ChipYTY's picture
Add files using upload-large-folder tool
853e22b verified
# Copyright (c) MONAI Consortium
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Collection of the remote MMAR descriptors
See Also:
- https://docs.nvidia.com/clara/clara-train-sdk/pt/mmar.html
"""
from __future__ import annotations
import os
from typing import Any
__all__ = ["MODEL_DESC", "RemoteMMARKeys"]
class RemoteMMARKeys:
"""
Data keys used for loading MMAR.
ID must uniquely define an MMAR.
"""
ID = "id" # unique MMAR
NAME = "name" # MMAR name for readability
URL = "url" # remote location of the MMAR, see also: `monai.apps.mmars.mmars._get_ngc_url`
DOC = "doc" # documentation page of the remote model, see also: `monai.apps.mmars.mmars._get_ngc_doc_url`
FILE_TYPE = "file_type" # type of the compressed MMAR
HASH_TYPE = "hash_type" # hashing method for the compressed MMAR
HASH_VAL = "hash_val" # hashing value for the compressed MMAR
MODEL_FILE = "model_file" # within an MMAR folder, the relative path to the model file
CONFIG_FILE = "config_file" # within an MMAR folder, the relative path to the config file (for model config)
VERSION = "version" # version of the MMAR
MODEL_DESC: tuple[dict[Any, Any], ...] = (
{
RemoteMMARKeys.ID: "clara_pt_spleen_ct_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_spleen_ct_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_prostate_mri_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_prostate_mri_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_covid19_ct_lesion_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_covid19_ct_lesion_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_covid19_3d_ct_classification_1",
RemoteMMARKeys.NAME: "clara_pt_covid19_3d_ct_classification",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_covid19_ct_lung_annotation_1",
RemoteMMARKeys.NAME: "clara_pt_covid19_ct_lung_annotation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_fed_learning_brain_tumor_mri_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_fed_learning_brain_tumor_mri_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "server", "best_FL_global_model.pt"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_pathology_metastasis_detection_1",
RemoteMMARKeys.NAME: "clara_pt_pathology_metastasis_detection",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_brain_mri_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_brain_mri_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_brain_mri_segmentation_t1c_1",
RemoteMMARKeys.NAME: "clara_pt_brain_mri_segmentation_t1c",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_liver_and_tumor_ct_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_liver_and_tumor_ct_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_pancreas_and_tumor_ct_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_pancreas_and_tumor_ct_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_brain_mri_annotation_t1c_1",
RemoteMMARKeys.NAME: "clara_pt_brain_mri_annotation_t1c",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_spleen_ct_annotation_1",
RemoteMMARKeys.NAME: "clara_pt_spleen_ct_annotation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_deepgrow_3d_annotation_1",
RemoteMMARKeys.NAME: "clara_pt_deepgrow_3d_annotation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_deepgrow_2d_annotation_1",
RemoteMMARKeys.NAME: "clara_pt_deepgrow_2d_annotation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_covid19_ct_lung_segmentation_1",
RemoteMMARKeys.NAME: "clara_pt_covid19_ct_lung_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 1,
},
{
RemoteMMARKeys.ID: "clara_pt_unetr_ct_btcv_segmentation",
RemoteMMARKeys.NAME: "clara_pt_unetr_ct_btcv_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 4.1,
},
{
RemoteMMARKeys.ID: "clara_pt_chest_xray_classification",
RemoteMMARKeys.NAME: "clara_pt_chest_xray_classification",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models", "model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 4.1,
},
{
RemoteMMARKeys.ID: "clara_pt_self_supervised_learning_segmentation",
RemoteMMARKeys.NAME: "clara_pt_self_supervised_learning_segmentation",
RemoteMMARKeys.FILE_TYPE: "zip",
RemoteMMARKeys.HASH_TYPE: "md5",
RemoteMMARKeys.HASH_VAL: None,
RemoteMMARKeys.MODEL_FILE: os.path.join("models_2gpu", "best_metric_model.pt"),
RemoteMMARKeys.CONFIG_FILE: os.path.join("config", "config_train.json"),
RemoteMMARKeys.VERSION: 4.1,
},
)