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from __future__ import annotations |
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from typing import TYPE_CHECKING |
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from monai.config import IgniteInfo, KeysCollection |
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from monai.engines.utils import IterationEvents |
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from monai.transforms import Decollated |
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from monai.utils import min_version, optional_import |
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Events, _ = optional_import("ignite.engine", IgniteInfo.OPT_IMPORT_VERSION, min_version, "Events") |
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if TYPE_CHECKING: |
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from ignite.engine import Engine |
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else: |
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Engine, _ = optional_import("ignite.engine", IgniteInfo.OPT_IMPORT_VERSION, min_version, "Engine") |
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class DecollateBatch: |
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""" |
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Ignite handler to execute the `decollate batch` logic for `engine.state.batch` and `engine.state.output`. |
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Typical usage is to set `decollate=False` in the engine and execute some postprocessing logic first |
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then decollate the batch, otherwise, engine will decollate batch before the postprocessing. |
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Args: |
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event: expected EVENT to attach the handler, should be "MODEL_COMPLETED" or "ITERATION_COMPLETED". |
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default to "MODEL_COMPLETED". |
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detach: whether to detach the tensors. scalars tensors will be detached into number types |
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instead of torch tensors. |
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decollate_batch: whether to decollate `engine.state.batch` of ignite engine. |
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batch_keys: if `decollate_batch=True`, specify the keys of the corresponding items to decollate |
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in `engine.state.batch`, note that it will delete other keys not specified. if None, |
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will decollate all the keys. it replicates the scalar values to every item of the decollated list. |
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decollate_output: whether to decollate `engine.state.output` of ignite engine. |
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output_keys: if `decollate_output=True`, specify the keys of the corresponding items to decollate |
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in `engine.state.output`, note that it will delete other keys not specified. if None, |
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will decollate all the keys. it replicates the scalar values to every item of the decollated list. |
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allow_missing_keys: don't raise exception if key is missing. |
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""" |
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def __init__( |
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self, |
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event: str = "MODEL_COMPLETED", |
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detach: bool = True, |
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decollate_batch: bool = True, |
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batch_keys: KeysCollection | None = None, |
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decollate_output: bool = True, |
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output_keys: KeysCollection | None = None, |
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allow_missing_keys: bool = False, |
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): |
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event = event.upper() |
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if event not in ("MODEL_COMPLETED", "ITERATION_COMPLETED"): |
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raise ValueError("event should be `MODEL_COMPLETED` or `ITERATION_COMPLETED`.") |
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self.event = event |
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self.batch_transform = ( |
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Decollated(keys=batch_keys, detach=detach, allow_missing_keys=allow_missing_keys) |
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if decollate_batch |
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else None |
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) |
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self.output_transform = ( |
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Decollated(keys=output_keys, detach=detach, allow_missing_keys=allow_missing_keys) |
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if decollate_output |
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else None |
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) |
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def attach(self, engine: Engine) -> None: |
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""" |
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Args: |
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engine: Ignite Engine, it can be a trainer, validator or evaluator. |
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""" |
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if self.event == "MODEL_COMPLETED": |
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engine.add_event_handler(IterationEvents.MODEL_COMPLETED, self) |
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else: |
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engine.add_event_handler(Events.ITERATION_COMPLETED, self) |
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def __call__(self, engine: Engine) -> None: |
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""" |
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Args: |
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engine: Ignite Engine, it can be a trainer, validator or evaluator. |
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""" |
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if self.batch_transform is not None and isinstance(engine.state.batch, (list, dict)): |
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engine.state.batch = self.batch_transform(engine.state.batch) |
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if self.output_transform is not None and isinstance(engine.state.output, (list, dict)): |
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engine.state.output = self.output_transform(engine.state.output) |
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