and other clinical observations.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospital admission identifier."}, {"column_name": "ICUSTAY_ID", "description": "Unique ICU stay identifier."}, {"column_name": "CHARTTIME", "description": "Time the observation was made."}, {"column_name": "ITEMID", "description": "Identifier for the measurement type (e.g., heart rate)."}, {"column_name": "VALUENUM", "description": "Numeric value for the itemid, if applicable."}, {"column_name": "VALUEUOM", "description": "Unit of measurement for the value."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}, {"link_table": "icustays", "link_column": "ICUSTAY_ID"}, {"link_table": "d_items", "link_column": "ITEMID"}]} +{"file_name": "icustays", "description": "Records ICU stays with admission and discharge times.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospital admission ID."}, {"column_name": "ICUSTAY_ID", "description": "Unique ICU stay ID."}, {"column_name": "FIRST_CAREUNIT", "description": "First ICU type during the stay, from TRANSFERS."}, {"column_name": "INTIME", "description": "ICU admission date and time."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}]} +{"file_name": "inputevents_cv", "description": "Records continuous infusions and intermittent drug administrations, including timing, components, and changes in delivery.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospital admission ID."}, {"column_name": "ICUSTAY_ID", "description": "Unique ICU stay ID."}, {"column_name": "CHARTTIME", "description": "Time of the input event."}, {"column_name": "ITEMID", "description": "ID for the administered drug or substance."}, {"column_name": "AMOUNT", "description": "Amount given to the patient."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}, {"link_table": "icustays", "link_column": "ICUSTAY_ID"}, {"link_table": "d_items", "link_column": "ITEMID"}]} +{"file_name": "outputevents", "description": "Records patient outputs such as urine and drainage.", "columns": [{"column_name": "SUBJECT_ID", "description": "Unique patient identifier."}, {"column_name": "HADM_ID", "description": "Unique hospital admission ID."}, {"column_name": "ICUSTAY_ID", "description": "Unique ICU stay ID."}, {"column_name": "CHARTTIME", "description": "Time of the output event."}, {"column_name": "ITEMID", "description": "ID for the type of measurement."}, {"column_name": "VALUE", "description": "Amount of substance at charttime."}], "link": [{"link_table": "patients", "link_column": "SUBJECT_ID"}, {"link_table": "admissions", "link_column": "HADM_ID"}, {"link_table": "icustays", "link_column": "ICUSTAY_ID"}, {"link_table": "d_items", "link_column": "ITEMID"}]} +{"file_name": "diagnoses_ccs_candidates", "description": "Lists ICD-9 codes in CCS Level used for patient billing.", "columns": [{"column_name": "icd_code", "description": "ICD diagnosis code."}, {"column_name": "icd_version", "description": "ICD version: 9. ICD-9 codes are numeric (sometimes with E or V)."}, {"column_name": "candidate", "description": "Full description of the ICD code in CCS Level."}], "link": []} +{"file_name": "procedures_ccs_candidates", "description": "Defines ICD procedure codes in CCS Level used for billing and identifying performed procedures.", "columns": [{"column_name": "icd_code", "description": "ICD procedure code."}, {"column_name": "icd_version", "description": "ICD version: 9 (ICD-9); decimals are optional."}, {"column_name": "long_title", "description": "Brief definition of the procedure code in CCS Level."}], "link": []} +{"file_name": "labevents_candidates", "description": "Defines all lab measurement itemids used in MIMIC. Links lab events to item details, including fluid, category, and label. Most items map to LOINC codes for interoperability.", "columns": [{"column_name": "ITEMID", "description": "Unique ID for each lab concept; links to labevents."}, {"column_name": "LABEL", "description": "Name of the lab concept for the itemid."}], "link": []} +{"file_name": "prescriptions_candidates", "description": "Contains unique drug names prescribed to patients, used as candidate values for medication selection.", "columns": [{"column_name": "candidate", "description": "As candidate column for choosing the correct value. Drug name."}], "link": []} +{"file_name": "transfers_candidates", "description": "Contains unique careunit names from patient transfer events, used as candidate values for careunit selection.", "columns": [{"column_name": "candidate", "description": "As candidate column for choosing the correct value."}], "link": []} +{"file_name": "microbiologyevents_candidates", "description": "Contains unique microbiology test names, used as candidate values for microbiological event selection.", "columns": [{"column_name": "candidate", "description": "As candidate column for choosing the correct value."