row_id
string | series_id
string | timepoint_h
int64 | organism
string | strain_id
string | drug_a
string | drug_b
string | stress_index
float64 | baseline_mic_a_mg_L
float64 | baseline_mic_b_mg_L
float64 | mic_a_mg_L
float64 | mic_b_mg_L
float64 | a_resistant_cutoff_mg_L
float64 | b_susceptible_floor_mg_L
float64 | b_sensitivity_fold_change
float64 | media
string | assay_method
string | source_type
string | collateral_sensitivity_signal
int64 | earliest_collateral_sensitivity
int64 | notes
string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ABXCT003-TR-0001
|
S1
| 0
|
Escherichia coli
|
EC-CLIN101
|
ciprofloxacin
|
gentamicin
| 0.1
| 0.25
| 2
| 0.25
| 2
| 4
| 0.5
| 1
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 0
| 0
|
baseline
|
ABXCT003-TR-0002
|
S1
| 12
|
Escherichia coli
|
EC-CLIN101
|
ciprofloxacin
|
gentamicin
| 0.9
| 0.25
| 2
| 4
| 1
| 4
| 0.5
| 2
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 1
| 1
|
A crosses resistant B drops 2x
|
ABXCT003-TR-0003
|
S1
| 24
|
Escherichia coli
|
EC-CLIN101
|
ciprofloxacin
|
gentamicin
| 0.9
| 0.25
| 2
| 8
| 0.5
| 4
| 0.5
| 4
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 1
| 0
|
pattern persists
|
ABXCT003-TR-0004
|
S2
| 0
|
Klebsiella pneumoniae
|
KP-CLIN220
|
meropenem
|
amikacin
| 0.1
| 0.5
| 4
| 0.5
| 4
| 8
| 1
| 1
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 0
| 0
|
baseline
|
ABXCT003-TR-0005
|
S2
| 24
|
Klebsiella pneumoniae
|
KP-CLIN220
|
meropenem
|
amikacin
| 0.9
| 0.5
| 4
| 16
| 2
| 8
| 1
| 2
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 1
| 1
|
A crosses B drops 2x
|
ABXCT003-TR-0006
|
S2
| 48
|
Klebsiella pneumoniae
|
KP-CLIN220
|
meropenem
|
amikacin
| 0.9
| 0.5
| 4
| 32
| 1
| 8
| 1
| 4
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 1
| 0
|
persists
|
ABXCT003-TR-0007
|
S3
| 0
|
Pseudomonas aeruginosa
|
PA-CLIN330
|
ciprofloxacin
|
tobramycin
| 0.1
| 0.25
| 1
| 0.25
| 1
| 4
| 0.25
| 1
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 0
| 0
|
baseline
|
ABXCT003-TR-0008
|
S3
| 24
|
Pseudomonas aeruginosa
|
PA-CLIN330
|
ciprofloxacin
|
tobramycin
| 0.9
| 0.25
| 1
| 4
| 1
| 4
| 0.25
| 1
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 0
| 0
|
B did not drop
|
ABXCT003-TR-0009
|
S4
| 0
|
Escherichia coli
|
EC-CLIN600
|
ciprofloxacin
|
gentamicin
| 0.1
| 0.25
| 2
| 0.25
| 2
| 4
| 0.5
| 1
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 0
| 0
|
baseline
|
ABXCT003-TR-0010
|
S4
| 24
|
Escherichia coli
|
EC-CLIN600
|
ciprofloxacin
|
gentamicin
| 0.3
| 0.25
| 2
| 4
| 0.5
| 4
| 0.5
| 4
|
CAMHB
|
MIC_broth_microdilution
|
simulated
| 0
| 0
|
stress low even though pattern exists
|
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