scripts/train_v14.py

#!/usr/bin/env python3
"""
PENTABRID V14 — LoRA TRAINER (27B, attention-only, ZeRO-2)
==========================================================
Locked config: LoRA r16 / alpha16, attention-only, 1 epoch, LR 1.5e-5 cosine +
3% warmup, MAX_SEQ_LEN 8192, bf16, DeepSpeed ZeRO-2 (NOT ZeRO-3: no NVLink on
these A100s). Loss is masked to the answer only (the prompt is not trained on).

** SMOKE FIRST **  Launch once with  SMOKE=1  -> trains ~20 steps on 64 rows to
prove it loads, fits in memory, and steps without crashing. Only then do the full
run. This is the single riskiest step (future transformers/PEFT API + Qwen3.6
chat template), so we validate cheaply before committing hours.

Three things to VERIFY on the smoke (Claude will check the smoke log with you):
  1. target_modules names are right for Qwen3.6 (q_proj/k_proj/v_proj/o_proj).
  2. the chat template doesn't double-wrap the <think> tags already in `output`.
  3. no CUDA OOM at seq 8192 (if OOM: drop MAXLEN to 6144, or set LOAD_4BIT=1).

USAGE (via train_v14.sbatch; do not run by hand on the login node):
    SMOKE=1 torchrun --standalone --nproc_per_node=2 train_v14.py   # smoke
    torchrun --standalone --nproc_per_node=2 train_v14.py           # full
"""
import os
import torch
from transformers import (AutoModelForCausalLM, AutoTokenizer,
                          TrainingArguments, Trainer)
from peft import LoraConfig, get_peft_model
from datasets import load_dataset

MODEL_DIR = os.environ.get("MODEL_DIR", "/home/adnanagha/pentabrid/base_models/Qwen3.6-27B")
DATA      = os.environ.get("DATA",      "/home/adnanagha/pentabrid/scripts/v14_train_final.jsonl")
OUT       = os.environ.get("OUT",       "/home/adnanagha/pentabrid/runs/V14_lora")
MAXLEN    = int(os.environ.get("MAXLEN", "8192"))
SMOKE     = os.environ.get("SMOKE", "") not in ("", "0", "false")
RESUME    = bool(os.environ.get("RESUME"))
if os.path.isdir(OUT) and os.listdir(OUT) and not RESUME:
    raise SystemExit("REFUSING to overwrite non-empty OUT dir: " + OUT + "  (use a new OUT=... or set RESUME=1)")

# DeepSpeed ZeRO-2 (full frozen base kept on each GPU; only optimizer/grads sharded)
DS_CONFIG = {
    "bf16": {"enabled": True},
    "zero_optimization": {
        "stage": 2,
        "overlap_comm": True,
        "contiguous_gradients": True,
        "reduce_bucket_size": 2e8,
        "allgather_bucket_size": 2e8,
    },
    "gradient_accumulation_steps": "auto",
    "train_micro_batch_size_per_gpu": "auto",
    "gradient_clipping": "auto",
}

tok = AutoTokenizer.from_pretrained(MODEL_DIR)
if tok.pad_token is None:
    tok.pad_token = tok.eos_token


def _ids(out):
    """Return a plain list[int] of token ids from apply_chat_template, regardless
    of whether this transformers version returns a list, a tensor, or an Encoding/
    BatchEncoding (the latter triggers an Arrow OverflowError if passed through)."""
    if hasattr(out, "input_ids"):           # BatchEncoding / Encoding
        out = out.input_ids
    if hasattr(out, "ids"):                  # tokenizers.Encoding
        out = out.ids
    if hasattr(out, "tolist"):               # tensor / numpy
        out = out.tolist()
    if out and isinstance(out[0], list):     # nested [[...]] -> first row
        out = out[0]
    return [int(t) for t in out]


def to_example(row):
    """Tokenize one row; mask the prompt so loss falls only on the answer."""
    user = row["instruction"] + (("\n\n" + row["input"]) if row.get("input") else "")
    msgs = [{"role": "user", "content": user}]
    prompt_ids = _ids(tok.apply_chat_template(msgs, add_generation_prompt=True, tokenize=True))
    full_ids = _ids(tok.apply_chat_template(
        msgs + [{"role": "assistant", "content": row["output"]}],
        add_generation_prompt=False, tokenize=True))
    input_ids = full_ids[:MAXLEN]
    labels = list(input_ids)
    for i in range(min(len(prompt_ids), len(labels))):
        labels[i] = -100
    return {"input_ids": input_ids, "labels": labels, "attention_mask": [1] * len(input_ids)}


ds = load_dataset("json", data_files=DATA, split="train")
if SMOKE:
    ds = ds.select(range(min(64, len(ds))))
ds = ds.map(to_example, remove_columns=ds.column_names, desc="tokenizing")


def collate(batch):
    m = max(len(b["input_ids"]) for b in batch)
    pad = lambda s, v: s + [v] * (m - len(s))
    return {
        "input_ids":      torch.tensor([pad(b["input_ids"], tok.pad_token_id) for b in batch]),
        "labels":         torch.tensor([pad(b["labels"], -100) for b in batch]),
        "attention_mask": torch.tensor([pad(b["attention_mask"], 0) for b in batch]),
    }


load_kwargs = dict(torch_dtype=torch.bfloat16)
if os.environ.get("LOAD_4BIT"):
    from transformers import BitsAndBytesConfig
    load_kwargs["quantization_config"] = BitsAndBytesConfig(
        load_in_4bit=True, bnb_4bit_compute_dtype=torch.bfloat16, bnb_4bit_quant_type="nf4")

model = AutoModelForCausalLM.from_pretrained(MODEL_DIR, **load_kwargs)
model.config.use_cache = False
model.gradient_checkpointing_enable()
model.enable_input_require_grads()   # required for PEFT + gradient checkpointing

lora = LoraConfig(
    r=16, lora_alpha=int(os.environ.get("ALPHA", "16")), lora_dropout=0.0, bias="none", task_type="CAUSAL_LM",
    target_modules=["q_proj", "k_proj", "v_proj", "o_proj"],   # attention-only
)
model = get_peft_model(model, lora)
model.print_trainable_parameters()

args = TrainingArguments(
    output_dir=OUT,
    num_train_epochs=1,
    max_steps=(20 if SMOKE else -1),
    per_device_train_batch_size=1,
    gradient_accumulation_steps=16,
    learning_rate=1.5e-5,
    lr_scheduler_type="cosine",
    warmup_ratio=0.03,
    bf16=True,
    logging_steps=5,
    save_strategy="steps",
    save_steps=200,
    save_total_limit=4,
    eval_strategy="no",
    report_to="none",
    gradient_checkpointing=True,
    deepspeed=DS_CONFIG,
)

trainer = Trainer(model=model, args=args, train_dataset=ds, data_collator=collate)
trainer.train(resume_from_checkpoint=RESUME)
trainer.save_model(OUT)     # saves the LoRA adapter (not the full model)
tok.save_pretrained(OUT)
print(f"DONE -> LoRA adapter saved at {OUT}")