}], "link": []} diff --git a/MIMICIVAgentBench/common/diagnoses_ccs_500.json b/MIMICIVAgentBench/common/diagnoses_ccs_500.json new file mode 100644 index 0000000000000000000000000000000000000000..4f9ba02494720f666eadf01f7a89b77d9efd0f45 --- /dev/null +++ b/MIMICIVAgentBench/common/diagnoses_ccs_500.json @@ -0,0 +1,42350 @@ +[ + { + "subject_id": 13762777, + "hadm_id": 22827736, + "prediction_time": "2174-05-02 14:24:00", + "task": "diagnoses_ccs", + "label": [ + { + "name": "Cancer of liver and intrahepatic bile duct", + "icd_code": "1550", + "icd_version": 9, + "seq_num": 1 + }, + { + "name": "Nausea and vomiting", + "icd_code": "78701", + "icd_version": 9, + "seq_num": 2 + }, + { + "name": "Essential hypertension", + "icd_code": "4019", + "icd_version": 9, + "seq_num": 3 + }, + { + "name": "Genitourinary symptoms and ill-defined conditions", + "icd_code": "78820", + "icd_version": 9, + "seq_num": 4 + }, + { + "name": "Heart valve disorders", + "icd_code": "V422", + "icd_version": 9, + "seq_num": 5 + }, + { + "name": "Conduction disorders", + "icd_code": "V4501", + "icd_version": 9, + "seq_num": 6 + }, + { + "name": "Congestive heart failure; nonhypertensive", + "icd_code": "4280", + "icd_version": 9, + "seq_num": 7 + }, + { + "name": "Coronary atherosclerosis and other heart disease", + "icd_code": "41400", + "icd_version": 9, + "seq_num": 8 + }, + { + "name": "Coronary atherosclerosis and other heart disease", + "icd_code": "V4581", + "icd_version": 9, + "seq_num": 9 + }, + { + "name": "Disorders of lipid metabolism", + "icd_code": "2724", + "icd_version": 9, + "seq_num": 10 + }, + { + "name": "Deficiency and other anemia", + "icd_code": "2859", + "icd_version": 9, + "seq_num": 11 + }, + { + "name": "Cancer; other and unspecified primary", + "icd_code": "V1089", + "icd_version": 9, + "seq_num": 12 + } + ] + }, + { + "subject_id": 19505049, + "hadm_id": 21468882, + "prediction_time": "2174-04-07 16:53:00", + "task": "diagnoses_ccs", + "label": [ + { + "name": "Secondary malignancies", + "icd_code": "1977", + "icd_version": 9, + "seq_num": 1 + }, + { + "name": "Phlebitis; thrombophlebitis and thromboembolism", + "icd_code": "4532", + "icd_version": 9, + "seq_num": 2 + }, + { + "name": "Fluid and electrolyte disorders", + "icd_code": "2761", + "icd_version": 9, + "seq_num": 3 + }, + { + "name": "Secondary malignancies", + "icd_code": "1974", + "icd_version": 9, + "seq_num": 4 + }, + { + "name": "Other gastrointestinal disorders", + "icd_code": "56409", + "icd_version": 9, + "seq_num": 5 + }, + { + "name": "Coagulation and hemorrhagic disorders", + "icd_code": "2874", + "icd_version": 9, + "seq_num": 6 + }, + { + "name": "Thyroid disorders", + "icd_code": "2449", + "icd_version": 9, + "seq_num": 7 + }, + { + "name": "Mood disorders", + "icd_code": "311", + "icd_version": 9, + "seq_num": 8 + }, + { + "name": "Screening and history of mental health and substance abuse codes", + "icd_code": "3051", + "icd_version": 9, + "seq_num": 9 + }, + { + "name": "Cardiac dysrhythmias", + "icd_code": "42731", + "icd_version": 9, + "seq_num": 10 + }, + { + "name": "Residual codes; unclassified", + "icd_code": "V8741", + "icd_version": 9, + "seq_num": 11 + }, + { + "name": "Cancer of bronchus; lung", + "icd_code": "V1011", + "icd_version": 9, + "seq_num": 12 + }, + { + "name": "Residual codes; unclassified", + "icd_code": "V4572", + "icd_version": 9, + "seq_num": 13 + }, + { + "name": "Residual codes; unclassified", + "icd_code": "V4576", + "icd_version": 9, + "seq_num": 14 + }, + { + "name": "Phlebitis; thrombophlebitis and thromboembolism", + "icd_code": "V1251", + "icd_version": 9, + "seq_num": 15 + }, + { + "name": "Other aftercare", + "icd_code": "V5861", + "icd_version": 9, + "seq_num": 16 + }, + { + "name": "Cancer of other GI organs; peritoneum", + "icd_code": "V1009", + "icd_version": 9, + "seq_num": 17 + } + ] + }, + { + "subject_id": 17332316, + "hadm_id": 22838789, + "prediction_time": "2165-12-26 08:23:00", + "task": "diagnoses_ccs", + "label": [ + { + "name": "Leukemias", + "icd_code": "20502", + "icd_version": 9, + "seq_num": 1 + }, + { + "name": "Respiratory failure; insufficiency; arrest (adult)", + "icd_code": "51881", + "icd_version": 9, + "seq_num": 2 + }, + { + "name": "Septicemia (except in labor)", + "icd_code": "99592", + "icd_version": 9, + "seq_num": 3 + }, + { + "name": "Acute and 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"category": "Chemistry" + }, + { + "name": "HCG, Urine, Qualitative", + "itemid": 51085, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Length of Urine Collection", + "itemid": 51087, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Methadone, Urine", + "itemid": 51090, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Opiate Screen, Urine", + "itemid": 51092, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Basophils", + "itemid": 51146, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Eosinophils", + "itemid": 51200, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hematocrit", + "itemid": 51221, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hemoglobin", + "itemid": 51222, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Lymphocytes", + "itemid": 51244, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 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"task": "labevents", + "label": [ + { + "name": "Absolute Lymphocyte Count", + "itemid": 51133, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Basophils", + "itemid": 51146, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Eosinophils", + "itemid": 51200, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hematocrit", + "itemid": 51221, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hemoglobin", + "itemid": 51222, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Lymphocytes", + "itemid": 51244, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 51248, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCV", + "itemid": 51250, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Monocytes", + "itemid": 51254, + "fluid": "Blood", + "category": 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"name": "Cholesterol, HDL", + "itemid": 50904, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Cholesterol, LDL, Calculated", + "itemid": 50905, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Cholesterol, Total", + "itemid": 50907, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Creatinine", + "itemid": 