Datasets:
adding citation and description
Browse files
README.md
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@@ -21,10 +21,13 @@ experimental_conditions:
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- compound: D-glucose
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# Saldanha et al 2004: 10 g/l
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concentration_percent: 1
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configs:
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- config_name: hackett_2020
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description:
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default: true
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dataset_type: annotated_features
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metadata_fields: ["sample_id", "regulator_locus_tag", "regulator_symbol", "time", "mechanism", "restriction", "date", "strain"]
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- compound: D-glucose
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# Saldanha et al 2004: 10 g/l
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concentration_percent: 1
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doi: https://doi.org/10.15252/msb.20199174
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citation: >-
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Hackett, SR, Baltz, EA, Coram, M, Wranik, BJ, Kim, et al. 2020. Learning causal networks using inducible transcription factors and transcriptome-wide time series. Molecular Systems Biology.
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configs:
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- config_name: hackett_2020
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description: >-
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Microarray expression data comparing cells without estradiol inducer, which express a TF at a very low level and post-induction, which express the TF at a high level by 15-30 minutes post induction. Contains many time points. Cells were grown in minimal medium with glucose in continuous-flow chemostats. In most experiments growth was limited by phosphate limitation.
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default: true
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dataset_type: annotated_features
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metadata_fields: ["sample_id", "regulator_locus_tag", "regulator_symbol", "time", "mechanism", "restriction", "date", "strain"]
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