50912, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Estimated GFR (MDRD equation)", + "itemid": 50920, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "H", + "itemid": 50934, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "I", + "itemid": 50947, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Potassium", + "itemid": 50971, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Sodium", + "itemid": 50983, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Thyroid Stimulating Hormone", + "itemid": 50993, + "fluid": "Blood", + 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"name": "Glucose", + "itemid": 50931, + "fluid": "Blood", + "category": "Chemistry" + } + ] + }, + { + "subject_id": 16336676, + "prediction_time": "2183-04-05 06:29:00", + "task": "labevents", + "label": [ + { + "name": "Absolute Lymphocyte Count", + "itemid": 51133, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Basophils", + "itemid": 51146, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Eosinophils", + "itemid": 51200, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hematocrit", + "itemid": 51221, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hemoglobin", + "itemid": 51222, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Lymphocytes", + "itemid": 51244, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 51248, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + 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"name": "Hematocrit, Calculated", + "itemid": 50810, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Hemoglobin", + "itemid": 50811, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Intubated", + "itemid": 50812, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Lactate", + "itemid": 50813, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "pCO2", + "itemid": 50818, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "pH", + "itemid": 50820, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "pO2", + "itemid": 50821, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Potassium, Whole Blood", + "itemid": 50822, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Sodium, Whole Blood", + "itemid": 50824, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Ventilator", + "itemid": 50828, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": 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"fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Yeast", + "itemid": 51519, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Amphetamine Screen, Urine", + "itemid": 51071, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Barbiturate Screen, Urine", + "itemid": 51074, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Benzodiazepine Screen, Urine", + "itemid": 51075, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Cocaine, Urine", + "itemid": 51079, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Length of Urine Collection", + "itemid": 51087, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Methadone, Urine", + "itemid": 51090, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Opiate Screen, Urine", + "itemid": 51092, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Oxycodone", + "itemid": 51989, + "fluid": "Urine", + "category": 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"name": "Glucose", + "itemid": 50931, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "H", + "itemid": 50934, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "I", + "itemid": 50947, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Magnesium", + "itemid": 50960, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Phosphate", + "itemid": 50970, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Potassium", + "itemid": 50971, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Sodium", + "itemid": 50983, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Urea Nitrogen", + "itemid": 51006, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "L", + "itemid": 51678, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Blue Top Hold", + "itemid": 50887, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Absolute Lymphocyte Count", + "itemid": 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"name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCV", + "itemid": 51250, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Metamyelocytes", + "itemid": 51251, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Microcytes", + "itemid": 51252, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Monocytes", + "itemid": 51254, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Myelocytes", + "itemid": 51255, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Neutrophils", + "itemid": 51256, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Platelet Count", + "itemid": 51265, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Platelet Smear", + "itemid": 51266, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Poikilocytosis", + "itemid": 51267, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": 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"name": "Bilirubin, Total", + "itemid": 50885, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Chloride", + "itemid": 50902, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Creatinine", + "itemid": 50912, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Glucose", + "itemid": 50931, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Potassium", + "itemid": 50971, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Sodium", + "itemid": 50983, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Thyroid Stimulating Hormone", + "itemid": 50993, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Urea Nitrogen", + "itemid": 51006, + "fluid": "Blood", + "category": "Chemistry" + } + ] + }, + { + "subject_id": 19061870, + "prediction_time": "2158-03-27 17:59:00", + "task": "labevents", + "label": [ + { + "name": "% Hemoglobin A1c", + "itemid": 50852, + "fluid": "Blood", + "category": 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"name": "Specific Gravity", + "itemid": 51498, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Transitional Epithelial Cells", + "itemid": 51501, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Urine Appearance", + "itemid": 51506, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Urine Color", + "itemid": 51508, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Urine Mucous", + "itemid": 51512, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Urobilinogen", + "itemid": 51514, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "WBC", + "itemid": 51516, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "Yeast", + "itemid": 51519, + "fluid": "Urine", + "category": "Hematology" + }, + { + "name": "HCG, Urine, Qualitative", + "itemid": 51085, + "fluid": "Urine", + "category": "Chemistry" + }, + { + "name": "Length of Urine Collection", + "itemid": 51087, + "fluid": 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"name": "ARCH-1", + "itemid": 51564, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "HIV Screen", + "itemid": 53153, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Alanine Aminotransferase (ALT)", + "itemid": 50861, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Asparate Aminotransferase (AST)", + "itemid": 50878, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Cholesterol Ratio (Total/HDL)", + "itemid": 50903, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Cholesterol, HDL", + "itemid": 50904, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Cholesterol, Total", + "itemid": 50907, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Creatinine", + "itemid": 50912, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Estimated GFR (MDRD equation)", + "itemid": 50920, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "H", + "itemid": 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"fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Troponin T", + "itemid": 51003, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Urea Nitrogen", + "itemid": 51006, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Uric Acid", + "itemid": 51007, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "INR(PT)", + "itemid": 51237, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "PT", + "itemid": 51274, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "PTT", + "itemid": 51275, + "fluid": "Blood", + "category": "Hematology" + } + ] + }, + { + "subject_id": 14570725, + "prediction_time": "2128-12-11 10:39:00", + "task": "labevents", + "label": [ + { + "name": "INR(PT)", + "itemid": 51237, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "PT", + "itemid": 51274, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "PTT", + "itemid": 51275, + "fluid": "Blood", + 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"category": "Blood Gas" + }, + { + "name": "pCO2", + "itemid": 50818, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "pH", + "itemid": 50820, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "pO2", + "itemid": 50821, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Potassium, Whole Blood", + "itemid": 50822, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Sodium, Whole Blood", + "itemid": 50824, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Ventilator", + "itemid": 50828, + "fluid": "Blood", + "category": "Blood Gas" + }, + { + "name": "Specimen Type", + "itemid": 52033, + "fluid": "Blood", + "category": "Blood Gas" + } + ] + }, + { + "subject_id": 11883215, + "prediction_time": "2145-03-20 14:59:00", + "task": "labevents", + "label": [ + { + "name": "Hematocrit", + "itemid": 51221, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hemoglobin", + "itemid": 51222, + "fluid": 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"name": "PT", + "itemid": 51274, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "PTT", + "itemid": 51275, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Troponin T", + "itemid": 51003, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Basophils", + "itemid": 51146, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Eosinophils", + "itemid": 51200, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hematocrit", + "itemid": 51221, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hemoglobin", + "itemid": 51222, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Lymphocytes", + "itemid": 51244, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 51248, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCV", + "itemid": 51250, + 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"fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Ethanol", + "itemid": 50922, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Glucose", + "itemid": 50931, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Lipase", + "itemid": 50956, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Magnesium", + "itemid": 50960, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Potassium", + "itemid": 50971, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Protein, Total", + "itemid": 50976, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Salicylate", + "itemid": 50981, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Sodium", + "itemid": 50983, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Tricyclic Antidepressant Screen", + "itemid": 50999, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Urea Nitrogen", + "itemid": 51006, + "fluid": 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}, + { + "subject_id": 15973119, + "prediction_time": "2160-12-11 20:44:00", + "task": "labevents", + "label": [ + { + "name": "Absolute Lymphocyte Count", + "itemid": 51133, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Basophils", + "itemid": 51146, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Eosinophils", + "itemid": 51200, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hematocrit", + "itemid": 51221, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Hemoglobin", + "itemid": 51222, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Lymphocytes", + "itemid": 51244, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 51248, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCV", + "itemid": 51250, + "fluid": "Blood", + "category": "Hematology" + }, 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"fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Alanine Aminotransferase (ALT)", + "itemid": 50861, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Alkaline Phosphatase", + "itemid": 50863, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Anion Gap", + "itemid": 50868, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Asparate Aminotransferase (AST)", + "itemid": 50878, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Bicarbonate", + "itemid": 50882, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Bilirubin, Total", + "itemid": 50885, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Calcium, Total", + "itemid": 50893, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Chloride", + "itemid": 50902, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Creatinine", + "itemid": 50912, + "fluid": "Blood", + "category": "Chemistry" + }, + { + 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"fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 51248, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCV", + "itemid": 51250, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Monocytes", + "itemid": 51254, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Neutrophils", + "itemid": 51256, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Platelet Count", + "itemid": 51265, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "RDW", + "itemid": 51277, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Red Blood Cells", + "itemid": 51279, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "White Blood Cells", + "itemid": 51301, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Absolute Basophil Count", + "itemid": 52069, + "fluid": 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"name": "Asparate Aminotransferase (AST)", + "itemid": 50878, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Bicarbonate", + "itemid": 50882, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Bilirubin, Total", + "itemid": 50885, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Calcium, Total", + "itemid": 50893, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Chloride", + "itemid": 50902, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Creatinine", + "itemid": 50912, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Glucose", + "itemid": 50931, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Lactate Dehydrogenase (LD)", + "itemid": 50954, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Magnesium", + "itemid": 50960, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Phosphate", + "itemid": 50970, + "fluid": "Blood", + "category": 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"category": "Chemistry" + }, + { + "name": "Anion Gap", + "itemid": 50868, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Asparate Aminotransferase (AST)", + "itemid": 50878, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Bicarbonate", + "itemid": 50882, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Bilirubin, Total", + "itemid": 50885, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Calcium, Total", + "itemid": 50893, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Chloride", + "itemid": 50902, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Creatinine", + "itemid": 50912, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Estimated GFR (MDRD equation)", + "itemid": 50920, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Ferritin", + "itemid": 50924, + "fluid": "Blood", + "category": "Chemistry" + }, + { + "name": "Folate", + "itemid": 50925, 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51244, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Macrocytes", + "itemid": 51246, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCH", + "itemid": 51248, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCHC", + "itemid": 51249, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "MCV", + "itemid": 51250, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Metamyelocytes", + "itemid": 51251, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Microcytes", + "itemid": 51252, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Monocytes", + "itemid": 51254, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Myelocytes", + "itemid": 51255, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Neutrophils", + "itemid": 51256, + "fluid": "Blood", + "category": "Hematology" + }, + { + "name": "Ovalocytes", + "itemid": 51260, + "fluid": "Blood", 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